MS007300 (gene) Bitter gourd (TR) v1

Overview


Name	MS007300
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein RALF-like 33
Location	scaffold25: 2107377 .. 2107739 (-)
RNA-Seq Expression	MS007300
Synteny	MS007300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGGCCGGATTCCATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTGTGGTCTTCACCTGCTCCTCAACCGCCGTTCACGGCGGCCTCGGGATCCACCACAGCCTCGCATGGATTCCGGACCAATCGTCCTGCAAGGGCTCCATAGCAGAGTGCTTCGGCGGCGAGGAGTTCGAATTTGATTCGGAAATCAGCCGCCGCATCCTGGCCACCAGCCAGTACATCAGCTACGGCGCTCTGAAGAGGAACACTGTGCCGTGCTCTAGACGCGGCGCCTCCTATTACAACTGCCAGCCTGGAGCTCAAGCCAATCCCTACGGTCGTGGCTGCAGCGCCATCACGAGGTGCAGGAGT

mRNA sequence

ATGGCAATGGCCGGATTCCATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTGTGGTCTTCACCTGCTCCTCAACCGCCGTTCACGGCGGCCTCGGGATCCACCACAGCCTCGCATGGATTCCGGACCAATCGTCCTGCAAGGGCTCCATAGCAGAGTGCTTCGGCGGCGAGGAGTTCGAATTTGATTCGGAAATCAGCCGCCGCATCCTGGCCACCAGCCAGTACATCAGCTACGGCGCTCTGAAGAGGAACACTGTGCCGTGCTCTAGACGCGGCGCCTCCTATTACAACTGCCAGCCTGGAGCTCAAGCCAATCCCTACGGTCGTGGCTGCAGCGCCATCACGAGGTGCAGGAGT

Coding sequence (CDS)

ATGGCAATGGCCGGATTCCATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTGTGGTCTTCACCTGCTCCTCAACCGCCGTTCACGGCGGCCTCGGGATCCACCACAGCCTCGCATGGATTCCGGACCAATCGTCCTGCAAGGGCTCCATAGCAGAGTGCTTCGGCGGCGAGGAGTTCGAATTTGATTCGGAAATCAGCCGCCGCATCCTGGCCACCAGCCAGTACATCAGCTACGGCGCTCTGAAGAGGAACACTGTGCCGTGCTCTAGACGCGGCGCCTCCTATTACAACTGCCAGCCTGGAGCTCAAGCCAATCCCTACGGTCGTGGCTGCAGCGCCATCACGAGGTGCAGGAGT

Protein sequence

MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCRS

Homology

[Close]

BLAST of MS007300 vs. NCBI nr
Match: XP_022150733.1 (protein RALF-like 33 [Momordica charantia])

HSP 1 Score: 246.5 bits (628), Expect = 1.2e-61
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60
           MAMAGFHSPT FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE
Sbjct: 1   MAMAGFHSPT-FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 120

[Close]

BLAST of MS007300 vs. NCBI nr
Match: XP_038889183.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 238.8 bits (608), Expect = 2.4e-59
Identity = 112/121 (92.56%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60
           MAMAGF+SPTFFLICAAVFV+F+CSSTAVH GLGIHHSLAWIP+QS+CKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFVIFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120
           FEFDSEI+RRILATSQYISYGAL+RNTVPCSRRGASYYNCQPGAQANPY RGCSAITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of MS007300 vs. NCBI nr
Match: XP_022966015.1 (protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 9.2e-59
Identity = 112/121 (92.56%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60
           MAMAGF+S TFFLICAAVFVVF+CSSTAVHGGLGIHHSL WIP+QS+CKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGAL+RNTVPCSRRGASYYNCQPGAQANPY RGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of MS007300 vs. NCBI nr
Match: XP_022937540.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 233.8 bits (595), Expect = 7.8e-58
Identity = 111/121 (91.74%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60
           MAMAGF+S TFFLICAAVFVVF+CSSTAVHGGLGI HSL WIP+QS+CKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGAL+RNTVPCSRRGASYYNCQPGAQANPY RGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of MS007300 vs. NCBI nr
Match: KAG6586247.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230.3 bits (586), Expect = 8.6e-57
Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 3   MAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFE 62
           MAGF+S TFFLICAAVFVVF+CSSTAVHGGLGI HSL WIP+QS+CKG+IAECFGGEEFE
Sbjct: 1   MAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEEFE 60

