MS006517 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTCAACAGTGCTCGCCAATATTGGTCAGCGCGACCCGATCCTCCATGTGACAAAAGATGCGAAGGATGGTCATCGGTCCGAATGGATCCCGATTCGCACTATCGAGGACCCCTACGTTCAAGAAGTTGCAAAGTTCGCTGTGGCAGAGTTCGACATGGAGAAAATGGCGAACTTCCAATACAAGCGCTTGCTACGTTGCTGGATTAGGGAGGAGGAGATGGGAGGCATAAAATATCGCCTTATTCTCGAGGTAAAAGACGACGCTCCAACACCGAAACTCGGCGGGAAATATGAGGCTATTGTGTGGGAGGCCTCGGGTCGTCTCATAATAAGGAAGCTGAAGCTCATATCTTTCATGCCTTGCCTTCATGGGGCTGAT ATGATTTCAACAGTGCTCGCCAATATTGGTCAGCGCGACCCGATCCTCCATGTGACAAAAGATGCGAAGGATGGTCATCGGTCCGAATGGATCCCGATTCGCACTATCGAGGACCCCTACGTTCAAGAAGTTGCAAAGTTCGCTGTGGCAGAGTTCGACATGGAGAAAATGGCGAACTTCCAATACAAGCGCTTGCTACGTTGCTGGATTAGGGAGGAGGAGATGGGAGGCATAAAATATCGCCTTATTCTCGAGGTAAAAGACGACGCTCCAACACCGAAACTCGGCGGGAAATATGAGGCTATTGTGTGGGAGGCCTCGGGTCGTCTCATAATAAGGAAGCTGAAGCTCATATCTTTCATGCCTTGCCTTCATGGGGCTGAT ATGATTTCAACAGTGCTCGCCAATATTGGTCAGCGCGACCCGATCCTCCATGTGACAAAAGATGCGAAGGATGGTCATCGGTCCGAATGGATCCCGATTCGCACTATCGAGGACCCCTACGTTCAAGAAGTTGCAAAGTTCGCTGTGGCAGAGTTCGACATGGAGAAAATGGCGAACTTCCAATACAAGCGCTTGCTACGTTGCTGGATTAGGGAGGAGGAGATGGGAGGCATAAAATATCGCCTTATTCTCGAGGTAAAAGACGACGCTCCAACACCGAAACTCGGCGGGAAATATGAGGCTATTGTGTGGGAGGCCTCGGGTCGTCTCATAATAAGGAAGCTGAAGCTCATATCTTTCATGCCTTGCCTTCATGGGGCTGAT MISTVLANIGQRDPILHVTKDAKDGHRSEWIPIRTIEDPYVQEVAKFAVAEFDMEKMANFQYKRLLRCWIREEEMGGIKYRLILEVKDDAPTPKLGGKYEAIVWEASGRLIIRKLKLISFMPCLHGAD Homology
BLAST of MS006517 vs. NCBI nr
Match: KAG6588760.1 (hypothetical protein SDJN03_17325, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 196.8 bits (499), Expect = 1.1e-46 Identity = 96/123 (78.05%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of MS006517 vs. NCBI nr
Match: KAA0031436.1 (Cystatin domain containing protein [Cucumis melo var. makuwa] >TYK06887.1 Cystatin domain containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 194.5 bits (493), Expect = 5.6e-46 Identity = 101/127 (79.53%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of MS006517 vs. NCBI nr
Match: KGN43767.1 (hypothetical protein Csa_017208 [Cucumis sativus]) HSP 1 Score: 192.6 bits (488), Expect = 2.1e-45 Identity = 98/128 (76.56%), Postives = 108/128 (84.38%), Query Frame = 0
BLAST of MS006517 vs. NCBI nr
Match: KAG6571859.1 (hypothetical protein SDJN03_28587, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011544.1 hypothetical protein SDJN02_26450, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 182.2 bits (461), Expect = 2.9e-42 Identity = 92/124 (74.19%), Postives = 99/124 (79.84%), Query Frame = 0
BLAST of MS006517 vs. NCBI nr
Match: KAG6571861.1 (Cysteine proteinase inhibitor 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-09 Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0
BLAST of MS006517 vs. ExPASy Swiss-Prot
Match: Q6TPK4 (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 3.4e-06 Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 0
BLAST of MS006517 vs. ExPASy Swiss-Prot
Match: P86472 (Cysteine proteinase inhibitor 1 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CYT1 PE=1 SV=2) HSP 1 Score: 52.4 bits (124), Expect = 4.5e-06 Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 0
BLAST of MS006517 vs. ExPASy Swiss-Prot
Match: Q10Q47 (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210100 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 8.4e-05 Identity = 34/94 (36.17%), Postives = 50/94 (53.19%), Query Frame = 0
BLAST of MS006517 vs. ExPASy TrEMBL
Match: A0A5A7SN35 (Cystatin domain containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001920 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.7e-46 Identity = 101/127 (79.53%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of MS006517 vs. ExPASy TrEMBL
Match: A0A0A0K644 (Cystatin domain containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G066240 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.0e-45 Identity = 98/128 (76.56%), Postives = 108/128 (84.38%), Query Frame = 0
BLAST of MS006517 vs. ExPASy TrEMBL
Match: A0A6J0L5R2 (cysteine proteinase inhibitor 5-like OS=Raphanus sativus OX=3726 GN=LOC108826602 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08 Identity = 38/108 (35.19%), Postives = 57/108 (52.78%), Query Frame = 0
BLAST of MS006517 vs. ExPASy TrEMBL
Match: A0A0D3E795 (Cysteine proteinase inhibitor OS=Brassica oleracea var. oleracea OX=109376 GN=106317161 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.8e-08 Identity = 35/94 (37.23%), Postives = 53/94 (56.38%), Query Frame = 0
BLAST of MS006517 vs. ExPASy TrEMBL
Match: A0A2P2NS36 (Cysteine proteinase inhibitor OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.8e-08 Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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