MS007176 (gene) Bitter gourd (TR) v1

Overview
NameMS007176
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor IBH1-like 1
Locationscaffold25: 1178725 .. 1179255 (-)
RNA-Seq ExpressionMS007176
SyntenyMS007176
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAATCCCAACAAGTTGAAACAACGATTTCTCGAAAAATGGCGGGTGGATTTGAAGACCTATACCGCTTCAAACACAACCATGGACGTCTCAGAGAGAAAGAAAGCGATAAAGATGTCTGCGGACTTGGCCATGGCTTCTGCGAGGAACGGCACGACCATTTGGAGTCGAGCCATCATTGCCAAATCCATGAAAGACAGAGTTCCAGCTGAGCTCGTTCTCAGTCACCCTGTTCACGGGGTGAAGCTTTCGAAGCTCGAGAGGAAGAAGACAACGATGGTGCAAACGAAGGGTCGTCGTAGGGTGGGTCGAAGAGCGACAAGGAGAAGTAACTTCTTCCCGCCATCGAAGGCTTTCGCGAGATTGGTTGCAAAGAGATTGGTTGAGAAGCGAAGGAAAGTTTTGAGGAGTTTGGTTCCTGGGGGAGAGTTTATGGAGGATGAAGTTTTGTTGATTGAAGAAACCCTAGATTACATATCCTTTCTCCGAGCTCAGGTTGATGGAATGCGATTTCTTGCTAGTTGCAAA

mRNA sequence

ATGCCCAATCCCAACAAGTTGAAACAACGATTTCTCGAAAAATGGCGGGTGGATTTGAAGACCTATACCGCTTCAAACACAACCATGGACGTCTCAGAGAGAAAGAAAGCGATAAAGATGTCTGCGGACTTGGCCATGGCTTCTGCGAGGAACGGCACGACCATTTGGAGTCGAGCCATCATTGCCAAATCCATGAAAGACAGAGTTCCAGCTGAGCTCGTTCTCAGTCACCCTGTTCACGGGGTGAAGCTTTCGAAGCTCGAGAGGAAGAAGACAACGATGGTGCAAACGAAGGGTCGTCGTAGGGTGGGTCGAAGAGCGACAAGGAGAAGTAACTTCTTCCCGCCATCGAAGGCTTTCGCGAGATTGGTTGCAAAGAGATTGGTTGAGAAGCGAAGGAAAGTTTTGAGGAGTTTGGTTCCTGGGGGAGAGTTTATGGAGGATGAAGTTTTGTTGATTGAAGAAACCCTAGATTACATATCCTTTCTCCGAGCTCAGGTTGATGGAATGCGATTTCTTGCTAGTTGCAAA

Coding sequence (CDS)

ATGCCCAATCCCAACAAGTTGAAACAACGATTTCTCGAAAAATGGCGGGTGGATTTGAAGACCTATACCGCTTCAAACACAACCATGGACGTCTCAGAGAGAAAGAAAGCGATAAAGATGTCTGCGGACTTGGCCATGGCTTCTGCGAGGAACGGCACGACCATTTGGAGTCGAGCCATCATTGCCAAATCCATGAAAGACAGAGTTCCAGCTGAGCTCGTTCTCAGTCACCCTGTTCACGGGGTGAAGCTTTCGAAGCTCGAGAGGAAGAAGACAACGATGGTGCAAACGAAGGGTCGTCGTAGGGTGGGTCGAAGAGCGACAAGGAGAAGTAACTTCTTCCCGCCATCGAAGGCTTTCGCGAGATTGGTTGCAAAGAGATTGGTTGAGAAGCGAAGGAAAGTTTTGAGGAGTTTGGTTCCTGGGGGAGAGTTTATGGAGGATGAAGTTTTGTTGATTGAAGAAACCCTAGATTACATATCCTTTCTCCGAGCTCAGGTTGATGGAATGCGATTTCTTGCTAGTTGCAAA

Protein sequence

MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAIIAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQTKGRRRVGRRATRRSNFFPPSKAFARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLASCK
Homology
BLAST of MS007176 vs. NCBI nr
Match: XP_022153351.1 (transcription factor IBH1-like 1 [Momordica charantia])

HSP 1 Score: 335.9 bits (860), Expect = 2.1e-88
Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI
Sbjct: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQTKGRRRVGRRATRRSNFFPPSKAF 120
           IAKSMKDRVPAE+VLSHPVHGVKLSKL RKKTTMVQTKGRRRVGRRATRRSNFFPPSKAF
Sbjct: 61  IAKSMKDRVPAEIVLSHPVHGVKLSKLGRKKTTMVQTKGRRRVGRRATRRSNFFPPSKAF 120