Query: 63  FDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCRS 122
           FDSEISRRILATSQYISYGAL+RNTVPCSRRGASYYNCQPGAQANPY RGCSAITRCRS
Sbjct: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCRS 119

[Close]

BLAST of MS007300 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.4e-30
Identity = 72/116 (62.07%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 10  TFFLICAAVFVVFTCSSTAVHGGLGIH-HSLAWI---PDQSSCKGSIAECFGGEEFEFDS 69
           T FL    + VVF  SS  V  G       +AW     + S C GSIAEC G EE E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 70  EISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCRS 122
           EI+RRILAT++YISY +LKRN+VPCSRRGASYYNCQ GAQANPY RGCS I RCRS
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of MS007300 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.4e-30
Identity = 62/83 (74.70%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 41  WIPDQSSCKGSIAEC---FGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASY 100
           ++P +S C G+IAEC      EEFE DSEI+RRILAT++YISYGAL+RNTVPCSRRGASY
Sbjct: 33  FVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASY 92

Query: 101 YNCQPGAQANPYGRGCSAITRCR 121
           YNC+ GAQANPY RGCSAITRCR
Sbjct: 93  YNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of MS007300 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-29
Identity = 67/114 (58.77%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 9   PTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFG-GEEFEFDSEI 68
           P+  ++C  +   F   S A  G  G +  +        CKGSI EC    EEFE DSE 
Sbjct: 4   PSGLILCVLIGAFFI--SMAAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSES 63

Query: 69  SRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCRS 122
           +RRILAT +YISYGAL++N+VPCSRRGASYYNC+PGAQANPY RGCSAITRCRS
Sbjct: 64  NRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of MS007300 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.1e-28
Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 43  PDQSSCKGSIAEC-------------FG----GEEFEFDSEISRRILATSQYISYGALKR 102
           P ++ C+G+IAEC             +G    GEEFE DSEI+RRILAT +YISYGAL+R
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 103 NTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 121
           NT+PCSRRGASYYNC+ GAQANPY RGCSAITRCR
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of MS007300 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-27
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 46  SSCKGSIAECFG-GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGA 105
           S C GSIAEC    EE EFDS+ISRRILA  +YISYGA++RN+VPCSRRGASYYNCQ GA
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGA 102

Query: 106 QANPYGRGCSAITRCR 121
           QANPY RGCS ITRCR
Sbjct: 103 QANPYSRGCSTITRCR 118

[Close]

BLAST of MS007300 vs. ExPASy TrEMBL
Match: A0A6J1DA82 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 5.6e-62
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60
           MAMAGFHSPT FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE
Sbjct: 1   MAMAGFHSPT-FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 120

[Close]

BLAST of MS007300 vs. ExPASy TrEMBL
Match: A0A6J1HQE4 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.5e-59
Identity = 112/121 (92.56%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60
           MAMAGF+S TFFLICAAVFVVF+CSSTAVHGGLGIHHSL WIP+QS+CKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGAL+RNTVPCSRRGASYYNCQPGAQANPY RGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of MS007300 vs. ExPASy TrEMBL
Match: A0A6J1FH12 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.8e-58
Identity = 111/121 (91.74%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60
           MAMAGF+S TFFLICAAVFVVF+CSSTAVHGGLGI HSL WIP+QS+CKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGAL+RNTVPCSRRGASYYNCQPGAQANPY RGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of MS007300 vs. ExPASy TrEMBL
Match: A0A0A0LFW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.5e-57
Identity = 107/121 (88.43%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60
           MAMAGF+SPTFFLICAAVF++F+CSST VH GLGI HSLAWIP+QS+CKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120
           FEFDSEI+RRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY RGC+AITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of MS007300 vs. ExPASy TrEMBL
Match: A0A5A7TYI2 (Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00530 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.0e-55
Identity = 105/121 (86.78%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60
           MAMAGF+SPTFFLI AAVF++F+CSSTAVH G+GI +SLAWIP+QS+CKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120
           FEFDSEI+RRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY RGC+AITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of MS007300 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 131.0 bits (328), Expect = 6.6e-31
Identity = 72/116 (62.07%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 10  TFFLICAAVFVVFTCSSTAVHGGLGIH-HSLAWI---PDQSSCKGSIAECFGGEEFEFDS 69
           T FL    + VVF  SS  V  G       +AW     + S C GSIAEC G EE E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 70  EISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCRS 122
           EI+RRILAT++YISY +LKRN+VPCSRRGASYYNCQ GAQANPY RGCS I RCRS
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of MS007300 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 131.0 bits (328), Expect = 6.6e-31
Identity = 62/83 (74.70%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 41  WIPDQSSCKGSIAEC---FGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASY 100
           ++P +S C G+IAEC      EEFE DSEI+RRILAT++YISYGAL+RNTVPCSRRGASY
Sbjct: 33  FVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASY 92

