MS007156 (gene) Bitter gourd (TR) v1

Overview
NameMS007156
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionADP-ribosylation factor 1
Locationscaffold25: 1011741 .. 1015297 (-)
RNA-Seq ExpressionMS007156
SyntenyMS007156
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTTTGTTTACTCGGATGTTTTCTTCACTTTTCGGCAATAAGGAAGCTCGGATCCTTGTTCTTGGCCTCGATAATGCCGGCAAAACTACCATTCTCTGTGGGTTTCTCTAATTTTATTTTTTTCTTACGCCTTCGTGTTTTTTGGTTTGCGGTGATATTAGGATTCGTGATTTGGCGCCATGTTGTAATGCATTATTTTGAATGTTGTGCAGATCGGCTCCAGATGGGGGAGGTTGTCTCGACAATTCCAAGTTGGTATTCTTTCCAAATGTGATCTCGTGGTTCTCTTGCTTTGTGTACCTAGAGGAGGAGAGTTGGAATTAAATTTTATATGGGGGATGAGAAACAGTTTGTTAATCAAAATCATGAGAATTACAACTTTACTTTTCAATATTCATGTTTAGGAGTTATAGTTTTATAAATCATTTAATACTAACTAGCCAATGGTTAGAGCTTGGCCTCCTTCAGTTCTCTCTGGAGGTTTCTATAGTTTGAATTTTTGGTTTTCCCAGTGCTTTTCGTGTTTTCCTTTCTGCGGACTCCCCATCCCATTAGGAGAAGGGGAAAGATCGGAAATTACAACTTGAATGTGAAGAATTCAACTATGAGAAGCATTAAGTATCAACTTTAGTTTTTCAATTGTTTAATTGTAAATGGTGAAGAGTTGATTGGAAGAATCCGTGAATGGTTAGCCTAGGGATCCAAGGAGCAAGCTATAAATCTAGATTCTTTTAATATCATGGATTCAAACTATAGTAGGCAGTAGCCACTAGCCACTCATCTAAAATAATGGATATTTTGTGGAGATGTATTAATTCTGATGATTATCCTGGCTTTTTCTTGCTTTGAAGGTAGACTAATTTGGGATGGCTAAACCCTTTTTCCATTATGTGTGGGGTATTTGGTTTGAGAGGACATGCGAATTCTCTATAACTGAGTTGTTTTCCGTGGAGATATTGAACTAGGTTCAGCTTAATGCTTCACTTCGGATATCTTAGTTTTTAGGTTTATATGCTGTTCCTATTTTTTATTTCTATCACCAATTTATTAGAGGGTTTACTTTCTCGAGTCTTGTAAATTTTGTGGGGTGTGTTTTTGTGTTCCCAGTTGGTTCTTTGCTTGCTCTCAACGCCTTTACTTTCATAAATGAAAATTTCATTTGAAAATAATTGTTTCTTCCATTGCTTTCCTTCAGCTACTGGTCAAATATCTTATAAACTATCTCATTTTTTTTATGCAGCAATTGGATTTAATGTTGAAACTGTGCAGTATAATAACATCAAATTCCAGGTCTGGGATCTTGGTAAGCCAATCTAGGTCCTCCTAATATCTTTAAGTGAAGCTATGTGATCTCATGTTGTATCATTTCTTCATGACTACTCTCATGATATGGCAACACACTCAATGAAGGGGGGTGGGGAGAGGGAAAGGAGCATGTATTATTCTGCTAAATTGATGTATAAATGGAATTTGCAGATATTTAATGGTTTTCTTTCACAGTTTGGTTTTACCAACCAGTTATCAGTCATGAAATTAATTTAATCTTATTTGACTTATCTGAAAACAAACCAATTTCATTGGGAAAAAAATATTTATTTTAGCCATATGCTGCATATATCATAAACTTGTTAATCTCAAAGCATATTGTGTGTGTGTGTGTGTGATCACATGTGCATGCGTTTTTTACTTTGATGATCTTACAACTTGGGGTTAATATTAGCTTTGATTATTTTATCAAGTCTATCCAAGTATGTAAGTTATATCACTCATATCTTTTTATTGTTGCTTATGCAGGAGGACAGACTAGTATCAGGTTAGTCTTTTCTGTTCGTTAGCTCTAATTCTAGTTACTCTTGGAATTCATATCTGATGGTTGATGAGGGAATGGGTAGTTCTTTTTTAAGTACCGGGAAAGGTAGAATTTAATGTCATCTGTTTAACAAGGTAGGGGCTTGTAGGTCGTTGCATATTGGTGTTAATGATTTGTATAACATGTGCAGCCTTGAAAAGTATTGTAGAAATTCATCTCAGGTTTTCACTTTTCATTTTTGTTTTGGTTTTCAACTCTTTCTTTTTCCATTATGGATAATATCTTATATCCTCATTATTACACGATTACAGATAACCTATATTATTCTTTTACCCATACTATCGTCTTTCACAGAGTTTCCTATCACAATTAGTAACCTGGAGCTTTTCCACAAGGAAATGAAACGAGGATAGATAAACTTGTTCACTTGAACCTGAATCAGACTTCATATATAGGCTCCATTTTGGTCGTGTGTCAACAAGATATTGTTCCTAAAGTTGACTAATTGGTGTACTTGTGAATTGATACTTCAGCTCATCTATGTCGTACTTGTGTATTTAACTATAATTGGTTCTCTACATGAACTTCTTTTTTCCCTGTCCTTTATATTTTCTCCTTTTTTTAAATGGTTCAAGCTAACTAGTTGCCTGCCTTGTGTGGTAGACCATACTGGAGATGCTATTTTCCAAATACTCAAGCTATAATCTATGTGGTTGATTCAAGTGATACTGATAGGCTGGTGGTAGCGAAAGAAGAGTTTCATGCAATACTTGAGGTACAGTATGGTTCATTCCAAGTTTAAAGTGGGACTGCAAAATGTGGTTATTTGTCAACTGAGCTGGTGTACTCAAGTTTCTAGAATTTTGCAATGAAAATCCATATGATTCATGCATTTTATTATTGTAAGGTTTATAGAATATTTTAAAAAATGCTGAGTAACATCTGAATTCATTGTTAGTGGAACGTATCATCATTGGCATGGAGCAATATCCAGTCTTGAGATGTCAGTATAGTATGTTTATATCACTTTCTTTTTCTTCAGTTTCCTTGTCATGCATAAGAAATAAATTAGATGTCTCCGACTGTCTGACATTGAACTTTGGTGTGGGTTGTTAATTTGTTTGTTTGGCAAGTGTTTGGCAAGTGTCCCGTTTTCAGTAGTTTTCTGTTAGCCAGTTCCAATAGTTCTTCTTTTGGGTGGTTGTGCAGGAAGAAGAGTTGCGGGGTGCGGTTGCCCTAGTTTTCGCTAATAAGCAGGTTAGGGCGTTGCCTGTTATTTACTTATCATTTTTTGTAACTATACAATGTGAGAAATGAATCATCTATGGATGAATAGTACAAACAAAACAATTACTAGAGAAAGTAATTCTTATTTCTGTCAAAACACACTTGAAACTTGAAAGCAGTAATTCTTATGAACTTCACAACCCAATTTTTTTCGAGTTTGAAAACTATTTTTGTAGCTGTTTCTCAAAACCATAACACAAGGTCCAAGACCTGGCCTTCGTGATTGTGTAAAGAGTTTGATATCAAACTATTAATCTAGTTTCTACTCTTCTATCTTTTTTTTTTAATTTTTTTTATTTTATATTATCTTCCCATTGTTTAGGATCTTCCTGGTGCACTTGATGATGCTGCAGTCACAGAGGCTTTAGAGTTGCACAAGATCAAGAACCGCCAATGGGCTATATTTAAAGCTTCTGCTATAAAAGGAGAAGGTCTTTTCGAGGGATTGGATTGG

mRNA sequence

ATGGGGATTTTGTTTACTCGGATGTTTTCTTCACTTTTCGGCAATAAGGAAGCTCGGATCCTTGTTCTTGGCCTCGATAATGCCGGCAAAACTACCATTCTCTATCGGCTCCAGATGGGGGAGGTTGTCTCGACAATTCCAACAATTGGATTTAATGTTGAAACTGTGCAGTATAATAACATCAAATTCCAGTTGCCTGCCTTGTGTGGTAGACCATACTGGAGATGCTATTTTCCAAATACTCAAGCTATAATCTATGTGGTTGATTCAAGTGATACTGATAGGCTGGTGGTAGCGAAAGAAGAGTTTCATGCAATACTTGAGGAAGAAGAGTTGCGGGGTGCGGTTGCCCTAGTTTTCGCTAATAAGCAGGATCTTCCTGGTGCACTTGATGATGCTGCAGTCACAGAGGCTTTAGAGTTGCACAAGATCAAGAACCGCCAATGGGCTATATTTAAAGCTTCTGCTATAAAAGGAGAAGGTCTTTTCGAGGGATTGGATTGG

Coding sequence (CDS)

ATGGGGATTTTGTTTACTCGGATGTTTTCTTCACTTTTCGGCAATAAGGAAGCTCGGATCCTTGTTCTTGGCCTCGATAATGCCGGCAAAACTACCATTCTCTATCGGCTCCAGATGGGGGAGGTTGTCTCGACAATTCCAACAATTGGATTTAATGTTGAAACTGTGCAGTATAATAACATCAAATTCCAGTTGCCTGCCTTGTGTGGTAGACCATACTGGAGATGCTATTTTCCAAATACTCAAGCTATAATCTATGTGGTTGATTCAAGTGATACTGATAGGCTGGTGGTAGCGAAAGAAGAGTTTCATGCAATACTTGAGGAAGAAGAGTTGCGGGGTGCGGTTGCCCTAGTTTTCGCTAATAAGCAGGATCTTCCTGGTGCACTTGATGATGCTGCAGTCACAGAGGCTTTAGAGTTGCACAAGATCAAGAACCGCCAATGGGCTATATTTAAAGCTTCTGCTATAAAAGGAGAAGGTCTTTTCGAGGGATTGGATTGG

Protein sequence

MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQLPALCGRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW
Homology
BLAST of MS007156 vs. NCBI nr
Match: XP_022997467.1 (ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_022997468.1 ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_022997469.1 ADP-ribosylation factor 1-like [Cucurbita maxima] >KAG6598858.1 ADP-ribosylation factor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322.0 bits (824), Expect = 3.0e-84
Identity = 164/172 (95.35%), Postives = 165/172 (95.93%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
           ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW
Sbjct: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 172

BLAST of MS007156 vs. NCBI nr
Match: XP_022153337.1 (ADP-ribosylation factor 1 [Momordica charantia])

HSP 1 Score: 322.0 bits (824), Expect = 3.0e-84
Identity = 164/172 (95.35%), Postives = 165/172 (95.93%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
           ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW
Sbjct: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 172

BLAST of MS007156 vs. NCBI nr
Match: XP_004149069.1 (ADP-ribosylation factor 1 [Cucumis sativus] >XP_008452088.1 PREDICTED: ADP-ribosylation factor 1 [Cucumis melo] >XP_038890939.1 ADP-ribosylation factor 1 [Benincasa hispida] >XP_038890940.1 ADP-ribosylation factor 1 [Benincasa hispida] >XP_038890941.1 ADP-ribosylation factor 1 [Benincasa hispida] >KGN61108.1 hypothetical protein Csa_021187 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84
Identity = 163/172 (94.77%), Postives = 165/172 (95.93%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQAIIYVVDSSDTDRLVVA+EEFHAILEEEELRGAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAREEFHAILEEEELRGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
           ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW
Sbjct: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 172

BLAST of MS007156 vs. NCBI nr
Match: XP_022929741.1 (ADP-ribosylation factor 1-like [Cucurbita moschata] >XP_022929742.1 ADP-ribosylation factor 1-like [Cucurbita moschata] >XP_022929743.1 ADP-ribosylation factor 1-like [Cucurbita moschata])

HSP 1 Score: 320.5 bits (820), Expect = 8.8e-84
Identity = 163/172 (94.77%), Postives = 165/172 (95.93%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
           ALVFANKQDLPGALDDAAVTEALELH+IKNRQWAIFKASAIKGEGLFEGLDW
Sbjct: 121 ALVFANKQDLPGALDDAAVTEALELHEIKNRQWAIFKASAIKGEGLFEGLDW 172

BLAST of MS007156 vs. NCBI nr
Match: XP_022937826.1 (ADP-ribosylation factor 1 [Cucurbita moschata] >XP_022965973.1 ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_023538132.1 ADP-ribosylation factor 1 [Cucurbita pepo subsp. pepo] >KAG6586202.1 ADP-ribosylation factor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.5 bits (820), Expect = 8.8e-84
Identity = 162/172 (94.19%), Postives = 165/172 (95.93%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQAIIYVVDSSDTDRLV+AKEEFHAILEEEELRGAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVIAKEEFHAILEEEELRGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
           ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW
Sbjct: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 172

BLAST of MS007156 vs. ExPASy Swiss-Prot
Match: Q96361 (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARF1 PE=2 SV=3)

HSP 1 Score: 308.1 bits (788), Expect = 5.9e-83
Identity = 153/172 (88.95%), Postives = 161/172 (93.60%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQA+IYVVDSSDTDR+ VAKEEFHAILEEEEL+GAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
            L+FANKQDLPGALDDAAVTEALELHKIK+RQWAIFK  A+KGEGLFEGLDW
Sbjct: 121 VLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDW 172

BLAST of MS007156 vs. ExPASy Swiss-Prot
Match: P40940 (ADP-ribosylation factor 3 OS=Arabidopsis thaliana OX=3702 GN=ARF3 PE=1 SV=2)

HSP 1 Score: 307.0 bits (785), Expect = 1.3e-82
Identity = 152/172 (88.37%), Postives = 161/172 (93.60%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQA+IYVVDSSDTDR+ VAKEEFHAILEE+EL+GAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
            L+FANKQDLPGALDDAAVTEALELHKIK+RQWAIFK  A+KGEGLFEGLDW
Sbjct: 121 VLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDW 172

BLAST of MS007156 vs. ExPASy Swiss-Prot
Match: P61211 (ADP-ribosylation factor-like protein 1 OS=Mus musculus OX=10090 GN=Arl1 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-54
Identity = 106/172 (61.63%), Postives = 131/172 (76.16%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MG  F+ +FSSLFG +E RIL+LGLD AGKTTILYRLQ+GEVV+TIPTIGFNVETV Y N
Sbjct: 1   MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           +KFQ+  L G    RPYWRCY+ NT A+IYVVDS D DR+ ++K E  A+LEEEELR A+
Sbjct: 61  LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
            +VFANKQD+  A+  + +  AL L  +K+R+W IFK SA KG GL E ++W
Sbjct: 121 LVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEW 172

BLAST of MS007156 vs. ExPASy Swiss-Prot
Match: P61212 (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-54
Identity = 106/172 (61.63%), Postives = 131/172 (76.16%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MG  F+ +FSSLFG +E RIL+LGLD AGKTTILYRLQ+GEVV+TIPTIGFNVETV Y N
Sbjct: 1   MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           +KFQ+  L G    RPYWRCY+ NT A+IYVVDS D DR+ ++K E  A+LEEEELR A+
Sbjct: 61  LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
            +VFANKQD+  A+  + +  AL L  +K+R+W IFK SA KG GL E ++W
Sbjct: 121 LVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEW 172

BLAST of MS007156 vs. ExPASy Swiss-Prot
Match: P40616 (ADP-ribosylation factor-like protein 1 OS=Homo sapiens OX=9606 GN=ARL1 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.6e-54
Identity = 105/172 (61.05%), Postives = 131/172 (76.16%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MG  F+ +FSSLFG +E RIL+LGLD AGKTTILYRLQ+GEVV+TIPTIGFNVETV Y N
Sbjct: 1   MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           +KFQ+  L G    RPYWRCY+ NT A+IYVVDS D DR+ ++K E  A+LEEEELR A+
Sbjct: 61  LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAI 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
            +VFANKQD+  A+  + +  +L L  +K+R+W IFK SA KG GL E ++W
Sbjct: 121 LVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEW 172

BLAST of MS007156 vs. ExPASy TrEMBL
Match: A0A6J1KDZ9 (ADP-ribosylation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492376 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 164/172 (95.35%), Postives = 165/172 (95.93%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
           ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW
Sbjct: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 172

BLAST of MS007156 vs. ExPASy TrEMBL
Match: A0A6J1DIL7 (ADP-ribosylation factor 1 OS=Momordica charantia OX=3673 GN=LOC111020854 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 164/172 (95.35%), Postives = 165/172 (95.93%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
           ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW
Sbjct: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 172

BLAST of MS007156 vs. ExPASy TrEMBL
Match: A0A0A0LH74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049970 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 163/172 (94.77%), Postives = 165/172 (95.93%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQAIIYVVDSSDTDRLVVA+EEFHAILEEEELRGAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAREEFHAILEEEELRGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
           ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW
Sbjct: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 172

BLAST of MS007156 vs. ExPASy TrEMBL
Match: A0A1S3BT35 (ADP-ribosylation factor 1 OS=Cucumis melo OX=3656 GN=LOC103493197 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 163/172 (94.77%), Postives = 165/172 (95.93%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQAIIYVVDSSDTDRLVVA+EEFHAILEEEELRGAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAREEFHAILEEEELRGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
           ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW
Sbjct: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 172

BLAST of MS007156 vs. ExPASy TrEMBL
Match: A0A6J1EP05 (ADP-ribosylation factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436238 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84
Identity = 163/172 (94.77%), Postives = 165/172 (95.93%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
           ALVFANKQDLPGALDDAAVTEALELH+IKNRQWAIFKASAIKGEGLFEGLDW
Sbjct: 121 ALVFANKQDLPGALDDAAVTEALELHEIKNRQWAIFKASAIKGEGLFEGLDW 172

BLAST of MS007156 vs. TAIR 10
Match: AT2G24765.1 (ADP-ribosylation factor 3 )

HSP 1 Score: 307.0 bits (785), Expect = 9.4e-84
Identity = 152/172 (88.37%), Postives = 161/172 (93.60%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQA+IYVVDSSDTDR+ VAKEEFHAILEE+EL+GAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
            L+FANKQDLPGALDDAAVTEALELHKIK+RQWAIFK  A+KGEGLFEGLDW
Sbjct: 121 VLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDW 172

BLAST of MS007156 vs. TAIR 10
Match: AT2G24765.2 (ADP-ribosylation factor 3 )

HSP 1 Score: 222.6 bits (566), Expect = 2.3e-58
Identity = 112/128 (87.50%), Postives = 119/128 (92.97%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MGILFTRMFSS+FGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN
Sbjct: 1   MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           IKFQ+  L G    RPYWRCYFPNTQA+IYVVDSSDTDR+ VAKEEFHAILEE+EL+GAV
Sbjct: 61  IKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAV 120

Query: 121 ALVFANKQ 125
            L+FANKQ
Sbjct: 121 VLIFANKQ 128

BLAST of MS007156 vs. TAIR 10
Match: AT5G14670.1 (ADP-ribosylation factor A1B )

HSP 1 Score: 210.7 bits (535), Expect = 9.2e-55
Identity = 102/172 (59.30%), Postives = 130/172 (75.58%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MG+ FT++FS LF  KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y N
Sbjct: 1   MGLNFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           I F +  + G    RP WR YF NTQ +I+VVDS+D DR+V A++E H +L E+ELR AV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
            LVFANKQDLP A++ A +T+ L LH ++ R W I    A  GEGL+EGLDW
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172

BLAST of MS007156 vs. TAIR 10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 209.1 bits (531), Expect = 2.7e-54
Identity = 101/172 (58.72%), Postives = 129/172 (75.00%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MG+ F ++FS LF  KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y N
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           I F +  + G    RP WR YF NTQ +I+VVDS+D DR+V A++E H +L E+ELR AV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
            LVFANKQDLP A++ A +T+ L LH ++ R W I    A  GEGL+EGLDW
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172

BLAST of MS007156 vs. TAIR 10
Match: AT1G23490.1 (ADP-ribosylation factor 1 )

HSP 1 Score: 209.1 bits (531), Expect = 2.7e-54
Identity = 101/172 (58.72%), Postives = 129/172 (75.00%), Query Frame = 0

Query: 1   MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNN 60
           MG+ F ++FS LF  KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y N
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IKFQLPALCG----RPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAV 120
           I F +  + G    RP WR YF NTQ +I+VVDS+D DR+V A++E H +L E+ELR AV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 ALVFANKQDLPGALDDAAVTEALELHKIKNRQWAIFKASAIKGEGLFEGLDW 169
            LVFANKQDLP A++ A +T+ L LH ++ R W I    A  GEGL+EGLDW
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022997467.13.0e-8495.35ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_022997468.1 ADP-ribosylati... [more]
XP_022153337.13.0e-8495.35ADP-ribosylation factor 1 [Momordica charantia][more]
XP_004149069.16.8e-8494.77ADP-ribosylation factor 1 [Cucumis sativus] >XP_008452088.1 PREDICTED: ADP-ribos... [more]
XP_022929741.18.8e-8494.77ADP-ribosylation factor 1-like [Cucurbita moschata] >XP_022929742.1 ADP-ribosyla... [more]
XP_022937826.18.8e-8494.19ADP-ribosylation factor 1 [Cucurbita moschata] >XP_022965973.1 ADP-ribosylation ... [more]
Match NameE-valueIdentityDescription
Q963615.9e-8388.95ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARF1 PE... [more]
P409401.3e-8288.37ADP-ribosylation factor 3 OS=Arabidopsis thaliana OX=3702 GN=ARF3 PE=1 SV=2[more]
P612111.5e-5461.63ADP-ribosylation factor-like protein 1 OS=Mus musculus OX=10090 GN=Arl1 PE=1 SV=... [more]
P612121.5e-5461.63ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=... [more]
P406162.6e-5461.05ADP-ribosylation factor-like protein 1 OS=Homo sapiens OX=9606 GN=ARL1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1KDZ91.5e-8495.35ADP-ribosylation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492376 PE=3 ... [more]
A0A6J1DIL71.5e-8495.35ADP-ribosylation factor 1 OS=Momordica charantia OX=3673 GN=LOC111020854 PE=3 SV... [more]
A0A0A0LH743.3e-8494.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049970 PE=3 SV=1[more]
A0A1S3BT353.3e-8494.77ADP-ribosylation factor 1 OS=Cucumis melo OX=3656 GN=LOC103493197 PE=3 SV=1[more]
A0A6J1EP054.3e-8494.77ADP-ribosylation factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436238 PE=... [more]
Match NameE-valueIdentityDescription
AT2G24765.19.4e-8488.37ADP-ribosylation factor 3 [more]
AT2G24765.22.3e-5887.50ADP-ribosylation factor 3 [more]
AT5G14670.19.2e-5559.30ADP-ribosylation factor A1B [more]
AT1G70490.12.7e-5458.72Ras-related small GTP-binding family protein [more]
AT1G23490.12.7e-5458.72ADP-ribosylation factor 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 115..136
score: 28.07
coord: 19..42
score: 56.86
coord: 47..71
score: 30.82
IPR006689Small GTPase superfamily, ARF/SAR typeSMARTSM00178sar_sub_1coord: 4..168
e-value: 3.3E-17
score: 73.2
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 5..168
e-value: 6.1E-64
score: 214.7
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..168
e-value: 2.1E-72
score: 256.6
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..168
NoneNo IPR availablePANTHERPTHR11711:SF380ADP-RIBOSYLATION FACTOR 1coord: 1..168
NoneNo IPR availablePROSITEPS51417ARFcoord: 11..168
score: 18.015669
NoneNo IPR availableCDDcd04151Arl1coord: 19..168
e-value: 5.82174E-104
score: 292.775
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 6..168
e-value: 1.4E-61
score: 209.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..168
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..161
e-value: 3.0E-14
score: 51.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS007156.1MS007156.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding