MS007731 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTGAGGATGAGTGTTCACTCCCGAACCATGTTGCCTCCTGGGGCGTCAAGGAAGCGAAAAGAGGTTGAGTCGTTTATGAAGCCGTTGGCTCCGAAAGCTGGCGGCGGCGGCGGCGACGGGGACTCAGTCTCGTCGAATCGGCTTCTAGCCGGCTACTTGGCTCACGAGTTTCTCAGCAAAGGCACTCTATTTGGGGAGAAGTACGAGCCGGCTCGAAGCGAAGCCGTTTCCCTGGCTGGCGAGTGTAAGAGGACGAAGCCGGAAGCCGCGCCGAGCATCAAAAATGAAAATCAGAGTTATGCTGAGGTGGCAAGCATCTTGAAGATGGATGGGGCCCACCTGCCTGGAATTGTTAACCCGGCCCAGCTGGCTCGGTGGATCAAAATG CTGAGGATGAGTGTTCACTCCCGAACCATGTTGCCTCCTGGGGCGTCAAGGAAGCGAAAAGAGGTTGAGTCGTTTATGAAGCCGTTGGCTCCGAAAGCTGGCGGCGGCGGCGGCGACGGGGACTCAGTCTCGTCGAATCGGCTTCTAGCCGGCTACTTGGCTCACGAGTTTCTCAGCAAAGGCACTCTATTTGGGGAGAAGTACGAGCCGGCTCGAAGCGAAGCCGTTTCCCTGGCTGGCGAGTGTAAGAGGACGAAGCCGGAAGCCGCGCCGAGCATCAAAAATGAAAATCAGAGTTATGCTGAGGTGGCAAGCATCTTGAAGATGGATGGGGCCCACCTGCCTGGAATTGTTAACCCGGCCCAGCTGGCTCGGTGGATCAAAATG CTGAGGATGAGTGTTCACTCCCGAACCATGTTGCCTCCTGGGGCGTCAAGGAAGCGAAAAGAGGTTGAGTCGTTTATGAAGCCGTTGGCTCCGAAAGCTGGCGGCGGCGGCGGCGACGGGGACTCAGTCTCGTCGAATCGGCTTCTAGCCGGCTACTTGGCTCACGAGTTTCTCAGCAAAGGCACTCTATTTGGGGAGAAGTACGAGCCGGCTCGAAGCGAAGCCGTTTCCCTGGCTGGCGAGTGTAAGAGGACGAAGCCGGAAGCCGCGCCGAGCATCAAAAATGAAAATCAGAGTTATGCTGAGGTGGCAAGCATCTTGAAGATGGATGGGGCCCACCTGCCTGGAATTGTTAACCCGGCCCAGCTGGCTCGGTGGATCAAAATG LRMSVHSRTMLPPGASRKRKEVESFMKPLAPKAGGGGGDGDSVSSNRLLAGYLAHEFLSKGTLFGEKYEPARSEAVSLAGECKRTKPEAAPSIKNENQSYAEVASILKMDGAHLPGIVNPAQLARWIKM Homology
BLAST of MS007731 vs. NCBI nr
Match: XP_023547636.1 (uncharacterized protein LOC111806520 [Cucurbita pepo subsp. pepo] >XP_023547637.1 uncharacterized protein LOC111806520 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184.5 bits (467), Expect = 5.8e-43 Identity = 106/138 (76.81%), Postives = 111/138 (80.43%), Query Frame = 0
BLAST of MS007731 vs. NCBI nr
Match: XP_022964143.1 (uncharacterized protein LOC111464257 [Cucurbita moschata]) HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42 Identity = 103/135 (76.30%), Postives = 110/135 (81.48%), Query Frame = 0
BLAST of MS007731 vs. NCBI nr
Match: KAG6593829.1 (hypothetical protein SDJN03_13305, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42 Identity = 103/135 (76.30%), Postives = 110/135 (81.48%), Query Frame = 0
BLAST of MS007731 vs. NCBI nr
Match: KAG6574904.1 (hypothetical protein SDJN03_25543, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 183.0 bits (463), Expect = 1.7e-42 Identity = 107/140 (76.43%), Postives = 111/140 (79.29%), Query Frame = 0
BLAST of MS007731 vs. NCBI nr
Match: KAG7026157.1 (hypothetical protein SDJN02_12656, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 181.8 bits (460), Expect = 3.8e-42 Identity = 102/135 (75.56%), Postives = 110/135 (81.48%), Query Frame = 0
BLAST of MS007731 vs. ExPASy TrEMBL
Match: A0A6J1HJY7 (uncharacterized protein LOC111464257 OS=Cucurbita moschata OX=3662 GN=LOC111464257 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 6.3e-43 Identity = 103/135 (76.30%), Postives = 110/135 (81.48%), Query Frame = 0
BLAST of MS007731 vs. ExPASy TrEMBL
Match: A0A6J1KXG9 (uncharacterized protein LOC111499092 OS=Cucurbita maxima OX=3661 GN=LOC111499092 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.4e-42 Identity = 104/136 (76.47%), Postives = 109/136 (80.15%), Query Frame = 0
BLAST of MS007731 vs. ExPASy TrEMBL
Match: A0A6J1H3W4 (uncharacterized protein LOC111460190 OS=Cucurbita moschata OX=3662 GN=LOC111460190 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 5.3e-42 Identity = 102/142 (71.83%), Postives = 108/142 (76.06%), Query Frame = 0
BLAST of MS007731 vs. ExPASy TrEMBL
Match: A0A5A7UAS9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00360 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 4.1e-34 Identity = 87/126 (69.05%), Postives = 96/126 (76.19%), Query Frame = 0
BLAST of MS007731 vs. ExPASy TrEMBL
Match: A0A0A0LI65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173040 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.6e-33 Identity = 87/126 (69.05%), Postives = 93/126 (73.81%), Query Frame = 0
BLAST of MS007731 vs. TAIR 10
Match: AT5G44060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 92.0 bits (227), Expect = 3.6e-19 Identity = 48/94 (51.06%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of MS007731 vs. TAIR 10
Match: AT3G23440.1 (embryo sac development arrest 6 ) HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18 Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 0
BLAST of MS007731 vs. TAIR 10
Match: AT1G04000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 84.0 bits (206), Expect = 9.9e-17 Identity = 48/109 (44.04%), Postives = 73/109 (66.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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