MS007205 (gene) Bitter gourd (TR) v1

Overview
NameMS007205
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein
Locationscaffold25: 1435225 .. 1436736 (-)
RNA-Seq ExpressionMS007205
SyntenyMS007205
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGATCCGTCGGAATCGGCGTCGCCGGCGTGGGCCGAGCTGACGCACGAGTGCCTGACCAACATCGTGTCGCGGCTGAGCGTGGAGCAGCGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGTTCCGCGCCGCCACCGACTCCTCTCTCTTCTCCGAGTTCGACCTCGAACCCCGATTCGACTCGGCGCCCACCGAGTCACCGGCCTGGTGGTCGCCCGAGTTCCAGACCAAAATCGATTCCATGCTCCGATCGGTCCTCGATTGGAGCCATGGATCTCTCTCCCTTATTCGGATCAGACACTGCTCCGATCTCTCCCTTCATCTCGTCCCTCAAAGGTAATTAATTTTTAATTCTATTATAATTCTCTTATCTATTCTTTCTTTTCACTCAGGAAACACAGTTTTTTATATAGCTTGTGAATTTTGATTTGTGATAGTTTTTGATCTATTAGATCTGTAATCGCAATTTACAGTATTCTATACTATCAAAATCATGTCTTCTAAACAATAATTTGTTGAAAATTGTGTCTTTCCTCTCTTCTAGACATGATTTACTTGTAAAACTACCATACTTTTGTTGTTACTTTTCGAATTTTCCTACCTTTCTAATCTTTCTAGACGTAATTATATTAAAAAAAAAAAAGTTTCAAAAGTAGGTTCACATAACAAATTCAATGAAATTGTTATGAGAATGATGGGGCTATTTTGATAGTTTTGAAATGTGTTTGATTGTAAATCTTGTATGAACTTTTAGCCCTTCATATGGGTCTGAGTATTACATACTCTAATTTGATTCAGTGGTTCAAAGGGAACTTGGTTCCCTCTGGTTTAGCTATTATTTTGTGATCCTCGATCTTTGCATCTATTTGGTGGGATTAGTTGAGGTGTGTGTAAATGAGTTTGATCCCTCACAAAAGGGGAATTGATGGATTTTAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACAGATAAATCAATGGCTAAGATCGCTCTTGGTTGCCAAAAGCTCCGGGAAGTCGACATCAGCTACTGTTATGAAATCTCCCACGAATCTTTGGCGTTAATCGGCAGGCATTGTCCAAATATAAAGACTCTAAAACGGAACTTTTTCAACACTCTAGATCCTTCCCAACACACGGGAATTGTCCCCGAAGATTATCTAAATGCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAGTTCATGCCCAACTTGGAGCACCTTGAACTCTGTTTCTCTAAACTAACAGCTAAAGCCCTTAGTTTGATCTGTGAAGGATGTCCAAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGCGATATAGCGAATGCTACTACAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATACCGAGGTCGGTCTTTCACACAGAGAGGTATGGTCATTGGAGGCTGTATGACGAGAGGTTCCAAACGGATGTTTTCCGAATT

mRNA sequence

ATGACAGATCCGTCGGAATCGGCGTCGCCGGCGTGGGCCGAGCTGACGCACGAGTGCCTGACCAACATCGTGTCGCGGCTGAGCGTGGAGCAGCGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGTTCCGCGCCGCCACCGACTCCTCTCTCTTCTCCGAGTTCGACCTCGAACCCCGATTCGACTCGGCGCCCACCGAGTCACCGGCCTGGTGGTCGCCCGAGTTCCAGACCAAAATCGATTCCATGCTCCGATCGGTCCTCGATTGGAGCCATGGATCTCTCTCCCTTATTCGGATCAGACACTGCTCCGATCTCTCCCTTCATCTCGTCCCTCAAAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACAGATAAATCAATGGCTAAGATCGCTCTTGGTTGCCAAAAGCTCCGGGAAGTCGACATCAGCTACTGTTATGAAATCTCCCACGAATCTTTGGCGTTAATCGGCAGGCATTGTCCAAATATAAAGACTCTAAAACGGAACTTTTTCAACACTCTAGATCCTTCCCAACACACGGGAATTGTCCCCGAAGATTATCTAAATGCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAGTTCATGCCCAACTTGGAGCACCTTGAACTCTGTTTCTCTAAACTAACAGCTAAAGCCCTTAGTTTGATCTGTGAAGGATGTCCAAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGCGATATAGCGAATGCTACTACAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATACCGAGGTCGGTCTTTCACACAGAGAGGTATGGTCATTGGAGGCTGTATGACGAGAGGTTCCAAACGGATGTTTTCCGAATT

Coding sequence (CDS)

ATGACAGATCCGTCGGAATCGGCGTCGCCGGCGTGGGCCGAGCTGACGCACGAGTGCCTGACCAACATCGTGTCGCGGCTGAGCGTGGAGCAGCGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGTTCCGCGCCGCCACCGACTCCTCTCTCTTCTCCGAGTTCGACCTCGAACCCCGATTCGACTCGGCGCCCACCGAGTCACCGGCCTGGTGGTCGCCCGAGTTCCAGACCAAAATCGATTCCATGCTCCGATCGGTCCTCGATTGGAGCCATGGATCTCTCTCCCTTATTCGGATCAGACACTGCTCCGATCTCTCCCTTCATCTCGTCCCTCAAAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACAGATAAATCAATGGCTAAGATCGCTCTTGGTTGCCAAAAGCTCCGGGAAGTCGACATCAGCTACTGTTATGAAATCTCCCACGAATCTTTGGCGTTAATCGGCAGGCATTGTCCAAATATAAAGACTCTAAAACGGAACTTTTTCAACACTCTAGATCCTTCCCAACACACGGGAATTGTCCCCGAAGATTATCTAAATGCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAGTTCATGCCCAACTTGGAGCACCTTGAACTCTGTTTCTCTAAACTAACAGCTAAAGCCCTTAGTTTGATCTGTGAAGGATGTCCAAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGCGATATAGCGAATGCTACTACAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATACCGAGGTCGGTCTTTCACACAGAGAGGTATGGTCATTGGAGGCTGTATGACGAGAGGTTCCAAACGGATGTTTTCCGAATT

Protein sequence

MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI
Homology
BLAST of MS007205 vs. NCBI nr
Match: XP_022158176.1 (F-box protein SKIP1-like [Momordica charantia])

HSP 1 Score: 630.6 bits (1625), Expect = 7.2e-177
Identity = 302/304 (99.34%), Postives = 303/304 (99.67%), Query Frame = 0

Query: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEP 60
           MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAAT SSLFSEFDLEP
Sbjct: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEP 60

Query: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120
           RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE
Sbjct: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120

Query: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180
           VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN
Sbjct: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180

Query: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240
           TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP
Sbjct: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240

Query: 241 NLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300
           NLKYLDLFGCVNLTSR+IANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD
Sbjct: 241 NLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300

Query: 301 VFRI 305
           VFRI
Sbjct: 301 VFRI 304

BLAST of MS007205 vs. NCBI nr
Match: KAG6599142.1 (F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030085.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 548.1 bits (1411), Expect = 4.7e-152
Identity = 257/297 (86.53%), Postives = 276/297 (92.93%), Query Frame = 0

Query: 8   ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPT 67
           A P+WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAATDSSLFS FDLEPRFDS PT
Sbjct: 2   AEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPT 61

Query: 68  ESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSC 127
           ESPAWWSP+F+ KIDSMLRS + WS GSLSLIRIRHCSD SL LV Q CPNLEVLSIKSC
Sbjct: 62  ESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSC 121

Query: 128 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 187
            NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ 
Sbjct: 122 ANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQ 181

Query: 188 TGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 247
            GIVP+ YLNACPQDVDSEA AIAKFMPNLEHL+LCFSKL+AKAL+LIC+GCPNLKYLDL
Sbjct: 182 KGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDL 241

Query: 248 FGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           FGCVNLTSRDI NAT+SLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 242 FGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

BLAST of MS007205 vs. NCBI nr
Match: XP_022946543.1 (F-box protein SKIP1-like [Cucurbita moschata])

HSP 1 Score: 547.0 bits (1408), Expect = 1.0e-151
Identity = 256/297 (86.20%), Postives = 276/297 (92.93%), Query Frame = 0

Query: 8   ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPT 67
           A P+WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAATDSSLFS FDLEPRFDS PT
Sbjct: 2   AEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPT 61

Query: 68  ESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSC 127
           ESPAWWSP+F+ KIDSMLRS + WS GSLSLIRIRHCSD SL LV Q CPNLEVLSIKSC
Sbjct: 62  ESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSC 121

Query: 128 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 187
            NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ 
Sbjct: 122 ANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQ 181

Query: 188 TGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 247
            GIVP+ YLNACPQDVDSEA AIAKFMPNLEHL+LCFSKL+AKAL+LIC+GCPNLKYLDL
Sbjct: 182 KGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDL 241

Query: 248 FGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           FGCVNLTSRDI NAT++LENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 242 FGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

BLAST of MS007205 vs. NCBI nr
Match: XP_038890479.1 (F-box protein SKIP1 [Benincasa hispida])

HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151
Identity = 258/298 (86.58%), Postives = 278/298 (93.29%), Query Frame = 0

Query: 7   SASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAP 66
           S S +WAELTHECLTNI+SRL++EQRWRGPMLVCKLW RAATD SLFS FDLEPRF+S P
Sbjct: 6   SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESTP 65

Query: 67  TESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKS 126
           TESPAWWSPEF+TKIDSMLRS + WS GSLSLIRIRHCSD SL  V Q CPNLEVLSIKS
Sbjct: 66  TESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSLDFVAQGCPNLEVLSIKS 125

Query: 127 CPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQ 186
           C NVTD+SMAKIALGCQKLREVDISYC+EIS+ SLALIG+HCPNIKT+KRNFFN LDPSQ
Sbjct: 126 CANVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTIKRNFFNNLDPSQ 185

Query: 187 HTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLD 246
           H GIVP++YLN+CPQDVDSEAAAIAKFMPNLEHLEL FSKL+AKALSLICEGCP LK+LD
Sbjct: 186 HKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKFLD 245

Query: 247 LFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           LFGCVNLTSRDIANAT+S+ENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 246 LFGCVNLTSRDIANATSSMENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 303

BLAST of MS007205 vs. NCBI nr
Match: XP_022999743.1 (F-box protein SKIP1-like [Cucurbita maxima])

HSP 1 Score: 545.8 bits (1405), Expect = 2.3e-151
Identity = 256/297 (86.20%), Postives = 276/297 (92.93%), Query Frame = 0

Query: 8   ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPT 67
           A  +WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAATDSSLFS FDL+PRFDS PT
Sbjct: 2   AEASWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLQPRFDSTPT 61

Query: 68  ESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSC 127
           ESPAWWSP+F+TKIDSMLRS + WS GSLSLIRIRHCSD SL LV Q CPNLEVLSIKSC
Sbjct: 62  ESPAWWSPQFETKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSC 121

Query: 128 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 187
            NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ 
Sbjct: 122 ANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQ 181

Query: 188 TGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 247
            GIVP+ YLNACPQDVDSEA AIAKFMPNLEHLELCFSK++AKAL+LIC+GCPNLKYLDL
Sbjct: 182 KGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLELCFSKVSAKALTLICKGCPNLKYLDL 241

Query: 248 FGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           FGCVNLTSRDI NAT+SLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 242 FGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

BLAST of MS007205 vs. ExPASy Swiss-Prot
Match: Q9FDX1 (F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.0e-96
Identity = 173/296 (58.45%), Postives = 217/296 (73.31%), Query Frame = 0

Query: 12  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPA 71
           W  L  E L NI+SRL++++ W GPM V K W     D  L+S FDLEP FDS P ES  
Sbjct: 8   WGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP-ESTH 67

Query: 72  WWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSCPNVT 131
            WSPEF+ K+D MLRSV+DWS G L+ IR+RHCSD +L     RCPNL+VL+I+S PNVT
Sbjct: 68  LWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSSPNVT 127

Query: 132 DKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIV 191
           D SM KIA  C+ L+E+DISYC+EISH++L +IGR+CPN++ LKRN  +    S+H G V
Sbjct: 128 DASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDW--SSRHIGSV 187

Query: 192 PEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCV 251
           P +YL+ACPQD D+EA AI K M NLEHLE+ FS+L+ K L+ ICEGCP L+YLDLFGCV
Sbjct: 188 PTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCV 247

Query: 252 NLTSRDIANATTSLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDVFRI 305
           +L+SRDI +  + L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Sbjct: 248 HLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

BLAST of MS007205 vs. ExPASy Swiss-Prot
Match: Q9M096 (Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 7.7e-81
Identity = 156/283 (55.12%), Postives = 193/283 (68.20%), Query Frame = 0

Query: 10  PAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTES 69
           P W+ELT ECL +I SRLS EQRW GPMLV K W  A  D +L + FDLE RF S P ES
Sbjct: 18  PDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ES 77

Query: 70  PAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSCPN 129
             WW+PEF+ K+DS LRSV+D S G L+ IRIRHC++ SL    +RCPNLEVL IK+CPN
Sbjct: 78  INWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPN 137

Query: 130 VTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTG 189
           VTD SM KIA+ C  LRE+DISY Y I+HESL  +GR C N+K LKRN    L PS  T 
Sbjct: 138 VTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTI 197

Query: 190 IVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFG 249
           + P DYL   P+  + EA  I K+M  L+HLE+ +S LTA+ L  +C+GC NL+Y+DL G
Sbjct: 198 VAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRG 257

Query: 250 CVNLTSRDIANATTSLENL-EIRKPNFYIPRSVFHTERYGHWR 292
           C++LT  DI   T+ L+NL EI KP+F  P +V    R G+ R
Sbjct: 258 CISLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPRPGNPR 299

BLAST of MS007205 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.9e-29
Identity = 86/244 (35.25%), Postives = 125/244 (51.23%), Query Frame = 0

Query: 12  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPA 71
           WAEL  +  ++I+ RL   +  +    VCK W R   D S++ + D++ R D A      
Sbjct: 181 WAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRA------ 240

Query: 72  WWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRH--CSDLSLHLVPQRCPNLEVLSIKSCPN 131
                F+  ++SM R  +D SHG L  I I +   +DL ++ +  R  NL+ L +  C  
Sbjct: 241 ----AFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMY-IADRSSNLKSLGLVRCFP 300

Query: 132 VTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTG 191
           +TD+ +AK       L  +++SYC   S ESL  IGR CPN+KTLK N            
Sbjct: 301 ITDEGVAKAVSKVPLLEYLEVSYCL-FSGESLRDIGRSCPNLKTLKLN------------ 360

Query: 192 IVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFG 251
             PE  +       D  A AIA+ MP L HL+L  + LT K L+ I +GCP+L++LDL  
Sbjct: 361 RAPE--IMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQ 398

Query: 252 CVNL 254
           C N+
Sbjct: 421 CFNI 398

BLAST of MS007205 vs. ExPASy Swiss-Prot
Match: Q9S9V8 (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-23
Identity = 76/246 (30.89%), Postives = 115/246 (46.75%), Query Frame = 0

Query: 12  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPA 71
           WAEL  E  ++I+ RL   +  +    VCK W R   D S++ + D+  + +        
Sbjct: 21  WAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVN----- 80

Query: 72  WWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LHLVPQRCPNLEVLSIKSCPNV 131
             S E    I+ +    +D S G L  I I +  + S L+ +  R  NL  L +  C  V
Sbjct: 81  --SVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPV 140

Query: 132 TDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGI 191
             + + + A+    L E+DI+Y   I  + L ++G+ CPN++TLK N             
Sbjct: 141 LSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLN------------- 200

Query: 192 VPEDYLNACPQDV---DSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 251
                   C  DV   D  A AIA+ MP L HL+L  + L+   L+ I EGCP+LK L L
Sbjct: 201 --------CTGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGL 238

Query: 252 FGCVNL 254
             C+N+
Sbjct: 261 HQCLNI 238

BLAST of MS007205 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.2e-21
Identity = 76/247 (30.77%), Postives = 114/247 (46.15%), Query Frame = 0

Query: 9   SPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTE 68
           S  W EL  E  + I+ RL   +       VC+ W R   D S++ + D+    D     
Sbjct: 16  STNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGD----- 75

Query: 69  SPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LHLVPQRCPNLEVLSIKSC 128
                  +    ++ M R  +D S G L  I I +   +  L+ +  R  NL  L +  C
Sbjct: 76  -----LDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRC 135

Query: 129 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 188
             +TD    + A+    L E+++SYC   S ESL ++G+ C N+KTLK            
Sbjct: 136 SQITDDGFVE-AVVKLPLEELELSYC-SFSVESLRVVGQCCLNMKTLK------------ 195

Query: 189 TGIVPEDYLNACPQ-DVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLD 248
                   LN  PQ + D +A AIA+ MP L HL+LC + L+   L+ I + C NL++LD
Sbjct: 196 --------LNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLD 230

Query: 249 LFGCVNL 254
           L  C N+
Sbjct: 256 LRRCFNV 230

BLAST of MS007205 vs. ExPASy TrEMBL
Match: A0A6J1E082 (F-box protein SKIP1-like OS=Momordica charantia OX=3673 GN=LOC111024715 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 3.5e-177
Identity = 302/304 (99.34%), Postives = 303/304 (99.67%), Query Frame = 0

Query: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEP 60
           MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAAT SSLFSEFDLEP
Sbjct: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATYSSLFSEFDLEP 60

Query: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120
           RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE
Sbjct: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120

Query: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180
           VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN
Sbjct: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180

Query: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240
           TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP
Sbjct: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240

Query: 241 NLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300
           NLKYLDLFGCVNLTSR+IANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD
Sbjct: 241 NLKYLDLFGCVNLTSRNIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300

Query: 301 VFRI 305
           VFRI
Sbjct: 301 VFRI 304

BLAST of MS007205 vs. ExPASy TrEMBL
Match: A0A6J1G461 (F-box protein SKIP1-like OS=Cucurbita moschata OX=3662 GN=LOC111450576 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 5.1e-152
Identity = 256/297 (86.20%), Postives = 276/297 (92.93%), Query Frame = 0

Query: 8   ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPT 67
           A P+WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAATDSSLFS FDLEPRFDS PT
Sbjct: 2   AEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTPT 61

Query: 68  ESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSC 127
           ESPAWWSP+F+ KIDSMLRS + WS GSLSLIRIRHCSD SL LV Q CPNLEVLSIKSC
Sbjct: 62  ESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSC 121

Query: 128 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 187
            NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ 
Sbjct: 122 ANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQ 181

Query: 188 TGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 247
            GIVP+ YLNACPQDVDSEA AIAKFMPNLEHL+LCFSKL+AKAL+LIC+GCPNLKYLDL
Sbjct: 182 KGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLDL 241

Query: 248 FGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           FGCVNLTSRDI NAT++LENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 242 FGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

BLAST of MS007205 vs. ExPASy TrEMBL
Match: A0A6J1KKL1 (F-box protein SKIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111494002 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.1e-151
Identity = 256/297 (86.20%), Postives = 276/297 (92.93%), Query Frame = 0

Query: 8   ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPT 67
           A  +WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAATDSSLFS FDL+PRFDS PT
Sbjct: 2   AEASWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLQPRFDSTPT 61

Query: 68  ESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSC 127
           ESPAWWSP+F+TKIDSMLRS + WS GSLSLIRIRHCSD SL LV Q CPNLEVLSIKSC
Sbjct: 62  ESPAWWSPQFETKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIKSC 121

Query: 128 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 187
            NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ 
Sbjct: 122 ANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPSQQ 181

Query: 188 TGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 247
            GIVP+ YLNACPQDVDSEA AIAKFMPNLEHLELCFSK++AKAL+LIC+GCPNLKYLDL
Sbjct: 182 KGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLELCFSKVSAKALTLICKGCPNLKYLDL 241

Query: 248 FGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 305
           FGCVNLTSRDI NAT+SLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 242 FGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

BLAST of MS007205 vs. ExPASy TrEMBL
Match: A0A5D3BD72 (F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00320 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 9.0e-149
Identity = 257/304 (84.54%), Postives = 277/304 (91.12%), Query Frame = 0

Query: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEP 60
           M +PS S S +WAELTHECLTNI+SRL++EQRWRGPMLVCK WFRAA D SLFS FDLEP
Sbjct: 1   MAEPS-SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEP 60

Query: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120
           RF+SAPTESPAWW PEF+TKIDSMLRS + WS GSLS+IR+RHCSD SL  V Q CPNLE
Sbjct: 61  RFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLE 120

Query: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180
           VLSIKSC NVTD SMAKIA GCQKLREVDISYC+EIS+ SLALIGRHCPNIKTLKRN+FN
Sbjct: 121 VLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFN 180

Query: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240
            LDPSQH GIVP++YL+ACPQDVDSEAAAIAKFM NLEHLEL FSKL+AKAL+ ICEGCP
Sbjct: 181 NLDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCP 240

Query: 241 NLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300
           NLKYLDLFGCVNLTSRDIANAT+SLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTD
Sbjct: 241 NLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTD 300

Query: 301 VFRI 305
           +FRI
Sbjct: 301 IFRI 303

BLAST of MS007205 vs. ExPASy TrEMBL
Match: A0A1S3BUE6 (F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 9.0e-149
Identity = 257/304 (84.54%), Postives = 277/304 (91.12%), Query Frame = 0

Query: 1   MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEP 60
           M +PS S S +WAELTHECLTNI+SRL++EQRWRGPMLVCK WFRAA D SLFS FDLEP
Sbjct: 1   MAEPS-SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEP 60

Query: 61  RFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLE 120
           RF+SAPTESPAWW PEF+TKIDSMLRS + WS GSLS+IR+RHCSD SL  V Q CPNLE
Sbjct: 61  RFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLE 120

Query: 121 VLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN 180
           VLSIKSC NVTD SMAKIA GCQKLREVDISYC+EIS+ SLALIGRHCPNIKTLKRN+FN
Sbjct: 121 VLSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFN 180

Query: 181 TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCP 240
            LDPSQH GIVP++YL+ACPQDVDSEAAAIAKFM NLEHLEL FSKL+AKAL+ ICEGCP
Sbjct: 181 NLDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCP 240

Query: 241 NLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 300
           NLKYLDLFGCVNLTSRDIANAT+SLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTD
Sbjct: 241 NLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTD 300

Query: 301 VFRI 305
           +FRI
Sbjct: 301 IFRI 303

BLAST of MS007205 vs. TAIR 10
Match: AT5G57900.1 (SKP1 interacting partner 1 )

HSP 1 Score: 354.8 bits (909), Expect = 7.1e-98
Identity = 173/296 (58.45%), Postives = 217/296 (73.31%), Query Frame = 0

Query: 12  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPA 71
           W  L  E L NI+SRL++++ W GPM V K W     D  L+S FDLEP FDS P ES  
Sbjct: 8   WGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP-ESTH 67

Query: 72  WWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSCPNVT 131
            WSPEF+ K+D MLRSV+DWS G L+ IR+RHCSD +L     RCPNL+VL+I+S PNVT
Sbjct: 68  LWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSSPNVT 127

Query: 132 DKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIV 191
           D SM KIA  C+ L+E+DISYC+EISH++L +IGR+CPN++ LKRN  +    S+H G V
Sbjct: 128 DASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDW--SSRHIGSV 187

Query: 192 PEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCV 251
           P +YL+ACPQD D+EA AI K M NLEHLE+ FS+L+ K L+ ICEGCP L+YLDLFGCV
Sbjct: 188 PTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCV 247

Query: 252 NLTSRDIANATTSLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDVFRI 305
           +L+SRDI +  + L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Sbjct: 248 HLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

BLAST of MS007205 vs. TAIR 10
Match: AT4G30640.1 (RNI-like superfamily protein )

HSP 1 Score: 302.0 bits (772), Expect = 5.5e-82
Identity = 156/283 (55.12%), Postives = 193/283 (68.20%), Query Frame = 0

Query: 10  PAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTES 69
           P W+ELT ECL +I SRLS EQRW GPMLV K W  A  D +L + FDLE RF S P ES
Sbjct: 18  PDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ES 77

Query: 70  PAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHLVPQRCPNLEVLSIKSCPN 129
             WW+PEF+ K+DS LRSV+D S G L+ IRIRHC++ SL    +RCPNLEVL IK+CPN
Sbjct: 78  INWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPN 137

Query: 130 VTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTG 189
           VTD SM KIA+ C  LRE+DISY Y I+HESL  +GR C N+K LKRN    L PS  T 
Sbjct: 138 VTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTI 197

Query: 190 IVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFG 249
           + P DYL   P+  + EA  I K+M  L+HLE+ +S LTA+ L  +C+GC NL+Y+DL G
Sbjct: 198 VAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRG 257

Query: 250 CVNLTSRDIANATTSLENL-EIRKPNFYIPRSVFHTERYGHWR 292
           C++LT  DI   T+ L+NL EI KP+F  P +V    R G+ R
Sbjct: 258 CISLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPRPGNPR 299

BLAST of MS007205 vs. TAIR 10
Match: AT4G05497.1 (RNI-like superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-24
Identity = 76/246 (30.89%), Postives = 115/246 (46.75%), Query Frame = 0

Query: 12  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPA 71
           WAEL  E  ++I+ RL   +  +    VCK W R   D S++ + D+  + +        
Sbjct: 21  WAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVN----- 80

Query: 72  WWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LHLVPQRCPNLEVLSIKSCPNV 131
             S E    I+ +    +D S G L  I I +  + S L+ +  R  NL  L +  C  V
Sbjct: 81  --SVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPV 140

Query: 132 TDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGI 191
             + + + A+    L E+DI+Y   I  + L ++G+ CPN++TLK N             
Sbjct: 141 LSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLN------------- 200

Query: 192 VPEDYLNACPQDV---DSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDL 251
                   C  DV   D  A AIA+ MP L HL+L  + L+   L+ I EGCP+LK L L
Sbjct: 201 --------CTGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGL 238

Query: 252 FGCVNL 254
             C+N+
Sbjct: 261 HQCLNI 238

BLAST of MS007205 vs. TAIR 10
Match: AT4G05460.1 (RNI-like superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 3.7e-22
Identity = 76/247 (30.77%), Postives = 114/247 (46.15%), Query Frame = 0

Query: 9   SPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTE 68
           S  W EL  E  + I+ RL   +       VC+ W R   D S++ + D+    D     
Sbjct: 16  STNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGD----- 75

Query: 69  SPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LHLVPQRCPNLEVLSIKSC 128
                  +    ++ M R  +D S G L  I I +   +  L+ +  R  NL  L +  C
Sbjct: 76  -----LDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRC 135

Query: 129 PNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQH 188
             +TD    + A+    L E+++SYC   S ESL ++G+ C N+KTLK            
Sbjct: 136 SQITDDGFVE-AVVKLPLEELELSYC-SFSVESLRVVGQCCLNMKTLK------------ 195

Query: 189 TGIVPEDYLNACPQ-DVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLD 248
                   LN  PQ + D +A AIA+ MP L HL+LC + L+   L+ I + C NL++LD
Sbjct: 196 --------LNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLD 230

Query: 249 LFGCVNL 254
           L  C N+
Sbjct: 256 LRRCFNV 230

BLAST of MS007205 vs. TAIR 10
Match: AT5G52480.1 (RNI-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 3.9e-19
Identity = 62/173 (35.84%), Postives = 91/173 (52.60%), Query Frame = 0

Query: 82  DSMLRSVLDWSHGSLSLIRIRHC-SDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIAL 141
           +++ R+ +D S G L  I I    SD  L  + +R  NL  L +  C  +TD    +  +
Sbjct: 16  EAICRNAVDRSEGGLLEINIGDFGSDSLLTYIAERSSNLRSLRL-MCSEITDDGFVQAVV 75

Query: 142 GCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP 201
               L E+++S    +S ES+ L G  CPN+KTL  N                 YL++  
Sbjct: 76  KLPMLEELEVS-GISLSGESMKLAGLSCPNLKTLMLNRL--------------FYLSS-- 135

Query: 202 QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL 254
            D D +A AIA+ MP L HL+LC +KLT   L+ I +GCP+L++LDL  C+NL
Sbjct: 136 DDDDHDAIAIAESMPKLRHLQLCGNKLTKTGLNAILDGCPHLEHLDLRQCINL 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158176.17.2e-17799.34F-box protein SKIP1-like [Momordica charantia][more]
KAG6599142.14.7e-15286.53F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030085... [more]
XP_022946543.11.0e-15186.20F-box protein SKIP1-like [Cucurbita moschata][more]
XP_038890479.11.4e-15186.58F-box protein SKIP1 [Benincasa hispida][more]
XP_022999743.12.3e-15186.20F-box protein SKIP1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9FDX11.0e-9658.45F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1[more]
Q9M0967.7e-8155.12Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE... [more]
Q9S9V98.9e-2935.25Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE... [more]
Q9S9V82.5e-2330.89Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4... [more]
Q9M0U95.2e-2130.77F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1E0823.5e-17799.34F-box protein SKIP1-like OS=Momordica charantia OX=3673 GN=LOC111024715 PE=4 SV=... [more]
A0A6J1G4615.1e-15286.20F-box protein SKIP1-like OS=Cucurbita moschata OX=3662 GN=LOC111450576 PE=4 SV=1[more]
A0A6J1KKL11.1e-15186.20F-box protein SKIP1-like OS=Cucurbita maxima OX=3661 GN=LOC111494002 PE=4 SV=1[more]
A0A5D3BD729.0e-14984.54F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G... [more]
A0A1S3BUE69.0e-14984.54F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G57900.17.1e-9858.45SKP1 interacting partner 1 [more]
AT4G30640.15.5e-8255.12RNI-like superfamily protein [more]
AT4G05497.11.8e-2430.89RNI-like superfamily protein [more]
AT4G05460.13.7e-2230.77RNI-like superfamily protein [more]
AT5G52480.13.9e-1935.84RNI-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 142..167
e-value: 0.071
score: 22.2
coord: 214..238
e-value: 190.0
score: 4.6
coord: 239..264
e-value: 0.12
score: 21.4
coord: 116..141
e-value: 1.0E-4
score: 31.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 92..275
e-value: 1.3E-32
score: 114.8
NoneNo IPR availableGENE3D1.20.1280.50coord: 11..52
e-value: 2.1E-7
score: 32.6
NoneNo IPR availablePANTHERPTHR16134:SF29F-BOX PROTEIN SKIP1coord: 11..304
NoneNo IPR availablePANTHERPTHR16134F-BOX/TPR REPEAT PROTEIN POF3coord: 11..304
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 99..267
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 9..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS007205.1MS007205.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding