MS007568 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTAAATTTGGGATGCAGGTGGCAGCCGCCGGAAGAAGAGGGCTGGGTCAGGGTGGGCCTGGATCGTCGCCGCCGCGGTGCGCGTCAAAGTGCGGGAATTGCACGCCGTGCAAGCCGGTTCATGTGGCGGTGCCGGTGCCGCCGGGAACTCCGGTGACTGCGGACTACTACCCCGAAGCCTGGAGATGCAAATGCAGGAACAAGCTGTACATGCCC GTTAAATTTGGGATGCAGGTGGCAGCCGCCGGAAGAAGAGGGCTGGGTCAGGGTGGGCCTGGATCGTCGCCGCCGCGGTGCGCGTCAAAGTGCGGGAATTGCACGCCGTGCAAGCCGGTTCATGTGGCGGTGCCGGTGCCGCCGGGAACTCCGGTGACTGCGGACTACTACCCCGAAGCCTGGAGATGCAAATGCAGGAACAAGCTGTACATGCCC GTTAAATTTGGGATGCAGGTGGCAGCCGCCGGAAGAAGAGGGCTGGGTCAGGGTGGGCCTGGATCGTCGCCGCCGCGGTGCGCGTCAAAGTGCGGGAATTGCACGCCGTGCAAGCCGGTTCATGTGGCGGTGCCGGTGCCGCCGGGAACTCCGGTGACTGCGGACTACTACCCCGAAGCCTGGAGATGCAAATGCAGGAACAAGCTGTACATGCCC VKFGMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP Homology
BLAST of MS007568 vs. NCBI nr
Match: XP_022154900.1 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Momordica charantia]) HSP 1 Score: 149.8 bits (377), Expect = 8.8e-33 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of MS007568 vs. NCBI nr
Match: KAF3964493.1 (hypothetical protein CMV_011221 [Castanea mollissima]) HSP 1 Score: 115.2 bits (287), Expect = 2.4e-22 Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of MS007568 vs. NCBI nr
Match: XP_031385039.1 (uncharacterized protein LOC116198909 [Punica granatum]) HSP 1 Score: 114.0 bits (284), Expect = 5.4e-22 Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of MS007568 vs. NCBI nr
Match: OWM66639.1 (hypothetical protein CDL15_Pgr010290 [Punica granatum]) HSP 1 Score: 114.0 bits (284), Expect = 5.4e-22 Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of MS007568 vs. NCBI nr
Match: PKI54670.1 (hypothetical protein CRG98_024955 [Punica granatum]) HSP 1 Score: 114.0 bits (284), Expect = 5.4e-22 Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of MS007568 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 5.0e-23 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of MS007568 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.9e-18 Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of MS007568 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.0e-15 Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of MS007568 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 6.0e-08 Identity = 26/51 (50.98%), Postives = 30/51 (58.82%), Query Frame = 0
BLAST of MS007568 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 6.0e-08 Identity = 26/51 (50.98%), Postives = 30/51 (58.82%), Query Frame = 0
BLAST of MS007568 vs. ExPASy TrEMBL
Match: A0A6J1DKY2 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111022045 PE=3 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 4.3e-33 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of MS007568 vs. ExPASy TrEMBL
Match: A0A6A4PWJ8 (Epidermal patterning factor-like protein OS=Lupinus albus OX=3870 GN=Lal_00025374 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.6e-22 Identity = 50/58 (86.21%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of MS007568 vs. ExPASy TrEMBL
Match: A0A6P8CS74 (Epidermal patterning factor-like protein OS=Punica granatum OX=22663 GN=LOC116198909 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.6e-22 Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of MS007568 vs. ExPASy TrEMBL
Match: A0A218W295 (Epidermal patterning factor-like protein OS=Punica granatum OX=22663 GN=CDL15_Pgr010290 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.6e-22 Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of MS007568 vs. ExPASy TrEMBL
Match: A0A2I0JFJ7 (Epidermal patterning factor-like protein OS=Punica granatum OX=22663 GN=CRG98_024955 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.6e-22 Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of MS007568 vs. TAIR 10
Match: AT2G30370.1 (allergen-related ) HSP 1 Score: 107.8 bits (268), Expect = 3.6e-24 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of MS007568 vs. TAIR 10
Match: AT2G30370.2 (allergen-related ) HSP 1 Score: 107.8 bits (268), Expect = 3.6e-24 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of MS007568 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 92.0 bits (227), Expect = 2.0e-19 Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of MS007568 vs. TAIR 10
Match: AT3G22820.1 (allergen-related ) HSP 1 Score: 83.6 bits (205), Expect = 7.2e-17 Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of MS007568 vs. TAIR 10
Match: AT1G80133.1 (unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 4.4e-06 Identity = 21/53 (39.62%), Postives = 29/53 (54.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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