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MS006254 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTGCAGAAAGTGGTGATGAAACTTGACTTGCACGATGACAGAGAAAAGAAGAAGGCCCTCAAGGCAGTTTCTGGACTTACAGGTAATCCAGAACTCCCGGGACCTGATACGGAAAAATGATTGAATTTACTGTGACCATCAACTTAAATTTTTGAATGTGACCTGCAGGAGTTGAATCCGTCGCGATGGAGATGAAGGACAAGAAGCTGACAGTAATTGGGAGCGTCGACCCGGTTAATGTGGCTGCTAAGATACGGAAGCATTGGCCCGGCGCCGAGATACTCAGCTTCGGGCCGGCGAAGGAGGAGAAGAAGCCGGAGGCAAAGAAAGAACCGGAGAAGCCAAAGATCACAACTGAGCAGCAGCTACAGCAGATACTTATGCAGATGGGGCATCCTCATTGGCATCCTGCTAATTACCATGTCTTGAGTGTAGAAGAGAATCCCAATTCTTGTGTCATATGT CTGCAGAAAGTGGTGATGAAACTTGACTTGCACGATGACAGAGAAAAGAAGAAGGCCCTCAAGGCAGTTTCTGGACTTACAGGAGTTGAATCCGTCGCGATGGAGATGAAGGACAAGAAGCTGACAGTAATTGGGAGCGTCGACCCGGTTAATGTGGCTGCTAAGATACGGAAGCATTGGCCCGGCGCCGAGATACTCAGCTTCGGGCCGGCGAAGGAGGAGAAGAAGCCGGAGGCAAAGAAAGAACCGGAGAAGCCAAAGATCACAACTGAGCAGCAGCTACAGCAGATACTTATGCAGATGGGGCATCCTCATTGGCATCCTGCTAATTACCATGTCTTGAGTGTAGAAGAGAATCCCAATTCTTGTGTCATATGT CTGCAGAAAGTGGTGATGAAACTTGACTTGCACGATGACAGAGAAAAGAAGAAGGCCCTCAAGGCAGTTTCTGGACTTACAGGAGTTGAATCCGTCGCGATGGAGATGAAGGACAAGAAGCTGACAGTAATTGGGAGCGTCGACCCGGTTAATGTGGCTGCTAAGATACGGAAGCATTGGCCCGGCGCCGAGATACTCAGCTTCGGGCCGGCGAAGGAGGAGAAGAAGCCGGAGGCAAAGAAAGAACCGGAGAAGCCAAAGATCACAACTGAGCAGCAGCTACAGCAGATACTTATGCAGATGGGGCATCCTCATTGGCATCCTGCTAATTACCATGTCTTGAGTGTAGAAGAGAATCCCAATTCTTGTGTCATATGT LQKVVMKLDLHDDREKKKALKAVSGLTGVESVAMEMKDKKLTVIGSVDPVNVAAKIRKHWPGAEILSFGPAKEEKKPEAKKEPEKPKITTEQQLQQILMQMGHPHWHPANYHVLSVEENPNSCVIC Homology
BLAST of MS006254 vs. NCBI nr
Match: XP_022157166.1 (heavy metal-associated isoprenylated plant protein 39-like [Momordica charantia]) HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of MS006254 vs. NCBI nr
Match: XP_004143886.1 (heavy metal-associated isoprenylated plant protein 39 isoform X1 [Cucumis sativus] >KGN50060.1 hypothetical protein Csa_000088 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30 Identity = 75/127 (59.06%), Postives = 93/127 (73.23%), Query Frame = 0
BLAST of MS006254 vs. NCBI nr
Match: XP_022929001.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata]) HSP 1 Score: 141.0 bits (354), Expect = 7.2e-30 Identity = 79/126 (62.70%), Postives = 94/126 (74.60%), Query Frame = 0
BLAST of MS006254 vs. NCBI nr
Match: KAG6579531.1 (Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 140.6 bits (353), Expect = 9.4e-30 Identity = 79/126 (62.70%), Postives = 94/126 (74.60%), Query Frame = 0
BLAST of MS006254 vs. NCBI nr
Match: XP_023551297.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 140.6 bits (353), Expect = 9.4e-30 Identity = 79/126 (62.70%), Postives = 93/126 (73.81%), Query Frame = 0
BLAST of MS006254 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.1e-24 Identity = 73/178 (41.01%), Postives = 96/178 (53.93%), Query Frame = 0
BLAST of MS006254 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09 Identity = 48/126 (38.10%), Postives = 71/126 (56.35%), Query Frame = 0
BLAST of MS006254 vs. ExPASy Swiss-Prot
Match: Q9LTE2 (Heavy metal-associated isoprenylated plant protein 13 OS=Arabidopsis thaliana OX=3702 GN=HIPP13 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06 Identity = 35/84 (41.67%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of MS006254 vs. ExPASy Swiss-Prot
Match: Q9LTE1 (Heavy metal-associated isoprenylated plant protein 14 OS=Arabidopsis thaliana OX=3702 GN=HIPP14 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.0e-06 Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of MS006254 vs. ExPASy Swiss-Prot
Match: Q9CAK6 (Heavy metal-associated isoprenylated plant protein 15 OS=Arabidopsis thaliana OX=3702 GN=HIPP15 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-06 Identity = 30/85 (35.29%), Postives = 51/85 (60.00%), Query Frame = 0
BLAST of MS006254 vs. ExPASy TrEMBL
Match: A0A6J1DX64 (heavy metal-associated isoprenylated plant protein 39-like OS=Momordica charantia OX=3673 GN=LOC111023948 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 5.3e-63 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of MS006254 vs. ExPASy TrEMBL
Match: A0A0A0KK61 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152250 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 7.0e-31 Identity = 75/127 (59.06%), Postives = 93/127 (73.23%), Query Frame = 0
BLAST of MS006254 vs. ExPASy TrEMBL
Match: A0A6J1ELV6 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111435732 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.5e-30 Identity = 79/126 (62.70%), Postives = 94/126 (74.60%), Query Frame = 0
BLAST of MS006254 vs. ExPASy TrEMBL
Match: A0A5A7THG6 (Heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002220 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.7e-29 Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 0
BLAST of MS006254 vs. ExPASy TrEMBL
Match: A0A1S3ATS2 (heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=3656 GN=LOC103482785 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.7e-29 Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 0
BLAST of MS006254 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25 Identity = 73/178 (41.01%), Postives = 96/178 (53.93%), Query Frame = 0
BLAST of MS006254 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25 Identity = 73/178 (41.01%), Postives = 96/178 (53.93%), Query Frame = 0
BLAST of MS006254 vs. TAIR 10
Match: AT5G23760.1 (Copper transport protein family ) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13 Identity = 44/96 (45.83%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of MS006254 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family ) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10 Identity = 48/126 (38.10%), Postives = 71/126 (56.35%), Query Frame = 0
BLAST of MS006254 vs. TAIR 10
Match: AT5G52750.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 8.2e-08 Identity = 35/84 (41.67%), Postives = 50/84 (59.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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