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MS007048 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAATGTAAACTCCATTGGCTTAAAGAAGGTGATGAAAACAGTAAGTTCTTTCATAGATACTTGGCTGCCCGTAAAAGAAAAGCACAGATTTGTGAAATTAAAGATGAGCAGAATACCTCGCTAGTGAATAAAAGGGAAATTGAAACTGAAATCATGAGGTTTTTCGAGAATTTATACAATAGTGAA CAAAAATGTAAACTCCATTGGCTTAAAGAAGGTGATGAAAACAGTAAGTTCTTTCATAGATACTTGGCTGCCCGTAAAAGAAAAGCACAGATTTGTGAAATTAAAGATGAGCAGAATACCTCGCTAGTGAATAAAAGGGAAATTGAAACTGAAATCATGAGGTTTTTCGAGAATTTATACAATAGTGAA CAAAAATGTAAACTCCATTGGCTTAAAGAAGGTGATGAAAACAGTAAGTTCTTTCATAGATACTTGGCTGCCCGTAAAAGAAAAGCACAGATTTGTGAAATTAAAGATGAGCAGAATACCTCGCTAGTGAATAAAAGGGAAATTGAAACTGAAATCATGAGGTTTTTCGAGAATTTATACAATAGTGAA QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE Homology
BLAST of MS007048 vs. NCBI nr
Match: XP_038884536.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Benincasa hispida]) HSP 1 Score: 67.4 bits (163), Expect = 5.0e-08 Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of MS007048 vs. NCBI nr
Match: XP_038884537.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Benincasa hispida]) HSP 1 Score: 67.4 bits (163), Expect = 5.0e-08 Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of MS007048 vs. NCBI nr
Match: XP_038884535.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida]) HSP 1 Score: 67.4 bits (163), Expect = 5.0e-08 Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of MS007048 vs. NCBI nr
Match: KAE8648478.1 (hypothetical protein Csa_008296, partial [Cucumis sativus]) HSP 1 Score: 65.5 bits (158), Expect = 1.9e-07 Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of MS007048 vs. NCBI nr
Match: XP_031097151.1 (uncharacterized protein LOC116001411 [Ipomoea triloba]) HSP 1 Score: 63.5 bits (153), Expect = 7.3e-07 Identity = 28/63 (44.44%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of MS007048 vs. ExPASy TrEMBL
Match: A0A5D3C5A3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00260 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.0e-07 Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of MS007048 vs. ExPASy TrEMBL
Match: A0A484L3U0 (Reverse transcriptase domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS12773 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.9e-06 Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of MS007048 vs. ExPASy TrEMBL
Match: A0A803QGT5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.1e-06 Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of MS007048 vs. ExPASy TrEMBL
Match: A0A151RAJ1 (Transposon TX1 uncharacterized OS=Cajanus cajan OX=3821 GN=KK1_039182 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.7e-06 Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of MS007048 vs. ExPASy TrEMBL
Match: A0A803P465 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.7e-06 Identity = 31/62 (50.00%), Postives = 37/62 (59.68%), Query Frame = 0
BLAST of MS007048 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein ) HSP 1 Score: 41.6 bits (96), Expect = 2.8e-04 Identity = 17/63 (26.98%), Postives = 39/63 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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