MS006448 (gene) Bitter gourd (TR) v1

Overview


Name	MS006448
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger CCCH domain-containing protein 37
Location	scaffold327: 676792 .. 684855 (+)
RNA-Seq Expression	MS006448
Synteny	MS006448

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATCAACTGCACGGTTACAACTCTGCCTACGGCGTGGGACCTGCCACTGCCACTCCGTCTCTTCCCAGCACATACTCGTCTTCCCGTTCCCTCGCCGACATTGTTTCCGGCCGTTACCTCGTGTCAGACTCGCTGTCCTCCGGTATCTCCATTAAGCACTCTGTAACTGATCGAGGTGCCTCCATGTATTCGACCCAGAAAGAAGCCCTTAGGTTATCCGCCGCCGACATTGTTCCAAGAACGTCGCATTTGGTGTCTCAATACTCATGGTCGGGTACTGATGTTGCTGCTGCGCTTGACTCTGTTGTTTCTGGCGTAAAACGTTCTTCCGACGGTAAGTTTTATTCTCTTTCCATTTCAATCTCTTAGAAAACCACCTAAAAGACGGCGTAAAATAATTAGTTGGGTACTAGGAGATTGACTTTAAGTGTCGCAAAACGAGGCCGAATCTATGGACTTCTGCTTTCAGGAAACAGAACCGATAGAATTCTTAAATACGTTTTGATTCTTTTTCATGCGTTCATCTAACCACCAAATGGCATTCGAGATCATACGGCGGCTTCAGTGCTTCGATTCGTTCCGTTCGCTGTTTTTTCCTTTATATTATTTTTTGTAAAGTAATATTTTTCTCGTGTTTCTTTTCCCAATTGACTTTAGATATGATTTGTGATAGAAAAACGCTATAATGTTCTTGTCATTTAATTTTATTCCATATCTTTGACATATTGGACGAAAGTTAACCCGAATAGTTCAATACCAGTAGAAAAAGATAGATGTCCTCATCCTAGTACGTTCTCTCTGTTATGGCAAGTGGAATTTACTTATTCCTTTCGTAACAAAATATTTTATACAGAAGCCATATTTCTTCTCTGGAGATTGGAACAATGGTGTTATAAGTCTCCAGTCATTCATTCACGTGTTCTCTTATTTCATATACATAATTTTATGTATGGGGTTGACGTAATGGTTTGTTTTCATACTGTTGCTACACATTTAATTTGCACCGCATCACTATGAAGCAGTCTTAAATTGATATGATTTTTCACAGTTTTCATTTTTAATTAAAGTTTCAAAGGTCCTAAATTCTATCCCTCATCCGGACTGTTTATTTTTATTATATATATTTTTTCAAATTTTCTATTTTACATAATCTACTATATTTAATTTCTAAATATAAACAGCCAGAAAAGTAGTTTTAGATGTACTTATATAGTAACGTATATGTTTGTCTTTCTTGTACATATTTGTCTACTATGTACAATAGTGCTCTACGATCAGACTGTTTTGGGTTCCTGTAACACTTTGGGGCAAAGTGAAGCTTGGTATACTTCAAATTCTTTAGCCAAGCGTCCTAGATTTGAAAGTACAAGCAATTTGCCTGTATATCCGCAGAGGCCAGGAGAGAAGGACTGTGCCCACTATATGCTCACAAGAACCTGTAAATTTGGAGATAGCTGCAAATTTGACCATCCTATTTGGGTTCCCGAAGGTGGAATCCCAGATTGGAAAGAGGTGACTGTTTACTGTTATATTTTATACCTATAAAAAAGAATTATTATCCAGAAATCACCAAATACTTCACTGGTGTATTATATATGCTTAAAACTAAGGGTGAGTGATCTGGGGTTTTGTGTTAGTAATTTGATGATATCTTGATTTTGTGCTGTAATCAATGCCGCCTTTTCTCTATGCTAGGTTTAAAAATTGATCTTCTCTTGTTCTAGTTTAATATATGATTATGAAAACATCTTTCTGTAAATTGGGACGCAGTGCTAGCCGTCTATCAATTTTATTGATGTGGGGCAATTTAGTAAATCAATTATCTCAAGTAATTTCTGGATTTGAAGATTTTGAAGTGCATTTGGATGATTATTGGAAGGTATGGTCCATGGATCTACTTCTATATGGGTAGGATAATAGTTTATGGAATTCTATTAGGTTTTCAAGTGCGGCCTATTAGTTTCCATTGGAATTTTATTTAGATTTCGACTTTTCAGTTTTAACAAATGTAGCTTTTTCATTAAGTTATTTTTTGTTGAGAATTTATGAATGAAAGATTTATAGTTGTGCATGTTTTCTCTTTCCATTTTGTATTCTTTCCTTCTATTCTTGCGTCTTATATGGTGAAACCATAAGGACTAGGTGCCTTATTCTTGCCATGATCTTTAACCGCTTGCCAAATTTTTGCTTCCTCAAATTTTCTTTCCAGCCAAGAACAATTCAGAATTGAAATGGGAGAAAAACGCCTCAACTCATCTGATGCCACTGGGAGAAAAACGTTGAAGCGGTACAATCGATCAAAGAAACCTAAGATTTTAGTTTCCATCTCTCTCTGATTGATAAGAAAAGTCCCTTGTGCATTCTTCACCTCAGAGATAAATTTCGCAAAACTTTTGAATAAAGTTCCTCTCTTCCCAAATACACAAACTTAGCAAGTTTGTTTGAAGAGAACACCTCTTCTCCGCTTCTTGTGAGGAAATACCAGAAATTTCTTCCTTTTGACTCAATGGATGATATTTCTTCTATGATTTGAACTTCTTTCTCCTTTTTCTTCTTTTCATTCTGCATTGGCCACAGTTTGAGCGAGTTTCTCAAGTTTCTGAATTTGCAAAACTATATGAATCCTACCCACGATAAGAAGTATTCTTAGCAAGTTTAGATTTTTTTTTTTTTTTTTTGATCAAGATACAATTTTTTCATTGATGTATGAAAAGAAATAAATTTTTCAAAGATACAAACTCTCGAAGGAGTGAAAGAGTAATAAAAAAGAGTAACAAATACATATAAAAGAGCCGATACAAGAAAAAGTTTGGAAGAAACAAGAAAAGATAAGTTGATGAACAAACTTCAAAAATCTTTGACAATCAATCGTGCAAAGAGAGTGAAGCAATCCCTTCAAACGGGAAAATAAGACCTCAAAAGACTAACTTCGAGAAAAATTAACTTTTGGCTTTCAGCGCGTTACATCTAGATAACACGGACACGCTCAAAATGACAAAGTGTTCGTGTCAGACTTCAAGACTCTTTCTTTTCTACGTTATGAAAGTTATTGGACTACTCAATTACTTGGTTTTGGGAGGATGGTTGGATTAGAGATAGCACCTTTTCCTTCTTTCCCTCACCTATATCACCTTTATTCAAGTTTGCTCATGTGACTTCTATCCTCTTCTATTGGGGATTATGTGTTATACAACTTTAGCTTTCTTTGCCTGTCCTCAAATGAGGAGGTGCTTCCCAAAAATGATAGATGATTGGATGGTTGAAGTGCTTCACAGGTGGACTCTTCCTAAAAAGGCTAAGTTTATTTGGAAGTGTGCTTCAAGGGCTCTCCTATGGAGTCTATGGCTGGAAAGGAATTCTCGCATGTTCGAAGATAAGTCGACTACTTTTGGTTTTTTTTGTAGGAATGTACAGCACATGACCTCTTGGTGGTGCATCACTTATAGTAAATTCTTTTGTAACTACAATCTTTCCATGTTTATGAACAATTGGGAAGCGGTTGTTTATTTCGTTTGGTGGGGTTCCCTCTACCCCAGCCTCTAGTTTGTTTCTCTTTTTTTTGATCAATACAGATATGTTTCTTATCTAAAAAAAAAAAACCTGTGATATNAATCGGTTTTAGTGATGAAGTTGTGGACTCCCAGTCCTTCTTGGGGGTTTTTGTGAAGCTCGTCCTATCTTTTATGCAATTCACACCCTTATGTCCCCTGTTCATTCTTTTTTGTTGCGAAAGGTTTGGATCTCCAAATTTTCTCGGACAAGCCTAATTCTTTTGAATACTTTTGTGATATTGTAAAGTTTATAGCCGCTAATTGGAGTGGTCAACACAAGTTATTTTGTAACTACTCAACTTATACTATTGGTTTAGATTGGAGTTTGGACGGTCTTCATGTAGCCTCAATTTGATAGAAGGCTCATCTTGTCCCTTTGTCCTTTAGGCTGTTTCTCCCCAGCTGACTTTTTGAATGAAAGTTGACTTTGTTTCTTATCAAAGAAGAAAAGGGAAAGGAAAGGTTAGGATCTCCAACAAGGTCGAGCTTGGTAGGTACATAATGGTAGGATTAACACCATTGATTATGTGTAGGGGTCTAGGTTGTATCGATATGTGATACATGATTGTGCTTAAGAGGATCTGGATCATGGCATTTTGTGCACTTAATCTGGACAATGTTTTTTTGGAGCCTTTTGGTGTATCTTTGATCCATAAGAGTTGTTGTCTTCTTTATTTTTATATTTATTTTATTTAACAAGAACTTTTCATTGAATTAATGAAAAAAAATGTTCAAAGATTCAACCTTAGAGGGAGGAAACACACAAAAGAACTAAGAATTAAGCTTCTAATATAAAAGCATTCCATCCTTTCGAGAGTTTGTATCTTTAAACAATTTTGGTTCATTTTAATTTATTTGTGAACAGTTCGTTTCTTGTTAAAAAAAATATAAAGCATTCCAATTTAAAAAGATAACCCTTGATGGTGGTGTTGTTCCACAAACTACTTTGGGACAAGGGAGGGGCTCTTTGATGTGCAACTTTATTTTGCTATTTGGGAACTATCTAGCTTGGCCACCATTTTGTTGCCAAGTTGGACACCTAGTCGAGAAAGGAGTAAATGAATTGCAATTGTTCCTTGTACAATACATGATAAATAATGAGTATGATTAATGTTTCTGAATATCTTTGTCCCGAATTCTTTTGCACTTGTTGCCTGGAGGTGGCTTGCACTTTTATTTCCACGTTATTTTTTCCAATGGTTGTCCATCTCATCTATAATTTATTTAGGTCCCACAAATAGCTAATAATGAAGATCTTCCAGAAAGACCCGGGGAGCCAGATTGTCCTGTGAGTTCTATTATAACTAGTTTCTCTTTGTATCTCTTTTTGAAGTATTAAGCACTTATTTCGCCTACTTTAGTTCACGGCCTTTTCAATTCCTGCAGTACTTTTTGAAAACTCAAAGATGTAAATTTGGCTCAAGGTGCAAGTTCAATCACCCTAAAGATAGATCTGATTCTGTGGTAAGTTGTATGAACCCAAAGTCTTGAAACTGTATTTTTGTCTTGGATACCATTTTTTTTTTTAATTTTTTAATCTTGTGTTGATATAATTTTATCTTTTAACTATTTTCAGGGTGCTGAGAAATCTGATGTTTCAGCATTACCTGAGAGACCATCCGAGCCACTGTGTGCAGTAATATACACATACATACACATGCACACACATTCTTTACTAGCCATTTTTAAAGTGTGCAAGTCGGATATTGACATATTGCTCAATTATTTTTCCTTGCAGTTTTATGTTAAAACTGGAAAGTGCAAATTTGGTGTTAACTGCAAGTTCCATCACCCAAAAGATATCCTAGTTTTATCTGGGGCAGAAAATGGAAATAGCGAACAAACTCTGATGGAAGCTAAGATAGAAGGAGGAATTGGAGACTTCAAGCTTGTTAAGCCTCCTGTTTCATTTCCACCAGCACTGATACACAATTCTAAAGGACTTCCAATTAGACTGGTAATGTATTGGATAACATTTATGAAAATCCTTCTCAATGAAAGCATTGTTTCTCATAAAAAAAAAAACATTTATGGAAATCCAAATATTTGTTTTCATCCCAAAGGATGCTAGTATTTTTCTTTTTCTTTTACAAGAAACAACCTATAAAAAACCTTTCATTGATAAATGGAAAGGAAAAATGCTCAGGTACAAGCCCTCAAAGGTGAAAAAGAAAGAAAAAAAACAAAAGAAGAAAAGAAGTGCAACGAGGAACAATACAATCATAACAAATAAGAAAGAACATTAAGAAAGCCAAAAAACCACCAACAAAAGACTCTTCAAAGCATTCAGCTTTCTCACACTTCCTTTTATTCCAATCTCTTTGAGCTAACATTGGATAACATTGGAAGAGTTCGATCAAACCTTGAATTTCATGCTCTACCTTCTTTTGTGTTGCCAATTACTTCATTCTCTGGAACTTATGATTAAATTTTTATTGAAACAAAACCTTATTTTTGCAATTTGTTAATTATTATTATTATCATCGTTTTTATTCTTTCTAAATGAAAAGAACAACTTTAATTGAGAACGAATGGAAGGAAACAGGACCTAAAATTTATCAAATAATTTGCTTCTAACAGGGTGAAGTGGATTGTCCATTCTACTTGAAAACTGGCAGGTATATGAGCACATACAACTAATTTGTTAATAGTACCACTTCAGAATATTACCAATGAGTCTTATGTTTATTGATTGTTATGTATTAGTTGCAAGTATGGTACCAGTTGCCGCTACAATCACCCTGACAGAAACGGTATGCATGTAATGTTCTTGTTTGCAGTTTTAAAACTTGGAAAGGTATGCAATGATGGCTTAATATATGCTTGGGACTTTTGGGCAGCAATCAATTCATGCAATGCAACAATGGTTCATCCTGCTATGGTCTCAGCATCTAATATGAATATTGGACTTGTTAATCCGTCTAATGCTATTTATCAAGCAATTAATCCCAGATTGATTCAGCCACCTGTAAGTCAGTCTTAGTCTTGGGGGTAGTGTTGATTTTATGGCTCTTAGTATTTTTTCACTCAATTGATCCCTTGTTTTTACTTCTAAATTTGTCCAGTTTGATGGTTGTTATATTATTTCTCTTGCATGCCTTTCATGTTCCTCAATGAAAGCTCGGTATCTTTTGAAAGGAAAAAATAGCCCATTGAATTGATGTCCTATTGGGTCTTGTGCTGCATTGTTTTCACTGAAAATTCCTTTATTTTGAACATGTTAATTAAACATTAATAGAAGTGCTTCTGAGTATCCGGATTTTCTGAAATTCATTACAAAAGCATCACGTTTGAACTTCTGAGGTTTATGAATCTTCTTGGGGTGATAGTTGATTCATGCTATTTTGCTTTATGTTGCAGTTAGGATCCAGCTCAAGTATTTACCCTCAACGACCTGGGCAGATAGAATGTGATGTGAGAACCTACTCACCCTCCTCTGATAGGTTCTCTAGAGAGTCTCAATAAGAAAAAGCGATGGTCTTCTTTTCATTGTTTCTAACTTTTTTTTTTAAAAAAAAAATTTATTTTAAACAAGATACGAACTTCTCATTGATTAATGAAAGGGAATAAAATTGTTCAAGGATACAATCTTCCAAAGAGATTTTTTTTCTTCTTCTTTTCGAGACACCCTCTATATAAAATACATTAATATATATAGTGAAGAACCAAGAGAGAGGGAGAGAGTGGAGAAAGGACGGAGAGGATGAGGTGGGAGAGAGAGCTTACTATTATATAAAAGCTTAGATGATGTGAAAAAAAAAATCATGAGATAGCAAGGGTGTGGGTATATTTAAACTGGATGAAAATTTGAGGAAAAGTTGTTCAATGGTCCCAAAAGGACAAGATTGGAGGGATGAAGGAGTTTGTTGCATATAAATGTAAGATTCCCTTAAAAAGAAGCTATGGCTTCTGTTTCCTTACTTGTTAAACATGTAAATACCACAAAACATATGAAAAGATCTTGCATTGGAACATAGCACACACATTTGGGATGATGACCCAATTAGGGCCACACTTTTAAGCCTTTCAAATGTGCTGGCTCCTTCCAAAAGTATTTTCCGAGCCAACAAATTTACTTTTCCAGGACACTCGGTTTTCCACAGTGTGCCATTTTCACTTAAAAATAAAACAAAACAAAGAACTAATATCCTAAATTAGCACACATCTCAAAACATACATGCAAGATTTATGTCATTACCTCAACACGACCAATGTAGAACATTACAACTATCCGTGTCCATGTTATTAATATTAGTTCTCGTTCTTTTATTGTTTTTGAGTTGAATCTTTTATTGTTTTGTTGATATGCTCTTTCACTCTTAAATATCTTATTTTATAGTATTATATGAAGACTGGGGACTGTAAATTTGGGGAAAGATGCAAATTTCATCACCCTATTGATCGGTCAGCACCAAAGCAGGCTGCTCAACAAAACGTCAAATTGACACTAGCAGGCCTACCCAGGAGAGAGGTATATATCTGCTTGTGCCTTGTTAAGTTCACCTTA

mRNA sequence

ATGGCTAATCAACTGCACGGTTACAACTCTGCCTACGGCGTGGGACCTGCCACTGCCACTCCGTCTCTTCCCAGCACATACTCGTCTTCCCGTTCCCTCGCCGACATTGTTTCCGGCCGTTACCTCGTGTCAGACTCGCTGTCCTCCGGTATCTCCATTAAGCACTCTGTAACTGATCGAGGTGCCTCCATGTATTCGACCCAGAAAGAAGCCCTTAGGTTATCCGCCGCCGACATTGTTCCAAGAACGTCGCATTTGGTGTCTCAATACTCATGGTCGGGTACTGATGTTGCTGCTGCGCTTGACTCTGTTGTTTCTGGCGTAAAACGTTCTTCCGACGTGCTCTACGATCAGACTGTTTTGGGTTCCTGTAACACTTTGGGGCAAAGTGAAGCTTGGTATACTTCAAATTCTTTAGCCAAGCGTCCTAGATTTGAAAGTACAAGCAATTTGCCTGTATATCCGCAGAGGCCAGGAGAGAAGGACTGTGCCCACTATATGCTCACAAGAACCTGTAAATTTGGAGATAGCTGCAAATTTGACCATCCTATTTGGGTTCCCGAAGGTGGAATCCCAGATTGGAAAGAGGTCCCACAAATAGCTAATAATGAAGATCTTCCAGAAAGACCCGGGGAGCCAGATTGTCCTTACTTTTTGAAAACTCAAAGATGTAAATTTGGCTCAAGGTGCAAGTTCAATCACCCTAAAGATAGATCTGATTCTGTGGGTGCTGAGAAATCTGATGTTTCAGCATTACCTGAGAGACCATCCGAGCCACTGTGTGCATTTTATGTTAAAACTGGAAAGTGCAAATTTGGTGTTAACTGCAAGTTCCATCACCCAAAAGATATCCTAGTTTTATCTGGGGCAGAAAATGGAAATAGCGAACAAACTCTGATGGAAGCTAAGATAGAAGGAGGAATTGGAGACTTCAAGCTTGTTAAGCCTCCTGTTTCATTTCCACCAGCACTGATACACAATTCTAAAGGACTTCCAATTAGACTGGGTGAAGTGGATTGTCCATTCTACTTGAAAACTGGCAGTTGCAAGTATGGTACCAGTTGCCGCTACAATCACCCTGACAGAAACGCAATCAATTCATGCAATGCAACAATGGTTCATCCTGCTATGGTCTCAGCATCTAATATGAATATTGGACTTGTTAATCCGTCTAATGCTATTTATCAAGCAATTAATCCCAGATTGATTCAGCCACCTTTAGGATCCAGCTCAAGTATTTACCCTCAACGACCTGGGCAGATAGAATGTGATTATTATATGAAGACTGGGGACTGTAAATTTGGGGAAAGATGCAAATTTCATCACCCTATTGATCGGTCAGCACCAAAGCAGGCTGCTCAACAAAACGTCAAATTGACACTAGCAGGCCTACCCAGGAGAGAGGTATATATCTGCTTGTGCCTTGTTAAGTTCACCTTA

Coding sequence (CDS)

ATGGCTAATCAACTGCACGGTTACAACTCTGCCTACGGCGTGGGACCTGCCACTGCCACTCCGTCTCTTCCCAGCACATACTCGTCTTCCCGTTCCCTCGCCGACATTGTTTCCGGCCGTTACCTCGTGTCAGACTCGCTGTCCTCCGGTATCTCCATTAAGCACTCTGTAACTGATCGAGGTGCCTCCATGTATTCGACCCAGAAAGAAGCCCTTAGGTTATCCGCCGCCGACATTGTTCCAAGAACGTCGCATTTGGTGTCTCAATACTCATGGTCGGGTACTGATGTTGCTGCTGCGCTTGACTCTGTTGTTTCTGGCGTAAAACGTTCTTCCGACGTGCTCTACGATCAGACTGTTTTGGGTTCCTGTAACACTTTGGGGCAAAGTGAAGCTTGGTATACTTCAAATTCTTTAGCCAAGCGTCCTAGATTTGAAAGTACAAGCAATTTGCCTGTATATCCGCAGAGGCCAGGAGAGAAGGACTGTGCCCACTATATGCTCACAAGAACCTGTAAATTTGGAGATAGCTGCAAATTTGACCATCCTATTTGGGTTCCCGAAGGTGGAATCCCAGATTGGAAAGAGGTCCCACAAATAGCTAATAATGAAGATCTTCCAGAAAGACCCGGGGAGCCAGATTGTCCTTACTTTTTGAAAACTCAAAGATGTAAATTTGGCTCAAGGTGCAAGTTCAATCACCCTAAAGATAGATCTGATTCTGTGGGTGCTGAGAAATCTGATGTTTCAGCATTACCTGAGAGACCATCCGAGCCACTGTGTGCATTTTATGTTAAAACTGGAAAGTGCAAATTTGGTGTTAACTGCAAGTTCCATCACCCAAAAGATATCCTAGTTTTATCTGGGGCAGAAAATGGAAATAGCGAACAAACTCTGATGGAAGCTAAGATAGAAGGAGGAATTGGAGACTTCAAGCTTGTTAAGCCTCCTGTTTCATTTCCACCAGCACTGATACACAATTCTAAAGGACTTCCAATTAGACTGGGTGAAGTGGATTGTCCATTCTACTTGAAAACTGGCAGTTGCAAGTATGGTACCAGTTGCCGCTACAATCACCCTGACAGAAACGCAATCAATTCATGCAATGCAACAATGGTTCATCCTGCTATGGTCTCAGCATCTAATATGAATATTGGACTTGTTAATCCGTCTAATGCTATTTATCAAGCAATTAATCCCAGATTGATTCAGCCACCTTTAGGATCCAGCTCAAGTATTTACCCTCAACGACCTGGGCAGATAGAATGTGATTATTATATGAAGACTGGGGACTGTAAATTTGGGGAAAGATGCAAATTTCATCACCCTATTGATCGGTCAGCACCAAAGCAGGCTGCTCAACAAAACGTCAAATTGACACTAGCAGGCCTACCCAGGAGAGAGGTATATATCTGCTTGTGCCTTGTTAAGTTCACCTTA

Protein sequence

MANQLHGYNSAYGVGPATATPSLPSTYSSSRSLADIVSGRYLVSDSLSSGISIKHSVTDRGASMYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLYDQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRNAINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQRPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRREVYICLCLVKFTL

Homology

[Close]

BLAST of MS006448 vs. NCBI nr
Match: XP_022147901.1 (zinc finger CCCH domain-containing protein 37 isoform X1 [Momordica charantia])

HSP 1 Score: 856.7 bits (2212), Expect = 9.8e-245
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 64  MYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLYDQTVLGS 123
           MYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLYDQTVLGS
Sbjct: 1   MYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLYDQTVLGS 60

Query: 124 CNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP 183
           CNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP
Sbjct: 61  CNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP 120

Query: 184 IWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVG 243
           IWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVG
Sbjct: 121 IWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVG 180

Query: 244 AEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAK 303
           AEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAK
Sbjct: 181 AEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAK 240

Query: 304 IEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRN 363
           IEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRN
Sbjct: 241 IEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRN 300

Query: 364 AINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQRPGQIEC 423
           AINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQRPGQIEC
Sbjct: 301 AINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQRPGQIEC 360

Query: 424 DYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 469
           DYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE
Sbjct: 361 DYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 405

[Close]

BLAST of MS006448 vs. NCBI nr
Match: XP_038888751.1 (zinc finger CCCH domain-containing protein 37 isoform X2 [Benincasa hispida])

HSP 1 Score: 853.2 bits (2203), Expect = 1.1e-243
Identity = 415/472 (87.92%), Postives = 431/472 (91.31%), Query Frame = 0


Query: 1   MANQLHGYNSAYGVGPATAT----PSLPSTYSSSRSLADIVSGRYLVSDSLSSGISIKHS 60
           MANQLHGYNS YG  PATAT    P+L +TYSSSRSL+DIVSGRYL+ DSLSS +SIKHS
Sbjct: 1   MANQLHGYNSVYGAAPATATATAAPTLSTTYSSSRSLSDIVSGRYLLPDSLSSSLSIKHS 60

Query: 61  VTDRGASMYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLY 120
           VTDR ASM+STQKEAL LSAADIVPRTSHLVS +SW G+DVA ALDSVVSG+KRSSDVLY
Sbjct: 61  VTDR-ASMFSTQKEALMLSAADIVPRTSHLVSSFSWPGSDVAVALDSVVSGIKRSSDVLY 120

Query: 121 DQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180
           DQTVLGS NTLGQSEAWY+SNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD
Sbjct: 121 DQTVLGSYNTLGQSEAWYSSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180

Query: 181 SCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPK 240
           SCKFDHPIWVPEGGIPDWKEVPQIAN EDLPER GEPDCPYFLKTQRCKFGSRCKFNHPK
Sbjct: 181 SCKFDHPIWVPEGGIPDWKEVPQIANGEDLPERLGEPDCPYFLKTQRCKFGSRCKFNHPK 240

Query: 241 DRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSE 300
           DRSDSVGAEKSD   LPERPSEPLCAFYVKTG CKF VNCKFHHPKDI  LSG ENGNSE
Sbjct: 241 DRSDSVGAEKSDALTLPERPSEPLCAFYVKTGNCKFSVNCKFHHPKDIQTLSGEENGNSE 300

Query: 301 QTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCR 360
           QTLM AK E  IGDFKLVKPPVSF PALIHNSKGLPIR GEVDCPFYLKTGSCKYGT+CR
Sbjct: 301 QTLM-AKTEERIGDFKLVKPPVSFSPALIHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCR 360

Query: 361 YNHPDRNAINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQ 420
           YNHPDRNAIN     MVHPAMVSA+NMN G+VNPSNAIYQA++PRLIQP LGSSSSIYPQ
Sbjct: 361 YNHPDRNAINPSTPAMVHPAMVSAANMNTGIVNPSNAIYQAVDPRLIQPLLGSSSSIYPQ 420

Query: 421 RPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 469
           RPGQIECD+YMKTGDCKFGERCKFHHPIDRSAPKQ AQQ VKLTLAGLPRRE
Sbjct: 421 RPGQIECDFYMKTGDCKFGERCKFHHPIDRSAPKQGAQQTVKLTLAGLPRRE 470

[Close]

BLAST of MS006448 vs. NCBI nr
Match: XP_004148293.1 (zinc finger CCCH domain-containing protein 37 isoform X1 [Cucumis sativus] >KAE8646123.1 hypothetical protein Csa_016154 [Cucumis sativus])

HSP 1 Score: 845.1 bits (2182), Expect = 2.9e-241
Identity = 406/472 (86.02%), Postives = 427/472 (90.47%), Query Frame = 0


Query: 1   MANQLHGYNSAYGV----GPATATPSLPSTYSSSRSLADIVSGRYLVSDSLSSGISIKHS 60
           MANQLH YNSAYG       ATA PSLP+TYS+SRSL+DIVSGRYL+ DSLSSGISIKHS
Sbjct: 1   MANQLHSYNSAYGAVSASATATAVPSLPTTYSTSRSLSDIVSGRYLLPDSLSSGISIKHS 60

Query: 61  VTDRGASMYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLY 120
           VTDRG SMYSTQKE   LS+ADIVPRTSHLVSQ+SW G+ VAAALDSVVSG+KRSSDVLY
Sbjct: 61  VTDRGTSMYSTQKEGPMLSSADIVPRTSHLVSQFSWPGSHVAAALDSVVSGIKRSSDVLY 120

Query: 121 DQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180
           DQTVLGS NTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD
Sbjct: 121 DQTVLGSYNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180

Query: 181 SCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPK 240
           SCKFDHPIWVPEGGIPDWKEVPQIAN+EDLPER G+PDCPYFLKTQRCKFGSRCKFNHPK
Sbjct: 181 SCKFDHPIWVPEGGIPDWKEVPQIANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPK 240

Query: 241 DRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSE 300
           DRSDSVGAEKSD S+LPERPSEPLCAFYVKTG CKFG+NCKFHHPKDI +LSG E GNSE
Sbjct: 241 DRSDSVGAEKSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSE 300

Query: 301 QTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCR 360
           QTLM  K E   GDFKLVKPP+S  PA++HNSKGLPIR GEVDCPFYLKTGSCKYGT+CR
Sbjct: 301 QTLM-VKTEERAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCR 360

Query: 361 YNHPDRNAINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQ 420
           YNHPDRNAIN     MVHPAMVS +NMN G VNPSNAIYQA++PRLIQP LGS SSIYPQ
Sbjct: 361 YNHPDRNAINPSTPAMVHPAMVSTANMNTGFVNPSNAIYQAVDPRLIQPLLGSGSSIYPQ 420

Query: 421 RPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 469
           RPGQIECD+YMKTGDCKFGERCKFHHPIDRSAPKQ A  NVKLTLAGLPRRE
Sbjct: 421 RPGQIECDFYMKTGDCKFGERCKFHHPIDRSAPKQGALHNVKLTLAGLPRRE 471

[Close]

BLAST of MS006448 vs. NCBI nr
Match: XP_031744499.1 (zinc finger CCCH domain-containing protein 37 isoform X3 [Cucumis sativus])

HSP 1 Score: 845.1 bits (2182), Expect = 2.9e-241
Identity = 406/472 (86.02%), Postives = 427/472 (90.47%), Query Frame = 0


Query: 1   MANQLHGYNSAYGV----GPATATPSLPSTYSSSRSLADIVSGRYLVSDSLSSGISIKHS 60
           MANQLH YNSAYG       ATA PSLP+TYS+SRSL+DIVSGRYL+ DSLSSGISIKHS
Sbjct: 1   MANQLHSYNSAYGAVSASATATAVPSLPTTYSTSRSLSDIVSGRYLLPDSLSSGISIKHS 60

Query: 61  VTDRGASMYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLY 120
           VTDRG SMYSTQKE   LS+ADIVPRTSHLVSQ+SW G+ VAAALDSVVSG+KRSSDVLY
Sbjct: 61  VTDRGTSMYSTQKEGPMLSSADIVPRTSHLVSQFSWPGSHVAAALDSVVSGIKRSSDVLY 120

Query: 121 DQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180
           DQTVLGS NTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD
Sbjct: 121 DQTVLGSYNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180

Query: 181 SCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPK 240
           SCKFDHPIWVPEGGIPDWKEVPQIAN+EDLPER G+PDCPYFLKTQRCKFGSRCKFNHPK
Sbjct: 181 SCKFDHPIWVPEGGIPDWKEVPQIANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPK 240

Query: 241 DRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSE 300
           DRSDSVGAEKSD S+LPERPSEPLCAFYVKTG CKFG+NCKFHHPKDI +LSG E GNSE
Sbjct: 241 DRSDSVGAEKSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSE 300

Query: 301 QTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCR 360
           QTLM  K E   GDFKLVKPP+S  PA++HNSKGLPIR GEVDCPFYLKTGSCKYGT+CR
Sbjct: 301 QTLM-VKTEERAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCR 360

Query: 361 YNHPDRNAINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQ 420
           YNHPDRNAIN     MVHPAMVS +NMN G VNPSNAIYQA++PRLIQP LGS SSIYPQ
Sbjct: 361 YNHPDRNAINPSTPAMVHPAMVSTANMNTGFVNPSNAIYQAVDPRLIQPLLGSGSSIYPQ 420

Query: 421 RPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 469
           RPGQIECD+YMKTGDCKFGERCKFHHPIDRSAPKQ A  NVKLTLAGLPRRE
Sbjct: 421 RPGQIECDFYMKTGDCKFGERCKFHHPIDRSAPKQGALHNVKLTLAGLPRRE 471

[Close]

BLAST of MS006448 vs. NCBI nr
Match: XP_022952579.1 (zinc finger CCCH domain-containing protein 37 isoform X1 [Cucurbita moschata])

HSP 1 Score: 836.6 bits (2160), Expect = 1.0e-238
Identity = 405/478 (84.73%), Postives = 428/478 (89.54%), Query Frame = 0


Query: 1   MANQLHGYNSAYGVGP----------ATATPSLPSTYSSSRSLADIVSGRYLVSDSLSSG 60
           MANQLHGY+S YG GP          ATAT  LP+ YSSSRSL+DIVSGRYLVSDSL+SG
Sbjct: 1   MANQLHGYSSVYGAGPATSTATATATATATTPLPAVYSSSRSLSDIVSGRYLVSDSLASG 60

Query: 61  ISIKHSVTDRGASMYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKR 120
           +SIKHS  DRG +MYSTQ EALRLSAADIVPRTSH VSQ+SW G+D A ALDSVVSG++R
Sbjct: 61  LSIKHSFIDRGTTMYSTQNEALRLSAADIVPRTSHSVSQFSWPGSDAATALDSVVSGIQR 120

Query: 121 SSDVLYDQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTR 180
           SSDVLYDQTVLGS NTLGQSEAWYTSNSLAKRPRFESTSNL VYPQRPGEKDCAHYMLTR
Sbjct: 121 SSDVLYDQTVLGSYNTLGQSEAWYTSNSLAKRPRFESTSNLHVYPQRPGEKDCAHYMLTR 180

Query: 181 TCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRC 240
           TCKFGDSCKFDHPIWVP+GGIPDWKEVPQI ++EDLPER GEPDCPYFLKTQRCKFGSRC
Sbjct: 181 TCKFGDSCKFDHPIWVPDGGIPDWKEVPQITSSEDLPERLGEPDCPYFLKTQRCKFGSRC 240

Query: 241 KFNHPKDRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGA 300
           KFNHPKD S+SVGAEKSDVS+LPERPSEPLCAFYVKTG CKF VNCKFHHPKDI +LSG 
Sbjct: 241 KFNHPKDTSESVGAEKSDVSSLPERPSEPLCAFYVKTGNCKFRVNCKFHHPKDIQILSGE 300

Query: 301 ENGNSEQTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCK 360
            NGNSEQTLMEA  EG IGDFKLVKPPVSF PALIHNSKGLPIR GEVDCPFYLKTGSCK
Sbjct: 301 VNGNSEQTLMEANTEGRIGDFKLVKPPVSFSPALIHNSKGLPIRPGEVDCPFYLKTGSCK 360

Query: 361 YGTSCRYNHPDRNAINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSS 420
           YGT+CRYNHPDRNAIN        PAMVSA+NMNIG+ NPSNAIYQA++PRLIQP LGSS
Sbjct: 361 YGTTCRYNHPDRNAINPST-----PAMVSAANMNIGISNPSNAIYQAVDPRLIQPLLGSS 420

Query: 421 SSIYPQRPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 469
           SSIYP+RPGQIECDYYMKTGDCKFGERCKFHHPIDRSAP QA+Q NVKLTLAGLPRRE
Sbjct: 421 SSIYPRRPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPMQASQHNVKLTLAGLPRRE 473

[Close]

BLAST of MS006448 vs. ExPASy Swiss-Prot
Match: Q941Q3 (Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=HUA1 PE=1 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 1.2e-136
Identity = 234/377 (62.07%), Postives = 288/377 (76.39%), Query Frame = 0


Query: 98  AAALDSVVSGVKRSSDVLYDQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQR 157
           A+A++ +  GVKR+S+ LY  T+LG+ NT+GQ+EAWYT++   KRP+ ESTS+LP+YPQR
Sbjct: 115 ASAVEPLPPGVKRTSEALYYPTLLGAHNTIGQTEAWYTTDYFTKRPKLESTSHLPIYPQR 174

Query: 158 PGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPY 217
            GEKDC HYM TRTCKFG+SC+FDHPIWVPEGGIPDWKE P +  NE+ PERPGEPDCPY
Sbjct: 175 AGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAP-VVPNEEYPERPGEPDCPY 234

Query: 218 FLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCK 277
           ++KTQRCK+GS+CKFNHP++ + +V  E  D  +LPERPSEP+C FY+KTGKCKFG++CK
Sbjct: 235 YIKTQRCKYGSKCKFNHPREEA-AVSVETQD--SLPERPSEPMCTFYMKTGKCKFGLSCK 294

Query: 278 FHHPKDILVLSGAEN-GNSEQTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLG 337
           FHHPKDI + S +++ G+S     E              P V+F PAL HNSKGLP+R G
Sbjct: 295 FHHPKDIQLPSSSQDIGSSVGLTSEPDATN--------NPHVTFTPALYHNSKGLPVRSG 354

Query: 338 EVDCPFYLKTGSCKYGTSCRYNHPDRNAINSCNATMVHPAMVSA--SNMNIGLVNPSNAI 397
           EVDCPFYLKTGSCKYG +CRYNHP+R A     A  V+ ++VS+  +N+N+GLV P+ + 
Sbjct: 355 EVDCPFYLKTGSCKYGATCRYNHPERTAFIP-QAAGVNYSLVSSNTANLNLGLVTPATSF 414

Query: 398 YQAINPRLIQPPLGSSSSIYPQRPGQIECDYYMKTGDCKFGERCKFHHPIDR--SAPKQA 457
           YQ     L QP LG  S+ YPQRPGQ ECDYYMKTG+CKFGERCKFHHP DR  +  KQA
Sbjct: 415 YQT----LTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQA 474

Query: 458 AQQ-NVKLTLAGLPRRE 469
            QQ NVKL+LAG PRRE
Sbjct: 475 PQQPNVKLSLAGYPRRE 474

[Close]

BLAST of MS006448 vs. ExPASy Swiss-Prot
Match: Q5ZDJ6 (Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0616400 PE=2 SV=2)

HSP 1 Score: 408.3 bits (1048), Expect = 1.2e-112
Identity = 207/397 (52.14%), Postives = 262/397 (65.99%), Query Frame = 0


Query: 95  TDVAAALDSVVSGVKRSSDVLYDQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVY 154
           +  AA LD+ ++G +RS  VLY Q ++GS +T+ Q EA Y+SN++ KRPR E  S+LP+Y
Sbjct: 45  SSAAADLDARLAGARRSMGVLYHQPIMGSHSTVEQIEALYSSNTMTKRPRLE--SSLPIY 104

Query: 155 PQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPQIAN-NEDLPERPGEP 214
           PQRPGEKDCA YM+TRTCKFG SCKFDHP WVPEGGIP+WKE  Q AN  E  PE+ GEP
Sbjct: 105 PQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKE--QAANVEESYPEQEGEP 164

Query: 215 DCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEK-------SDVSALPERPSEPLCAFYVK 274
           DCP+F+KT +CKFGS+CKFNHPK++ +++ +         +D S LP RPSEPLC+FY K
Sbjct: 165 DCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAK 224

Query: 275 TGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAKIEGGIGDFKLVKPPVSFPPALIH 334
           TGKCKF   CKF+HPKDI + S      S  T+      G   D    K       A   
Sbjct: 225 TGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEF 284

Query: 335 NSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRNAINSCNATMVHPAMVSASNMNIG 394
           NSKGLP+R GEVDCPFY+K GSCK+G++CR+NHPDR  +N     +    + +  +M   
Sbjct: 285 NSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLN-FPLPLGQTILPTPESM--- 344

Query: 395 LVNPSNAIYQAINPRLIQPPLGSSSSIYPQRPGQIECDYYMKTGDCKFGERCKFHHPIDR 454
           L+N S    Q  +      P+G     YPQRPG   CD+YMKTG CKF +RCKFHHPIDR
Sbjct: 345 LLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDR 404

Query: 455 SAPK-----QAAQQNVKLTLAGLPRRE-VYICLCLVK 478
           SAP      + A+++V+LTLAGLPRRE   +C   +K
Sbjct: 405 SAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMK 433

[Close]

BLAST of MS006448 vs. ExPASy Swiss-Prot
Match: Q8L7N8 (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana OX=3702 GN=ZFN3 PE=2 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-44
Identity = 105/290 (36.21%), Postives = 141/290 (48.62%), Query Frame = 0


Query: 207 PERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDVSALPERPSEPLCAFYVK 266
           PER GEPDC Y+++T  C+FGS C+FNHP DR   +   +      PER  +P C FY+K
Sbjct: 40  PERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIK-GEYPERIGQPECEFYLK 99

Query: 267 TGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAKIEGGIGDFKLVKPPVSFPPALIH 326
           TG CKFGV CKFHHP++                 +A I+G +                  
Sbjct: 100 TGTCKFGVTCKFHHPRN-----------------KAGIDGSVS----------------V 159

Query: 327 NSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRNAIN---SCNATMVHPAMVSASNM 386
           N    P+R  E DC ++L+ G CK+G +C++NHP   + N   S   + V+ A+ S +  
Sbjct: 160 NVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQ 219

Query: 387 NIGLVNPSNAIYQAINPRLIQP----------------------PLG----SSSSIYPQR 446
                + S   + A  PRL  P                      PLG       +++P+R
Sbjct: 220 --PSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPER 279

Query: 447 PGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRR 468
           PGQ EC +YMKTGDCKFG  CKFHHP DR  P      +  L+  GLP R
Sbjct: 280 PGQPECQFYMKTGDCKFGTVCKFHHPRDRQTP----PPDCVLSSVGLPLR 289

[Close]

BLAST of MS006448 vs. ExPASy Swiss-Prot
Match: Q5JLB5 (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0917400 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 1.8e-44
Identity = 109/322 (33.85%), Postives = 158/322 (49.07%), Query Frame = 0


Query: 154 YPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEP 213
           YP+R GE DC +Y+ T  C+FG SC+F+HP    +  +     +       + PER G+P
Sbjct: 77  YPERSGEPDCTYYLRTGLCRFGMSCRFNHP---QDRNL----AIASARMKGEYPERMGQP 136

Query: 214 DCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFG 273
           +C Y+LKT  CKFG  CKF+HP++++   G  + +    P RPSE  CA+Y+KTG+CK+G
Sbjct: 137 ECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCKYG 196

Query: 274 VNCKFHHPKDILVLSGAENGNSEQTLMEAKIEGGIGDFKLVK---PPVSFPPA----LIH 333
             CKFHHP+    ++ +       ++  +   G      +     P  SF P+       
Sbjct: 197 NTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFPRGSFIPSPRWQNPS 256

Query: 334 NSKGLPIRLGEVDCPFYLK-TGSCKYGTSCRYNHPDRNAINSCNATMVHPAMVSASNMNI 393
           N   + +  G V  P +   TG     +S       R        T      V AS  N 
Sbjct: 257 NYAPMIVPQGLVQVPSWNSYTGQMMPVSSSE----SRLQSPGAQQTYGTSQQVDASAGNQ 316

Query: 394 GLVNPSNAIYQAINPRLIQPPLGSSSSIYPQRPGQIECDYYMKTGDCKFGERCKFHHPID 453
           G+++P  +    +    +Q       +++P+RP Q EC YYMKTGDCKFG  CKFHHP  
Sbjct: 317 GMLSPYRSSSYPVPQYALQ-----RENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRV 376

Query: 454 RSAPKQAAQQNVKLTLAGLPRR 468
           RS P      +  L+  GLP R
Sbjct: 377 RSMP----TPDCVLSPVGLPLR 378

[Close]

BLAST of MS006448 vs. ExPASy Swiss-Prot
Match: Q9SQU4 (Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=At3g06410 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 1.8e-44
Identity = 111/340 (32.65%), Postives = 150/340 (44.12%), Query Frame = 0


Query: 204 EDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDVSALPERPSEPLCAF 263
           E  PERP EPDC Y+L+T  C +GSRC+FNHP+DR   +G  + +  ALPER   P+C  
Sbjct: 49  ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQH 108

Query: 264 YVKTGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAKIEGGIGDFKLVKPPVSFPPA 323
           +++TG CKFG +CK+HHP+                      +GG G       PVS    
Sbjct: 109 FMRTGTCKFGASCKYHHPR----------------------QGGGGG---SVAPVSL--- 168

Query: 324 LIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRNAIN-------------SCNA 383
              +  G P+R GE +C +YL+TG CK+G +CR+NHP   A+                  
Sbjct: 169 ---SYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQL 228

Query: 384 TMVHPAMVS---ASNMNIGLV--------------------------------NPSNAIY 443
             ++P + S    S+   GLV                                NP  A  
Sbjct: 229 QTIYPTLQSQSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASL 288

Query: 444 QAINPRLIQPPLGSS----------------------------SSIYPQRPGQIECDYYM 468
            A+     QP +GSS                            S  +PQRP Q EC Y+M
Sbjct: 289 SAMPSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFM 348

[Close]

BLAST of MS006448 vs. ExPASy TrEMBL
Match: A0A6J1D3R5 (zinc finger CCCH domain-containing protein 37 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016724 PE=4 SV=1)

HSP 1 Score: 856.7 bits (2212), Expect = 4.7e-245
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 64  MYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLYDQTVLGS 123
           MYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLYDQTVLGS
Sbjct: 1   MYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLYDQTVLGS 60

Query: 124 CNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP 183
           CNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP
Sbjct: 61  CNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP 120

Query: 184 IWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVG 243
           IWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVG
Sbjct: 121 IWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVG 180

Query: 244 AEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAK 303
           AEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAK
Sbjct: 181 AEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAK 240

Query: 304 IEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRN 363
           IEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRN
Sbjct: 241 IEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRN 300

Query: 364 AINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQRPGQIEC 423
           AINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQRPGQIEC
Sbjct: 301 AINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQRPGQIEC 360

Query: 424 DYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 469
           DYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE
Sbjct: 361 DYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 405

[Close]

BLAST of MS006448 vs. ExPASy TrEMBL
Match: A0A0A0K469 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G252650 PE=4 SV=1)

HSP 1 Score: 852.4 bits (2201), Expect = 8.9e-244
Identity = 414/484 (85.54%), Postives = 435/484 (89.88%), Query Frame = 0


Query: 1   MANQLHGYNSAYGV----GPATATPSLPSTYSSSRSLADIVSGRYLVSDSLSSGISIKHS 60
           MANQLH YNSAYG       ATA PSLP+TYS+SRSL+DIVSGRYL+ DSLSSGISIKHS
Sbjct: 1   MANQLHSYNSAYGAVSASATATAVPSLPTTYSTSRSLSDIVSGRYLLPDSLSSGISIKHS 60

Query: 61  VTDRGASMYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLY 120
           VTDRG SMYSTQKE   LS+ADIVPRTSHLVSQ+SW G+ VAAALDSVVSG+KRSSDVLY
Sbjct: 61  VTDRGTSMYSTQKEGPMLSSADIVPRTSHLVSQFSWPGSHVAAALDSVVSGIKRSSDVLY 120

Query: 121 DQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180
           DQTVLGS NTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD
Sbjct: 121 DQTVLGSYNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180

Query: 181 SCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPK 240
           SCKFDHPIWVPEGGIPDWKEVPQIAN+EDLPER G+PDCPYFLKTQRCKFGSRCKFNHPK
Sbjct: 181 SCKFDHPIWVPEGGIPDWKEVPQIANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPK 240

Query: 241 DRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSE 300
           DRSDSVGAEKSD S+LPERPSEPLCAFYVKTG CKFG+NCKFHHPKDI +LSG E GNSE
Sbjct: 241 DRSDSVGAEKSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSE 300

Query: 301 QTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCR 360
           QTLM  K E   GDFKLVKPP+S  PA++HNSKGLPIR GEVDCPFYLKTGSCKYGT+CR
Sbjct: 301 QTLM-VKTEERAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCR 360

Query: 361 YNHPDRNAINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQ 420
           YNHPDRNAIN     MVHPAMVS +NMN G VNPSNAIYQA++PRLIQP LGS SSIYPQ
Sbjct: 361 YNHPDRNAINPSTPAMVHPAMVSTANMNTGFVNPSNAIYQAVDPRLIQPLLGSGSSIYPQ 420

Query: 421 RPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRREVYICLCLV 480
           RPGQIECD+YMKTGDCKFGERCKFHHPIDRSAPKQ A  NVKLTLAGLPRREVYI    V
Sbjct: 421 RPGQIECDFYMKTGDCKFGERCKFHHPIDRSAPKQGALHNVKLTLAGLPRREVYIS-DFV 480

[Close]

BLAST of MS006448 vs. ExPASy TrEMBL
Match: A0A6J1GM41 (zinc finger CCCH domain-containing protein 37 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455230 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 5.1e-239
Identity = 405/478 (84.73%), Postives = 428/478 (89.54%), Query Frame = 0


Query: 1   MANQLHGYNSAYGVGP----------ATATPSLPSTYSSSRSLADIVSGRYLVSDSLSSG 60
           MANQLHGY+S YG GP          ATAT  LP+ YSSSRSL+DIVSGRYLVSDSL+SG
Sbjct: 1   MANQLHGYSSVYGAGPATSTATATATATATTPLPAVYSSSRSLSDIVSGRYLVSDSLASG 60

Query: 61  ISIKHSVTDRGASMYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKR 120
           +SIKHS  DRG +MYSTQ EALRLSAADIVPRTSH VSQ+SW G+D A ALDSVVSG++R
Sbjct: 61  LSIKHSFIDRGTTMYSTQNEALRLSAADIVPRTSHSVSQFSWPGSDAATALDSVVSGIQR 120

Query: 121 SSDVLYDQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTR 180
           SSDVLYDQTVLGS NTLGQSEAWYTSNSLAKRPRFESTSNL VYPQRPGEKDCAHYMLTR
Sbjct: 121 SSDVLYDQTVLGSYNTLGQSEAWYTSNSLAKRPRFESTSNLHVYPQRPGEKDCAHYMLTR 180

Query: 181 TCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRC 240
           TCKFGDSCKFDHPIWVP+GGIPDWKEVPQI ++EDLPER GEPDCPYFLKTQRCKFGSRC
Sbjct: 181 TCKFGDSCKFDHPIWVPDGGIPDWKEVPQITSSEDLPERLGEPDCPYFLKTQRCKFGSRC 240

Query: 241 KFNHPKDRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGA 300
           KFNHPKD S+SVGAEKSDVS+LPERPSEPLCAFYVKTG CKF VNCKFHHPKDI +LSG 
Sbjct: 241 KFNHPKDTSESVGAEKSDVSSLPERPSEPLCAFYVKTGNCKFRVNCKFHHPKDIQILSGE 300

Query: 301 ENGNSEQTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCK 360
            NGNSEQTLMEA  EG IGDFKLVKPPVSF PALIHNSKGLPIR GEVDCPFYLKTGSCK
Sbjct: 301 VNGNSEQTLMEANTEGRIGDFKLVKPPVSFSPALIHNSKGLPIRPGEVDCPFYLKTGSCK 360

Query: 361 YGTSCRYNHPDRNAINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSS 420
           YGT+CRYNHPDRNAIN        PAMVSA+NMNIG+ NPSNAIYQA++PRLIQP LGSS
Sbjct: 361 YGTTCRYNHPDRNAINPST-----PAMVSAANMNIGISNPSNAIYQAVDPRLIQPLLGSS 420

Query: 421 SSIYPQRPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 469
           SSIYP+RPGQIECDYYMKTGDCKFGERCKFHHPIDRSAP QA+Q NVKLTLAGLPRRE
Sbjct: 421 SSIYPRRPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPMQASQHNVKLTLAGLPRRE 473

[Close]

BLAST of MS006448 vs. ExPASy TrEMBL
Match: A0A1S3BGI6 (zinc finger CCCH domain-containing protein 37 OS=Cucumis melo OX=3656 GN=LOC103489619 PE=4 SV=1)

HSP 1 Score: 834.7 bits (2155), Expect = 1.9e-238
Identity = 403/472 (85.38%), Postives = 423/472 (89.62%), Query Frame = 0


Query: 1   MANQLHGYNSAYGV----GPATATPSLPSTYSSSRSLADIVSGRYLVSDSLSSGISIKHS 60
           MANQLH YNS YG       ATA PSLP+TYSSSRSL+DIVSGRYL+ DSLSSG+SIK S
Sbjct: 1   MANQLHSYNSVYGAASASASATAVPSLPTTYSSSRSLSDIVSGRYLLPDSLSSGVSIKQS 60

Query: 61  VTDRGASMYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLY 120
           VTDRG SMYSTQKE   LS+ADIVPRTSHLV+Q+SW G+ VAAALDSV+SG+KRSSDVLY
Sbjct: 61  VTDRGTSMYSTQKEG-PLSSADIVPRTSHLVTQFSWPGSHVAAALDSVISGIKRSSDVLY 120

Query: 121 DQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180
           DQTVLGS NTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD
Sbjct: 121 DQTVLGSYNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180

Query: 181 SCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPK 240
           SCKFDHPIWVPEGGIPDWKEVPQIAN+EDLPER G+PDCPYFLKTQRCKFGSRCKFNHPK
Sbjct: 181 SCKFDHPIWVPEGGIPDWKEVPQIANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPK 240

Query: 241 DRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSE 300
           DRSDSVGAEKSD S LPERPSEPLCAFY+KTG CKFG+NCKFHHPKDI +LSG ENGNSE
Sbjct: 241 DRSDSVGAEKSDASKLPERPSEPLCAFYIKTGNCKFGINCKFHHPKDIQILSGEENGNSE 300

Query: 301 QTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCR 360
           QTLM AK E   GD KL  PPVS  PAL+HNSKGLPIR GEVDCPFYLKTGSCKYGT+CR
Sbjct: 301 QTLM-AKTEERAGDVKLKPPPVSLSPALMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCR 360

Query: 361 YNHPDRNAINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQ 420
           YNHPDRNAIN     MVHPAMVS +NMN G VNPSNAIYQA++PRLIQP LGS SSIYPQ
Sbjct: 361 YNHPDRNAINPSTPAMVHPAMVSTANMNTGFVNPSNAIYQAVDPRLIQPLLGSGSSIYPQ 420

Query: 421 RPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 469
           RPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQ A  NVKLTLAGLPRRE
Sbjct: 421 RPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQGALHNVKLTLAGLPRRE 470

[Close]

BLAST of MS006448 vs. ExPASy TrEMBL
Match: A0A5A7VAA0 (Zinc finger CCCH domain-containing protein 37 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold357G00470 PE=4 SV=1)

HSP 1 Score: 832.4 bits (2149), Expect = 9.5e-238
Identity = 403/472 (85.38%), Postives = 424/472 (89.83%), Query Frame = 0


Query: 1   MANQLHGYNSAYGV----GPATATPSLPSTYSSSRSLADIVSGRYLVSDSLSSGISIKHS 60
           MANQLH YNS YG       ATA PSLP+TYSSSRSL+DIVSGRYL+ DSLSSG+SIK S
Sbjct: 1   MANQLHSYNSVYGAASASASATAVPSLPTTYSSSRSLSDIVSGRYLLPDSLSSGVSIKQS 60

Query: 61  VTDRGASMYSTQKEALRLSAADIVPRTSHLVSQYSWSGTDVAAALDSVVSGVKRSSDVLY 120
           VTDRG SMYSTQKE   LS+ADIVPRTSHLV+Q+SW G+ VAAALDSV+SG+KRSSDVLY
Sbjct: 61  VTDRGTSMYSTQKEG-PLSSADIVPRTSHLVTQFSWPGSHVAAALDSVISGIKRSSDVLY 120

Query: 121 DQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180
           DQTVLGS NTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD
Sbjct: 121 DQTVLGSYNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGD 180

Query: 181 SCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPK 240
           SCKFDHPIWVPEGGIPDWKEVPQIAN+EDLPER G+PDCPYFLKTQRCKFGSRCKFNHPK
Sbjct: 181 SCKFDHPIWVPEGGIPDWKEVPQIANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPK 240

Query: 241 DRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCKFHHPKDILVLSGAENGNSE 300
           DRSDSVGAEKSD S LPERPSEPLCAFY+KTG CKFG+NCKFHHPKDI +LSG ENGNSE
Sbjct: 241 DRSDSVGAEKSDASKLPERPSEPLCAFYIKTGNCKFGINCKFHHPKDIQILSGEENGNSE 300

Query: 301 QTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCR 360
           QTLM AK E   GD KL KPPVS  PAL+HNSKGLPIR GEVDCPFYLKTGSCKYGT+CR
Sbjct: 301 QTLM-AKTEERAGDVKL-KPPVSLSPALMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCR 360

Query: 361 YNHPDRNAINSCNATMVHPAMVSASNMNIGLVNPSNAIYQAINPRLIQPPLGSSSSIYPQ 420
           YNHPDRNAIN     MVHPAMVS +NMN G VNPSNAIYQA++PRLIQP LGS SSIYPQ
Sbjct: 361 YNHPDRNAINPSTPAMVHPAMVSTANMNTGFVNPSNAIYQAVDPRLIQPLLGSGSSIYPQ 420

Query: 421 RPGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRRE 469
           RPGQIECDYYMKTGDCKFGERCKFHHP+DRSAPKQ A  NVKLTLAGLPRRE
Sbjct: 421 RPGQIECDYYMKTGDCKFGERCKFHHPVDRSAPKQGALHNVKLTLAGLPRRE 469

[Close]

BLAST of MS006448 vs. TAIR 10
Match: AT3G12680.1 (floral homeotic protein (HUA1) )

HSP 1 Score: 488.0 bits (1255), Expect = 8.5e-138
Identity = 234/377 (62.07%), Postives = 288/377 (76.39%), Query Frame = 0


Query: 98  AAALDSVVSGVKRSSDVLYDQTVLGSCNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQR 157
           A+A++ +  GVKR+S+ LY  T+LG+ NT+GQ+EAWYT++   KRP+ ESTS+LP+YPQR
Sbjct: 115 ASAVEPLPPGVKRTSEALYYPTLLGAHNTIGQTEAWYTTDYFTKRPKLESTSHLPIYPQR 174

Query: 158 PGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANNEDLPERPGEPDCPY 217
            GEKDC HYM TRTCKFG+SC+FDHPIWVPEGGIPDWKE P +  NE+ PERPGEPDCPY
Sbjct: 175 AGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAP-VVPNEEYPERPGEPDCPY 234

Query: 218 FLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDVSALPERPSEPLCAFYVKTGKCKFGVNCK 277
           ++KTQRCK+GS+CKFNHP++ + +V  E  D  +LPERPSEP+C FY+KTGKCKFG++CK
Sbjct: 235 YIKTQRCKYGSKCKFNHPREEA-AVSVETQD--SLPERPSEPMCTFYMKTGKCKFGLSCK 294

Query: 278 FHHPKDILVLSGAEN-GNSEQTLMEAKIEGGIGDFKLVKPPVSFPPALIHNSKGLPIRLG 337
           FHHPKDI + S +++ G+S     E              P V+F PAL HNSKGLP+R G
Sbjct: 295 FHHPKDIQLPSSSQDIGSSVGLTSEPDATN--------NPHVTFTPALYHNSKGLPVRSG 354

Query: 338 EVDCPFYLKTGSCKYGTSCRYNHPDRNAINSCNATMVHPAMVSA--SNMNIGLVNPSNAI 397
           EVDCPFYLKTGSCKYG +CRYNHP+R A     A  V+ ++VS+  +N+N+GLV P+ + 
Sbjct: 355 EVDCPFYLKTGSCKYGATCRYNHPERTAFIP-QAAGVNYSLVSSNTANLNLGLVTPATSF 414

Query: 398 YQAINPRLIQPPLGSSSSIYPQRPGQIECDYYMKTGDCKFGERCKFHHPIDR--SAPKQA 457
           YQ     L QP LG  S+ YPQRPGQ ECDYYMKTG+CKFGERCKFHHP DR  +  KQA
Sbjct: 415 YQT----LTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQA 474

Query: 458 AQQ-NVKLTLAGLPRRE 469
            QQ NVKL+LAG PRRE
Sbjct: 475 PQQPNVKLSLAGYPRRE 474

[Close]

BLAST of MS006448 vs. TAIR 10
Match: AT5G16540.3 (zinc finger nuclease 3 )

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-45
Identity = 105/290 (36.21%), Postives = 141/290 (48.62%), Query Frame = 0


Query: 207 PERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDVSALPERPSEPLCAFYVK 266
           PER GEPDC Y+++T  C+FGS C+FNHP DR   +   +      PER  +P C FY+K
Sbjct: 19  PERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIK-GEYPERIGQPECEFYLK 78

Query: 267 TGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAKIEGGIGDFKLVKPPVSFPPALIH 326
           TG CKFGV CKFHHP++                 +A I+G +                  
Sbjct: 79  TGTCKFGVTCKFHHPRN-----------------KAGIDGSVS----------------V 138

Query: 327 NSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRNAIN---SCNATMVHPAMVSASNM 386
           N    P+R  E DC ++L+ G CK+G +C++NHP   + N   S   + V+ A+ S +  
Sbjct: 139 NVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQ 198

Query: 387 NIGLVNPSNAIYQAINPRLIQP----------------------PLG----SSSSIYPQR 446
                + S   + A  PRL  P                      PLG       +++P+R
Sbjct: 199 --PSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPER 258

Query: 447 PGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRR 468
           PGQ EC +YMKTGDCKFG  CKFHHP DR  P      +  L+  GLP R
Sbjct: 259 PGQPECQFYMKTGDCKFGTVCKFHHPRDRQTP----PPDCVLSSVGLPLR 268

[Close]

BLAST of MS006448 vs. TAIR 10
Match: AT5G16540.1 (zinc finger nuclease 3 )

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-45
Identity = 105/290 (36.21%), Postives = 141/290 (48.62%), Query Frame = 0


Query: 207 PERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDVSALPERPSEPLCAFYVK 266
           PER GEPDC Y+++T  C+FGS C+FNHP DR   +   +      PER  +P C FY+K
Sbjct: 40  PERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIK-GEYPERIGQPECEFYLK 99

Query: 267 TGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAKIEGGIGDFKLVKPPVSFPPALIH 326
           TG CKFGV CKFHHP++                 +A I+G +                  
Sbjct: 100 TGTCKFGVTCKFHHPRN-----------------KAGIDGSVS----------------V 159

Query: 327 NSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRNAIN---SCNATMVHPAMVSASNM 386
           N    P+R  E DC ++L+ G CK+G +C++NHP   + N   S   + V+ A+ S +  
Sbjct: 160 NVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQ 219

Query: 387 NIGLVNPSNAIYQAINPRLIQP----------------------PLG----SSSSIYPQR 446
                + S   + A  PRL  P                      PLG       +++P+R
Sbjct: 220 --PSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPER 279

Query: 447 PGQIECDYYMKTGDCKFGERCKFHHPIDRSAPKQAAQQNVKLTLAGLPRR 468
           PGQ EC +YMKTGDCKFG  CKFHHP DR  P      +  L+  GLP R
Sbjct: 280 PGQPECQFYMKTGDCKFGTVCKFHHPRDRQTP----PPDCVLSSVGLPLR 289

[Close]

BLAST of MS006448 vs. TAIR 10
Match: AT3G06410.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 181.8 bits (460), Expect = 1.3e-45
Identity = 111/340 (32.65%), Postives = 150/340 (44.12%), Query Frame = 0


Query: 204 EDLPERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDVSALPERPSEPLCAF 263
           E  PERP EPDC Y+L+T  C +GSRC+FNHP+DR   +G  + +  ALPER   P+C  
Sbjct: 49  ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQH 108

Query: 264 YVKTGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAKIEGGIGDFKLVKPPVSFPPA 323
           +++TG CKFG +CK+HHP+                      +GG G       PVS    
Sbjct: 109 FMRTGTCKFGASCKYHHPR----------------------QGGGGG---SVAPVSL--- 168

Query: 324 LIHNSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRNAIN-------------SCNA 383
              +  G P+R GE +C +YL+TG CK+G +CR+NHP   A+                  
Sbjct: 169 ---SYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQL 228

Query: 384 TMVHPAMVS---ASNMNIGLV--------------------------------NPSNAIY 443
             ++P + S    S+   GLV                                NP  A  
Sbjct: 229 QTIYPTLQSQSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASL 288

Query: 444 QAINPRLIQPPLGSS----------------------------SSIYPQRPGQIECDYYM 468
            A+     QP +GSS                            S  +PQRP Q EC Y+M
Sbjct: 289 SAMPSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFM 348

[Close]

BLAST of MS006448 vs. TAIR 10
Match: AT5G16540.2 (zinc finger nuclease 3 )

HSP 1 Score: 180.3 bits (456), Expect = 3.8e-45
Identity = 100/272 (36.76%), Postives = 134/272 (49.26%), Query Frame = 0


Query: 207 PERPGEPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDVSALPERPSEPLCAFYVK 266
           PER GEPDC Y+++T  C+FGS C+FNHP DR   +   +      PER  +P C FY+K
Sbjct: 40  PERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIK-GEYPERIGQPECEFYLK 99

Query: 267 TGKCKFGVNCKFHHPKDILVLSGAENGNSEQTLMEAKIEGGIGDFKLVKPPVSFPPALIH 326
           TG CKFGV CKFHHP++                 +A I+G +                  
Sbjct: 100 TGTCKFGVTCKFHHPRN-----------------KAGIDGSVS----------------V 159

Query: 327 NSKGLPIRLGEVDCPFYLKTGSCKYGTSCRYNHPDRNAIN---SCNATMVHPAMVSASNM 386
           N    P+R  E DC ++L+ G CK+G +C++NHP   + N   S   + V+ A+ S +  
Sbjct: 160 NVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQ 219

Query: 387 NIGLVNPSNAIYQAINPRLIQP----------------------PLG----SSSSIYPQR 446
                + S   + A  PRL  P                      PLG       +++P+R
Sbjct: 220 --PSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPER 275

Query: 447 PGQIECDYYMKTGDCKFGERCKFHHPIDRSAP 450
           PGQ EC +YMKTGDCKFG  CKFHHP DR  P
Sbjct: 280 PGQPECQFYMKTGDCKFGTVCKFHHPRDRQTP 275

The following BLAST results are available for this feature:

BLAST of MS006448 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147901.1	9.8e-245	100.00	zinc finger CCCH domain-containing protein 37 isoform X1 [Momordica charantia]	[more]
XP_038888751.1	1.1e-243	87.92	zinc finger CCCH domain-containing protein 37 isoform X2 [Benincasa hispida]	[more]
XP_004148293.1	2.9e-241	86.02	zinc finger CCCH domain-containing protein 37 isoform X1 [Cucumis sativus] >KAE8...	[more]
XP_031744499.1	2.9e-241	86.02	zinc finger CCCH domain-containing protein 37 isoform X3 [Cucumis sativus]	[more]
XP_022952579.1	1.0e-238	84.73	zinc finger CCCH domain-containing protein 37 isoform X1 [Cucurbita moschata]	[more]

BLAST of MS006448 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q941Q3	1.2e-136	62.07	Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q5ZDJ6	1.2e-112	52.14	Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp. japonica OX=...	[more]
Q8L7N8	1.4e-44	36.21	Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q5JLB5	1.8e-44	33.85	Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SQU4	1.8e-44	32.65	Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of MS006448 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3R5	4.7e-245	100.00	zinc finger CCCH domain-containing protein 37 isoform X1 OS=Momordica charantia ...	[more]
A0A0A0K469	8.9e-244	85.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G252650 PE=4 SV=1	[more]
A0A6J1GM41	5.1e-239	84.73	zinc finger CCCH domain-containing protein 37 isoform X1 OS=Cucurbita moschata O...	[more]
A0A1S3BGI6	1.9e-238	85.38	zinc finger CCCH domain-containing protein 37 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7VAA0	9.5e-238	85.38	Zinc finger CCCH domain-containing protein 37 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of MS006448 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12680.1	8.5e-138	62.07	floral homeotic protein (HUA1)	[more]
AT5G16540.3	1.0e-45	36.21	zinc finger nuclease 3	[more]
AT5G16540.1	1.0e-45	36.21	zinc finger nuclease 3	[more]
AT3G06410.1	1.3e-45	32.65	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G16540.2	3.8e-45	36.76	zinc finger nuclease 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 255..282 e-value: 1.1E-5 score: 34.9 coord: 209..236 e-value: 7.4E-6 score: 35.5 coord: 334..361 e-value: 1.8E-6 score: 37.5 coord: 157..184 e-value: 0.0011 score: 28.2 coord: 417..444 e-value: 2.9E-6 score: 36.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 258..282 e-value: 4.8E-9 score: 35.9 coord: 211..236 e-value: 5.5E-9 score: 35.7 coord: 421..443 e-value: 1.6E-10 score: 40.6 coord: 337..360 e-value: 2.2E-9 score: 37.0 coord: 159..183 e-value: 1.4E-8 score: 34.4
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 209..237 score: 15.478496
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 417..445 score: 15.046597
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 255..283 score: 15.375216
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 334..362 score: 14.962095
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 157..185 score: 13.506785
None	No IPR available	GENE3D	4.10.1000.10		coord: 156..250 e-value: 6.2E-15 score: 56.8
None	No IPR available	GENE3D	2.30.30.1190		coord: 373..451 e-value: 9.2E-7 score: 30.9
None	No IPR available	GENE3D	4.10.1000.10		coord: 251..372 e-value: 2.0E-16 score: 61.6
None	No IPR available	PANTHER	PTHR12547:SF63	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 37	coord: 63..469
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 63..469
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 420..445
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 258..283
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 214..238
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 338..361
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 159..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS006448.1	MS006448.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding