![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS007047 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGCTCCAAGGATGTAGGTTGGGCATGTTTGAATTCGGAAGGTAAATCAGGAGGTATTTTATCTTTATGGGATGAAAGCAGAATCGCAGTATCTGAAGTTCTAGAAGGCACTTGCTCAATTAGTATAGTAGTCTCTCTTTCCAATTTGAATAATGTGGTGATAACAAATGTTTATGGCCCAACAGATTACAGAGATAGTAAGCGATTATGGTCAGAACTCAGGGATATTTCAGGCTTCAGTGAAAAATTCTGGTGCTTGGGTGGTGATTTTAACGTATCAAGATGGCCTTCAGACAGATCTTCAGGGGGACGTATTACTAGGAGCATGAGAAAATTTAATTGTATCATTGGAGAGCTTGACCTTACGGAGGTTCCCTTATCT AGCTCCAAGGATGTAGGTTGGGCATGTTTGAATTCGGAAGGTAAATCAGGAGGTATTTTATCTTTATGGGATGAAAGCAGAATCGCAGTATCTGAAGTTCTAGAAGGCACTTGCTCAATTAGTATAGTAGTCTCTCTTTCCAATTTGAATAATGTGGTGATAACAAATGTTTATGGCCCAACAGATTACAGAGATAGTAAGCGATTATGGTCAGAACTCAGGGATATTTCAGGCTTCAGTGAAAAATTCTGGTGCTTGGGTGGTGATTTTAACGTATCAAGATGGCCTTCAGACAGATCTTCAGGGGGACGTATTACTAGGAGCATGAGAAAATTTAATTGTATCATTGGAGAGCTTGACCTTACGGAGGTTCCCTTATCT AGCTCCAAGGATGTAGGTTGGGCATGTTTGAATTCGGAAGGTAAATCAGGAGGTATTTTATCTTTATGGGATGAAAGCAGAATCGCAGTATCTGAAGTTCTAGAAGGCACTTGCTCAATTAGTATAGTAGTCTCTCTTTCCAATTTGAATAATGTGGTGATAACAAATGTTTATGGCCCAACAGATTACAGAGATAGTAAGCGATTATGGTCAGAACTCAGGGATATTTCAGGCTTCAGTGAAAAATTCTGGTGCTTGGGTGGTGATTTTAACGTATCAAGATGGCCTTCAGACAGATCTTCAGGGGGACGTATTACTAGGAGCATGAGAAAATTTAATTGTATCATTGGAGAGCTTGACCTTACGGAGGTTCCCTTATCT SSKDVGWACLNSEGKSGGILSLWDESRIAVSEVLEGTCSISIVVSLSNLNNVVITNVYGPTDYRDSKRLWSELRDISGFSEKFWCLGGDFNVSRWPSDRSSGGRITRSMRKFNCIIGELDLTEVPLS Homology
BLAST of MS007047 vs. NCBI nr
Match: XP_022154822.1 (uncharacterized protein LOC111021983 [Momordica charantia]) HSP 1 Score: 144.1 bits (362), Expect = 8.5e-31 Identity = 75/127 (59.06%), Postives = 78/127 (61.42%), Query Frame = 0
BLAST of MS007047 vs. NCBI nr
Match: XP_038876676.1 (uncharacterized protein LOC120069076 [Benincasa hispida]) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-21 Identity = 57/127 (44.88%), Postives = 81/127 (63.78%), Query Frame = 0
BLAST of MS007047 vs. NCBI nr
Match: XP_031739979.1 (uncharacterized protein LOC116403332 [Cucumis sativus]) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20 Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 0
BLAST of MS007047 vs. NCBI nr
Match: TYJ98683.1 (hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]) HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20 Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 0
BLAST of MS007047 vs. NCBI nr
Match: XP_019074274.1 (PREDICTED: uncharacterized protein LOC109122247 [Vitis vinifera]) HSP 1 Score: 106.3 bits (264), Expect = 2.0e-19 Identity = 50/126 (39.68%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of MS007047 vs. ExPASy TrEMBL
Match: A0A6J1DMQ9 (uncharacterized protein LOC111021983 OS=Momordica charantia OX=3673 GN=LOC111021983 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 4.1e-31 Identity = 75/127 (59.06%), Postives = 78/127 (61.42%), Query Frame = 0
BLAST of MS007047 vs. ExPASy TrEMBL
Match: A0A5D3BHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00120 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 6.6e-21 Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 0
BLAST of MS007047 vs. ExPASy TrEMBL
Match: A5CAA2 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_030956 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 9.6e-20 Identity = 50/126 (39.68%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of MS007047 vs. ExPASy TrEMBL
Match: A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 9.6e-20 Identity = 50/126 (39.68%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of MS007047 vs. ExPASy TrEMBL
Match: A0A438GQR2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_053795 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 9.6e-20 Identity = 50/126 (39.68%), Postives = 81/126 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|