Query: 121 ARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLASCK 178
           ARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLASCK
Sbjct: 121 ARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLASCK 177

BLAST of MS007176 vs. NCBI nr
Match: XP_038890559.1 (transcription factor IBH1-like 1 [Benincasa hispida])

HSP 1 Score: 209.5 bits (532), Expect = 2.3e-50
Identity = 119/178 (66.85%), Postives = 138/178 (77.53%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           MPNPNKLKQ+FL+KW V LK+ T+SNT M++ ERKKAIKMSAD AMA+ RNG+TIWSRAI
Sbjct: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNILERKKAIKMSADYAMAATRNGSTIWSRAI 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQTKGRRRVGRRATRRSNFFPPSKAF 120
           IAKS+K + P E + +      KL +  +K TT    K  RRVGR+  R  +  PP KA 
Sbjct: 61  IAKSIKGQAPLEAISNRQTIYAKLQR--KKMTTTTLWKMGRRVGRKVARSRS--PPWKAL 120

Query: 121 ARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS-CK 178
           AR VAKRLVEKR KVLRSLVPGGEFMEDEVLLIEE LDYI+FL+AQVDGMRFLA+ CK
Sbjct: 121 ARTVAKRLVEKRTKVLRSLVPGGEFMEDEVLLIEEALDYITFLQAQVDGMRFLANYCK 174

BLAST of MS007176 vs. NCBI nr
Match: XP_004149100.1 (transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical protein Csa_021346 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 5.9e-46
Identity = 114/181 (62.98%), Postives = 135/181 (74.59%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTT-MDVSERKKAIKMSADLAMASARNGTTIWSRA 60
           MPNPNKLKQ+FL+KW V L++ T+S+TT M+  +RKKAIK+SAD AMA  R GTTIWS++
Sbjct: 1   MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61  IIAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQ-TKGRRRVGRRATRRSNFFPPSK 120
           IIAKS+K   P + +L+    G     L RKK TM Q  K  R++GRR  RRS   P SK
Sbjct: 61  IIAKSLKGHAPPKAILN---RGTIYINLLRKKRTMTQLQKMGRKIGRRMARRSR-LPSSK 120

Query: 121 AFARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS--C 178
              R +AKRLVEKR KVLRSL+PGGEFMEDEVLLIEE LDYI FL+AQVDGMRFLA+  C
Sbjct: 121 VLPRTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYYC 177

BLAST of MS007176 vs. NCBI nr
Match: KAA0048635.1 (transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription factor IBH1 [Cucumis melo var. makuwa])

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-45
Identity = 110/179 (61.45%), Postives = 133/179 (74.30%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           MPNPNKLKQ+FL+ W V L++ T+S T M+  +RKKAIK+SAD AMA+ RNGTTIWS++I
Sbjct: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQ-TKGRRRVGRRATRRSNFFPPSKA 120
           IAKS+K   P E +L+     + L    RKK TM Q  K  R++GR+  RRS   P SKA
Sbjct: 61  IAKSLKGHAPPEAILNRRTSYINLL---RKKRTMTQLRKMGRKIGRKMARRSR-LPLSKA 120

Query: 121 FARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS-CK 178
               +AKRLVEKR KVLRSL+PGGEFM+DE LLIEE LDYI FL+AQVDGMRFLA+ CK
Sbjct: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

BLAST of MS007176 vs. NCBI nr
Match: XP_008452339.1 (PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-43
Identity = 108/179 (60.34%), Postives = 131/179 (73.18%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           MPN NKLKQ+FL+ W V L++ T+S T M+  +RKKAIK+SAD AMA+ RNGTTIWS++I
Sbjct: 1   MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQ-TKGRRRVGRRATRRSNFFPPSKA 120
           IAK +K   P E +L+     + L    RKK TM Q  K  R++GR+  RRS   P SKA
Sbjct: 61  IAKYLKGHAPPEAILNRRTSYINLL---RKKRTMTQLRKMGRKIGRKMARRSR-LPLSKA 120

Query: 121 FARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS-CK 178
               +AKRLVEKR KVLRSL+PGGEFM+DE LLIEE LDYI FL+AQVDGMRFLA+ CK
Sbjct: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

BLAST of MS007176 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.6e-24
Identity = 73/174 (41.95%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           M   + + + FL+KW++ L+ +  S     V ERKKAIK+SAD+AMAS R GTT WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQTKGRRRVGRRA---TRRSNFFPPS 120
           I K+  +      ++   + G+K   L  KK    +T   R++ RR+    RR +     
Sbjct: 61  IEKTATE---DNFLVRQMLSGIKAETLINKKLPK-KTVCHRKIVRRSKKILRRKSKSASE 120

Query: 121 KAFARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMR 172
           +A A+  AKRLV++R + LR++VPGGE M ++VLL++ETLDYI  L+ QV+ MR
Sbjct: 121 EAAAK--AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMR 168

BLAST of MS007176 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.1e-06
Identity = 50/154 (32.47%), Postives = 76/154 (49.35%), Query Frame = 0

Query: 24  ASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAIIAKSMKDRVPAELVLSHPVHGVK 83
           +S+++  +    +A++  AD A+A A  G T+WSRAI++K++K        L    H  K
Sbjct: 77  SSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVK--------LKFRKH--K 136

Query: 84  LSKLERKKTTMVQTKGRRRVGRRATRRSNFFPPSKAFARLVAKRL--VEKRRKVLRSLVP 143
             ++    TT + T   R   +RAT             RL AK L  V+++ KVL  LVP
Sbjct: 137 RQRISNPTTTTLTTGSIRSKKQRAT-----------VLRLKAKGLPAVQRKVKVLSRLVP 196

Query: 144 GGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS 176
           G       V+L EET DYI+ +  Q+  M  + S
Sbjct: 197 GCRKQSLPVVL-EETTDYIAAMEMQIRTMTAILS 208

BLAST of MS007176 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.6e-04
Identity = 50/161 (31.06%), Postives = 71/161 (44.10%), Query Frame = 0

Query: 16  RVDLKTYTASNTTMD--VSERKKAIKMSADLAMASARNGTTIWSRAIIAKSMKDRVPAEL 75
           RV  ++ T SN   D  VS   + I+ +AD  +A++  GTT WSRAI+A  ++       
Sbjct: 63  RVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVR------- 122

Query: 76  VLSHPVHGVKLSKLERKKTTMVQTKGRRRVGRRATRRSNFFPPSKAFARLVAKRLVEKRR 135
                    KL K  + K +    K R+  G   T R             +    VE++ 
Sbjct: 123 --------AKLKKHRKAKKSTGNCKSRK--GLTETNR-------------IKLPAVERKL 182

Query: 136 KVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLA 175
           K+L  LVPG   +    LL +E  DYI+ L  QV  M  LA
Sbjct: 183 KILGRLVPGCRKVSVPNLL-DEATDYIAALEMQVRAMEALA 192

BLAST of MS007176 vs. ExPASy TrEMBL
Match: A0A6J1DKD7 (transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-88
Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI
Sbjct: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQTKGRRRVGRRATRRSNFFPPSKAF 120
           IAKSMKDRVPAE+VLSHPVHGVKLSKL RKKTTMVQTKGRRRVGRRATRRSNFFPPSKAF
Sbjct: 61  IAKSMKDRVPAEIVLSHPVHGVKLSKLGRKKTTMVQTKGRRRVGRRATRRSNFFPPSKAF 120

Query: 121 ARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLASCK 178
           ARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLASCK
Sbjct: 121 ARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLASCK 177

BLAST of MS007176 vs. ExPASy TrEMBL
Match: A0A0A0LM92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.8e-46
Identity = 114/181 (62.98%), Postives = 135/181 (74.59%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTT-MDVSERKKAIKMSADLAMASARNGTTIWSRA 60
           MPNPNKLKQ+FL+KW V L++ T+S+TT M+  +RKKAIK+SAD AMA  R GTTIWS++
Sbjct: 1   MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61  IIAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQ-TKGRRRVGRRATRRSNFFPPSK 120
           IIAKS+K   P + +L+    G     L RKK TM Q  K  R++GRR  RRS   P SK
Sbjct: 61  IIAKSLKGHAPPKAILN---RGTIYINLLRKKRTMTQLQKMGRKIGRRMARRSR-LPSSK 120

Query: 121 AFARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS--C 178
              R +AKRLVEKR KVLRSL+PGGEFMEDEVLLIEE LDYI FL+AQVDGMRFLA+  C
Sbjct: 121 VLPRTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANYYC 177

BLAST of MS007176 vs. ExPASy TrEMBL
Match: A0A5D3CK75 (Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00030 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.1e-45
Identity = 110/179 (61.45%), Postives = 133/179 (74.30%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           MPNPNKLKQ+FL+ W V L++ T+S T M+  +RKKAIK+SAD AMA+ RNGTTIWS++I
Sbjct: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQ-TKGRRRVGRRATRRSNFFPPSKA 120
           IAKS+K   P E +L+     + L    RKK TM Q  K  R++GR+  RRS   P SKA
Sbjct: 61  IAKSLKGHAPPEAILNRRTSYINLL---RKKRTMTQLRKMGRKIGRKMARRSR-LPLSKA 120

Query: 121 FARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS-CK 178
               +AKRLVEKR KVLRSL+PGGEFM+DE LLIEE LDYI FL+AQVDGMRFLA+ CK
Sbjct: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

BLAST of MS007176 vs. ExPASy TrEMBL
Match: A0A1S3BT01 (uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 7.8e-44
Identity = 108/179 (60.34%), Postives = 131/179 (73.18%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           MPN NKLKQ+FL+ W V L++ T+S T M+  +RKKAIK+SAD AMA+ RNGTTIWS++I
Sbjct: 1   MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQ-TKGRRRVGRRATRRSNFFPPSKA 120
           IAK +K   P E +L+     + L    RKK TM Q  K  R++GR+  RRS   P SKA
Sbjct: 61  IAKYLKGHAPPEAILNRRTSYINLL---RKKRTMTQLRKMGRKIGRKMARRSR-LPLSKA 120

Query: 121 FARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS-CK 178
               +AKRLVEKR KVLRSL+PGGEFM+DE LLIEE LDYI FL+AQVDGMRFLA+ CK
Sbjct: 121 LPSTIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

BLAST of MS007176 vs. ExPASy TrEMBL
Match: A0A6J1HLT3 (transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465712 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 6.1e-41
Identity = 103/177 (58.19%), Postives = 122/177 (68.93%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           MPNP  LK+ FL+KW + L   T SNTTM+  ERKKAIK S+DLAMA+ RNG T WSRAI
Sbjct: 1   MPNPINLKRIFLKKWIMGLNPITFSNTTMNFLERKKAIKASSDLAMAATRNGATRWSRAI 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQTKGRRRVGRRATRRSNFFPPSKAF 120
           IAKS++    A+L               R+KTT+       ++GR+  RR      S++ 
Sbjct: 61  IAKSIQAPTEAKL---------------RRKTTL------HKIGRKLARRHTHSSRSRSV 120

Query: 121 ARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLASCK 178
           AR VAKRLV+KR KVLRSLVPGGEFMEDE LLI+E LDYISFLR QVDGMRFLA+CK
Sbjct: 121 ARSVAKRLVQKRTKVLRSLVPGGEFMEDEALLIDEALDYISFLRVQVDGMRFLANCK 156

BLAST of MS007176 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 111.7 bits (278), Expect = 6.1e-25
Identity = 73/174 (41.95%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           M   + + + FL+KW++ L+ +  S     V ERKKAIK+SAD+AMAS R GTT WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQTKGRRRVGRRA---TRRSNFFPPS 120
           I K+  +      ++   + G+K   L  KK    +T   R++ RR+    RR +     
Sbjct: 61  IEKTATE---DNFLVRQMLSGIKAETLINKKLPK-KTVCHRKIVRRSKKILRRKSKSASE 120

Query: 121 KAFARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMR 172
           +A A+  AKRLV++R + LR++VPGGE M ++VLL++ETLDYI  L+ QV+ MR
Sbjct: 121 EAAAK--AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMR 168

BLAST of MS007176 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 111.7 bits (278), Expect = 6.1e-25
Identity = 73/174 (41.95%), Postives = 108/174 (62.07%), Query Frame = 0

Query: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60
           M   + + + FL+KW++ L+ +  S     V ERKKAIK+SAD+AMAS R GTT WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQTKGRRRVGRRA---TRRSNFFPPS 120
           I K+  +      ++   + G+K   L  KK    +T   R++ RR+    RR +     
Sbjct: 61  IEKTATE---DNFLVRQMLSGIKAETLINKKLPK-KTVCHRKIVRRSKKILRRKSKSASE 120

Query: 121 KAFARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMR 172
           +A A+  AKRLV++R + LR++VPGGE M ++VLL++ETLDYI  L+ QV+ MR
Sbjct: 121 EAAAK--AKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMR 168

BLAST of MS007176 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-22
Identity = 68/172 (39.53%), Postives = 99/172 (57.56%), Query Frame = 0

Query: 5   NKLKQRFLEKWRVDLKTYTAS-NTTMDVSERKKAIKMSADLAMASARNGTTIWSRAIIAK 64
           N +KQ F++KW   L    +S    ++V+ERK AI++S+DLAMA+ARNG+T+WSRA+I++
Sbjct: 6   NMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRALISR 65

Query: 65  SMKDRVPAELVLSHPVHGVKLSKLERKKTTMVQTKGRRRVGRRATRRSNFFPPSKAFARL 124
           S                G K +     +  + + + R +      RR+  F         
Sbjct: 66  S----------------GNKTANKPMARRILKKARNRMKNRCNILRRNGNF--------- 125

Query: 125 VAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS 176
            AK  V KR  +L+SLVPGGE ++D+  LI ETLDYI +LRAQVD MR +A+
Sbjct: 126 TAKTWVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTVAA 152

BLAST of MS007176 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 52.0 bits (123), Expect = 5.7e-07
Identity = 50/154 (32.47%), Postives = 76/154 (49.35%), Query Frame = 0

Query: 24  ASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAIIAKSMKDRVPAELVLSHPVHGVK 83
           +S+++  +    +A++  AD A+A A  G T+WSRAI++K++K        L    H  K
Sbjct: 77  SSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVK--------LKFRKH--K 136

Query: 84  LSKLERKKTTMVQTKGRRRVGRRATRRSNFFPPSKAFARLVAKRL--VEKRRKVLRSLVP 143
             ++    TT + T   R   +RAT             RL AK L  V+++ KVL  LVP
Sbjct: 137 RQRISNPTTTTLTTGSIRSKKQRAT-----------VLRLKAKGLPAVQRKVKVLSRLVP 196

Query: 144 GGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS 176
           G       V+L EET DYI+ +  Q+  M  + S
Sbjct: 197 GCRKQSLPVVL-EETTDYIAAMEMQIRTMTAILS 208

BLAST of MS007176 vs. TAIR 10
Match: AT3G17100.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 52.0 bits (123), Expect = 5.7e-07
Identity = 50/154 (32.47%), Postives = 76/154 (49.35%), Query Frame = 0

Query: 24  ASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAIIAKSMKDRVPAELVLSHPVHGVK 83
           +S+++  +    +A++  AD A+A A  G T+WSRAI++K++K        L    H  K
Sbjct: 77  SSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVK--------LKFRKH--K 136

Query: 84  LSKLERKKTTMVQTKGRRRVGRRATRRSNFFPPSKAFARLVAKRL--VEKRRKVLRSLVP 143
             ++    TT + T   R   +RAT             RL AK L  V+++ KVL  LVP
Sbjct: 137 RQRISNPTTTTLTTGSIRSKKQRAT-----------VLRLKAKGLPAVQRKVKVLSRLVP 196

Query: 144 GGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS 176
           G       V+L EET DYI+ +  Q+  M  + S
Sbjct: 197 GCRKQSLPVVL-EETTDYIAAMEMQIRTMTAILS 208

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022153351.12.1e-8898.87transcription factor IBH1-like 1 [Momordica charantia][more]
XP_038890559.12.3e-5066.85transcription factor IBH1-like 1 [Benincasa hispida][more]
XP_004149100.15.9e-4662.98transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical prot... [more]
KAA0048635.12.2e-4561.45transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription f... [more]
XP_008452339.11.6e-4360.34PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Q9M0B98.6e-2441.95Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV... [more]
Q9LSN78.1e-0632.47Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=... [more]
O804827.6e-0431.06Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A6J1DKD71.0e-8898.87transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 ... [more]
A0A0A0LM922.8e-4662.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1[more]
A0A5D3CK751.1e-4561.45Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3BT017.8e-4460.34uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=... [more]
A0A6J1HLT36.1e-4158.19transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465712 PE=... [more]
Match NameE-valueIdentityDescription
AT4G30410.26.1e-2541.95sequence-specific DNA binding transcription factors [more]
AT4G30410.16.1e-2541.95sequence-specific DNA binding transcription factors [more]
AT5G57780.14.8e-2239.53EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arab... [more]
AT3G17100.15.7e-0732.47sequence-specific DNA binding transcription factors [more]
AT3G17100.25.7e-0732.47sequence-specific DNA binding transcription factors [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..177
NoneNo IPR availablePANTHERPTHR33124:SF5TRANSCRIPTION FACTOR IBH1-LIKE 1coord: 5..175
IPR044660Transcription factor IBH1-likePANTHERPTHR33124TRANSCRIPTION FACTOR IBH1-LIKE 1coord: 5..175
IPR044549Transcription factor IBH1-like, bHLH domainCDDcd11444bHLH_AtIBH1_likecoord: 126..174
e-value: 4.64297E-12
score: 56.4768

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS007176.1MS007176.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated