MS007192 (gene) Bitter gourd (TR) v1

Overview


Name	MS007192
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	nuclear pore complex protein NUP43
Location	scaffold25: 1314672 .. 1316947 (+)
RNA-Seq Expression	MS007192
Synteny	MS007192

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATCATAAGCCCCCAGCAGCAGCAACCTCAAATCCACAGATTCCCGCTATTCAAGTACGTCGATGGCGTTCGGTGGCTTCCATCGCTCTCCGCATTTGGTCGCTTTGCTGTCATTGCCACTTTTGACTCCGATTCCGACTCATCCTCCATTGAAATTCACTCCGTGACTCAAAATCTGCTGGATATAGCTCCTCATTCGACTTGGATATCACCTTCAAGAGTCTCTTCCCTTAAAACCTCTCAGACCTACCAAAACCCTCTCGTTTTTGCTTCGACTTATACAGGTTCTCTTCATGTTTTGTCTGTCGAGCCGATGGATGCGTCGCTCGATTCGGAGCTCACGGTACCCGAGAAGACGTTGCACGACGGACCAATTTCTTGCGTCGATGTGATGGATGGCGGCGGTGAATGTCTGACTGTTGCGGAAGATGGGCGGGTGAATTTAGTGAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTCGATAGTAATGGGTTGGTGTCGTATACTTCAGCGAAATGGGCATCGCCTACTGAGTTTGCGACTGGAGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGGGGAGCAGTTTCTCAGTTTAAGGGCGACTGGTATGTGAATTTGTTTACCTCGCTTGGCATCCTGTCATATACATGTGAAGATTTAGCATCTAGGACTTGGTAATTAAATGTTGTGGGCTTTATGAGTTTGCCTTGCTACACATCGGTACGGGTTTAGAAAAGTTTTCATGTGATAGTTGCTTGTTTGTGTAGACGAAAGATTAACTAGTTCTTAAAAAATCTCTGGTTCGTCTACAAAAACTAGTAAATGAAATTTGGTCTCTAATCTTGAAAAGAGTAAGGTGCCGAAGTTGATTAACAGGGGTGCTGAATTTCTTCTTCTGTGTCAATATTACAGGGCTTCTGGTATTGTTCACTGCATTGACATCCATCCTTCGCGAAAGCATACCTGTTTGGTAAATCAGTTGCCTTACCTTCTTATCTTTTCATGGTACTCAAGCAATCTTAGTCACGTGCGTTTCTATTAACTCTGTAGAAGATCCATGACTGCAAGCTCACGGTTTCCTTTAAAACTTTGTGAGAGATATTTTCTTTACTTTCTACCATTCAGTTTGGGTTATAGGTGCGACATGAGCCATATGCAATTGCCAAACTCCTATGAAGTCTTTTTCGATCCAACTCTTTTAGTAGATTACTTGGGCAAGTTATTGAATTAATTAATTTAAAGAAACATATAGTTTTTATTTTTTAACTTTTCGGGAGTTTAGGTCATTAGTGAAATTTGTTTTCCAACCTTAATATCATCATATTATAGAATTTTTTAATGGTCTTCTTTTCTTTGTTTAAGGTTGTCACCACTTCATGTTGTTTTATCTTTCTTCTTCTGCCCTTATTTATGAGTTATGATATTAGTGTGCTTATTATTCCCCATGTTAGGCAGGAGGCTCTTTTGGAACTGTTTTTGCCTGGGATTTGAGGTGGCAACAGCAGCCTATTATTCTTTCGGGTCTAGAAAGGAGCAAAGCTTCAAATCTTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCATATATAAAGTCTTGCAATATAGGTGGCATGTCATCTTCGCAGATTTTACCTGCCATGATTTGCTCTGAGGATGGGATTTTGACTAGTGTCGAGCAAGGTATGAGTTGATGCTGCAAGCCTTGTGGGGTGGAGTGGCTGAGGGCCAATCATCGTGTATTGAAAGTATTTTTGTTGCTTCATATGCTAATACATAAGTAGTTTTACTTTTGTTTCTGTTATCTAATGACTATTGGTTATCTTCTTATTGCAAGAAAAAAAAGTGAAAAAAACTATTGTCTATTCCATATACATAAACTAGCTCAACTTTTCTATTTATGTGGCTTGTAGGCAAGCAGCCTGTGGAATTGCTGGCGGAACCTTGTGCAATTAATGGTTTTGACATTGATCGTCAACACCCATCAGTAAGTTGCCTGTGTACTTTTTTATGCGAACTTGTGTTGTCTACTTATTTTGTTGTGATGGTAAAATATCCAGTTTTGACTGAAATTGTTGTTCCTATCTGTGAAAATTGTCTTTTCTAAAAACTTTGATTCTTGAAAATGAGTGCTGTGAGGGATTTGTAAGTGGGGGGACTATGTTTTAAGGCTCTCTAAATTTGCTATGCAGGAAGTGATATGTAACTTGGAGTGGGAATCCGTGGCCATTCTGTCAAGACCC

