MS006514 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTGAAAATTAATACTGACGTTGCAATCAGACTCGATGAAAATCGTATGGGTTTTGGTGCTATGATCCGTAATTCTAAGGGAGAAATTATGCTTACTCTTGCAAAAGAAGTTGGGTGTGTATACGATCCAGCAATAGAAGAGGCGTCGGCGATTAGGGATGGATCGACAGAAGCGATTGAGCTTGGCTTCTTTAATTTGGAGGTGGAGTCGGATTCTCTTCAGGTGATCATGAAGATTAAGAACCCTCAGCCTGACACGATTTGGAGCTCGGTT CTGAAAATTAATACTGACGTTGCAATCAGACTCGATGAAAATCGTATGGGTTTTGGTGCTATGATCCGTAATTCTAAGGGAGAAATTATGCTTACTCTTGCAAAAGAAGTTGGGTGTGTATACGATCCAGCAATAGAAGAGGCGTCGGCGATTAGGGATGGATCGACAGAAGCGATTGAGCTTGGCTTCTTTAATTTGGAGGTGGAGTCGGATTCTCTTCAGGTGATCATGAAGATTAAGAACCCTCAGCCTGACACGATTTGGAGCTCGGTT CTGAAAATTAATACTGACGTTGCAATCAGACTCGATGAAAATCGTATGGGTTTTGGTGCTATGATCCGTAATTCTAAGGGAGAAATTATGCTTACTCTTGCAAAAGAAGTTGGGTGTGTATACGATCCAGCAATAGAAGAGGCGTCGGCGATTAGGGATGGATCGACAGAAGCGATTGAGCTTGGCTTCTTTAATTTGGAGGTGGAGTCGGATTCTCTTCAGGTGATCATGAAGATTAAGAACCCTCAGCCTGACACGATTTGGAGCTCGGTT LKINTDVAIRLDENRMGFGAMIRNSKGEIMLTLAKEVGCVYDPAIEEASAIRDGSTEAIELGFFNLEVESDSLQVIMKIKNPQPDTIWSSV Homology
BLAST of MS006514 vs. NCBI nr
Match: XP_042964529.1 (uncharacterized protein LOC122298728 [Carya illinoinensis]) HSP 1 Score: 69.3 bits (168), Expect = 1.9e-08 Identity = 32/81 (39.51%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of MS006514 vs. NCBI nr
Match: TXG48983.1 (hypothetical protein EZV62_024858 [Acer yangbiense]) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-07 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0
BLAST of MS006514 vs. NCBI nr
Match: XP_042962682.1 (uncharacterized protein LOC122296954 [Carya illinoinensis]) HSP 1 Score: 65.5 bits (158), Expect = 2.8e-07 Identity = 28/88 (31.82%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of MS006514 vs. NCBI nr
Match: XP_018826560.1 (uncharacterized protein LOC108995438 [Juglans regia] >KAF5477039.1 hypothetical protein F2P56_003718 [Juglans regia]) HSP 1 Score: 64.3 bits (155), Expect = 6.2e-07 Identity = 32/88 (36.36%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of MS006514 vs. NCBI nr
Match: XP_024039172.1 (uncharacterized protein LOC112097823 [Citrus clementina]) HSP 1 Score: 63.9 bits (154), Expect = 8.1e-07 Identity = 37/82 (45.12%), Postives = 48/82 (58.54%), Query Frame = 0
BLAST of MS006514 vs. ExPASy TrEMBL
Match: A0A5C7GW84 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024858 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0
BLAST of MS006514 vs. ExPASy TrEMBL
Match: A0A2I4F4I0 (uncharacterized protein LOC108995438 OS=Juglans regia OX=51240 GN=LOC108995438 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.0e-07 Identity = 32/88 (36.36%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of MS006514 vs. ExPASy TrEMBL
Match: A0A5C7GQX3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06 Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 0
BLAST of MS006514 vs. ExPASy TrEMBL
Match: A0A6A6L732 (RNase H domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_003594 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06 Identity = 32/81 (39.51%), Postives = 49/81 (60.49%), Query Frame = 0
BLAST of MS006514 vs. ExPASy TrEMBL
Match: A0A2P5ENY9 (Ribonuclease H-like domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_169030 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06 Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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