MS007573 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAATATATGGAAACGAATAACAATGGCACAGATTTTGGTGGATCGAGATCTCGGAAGATGAAACTGAAGAGCCTGAAGACGAGAGACGACATGTCGGGTGTAGATCACGAAGAAGATTACCACACAGGAGTCCCGGCATCAGTGCCCTTCGTGTGGGAGTCTGAGCCGGGCACTCCCAAGAACAAGGACAAGGAGAAGGAGAAGAAGGACAAGTTTGACGATGATGGCGGAGTCGTCTCTCCTCTCACGCCTCCACCTTCGTACTTCTCTCCCTCTCCGAGACACAGACACAGCAGGCCCCTCAGCCTCAGGAATAATAGCAAGTCCTCCTCCAGAACCAACTTCCTCAACAATGTCTTCCGCAAGCTTTCTGTGAAGGCTGCCAGTCTGCAGCCTCCATCCCTGCCTTCTTCTTCCTCCTCGTCATCCAGCTCGTCGTTGTCATCGTCCACGATGACAACGCCGACCAGCTCCAGGAGGGAAAGAGGGAGGAGACTGTCGTTCGAGTGGAAACTGGATGATCAAGAGGAGGAGGAAGAGGAAGAGGAGGAGACAAATAATGAAGAATCACCAGTTTCTACTTTGTTCTTTGGGCGACGAGTAAATGGTCAAGGCTGCTGTCCCAAATTGGTGAAGGTGTTCTCCAGGGATGTTAAT AAATATATGGAAACGAATAACAATGGCACAGATTTTGGTGGATCGAGATCTCGGAAGATGAAACTGAAGAGCCTGAAGACGAGAGACGACATGTCGGGTGTAGATCACGAAGAAGATTACCACACAGGAGTCCCGGCATCAGTGCCCTTCGTGTGGGAGTCTGAGCCGGGCACTCCCAAGAACAAGGACAAGGAGAAGGAGAAGAAGGACAAGTTTGACGATGATGGCGGAGTCGTCTCTCCTCTCACGCCTCCACCTTCGTACTTCTCTCCCTCTCCGAGACACAGACACAGCAGGCCCCTCAGCCTCAGGAATAATAGCAAGTCCTCCTCCAGAACCAACTTCCTCAACAATGTCTTCCGCAAGCTTTCTGTGAAGGCTGCCAGTCTGCAGCCTCCATCCCTGCCTTCTTCTTCCTCCTCGTCATCCAGCTCGTCGTTGTCATCGTCCACGATGACAACGCCGACCAGCTCCAGGAGGGAAAGAGGGAGGAGACTGTCGTTCGAGTGGAAACTGGATGATCAAGAGGAGGAGGAAGAGGAAGAGGAGGAGACAAATAATGAAGAATCACCAGTTTCTACTTTGTTCTTTGGGCGACGAGTAAATGGTCAAGGCTGCTGTCCCAAATTGGTGAAGGTGTTCTCCAGGGATGTTAAT AAATATATGGAAACGAATAACAATGGCACAGATTTTGGTGGATCGAGATCTCGGAAGATGAAACTGAAGAGCCTGAAGACGAGAGACGACATGTCGGGTGTAGATCACGAAGAAGATTACCACACAGGAGTCCCGGCATCAGTGCCCTTCGTGTGGGAGTCTGAGCCGGGCACTCCCAAGAACAAGGACAAGGAGAAGGAGAAGAAGGACAAGTTTGACGATGATGGCGGAGTCGTCTCTCCTCTCACGCCTCCACCTTCGTACTTCTCTCCCTCTCCGAGACACAGACACAGCAGGCCCCTCAGCCTCAGGAATAATAGCAAGTCCTCCTCCAGAACCAACTTCCTCAACAATGTCTTCCGCAAGCTTTCTGTGAAGGCTGCCAGTCTGCAGCCTCCATCCCTGCCTTCTTCTTCCTCCTCGTCATCCAGCTCGTCGTTGTCATCGTCCACGATGACAACGCCGACCAGCTCCAGGAGGGAAAGAGGGAGGAGACTGTCGTTCGAGTGGAAACTGGATGATCAAGAGGAGGAGGAAGAGGAAGAGGAGGAGACAAATAATGAAGAATCACCAGTTTCTACTTTGTTCTTTGGGCGACGAGTAAATGGTCAAGGCTGCTGTCCCAAATTGGTGAAGGTGTTCTCCAGGGATGTTAAT KYMETNNNGTDFGGSRSRKMKLKSLKTRDDMSGVDHEEDYHTGVPASVPFVWESEPGTPKNKDKEKEKKDKFDDDGGVVSPLTPPPSYFSPSPRHRHSRPLSLRNNSKSSSRTNFLNNVFRKLSVKAASLQPPSLPSSSSSSSSSSLSSSTMTTPTSSRRERGRRLSFEWKLDDQEEEEEEEEETNNEESPVSTLFFGRRVNGQGCCPKLVKVFSRDVN Homology
BLAST of MS007573 vs. NCBI nr
Match: XP_022154855.1 (histone-lysine N-methyltransferase SETD1B-like [Momordica charantia]) HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110 Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of MS007573 vs. NCBI nr
Match: XP_038894794.1 (uncharacterized protein LOC120083212 [Benincasa hispida] >XP_038894795.1 uncharacterized protein LOC120083212 [Benincasa hispida]) HSP 1 Score: 166.4 bits (420), Expect = 2.8e-37 Identity = 119/217 (54.84%), Postives = 146/217 (67.28%), Query Frame = 0
BLAST of MS007573 vs. NCBI nr
Match: XP_022949317.1 (uncharacterized protein LOC111452704 [Cucurbita moschata]) HSP 1 Score: 162.9 bits (411), Expect = 3.1e-36 Identity = 122/218 (55.96%), Postives = 142/218 (65.14%), Query Frame = 0
BLAST of MS007573 vs. NCBI nr
Match: KAG6607361.1 (hypothetical protein SDJN03_00703, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 161.4 bits (407), Expect = 8.9e-36 Identity = 120/218 (55.05%), Postives = 141/218 (64.68%), Query Frame = 0
BLAST of MS007573 vs. NCBI nr
Match: KAG7037033.1 (hypothetical protein SDJN02_00654, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 161.0 bits (406), Expect = 1.2e-35 Identity = 121/218 (55.50%), Postives = 140/218 (64.22%), Query Frame = 0
BLAST of MS007573 vs. ExPASy TrEMBL
Match: A0A6J1DKU3 (histone-lysine N-methyltransferase SETD1B-like OS=Momordica charantia OX=3673 GN=LOC111022013 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 7.0e-111 Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of MS007573 vs. ExPASy TrEMBL
Match: A0A6J1GBP3 (uncharacterized protein LOC111452704 OS=Cucurbita moschata OX=3662 GN=LOC111452704 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.5e-36 Identity = 122/218 (55.96%), Postives = 142/218 (65.14%), Query Frame = 0
BLAST of MS007573 vs. ExPASy TrEMBL
Match: A0A6J1K5W9 (uncharacterized protein LOC111492604 OS=Cucurbita maxima OX=3661 GN=LOC111492604 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 2.8e-35 Identity = 120/218 (55.05%), Postives = 141/218 (64.68%), Query Frame = 0
BLAST of MS007573 vs. ExPASy TrEMBL
Match: A0A6J1I3P2 (uncharacterized protein LOC111469381 OS=Cucurbita maxima OX=3661 GN=LOC111469381 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 3.4e-33 Identity = 114/197 (57.87%), Postives = 129/197 (65.48%), Query Frame = 0
BLAST of MS007573 vs. ExPASy TrEMBL
Match: A0A0A0LYC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533640 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 5.8e-33 Identity = 105/210 (50.00%), Postives = 138/210 (65.71%), Query Frame = 0
BLAST of MS007573 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 6.9e-10 Identity = 53/130 (40.77%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of MS007573 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 4.3e-04 Identity = 33/98 (33.67%), Postives = 48/98 (48.98%), Query Frame = 0
BLAST of MS007573 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 5.6e-04 Identity = 54/154 (35.06%), Postives = 76/154 (49.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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