mRNA sequence

ATGGCGATCATAAGCCCCCAGCAGCAGCAACCTCAAATCCACAGATTCCCGCTATTCAAGTACGTCGATGGCGTTCGGTGGCTTCCATCGCTCTCCGCATTTGGTCGCTTTGCTGTCATTGCCACTTTTGACTCCGATTCCGACTCATCCTCCATTGAAATTCACTCCGTGACTCAAAATCTGCTGGATATAGCTCCTCATTCGACTTGGATATCACCTTCAAGAGTCTCTTCCCTTAAAACCTCTCAGACCTACCAAAACCCTCTCGTTTTTGCTTCGACTTATACAGGTTCTCTTCATGTTTTGTCTGTCGAGCCGATGGATGCGTCGCTCGATTCGGAGCTCACGGTACCCGAGAAGACGTTGCACGACGGACCAATTTCTTGCGTCGATGTGATGGATGGCGGCGGTGAATGTCTGACTGTTGCGGAAGATGGGCGGGTGAATTTAGTGAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTCGATAGTAATGGGTTGGTGTCGTATACTTCAGCGAAATGGGCATCGCCTACTGAGTTTGCGACTGGAGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGGGGAGCAGTTTCTCAGTTTAAGGGCGACTGGGCTTCTGGTATTGTTCACTGCATTGACATCCATCCTTCGCGAAAGCATACCTGTTTGGCAGGAGGCTCTTTTGGAACTGTTTTTGCCTGGGATTTGAGGTGGCAACAGCAGCCTATTATTCTTTCGGGTCTAGAAAGGAGCAAAGCTTCAAATCTTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCATATATAAAGTCTTGCAATATAGGTGGCATGTCATCTTCGCAGATTTTACCTGCCATGATTTGCTCTGAGGATGGGATTTTGACTAGTGTCGAGCAAGGCAAGCAGCCTGTGGAATTGCTGGCGGAACCTTGTGCAATTAATGGTTTTGACATTGATCGTCAACACCCATCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTGGCCATTCTGTCAAGACCC

Coding sequence (CDS)

ATGGCGATCATAAGCCCCCAGCAGCAGCAACCTCAAATCCACAGATTCCCGCTATTCAAGTACGTCGATGGCGTTCGGTGGCTTCCATCGCTCTCCGCATTTGGTCGCTTTGCTGTCATTGCCACTTTTGACTCCGATTCCGACTCATCCTCCATTGAAATTCACTCCGTGACTCAAAATCTGCTGGATATAGCTCCTCATTCGACTTGGATATCACCTTCAAGAGTCTCTTCCCTTAAAACCTCTCAGACCTACCAAAACCCTCTCGTTTTTGCTTCGACTTATACAGGTTCTCTTCATGTTTTGTCTGTCGAGCCGATGGATGCGTCGCTCGATTCGGAGCTCACGGTACCCGAGAAGACGTTGCACGACGGACCAATTTCTTGCGTCGATGTGATGGATGGCGGCGGTGAATGTCTGACTGTTGCGGAAGATGGGCGGGTGAATTTAGTGAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTCGATAGTAATGGGTTGGTGTCGTATACTTCAGCGAAATGGGCATCGCCTACTGAGTTTGCGACTGGAGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGGGGAGCAGTTTCTCAGTTTAAGGGCGACTGGGCTTCTGGTATTGTTCACTGCATTGACATCCATCCTTCGCGAAAGCATACCTGTTTGGCAGGAGGCTCTTTTGGAACTGTTTTTGCCTGGGATTTGAGGTGGCAACAGCAGCCTATTATTCTTTCGGGTCTAGAAAGGAGCAAAGCTTCAAATCTTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCATATATAAAGTCTTGCAATATAGGTGGCATGTCATCTTCGCAGATTTTACCTGCCATGATTTGCTCTGAGGATGGGATTTTGACTAGTGTCGAGCAAGGCAAGCAGCCTGTGGAATTGCTGGCGGAACCTTGTGCAATTAATGGTTTTGACATTGATCGTCAACACCCATCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTGGCCATTCTGTCAAGACCC

Protein sequence

MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSEDGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Homology

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BLAST of MS007192 vs. NCBI nr
Match: XP_022158135.1 (nuclear pore complex protein NUP43 [Momordica charantia])

HSP 1 Score: 728.8 bits (1880), Expect = 2.2e-206
Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60
           MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN
Sbjct: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60

Query: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120
           LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK
Sbjct: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120

Query: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASP 180
           TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASP
Sbjct: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240
           TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA
Sbjct: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240

Query: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300
           WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
Sbjct: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300

Query: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 352
           DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Sbjct: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 351

[Close]

BLAST of MS007192 vs. NCBI nr
Match: XP_022937892.1 (nuclear pore complex protein NUP43 [Cucurbita moschata])

HSP 1 Score: 681.0 bits (1756), Expect = 5.4e-192
Identity = 327/351 (93.16%), Postives = 336/351 (95.73%), Query Frame = 0


Query: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60
           MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN
Sbjct: 1   MAIVSP-QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQN 60

Query: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120
            LD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHVLSVEPMDASLDSEL+VPEK
Sbjct: 61  PLDMAPQSFWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEK 120

Query: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASP 180
            LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASP
Sbjct: 121 VLHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240
           TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA
Sbjct: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240

Query: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300
           WDLRWQQQPIILSGLE SK SN SPCESEVWEVHYDPYIKS NIGGMSSSQILPAMICSE
Sbjct: 241 WDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSE 300

Query: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 352
           DGI+TS+EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Sbjct: 301 DGIITSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 350

[Close]

BLAST of MS007192 vs. NCBI nr
Match: KAG6586038.1 (Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 679.9 bits (1753), Expect = 1.2e-191
Identity = 326/351 (92.88%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60
           MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN
Sbjct: 1   MAIVSP-QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQN 60

Query: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120
            LD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHVLSVEPMDASLDSEL+VPEK
Sbjct: 61  PLDMAPQSVWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEK 120

Query: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASP 180
            LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASP
Sbjct: 121 VLHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240
           TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGT FA
Sbjct: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTFFA 240

Query: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300
           WDLRWQQQPIILSGLE SK SN SPCESEVWEVHYDPYIKS NIGGMSSSQILPAMICSE
Sbjct: 241 WDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSE 300

Query: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 352
           DGI+TS+EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Sbjct: 301 DGIITSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 350

[Close]

BLAST of MS007192 vs. NCBI nr
Match: XP_023538014.1 (nuclear pore complex protein NUP43 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 677.9 bits (1748), Expect = 4.5e-191
Identity = 326/351 (92.88%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60
           MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN
Sbjct: 1   MAIVSP-QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQN 60

Query: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120
            LD+AP S W SPSRVSSLKTSQ YQNPLVFASTYTGSLHVLSVEPMDASLDSEL+VPEK
Sbjct: 61  PLDMAPQSAWTSPSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEK 120

Query: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASP 180
            LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASP
Sbjct: 121 VLHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240
           TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFA
Sbjct: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCMDIHPSRKHTCLAGGSFGTVFA 240

Query: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300
           WDLRWQQQPIILSGLE SK SN SPCESEVWEVHYDPYIKS NIGGMSSSQILPAMICSE
Sbjct: 241 WDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSE 300

Query: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 352
           DGI+TS+EQGKQPVELLAEPCAINGFDIDRQ PSEVICNLEWESVAILSRP
Sbjct: 301 DGIITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSRP 350

[Close]

BLAST of MS007192 vs. NCBI nr
Match: XP_022969681.1 (nuclear pore complex protein NUP43 [Cucurbita maxima])

HSP 1 Score: 670.6 bits (1729), Expect = 7.3e-189
Identity = 321/351 (91.45%), Postives = 332/351 (94.59%), Query Frame = 0


Query: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60
           MAI+SP QQQPQIHRFP FKY+DGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN
Sbjct: 1   MAIVSP-QQQPQIHRFPQFKYIDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQN 60

Query: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120
            LD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHVLSVEPMDASLDSEL+VPEK
Sbjct: 61  PLDMAPQSAWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEK 120

Query: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASP 180
            LHD PISCVDVMD GGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASP
Sbjct: 121 ILHDRPISCVDVMDSGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240
           TEFATGGCGFSLQWWDQRKPGGAV QFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFA
Sbjct: 181 TEFATGGCGFSLQWWDQRKPGGAVCQFKGDWASGIVHCMDIHPSRKHTCLAGGSFGTVFA 240

Query: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300
           WDLRWQQQPIILSGLE SK SN SPCESEVWEV YDPYIKS NIGGMSSSQILPAMICSE
Sbjct: 241 WDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVRYDPYIKSGNIGGMSSSQILPAMICSE 300

Query: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 352
           DGI+TS+EQGKQPVELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Sbjct: 301 DGIITSIEQGKQPVELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP 350

[Close]

BLAST of MS007192 vs. ExPASy Swiss-Prot
Match: Q24JJ9 (Nuclear pore complex protein NUP43 OS=Arabidopsis thaliana OX=3702 GN=NUP43 PE=1 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 3.5e-109
Identity = 208/362 (57.46%), Postives = 249/362 (68.78%), Query Frame = 0


Query: 8   QQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLD---- 67
           Q   Q+HR P  KYVDGVRWLP  SA  RF   A++D+D DSSSIEI S+  N       
Sbjct: 5   QDSFQVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLDPNPRGNHNT 64

Query: 68  ---IAPHSTWISPSRVSSLKTSQT-----YQNPLVFASTYTGSLHVLSVEPMDASLDSEL 127
              I   S+W SPSRVSSL+ +          P+V A+T +GSLHVL ++ ++ +   E 
Sbjct: 65  NPLIESLSSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEEF 124

Query: 128 TVPE-KTLHDGPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVSYT 187
              E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y 
Sbjct: 125 YAAEGERFHVGRVEGVDWRE-GGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYR 184

Query: 188 SAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTC 247
           + KWASPTEF TGG GF LQ WDQRK G AVSQ KG+W     S IVH IDIHPSRKHTC
Sbjct: 185 AVKWASPTEFVTGGYGFGLQLWDQRKSGEAVSQLKGNWFQGKTSAIVHSIDIHPSRKHTC 244

Query: 248 LAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSS 307
           +AGGS GTVFAWDLRW QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +SS
Sbjct: 245 IAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKS----NVSS 304

Query: 308 SQILPAMICSEDGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILS 352
           S+ILP M CSEDGIL  +EQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ S
Sbjct: 305 SRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFS 361

[Close]

BLAST of MS007192 vs. ExPASy TrEMBL
Match: A0A6J1DUZ0 (nuclear pore complex protein NUP43 OS=Momordica charantia OX=3673 GN=LOC111024694 PE=4 SV=1)

HSP 1 Score: 728.8 bits (1880), Expect = 1.1e-206
Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60
           MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN
Sbjct: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60

Query: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120
           LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK
Sbjct: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120

Query: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASP 180
           TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASP
Sbjct: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240
           TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA
Sbjct: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240

Query: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300
           WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
Sbjct: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300

Query: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 352
           DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Sbjct: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 351

[Close]

BLAST of MS007192 vs. ExPASy TrEMBL
Match: A0A6J1FCG9 (nuclear pore complex protein NUP43 OS=Cucurbita moschata OX=3662 GN=LOC111444145 PE=4 SV=1)

HSP 1 Score: 681.0 bits (1756), Expect = 2.6e-192
Identity = 327/351 (93.16%), Postives = 336/351 (95.73%), Query Frame = 0


Query: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60
           MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN
Sbjct: 1   MAIVSP-QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQN 60

Query: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120
            LD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHVLSVEPMDASLDSEL+VPEK
Sbjct: 61  PLDMAPQSFWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEK 120

Query: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASP 180
            LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASP
Sbjct: 121 VLHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240
           TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA
Sbjct: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240

Query: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300
           WDLRWQQQPIILSGLE SK SN SPCESEVWEVHYDPYIKS NIGGMSSSQILPAMICSE
Sbjct: 241 WDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSE 300

Query: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 352
           DGI+TS+EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Sbjct: 301 DGIITSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 350

[Close]

BLAST of MS007192 vs. ExPASy TrEMBL
Match: A0A6J1HYH3 (nuclear pore complex protein NUP43 OS=Cucurbita maxima OX=3661 GN=LOC111468634 PE=4 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 3.5e-189
Identity = 321/351 (91.45%), Postives = 332/351 (94.59%), Query Frame = 0


Query: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60
           MAI+SP QQQPQIHRFP FKY+DGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN
Sbjct: 1   MAIVSP-QQQPQIHRFPQFKYIDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQN 60

Query: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120
            LD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLHVLSVEPMDASLDSEL+VPEK
Sbjct: 61  PLDMAPQSAWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEK 120

Query: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASP 180
            LHD PISCVDVMD GGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASP
Sbjct: 121 ILHDRPISCVDVMDSGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240
           TEFATGGCGFSLQWWDQRKPGGAV QFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFA
Sbjct: 181 TEFATGGCGFSLQWWDQRKPGGAVCQFKGDWASGIVHCMDIHPSRKHTCLAGGSFGTVFA 240

Query: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300
           WDLRWQQQPIILSGLE SK SN SPCESEVWEV YDPYIKS NIGGMSSSQILPAMICSE
Sbjct: 241 WDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVRYDPYIKSGNIGGMSSSQILPAMICSE 300

Query: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 352
           DGI+TS+EQGKQPVELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Sbjct: 301 DGIITSIEQGKQPVELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP 350

[Close]

BLAST of MS007192 vs. ExPASy TrEMBL
Match: A0A5D3BAS9 (Nuclear pore complex protein NUP43 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00190 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 3.6e-186
Identity = 318/350 (90.86%), Postives = 331/350 (94.57%), Query Frame = 0


Query: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60
           MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAF RFAVIA FDSD DSSSIEIHS+TQN
Sbjct: 1   MAILSP-QQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQN 60

Query: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120
            LDIAPHSTW+SPSRVSSLKTSQ +QNPLVFASTYTGSLHVLSVEPM+ASLDSEL+VPEK
Sbjct: 61  PLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEK 120

Query: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASP 180
            LHDGPISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY + KWASP
Sbjct: 121 MLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240
           TEF TGGCGFSLQWWDQRKPGGAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFA
Sbjct: 181 TEFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240

Query: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300
           WDLR QQQPIILSGLE +K SN SPCESEVWEVHYDPYIKS N+GGMSS+QILPAMICSE
Sbjct: 241 WDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSE 300

Query: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 351
           DGILTS+EQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Sbjct: 301 DGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 349

[Close]

BLAST of MS007192 vs. ExPASy TrEMBL
Match: A0A1S3BTA6 (nuclear pore complex protein NUP43 OS=Cucumis melo OX=3656 GN=LOC103493491 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 3.6e-186
Identity = 318/350 (90.86%), Postives = 331/350 (94.57%), Query Frame = 0


Query: 1   MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQN 60
           MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAF RFAVIA FDSD DSSSIEIHS+TQN
Sbjct: 1   MAILSP-QQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQN 60

Query: 61  LLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDASLDSELTVPEK 120
            LDIAPHSTW+SPSRVSSLKTSQ +QNPLVFASTYTGSLHVLSVEPM+ASLDSEL+VPEK
Sbjct: 61  PLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEK 120

