MS007551 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAACGGTGTTTTTTTTTTCCGCTCCTGTTCCACAGAAATCGATTGGCGAAAGGATTGCAATTGACCCATAATCATTTGGGGAATCTTCAACTTGTTGCACAATATTTGACAATCCTTGGGAGTTTGGCACTTGCTCTACATGACACTGTGCAGGCCAGAGAGATATTGAGATCATCTTTAACATTGGCAAAGAAACTCTATGACATCCCTACTCAGATATGGGTACTTTCAGTTTTAACAAGTATGTATATGATATACATCCTTCCTAATTACTATAACATCATAGTGCAATAATATTTTGATAGCGAGAATGAAATAACACATGCTGGTAGCAACTGTTTCATAACCTCCTTTTTACCTCCATATTGAAATAAAGTGATTTATTATATATGTATCATATGTATTATGTATAGCTTTATACCAAGAATTGGGTGAAAAGGGAAATGAGATGGAGAATGCGGAATATCAAAGTAAAAAGGCAGATGATCTGCAAAAGAGACTGGCCGATGCGCATTCATCCATTCATCACATCGAATTAGTAAGACATTCATGTTGCTCTGTTGTTTTGATGATTGGCTACAGATATTTCTTCCTATTTATTGTGTTTCCCCTATCGTTGTGGTGTATTTAGATTGACAAAGTACGGCTTGAAATTCAGCAACTCAAGGAGGTTGACATCAAGCGTGCAATAGGTGGCCCCTCCCTGGGAGTTAATCTTGATATACCAGAATCCGTTGGTGTGTCTGTTTCATTGCCGACTTCATCACTGAAGCTTGTGGATGTGGATACAGGAAGACGTGGAAAGAGGAAACTT CAACGGTGTTTTTTTTTTCCGCTCCTGTTCCACAGAAATCGATTGGCGAAAGGATTGCAATTGACCCATAATCATTTGGGGAATCTTCAACTTGTTGCACAATATTTGACAATCCTTGGGAGTTTGGCACTTGCTCTACATGACACTGTGCAGGCCAGAGAGATATTGAGATCATCTTTAACATTGGCAAAGAAACTCTATGACATCCCTACTCAGATATGGGTACTTTCAGTTTTAACAACTTTATACCAAGAATTGGGTGAAAAGGGAAATGAGATGGAGAATGCGGAATATCAAAGTAAAAAGGCAGATGATCTGCAAAAGAGACTGGCCGATGCGCATTCATCCATTCATCACATCGAATTAATTGACAAAGTACGGCTTGAAATTCAGCAACTCAAGGAGGTTGACATCAAGCGTGCAATAGGTGGCCCCTCCCTGGGAGTTAATCTTGATATACCAGAATCCGTTGGTGTGTCTGTTTCATTGCCGACTTCATCACTGAAGCTTGTGGATGTGGATACAGGAAGACGTGGAAAGAGGAAACTT CAACGGTGTTTTTTTTTTCCGCTCCTGTTCCACAGAAATCGATTGGCGAAAGGATTGCAATTGACCCATAATCATTTGGGGAATCTTCAACTTGTTGCACAATATTTGACAATCCTTGGGAGTTTGGCACTTGCTCTACATGACACTGTGCAGGCCAGAGAGATATTGAGATCATCTTTAACATTGGCAAAGAAACTCTATGACATCCCTACTCAGATATGGGTACTTTCAGTTTTAACAACTTTATACCAAGAATTGGGTGAAAAGGGAAATGAGATGGAGAATGCGGAATATCAAAGTAAAAAGGCAGATGATCTGCAAAAGAGACTGGCCGATGCGCATTCATCCATTCATCACATCGAATTAATTGACAAAGTACGGCTTGAAATTCAGCAACTCAAGGAGGTTGACATCAAGCGTGCAATAGGTGGCCCCTCCCTGGGAGTTAATCTTGATATACCAGAATCCGTTGGTGTGTCTGTTTCATTGCCGACTTCATCACTGAAGCTTGTGGATGTGGATACAGGAAGACGTGGAAAGAGGAAACTT QRCFFFPLLFHRNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLADAHSSIHHIELIDKVRLEIQQLKEVDIKRAIGGPSLGVNLDIPESVGVSVSLPTSSLKLVDVDTGRRGKRKL Homology
BLAST of MS007551 vs. NCBI nr
Match: XP_022158435.1 (sister chromatid cohesion protein SCC4 [Momordica charantia]) HSP 1 Score: 325.5 bits (833), Expect = 3.0e-85 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of MS007551 vs. NCBI nr
Match: XP_023521217.1 (sister chromatid cohesion protein SCC4 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521218.1 sister chromatid cohesion protein SCC4 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 315.1 bits (806), Expect = 4.0e-82 Identity = 164/172 (95.35%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of MS007551 vs. NCBI nr
Match: KAG6607383.1 (Sister chromatid cohesion protein SCC4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 315.1 bits (806), Expect = 4.0e-82 Identity = 164/172 (95.35%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of MS007551 vs. NCBI nr
Match: KAG7037052.1 (hypothetical protein SDJN02_00673, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 315.1 bits (806), Expect = 4.0e-82 Identity = 164/172 (95.35%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of MS007551 vs. NCBI nr
Match: XP_023524546.1 (sister chromatid cohesion protein SCC4-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 315.1 bits (806), Expect = 4.0e-82 Identity = 164/172 (95.35%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of MS007551 vs. ExPASy Swiss-Prot
Match: Q9FGN7 (Sister chromatid cohesion protein SCC4 OS=Arabidopsis thaliana OX=3702 GN=SCC4 PE=1 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-55 Identity = 116/176 (65.91%), Postives = 143/176 (81.25%), Query Frame = 0
BLAST of MS007551 vs. ExPASy TrEMBL
Match: A0A6J1DVU1 (sister chromatid cohesion protein SCC4 OS=Momordica charantia OX=3673 GN=LOC111024925 PE=3 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of MS007551 vs. ExPASy TrEMBL
Match: A0A6J1GBA4 (sister chromatid cohesion protein SCC4 OS=Cucurbita moschata OX=3662 GN=LOC111452599 PE=3 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 2.0e-82 Identity = 164/172 (95.35%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of MS007551 vs. ExPASy TrEMBL
Match: A0A6J1KHQ8 (sister chromatid cohesion protein SCC4 OS=Cucurbita maxima OX=3661 GN=LOC111493351 PE=3 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 5.7e-82 Identity = 163/172 (94.77%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of MS007551 vs. ExPASy TrEMBL
Match: A0A5D3CHS2 (MAU2 chromatid cohesion factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00010 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 9.7e-74 Identity = 155/172 (90.12%), Postives = 162/172 (94.19%), Query Frame = 0
BLAST of MS007551 vs. ExPASy TrEMBL
Match: A0A5A7UEF7 (MAU2 chromatid cohesion factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G00010 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 9.7e-74 Identity = 155/172 (90.12%), Postives = 162/172 (94.19%), Query Frame = 0
BLAST of MS007551 vs. TAIR 10
Match: AT5G51340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 217.6 bits (553), Expect = 8.2e-57 Identity = 116/176 (65.91%), Postives = 143/176 (81.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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