![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS006252 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTGCAGGCATTGCCTCCATGGCAGCGGACACCAAAGAGAATAAAATAATAGTGATTGGAAGCGCAGACCCAGTTGCCATAGTTGGCAAAGTGAGAAAGGTTTGGCCCTCAGCTAAACTTTTCAGCGTCGGGCCAGAGAAAGAAGAGCCTAACAAAGACGAGTCGAAACCCGAAACTCAATTCCAGCCTATTGATTGGGCTAAGGCTTGGACACCCTTCCAT CTTGCAGGCATTGCCTCCATGGCAGCGGACACCAAAGAGAATAAAATAATAGTGATTGGAAGCGCAGACCCAGTTGCCATAGTTGGCAAAGTGAGAAAGGTTTGGCCCTCAGCTAAACTTTTCAGCGTCGGGCCAGAGAAAGAAGAGCCTAACAAAGACGAGTCGAAACCCGAAACTCAATTCCAGCCTATTGATTGGGCTAAGGCTTGGACACCCTTCCAT CTTGCAGGCATTGCCTCCATGGCAGCGGACACCAAAGAGAATAAAATAATAGTGATTGGAAGCGCAGACCCAGTTGCCATAGTTGGCAAAGTGAGAAAGGTTTGGCCCTCAGCTAAACTTTTCAGCGTCGGGCCAGAGAAAGAAGAGCCTAACAAAGACGAGTCGAAACCCGAAACTCAATTCCAGCCTATTGATTGGGCTAAGGCTTGGACACCCTTCCAT LAGIASMAADTKENKIIVIGSADPVAIVGKVRKVWPSAKLFSVGPEKEEPNKDESKPETQFQPIDWAKAWTPFH Homology
BLAST of MS006252 vs. NCBI nr
Match: XP_023542144.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 101.7 bits (252), Expect = 2.8e-18 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of MS006252 vs. NCBI nr
Match: KAG7016848.1 (Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 98.6 bits (244), Expect = 2.4e-17 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of MS006252 vs. NCBI nr
Match: KAG6579362.1 (Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 98.6 bits (244), Expect = 2.4e-17 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of MS006252 vs. NCBI nr
Match: XP_023551446.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 97.4 bits (241), Expect = 5.3e-17 Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of MS006252 vs. NCBI nr
Match: XP_022922259.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata]) HSP 1 Score: 96.7 bits (239), Expect = 9.1e-17 Identity = 49/75 (65.33%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of MS006252 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.8e-07 Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of MS006252 vs. ExPASy TrEMBL
Match: A0A6J1E2W0 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111430295 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.4e-17 Identity = 49/75 (65.33%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of MS006252 vs. ExPASy TrEMBL
Match: A0A6J1IAF4 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111471568 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.9e-15 Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of MS006252 vs. ExPASy TrEMBL
Match: A0A5A7TMU0 (Heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002240 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-12 Identity = 42/74 (56.76%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of MS006252 vs. ExPASy TrEMBL
Match: A0A1S3AUB4 (uncharacterized protein LOC103482783 OS=Cucumis melo OX=3656 GN=LOC103482783 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-12 Identity = 42/74 (56.76%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of MS006252 vs. ExPASy TrEMBL
Match: A0A0A0KNU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152270 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.3e-12 Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of MS006252 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08 Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of MS006252 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08 Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of MS006252 vs. TAIR 10
Match: AT5G23760.1 (Copper transport protein family ) HSP 1 Score: 47.0 bits (110), Expect = 7.7e-06 Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|