Query: 121 TLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASP 180
            LHDGPISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY + KWASP
Sbjct: 121 MLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240
           TEF TGGCGFSLQWWDQRKPGGAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFA
Sbjct: 181 TEFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFA 240

Query: 241 WDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE 300
           WDLR QQQPIILSGLE +K SN SPCESEVWEVHYDPYIKS N+GGMSS+QILPAMICSE
Sbjct: 241 WDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSE 300

Query: 301 DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 351
           DGILTS+EQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Sbjct: 301 DGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 349

[Close]

BLAST of MS007192 vs. TAIR 10
Match: AT4G30840.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 396.4 bits (1017), Expect = 2.5e-110
Identity = 208/362 (57.46%), Postives = 249/362 (68.78%), Query Frame = 0


Query: 8   QQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLD---- 67
           Q   Q+HR P  KYVDGVRWLP  SA  RF   A++D+D DSSSIEI S+  N       
Sbjct: 5   QDSFQVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLDPNPRGNHNT 64

Query: 68  ---IAPHSTWISPSRVSSLKTSQT-----YQNPLVFASTYTGSLHVLSVEPMDASLDSEL 127
              I   S+W SPSRVSSL+ +          P+V A+T +GSLHVL ++ ++ +   E 
Sbjct: 65  NPLIESLSSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEEF 124

Query: 128 TVPE-KTLHDGPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVSYT 187
              E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y 
Sbjct: 125 YAAEGERFHVGRVEGVDWRE-GGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYR 184

Query: 188 SAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTC 247
           + KWASPTEF TGG GF LQ WDQRK G AVSQ KG+W     S IVH IDIHPSRKHTC
Sbjct: 185 AVKWASPTEFVTGGYGFGLQLWDQRKSGEAVSQLKGNWFQGKTSAIVHSIDIHPSRKHTC 244

Query: 248 LAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSS 307
           +AGGS GTVFAWDLRW QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +SS
Sbjct: 245 IAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKS----NVSS 304

Query: 308 SQILPAMICSEDGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILS 352
           S+ILP M CSEDGIL  +EQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ S
Sbjct: 305 SRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFS 361

The following BLAST results are available for this feature:

BLAST of MS007192 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158135.1	2.2e-206	99.72	nuclear pore complex protein NUP43 [Momordica charantia]	[more]
XP_022937892.1	5.4e-192	93.16	nuclear pore complex protein NUP43 [Cucurbita moschata]	[more]
KAG6586038.1	1.2e-191	92.88	Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023538014.1	4.5e-191	92.88	nuclear pore complex protein NUP43 [Cucurbita pepo subsp. pepo]	[more]
XP_022969681.1	7.3e-189	91.45	nuclear pore complex protein NUP43 [Cucurbita maxima]	[more]

BLAST of MS007192 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q24JJ9	3.5e-109	57.46	Nuclear pore complex protein NUP43 OS=Arabidopsis thaliana OX=3702 GN=NUP43 PE=1...	[more]

BLAST of MS007192 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUZ0	1.1e-206	99.72	nuclear pore complex protein NUP43 OS=Momordica charantia OX=3673 GN=LOC11102469...	[more]
A0A6J1FCG9	2.6e-192	93.16	nuclear pore complex protein NUP43 OS=Cucurbita moschata OX=3662 GN=LOC111444145...	[more]
A0A6J1HYH3	3.5e-189	91.45	nuclear pore complex protein NUP43 OS=Cucurbita maxima OX=3661 GN=LOC111468634 P...	[more]
A0A5D3BAS9	3.6e-186	90.86	Nuclear pore complex protein NUP43 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BTA6	3.6e-186	90.86	nuclear pore complex protein NUP43 OS=Cucumis melo OX=3656 GN=LOC103493491 PE=4 ...	[more]

BLAST of MS007192 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30840.1	2.5e-110	57.46	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 19..349 e-value: 3.6E-26 score: 94.2
None	No IPR available	PANTHER	PTHR22652	NUCLEOPORIN NUP43	coord: 9..350
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 34..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007192.1	MS007192.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding