MS007587 (gene) Bitter gourd (TR) v1

Overview


Name	MS007587
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold836: 145446 .. 145583 (+)
RNA-Seq Expression	MS007587
Synteny	MS007587

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGAGGCTTGGTGAGTATCTCTACCAAAACTCTGAACTTGTTTGAATGCTCGGAAGCTCTTATTCAAGTTAGAGCAAACTCTTGCAGTTTTGTTCTCACCTTTGTTGAAATCAAAGATCCCAAGCTTGGAAGCGTT

mRNA sequence

TTTGGAGGCTTGGTGAGTATCTCTACCAAAACTCTGAACTTGTTTGAATGCTCGGAAGCTCTTATTCAAGTTAGAGCAAACTCTTGCAGTTTTGTTCTCACCTTTGTTGAAATCAAAGATCCCAAGCTTGGAAGCGTT

Coding sequence (CDS)

TTTGGAGGCTTGGTGAGTATCTCTACCAAAACTCTGAACTTGTTTGAATGCTCGGAAGCTCTTATTCAAGTTAGAGCAAACTCTTGCAGTTTTGTTCTCACCTTTGTTGAAATCAAAGATCCCAAGCTTGGAAGCGTT

Protein sequence

FGGLVSISTKTLNLFECSEALIQVRANSCSFVLTFVEIKDPKLGSV

Homology

[Close]

BLAST of MS007587 vs. NCBI nr
Match: XP_031738083.1 (uncharacterized protein LOC116402658 [Cucumis sativus])

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-04
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 1  FGGLVSISTKTLNLFECSEALIQVRANSCSFVLTFVEIKDPKLGSV 47
          FGG + I+T+TLNL  CSEA IQV+ N C FVL+  EI D K G++
Sbjct: 41 FGGFIKIATETLNLTNCSEARIQVKRNLCGFVLSTNEISDHKRGNI 86

The following BLAST results are available for this feature:

BLAST of MS007587 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738083.1	1.1e-04	56.52	uncharacterized protein LOC116402658 [Cucumis sativus]	[more]

BLAST of MS007587 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS007587 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS007587 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007587.1	MS007587.1	mRNA