Query: 101 YNCQPGAQANPYGRGCSAITRCR 121
           YNC+ GAQANPY RGCSAITRCR
Sbjct: 93  YNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of MS007300 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 125.2 bits (313), Expect = 3.6e-29
Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 43  PDQSSCKGSIAEC-------------FG----GEEFEFDSEISRRILATSQYISYGALKR 102
           P ++ C+G+IAEC             +G    GEEFE DSEI+RRILAT +YISYGAL+R
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 103 NTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 121
           NT+PCSRRGASYYNC+ GAQANPY RGCSAITRCR
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of MS007300 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 46  SSCKGSIAECFG-GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGA 105
           S C GSIAEC    EE EFDS+ISRRILA  +YISYGA++RN+VPCSRRGASYYNCQ GA
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGA 102

Query: 106 QANPYGRGCSAITRCR 121
           QANPY RGCS ITRCR
Sbjct: 103 QANPYSRGCSTITRCR 118

[Close]

BLAST of MS007300 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 79.0 bits (193), Expect = 3.0e-15
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 57  GGEEFEFDSEISRRILATSQ-YISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSA 116
           G  ++  DSE +RR LA  + YISYGAL++N VPCSRRG SYY+C+   +ANPY RGCS 
Sbjct: 42  GELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSV 101

Query: 117 ITRC 120
           IT C
Sbjct: 102 ITHC 105

The following BLAST results are available for this feature:

BLAST of MS007300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150733.1	1.2e-61	99.17	protein RALF-like 33 [Momordica charantia]	[more]
XP_038889183.1	2.4e-59	92.56	protein RALF-like 33 [Benincasa hispida]	[more]
XP_022966015.1	9.2e-59	92.56	protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cu...	[more]
XP_022937540.1	7.8e-58	91.74	protein RALF-like 33 [Cucurbita moschata]	[more]
KAG6586247.1	8.6e-57	91.60	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS007300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRY3	9.4e-30	62.07	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q8L9P8	9.4e-30	74.70	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q945T0	2.7e-29	58.77	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9LUS7	5.1e-28	65.26	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q9MA62	1.5e-27	77.63	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of MS007300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DA82	5.6e-62	99.17	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1	[more]
A0A6J1HQE4	4.5e-59	92.56	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1	[more]
A0A6J1FH12	3.8e-58	91.74	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1	[more]
A0A0A0LFW9	5.5e-57	88.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1	[more]
A0A5A7TYI2	3.0e-55	86.78	Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of MS007300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02900.1	6.6e-31	62.07	rapid alkalinization factor 1	[more]
AT4G15800.1	6.6e-31	74.70	ralf-like 33	[more]
AT3G16570.1	3.6e-29	65.26	rapid alkalinization factor 23	[more]
AT3G05490.1	1.1e-28	77.63	ralf-like 22	[more]
AT2G33775.1	3.0e-15	59.38	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 59..120 e-value: 2.4E-30 score: 105.3
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 6..121
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 6..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007300.1	MS007300.1	mRNA