![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS005963 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGGAGGCAGAGGCAGAGAGAGAGGAGATTCGGATACCTGTTGGCGGGTCTTCTTCTGGTGAGCCTAATCGCCAGAATCGATTCCATTTCAGTCACCGTGAACGAGATTGAATGCGTCTACGAGTACGTATTGTACGAAGGCGACACCGTTTCAGGAAATTTCGTGGTGGTCGATCATGACATTTTCTGGGGCGCCGATCACCCCGGCATCGACTTTACTGTAAGCGCTAATCTTCCCCTCCGCAATCTGTTTTTGAATTTTTGTTTCCGACCGATTAAGATTGGATCTTGATTTTGGGGTGGGGGGGATCGGTTTTTAATTTCTAATTTTTCTGGGAAATTTTCTTCTCCGTTATGAAATTGGTGTAGACAGAAAATGGTAAAAGGTTGTTCGTTGATCTGGAAATGTTTGCCCGTTTGTTAATTGAACCTATAGGGCTCGTATGAGATGGTATTTTAGATTGATAATTGTATTTCTATCTCTTCCGAGCTGCGAGATGAACCGTTATTAAACTGAATGATCAATGGGTCGACAATTATAATCCTCTCTTCGGACCCGTCGCCACCTGACATCCATTGACCGTTCTATTTGTCTCACCTTCCAATAATGTTTTGCAATTTTAGTTTTCTTTGTTTTGGAGAATTTATGGTTCAATTGGCCAGGCATTTTCTAATTGCCGATCTATTGCTTTTTTCCTACGAGTCATAAATCGCTTATTGCACCTCAATTTCTCCGGTTTAATTATGGAGGGACTCATCACAAAGGGTCCTAAAGTGGTGGTGGAAACAAGGTTTAGGAAAGTATATTAGATGCAATTCCATTTCTTCTTTTAATCCATATGAATCTAGATGTGTTTTTTCTTTGGTTATGGTTGGCTGGATATTTGGGTATCCTGTATCTCTTGTTGGAATTTTTTATCTAGTGTCTGATGGTTACGTGTTCATAATAAAATGTTCGTTCGGAGACAACCTAATCTGGGTTATTTTACGTGCAGGTTACATCCCCCGCAGGTAATGTGGTACACTCTTTGAAGGAGACATCTGGTGACAAGTTTGAGTTTAAGGCTCCTCGCAGTGGAATGTATAAATTTTGTTTTCACAATCCCTACTCGACTCCGGAGACCGTTTCTTTCCACATACATGTTGGTCATATTCCAAACGAACATGACCTTGCCAAGGATGGTAATTGACTAACTTATATAAATGTTACACTTAGTGTGTTTCCAGGTCTTGGTTGCTATGATAATTCAACACGTTTCTGATCTCTCACTTTGTTGTGGTTGTTTCTTGCAGAACACCTAGACCCAATAAATGTTAAAATTGCCGAGCTTAGAGAGGCATTGGAGTCGGTCACTGCCGAGCAGAAATATTTGAAAGCACGTGATACACGCCACCGTCACAGTATGTGGTTTATTCTTGTGCATGGTTTTTGTTTTCTTAAATTCGTTTATTTATGCCGTTTCATGGAATTCTTGCTAGCTAATGTGATATCAACTCTTTGGCTCAAGATGGAAATCTTTCTTCTAAGACAACTCAACATAACTATCATGGATACAATCAGATCTCGATGTCTATGCATGGGAATTTTGACATATGATAGGTTAATAATGCATGTAGGATCTAATGTTCAAACCACTAACTGAATTTATTAATTTAACTTGGCTTCTACAATTGTCCACTAGCGTTATATGTCATGAAATTGTTTAAGAAAGTACACTTCTTTTTTTGATTTTAGTCCAATATCCTAATGTAGAGGTATANATAAAGAAACTATTTCATTGATATATGAAATATGAGAACAAAAGGCCCAAGAATAGGGCTACAAAAAGGCTCTCCAGTTAGATAAGAGGGAGGCATAACTGTAATGATGGAAAAGAGGGGAGCATTTACACCAAGAGATAACAAAAAAAACTATAGATTCGAAAATGAGGTGACGTGTGCGCTCCCTATCTTGGAAAATTCGCTGATTTCTTTCCGTCCAAATTGTCCACAGTAAAGCTCGGACAAAGAGTATATTTGACAATGATTTTGTTTTTCCTTTTGGTTTCAATTAATAATTTTCTTCTCCCCCCACTCCATCTTGCTTTTTGTTATGGAGTAGGGAGATAATATATTAGAAAGAGAACAGTGAAGGTAAGTATATCAGGAGAGATTGTAATTTCTTTTATTATTGTCTTTGGATTATAGATAAAGATATTGATGAAAAGTGATGTACTAAACGAGGAGAGATTGTGAAAGTAAGTATATCAGGAGAGATGGTCTATTCTCCAAAGAAAATGATAAAAGTAATCACGATCTCTCCTGATATACTTCATAACTCTTTTTACAGTTTCTCGCCAATCTACACACTTTGTACATAGGACCTTTTTCTCCTCTCTCCAATGTCAGTTACTCTTTCTGGACACATGTTAATTGGTTATATTTTTACTAAGCCTACAATGTAAACTCTTTTGAGTCTAGCGGTGATTTAAAATTTTAATTGATCAAGAGAATATGAGATATCATTCTCCCTTTCATGTCAATAGCCCACATGTTAGGATTTAATCATCAAATGAAAATATATTTAGTCCACACATGAGGGGAGAAATGAGAAAATGTTAAATTTATCCTAACCTGTTAACTAGTGATTCAACAGCACACGAGGAGTTCTTCAAGTCTGATTTACCTGTTATTCTGTTTTTTTTTTCTTTGCTATCTCTTTGTTACATCATTGTCGAGATCTTGAGTTCACTAGTGTATACAGGAAGTATTTTCCAAAAACTTATTCTGTTTTTTTTTTCTTTGCTATCTCTATGTTACATCATTGTCAAGATCATGAGTTCACTAGTGTATACAGGAAGTATTTTCCAAAAACTTATTCATCGGTTTTCTTTTGATGCAGCAAATGAGAGTACAAGAAAGCGTGTAATTTTCTACACAGTGGGAGAGTATTTGTTGCTTGCTGTTGTAAGTGGCCTTCAGGTCATTTACATCCGTCGGCTCTTCAGCAAGTCGGTTGGATATAACCGGGTG ATGGAGAGGAGGCAGAGGCAGAGAGAGAGGAGATTCGGATACCTGTTGGCGGGTCTTCTTCTGGTGAGCCTAATCGCCAGAATCGATTCCATTTCAGTCACCGTGAACGAGATTGAATGCGTCTACGAGTACGTATTGTACGAAGGCGACACCGTTTCAGGAAATTTCGTGGTGGTCGATCATGACATTTTCTGGGGCGCCGATCACCCCGGCATCGACTTTACTGTTACATCCCCCGCAGGTAATGTGGTACACTCTTTGAAGGAGACATCTGGTGACAAGTTTGAGTTTAAGGCTCCTCGCAGTGGAATGTATAAATTTTGTTTTCACAATCCCTACTCGACTCCGGAGACCGTTTCTTTCCACATACATGTTGGTCATATTCCAAACGAACATGACCTTGCCAAGGATGAACACCTAGACCCAATAAATGTTAAAATTGCCGAGCTTAGAGAGGCATTGGAGTCGGTCACTGCCGAGCAGAAATATTTGAAAGCACGTGATACACGCCACCGTCACACAAATGAGAGTACAAGAAAGCGTGTAATTTTCTACACAGTGGGAGAGTATTTGTTGCTTGCTGTTGTAAGTGGCCTTCAGGTCATTTACATCCGTCGGCTCTTCAGCAAGTCGGTTGGATATAACCGGGTG ATGGAGAGGAGGCAGAGGCAGAGAGAGAGGAGATTCGGATACCTGTTGGCGGGTCTTCTTCTGGTGAGCCTAATCGCCAGAATCGATTCCATTTCAGTCACCGTGAACGAGATTGAATGCGTCTACGAGTACGTATTGTACGAAGGCGACACCGTTTCAGGAAATTTCGTGGTGGTCGATCATGACATTTTCTGGGGCGCCGATCACCCCGGCATCGACTTTACTGTTACATCCCCCGCAGGTAATGTGGTACACTCTTTGAAGGAGACATCTGGTGACAAGTTTGAGTTTAAGGCTCCTCGCAGTGGAATGTATAAATTTTGTTTTCACAATCCCTACTCGACTCCGGAGACCGTTTCTTTCCACATACATGTTGGTCATATTCCAAACGAACATGACCTTGCCAAGGATGAACACCTAGACCCAATAAATGTTAAAATTGCCGAGCTTAGAGAGGCATTGGAGTCGGTCACTGCCGAGCAGAAATATTTGAAAGCACGTGATACACGCCACCGTCACACAAATGAGAGTACAAGAAAGCGTGTAATTTTCTACACAGTGGGAGAGTATTTGTTGCTTGCTGTTGTAAGTGGCCTTCAGGTCATTTACATCCGTCGGCTCTTCAGCAAGTCGGTTGGATATAACCGGGTG MERRQRQRERRFGYLLAGLLLVSLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFHIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRKRVIFYTVGEYLLLAVVSGLQVIYIRRLFSKSVGYNRV Homology
BLAST of MS005963 vs. NCBI nr
Match: XP_022138285.1 (transmembrane emp24 domain-containing protein p24beta3 [Momordica charantia]) HSP 1 Score: 430.3 bits (1105), Expect = 1.0e-116 Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0
BLAST of MS005963 vs. NCBI nr
Match: XP_038897452.1 (transmembrane emp24 domain-containing protein p24beta3 [Benincasa hispida]) HSP 1 Score: 406.0 bits (1042), Expect = 2.1e-109 Identity = 206/217 (94.93%), Postives = 209/217 (96.31%), Query Frame = 0
BLAST of MS005963 vs. NCBI nr
Match: XP_022939384.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita moschata] >KAG6597415.1 Transmembrane emp24 domain-containing protein p24beta3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028874.1 Transmembrane emp24 domain-containing protein p24beta3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107 Identity = 202/217 (93.09%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of MS005963 vs. NCBI nr
Match: XP_023538709.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107 Identity = 202/217 (93.09%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of MS005963 vs. NCBI nr
Match: XP_022974395.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita maxima]) HSP 1 Score: 398.7 bits (1023), Expect = 3.3e-107 Identity = 202/217 (93.09%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of MS005963 vs. ExPASy Swiss-Prot
Match: Q9LIL4 (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 7.6e-99 Identity = 178/217 (82.03%), Postives = 197/217 (90.78%), Query Frame = 0
BLAST of MS005963 vs. ExPASy Swiss-Prot
Match: Q9S7M9 (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana OX=3702 GN=At3g07680 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.0e-26 Identity = 65/187 (34.76%), Postives = 98/187 (52.41%), Query Frame = 0
BLAST of MS005963 vs. ExPASy Swiss-Prot
Match: Q769F9 (Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=empA PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17 Identity = 67/198 (33.84%), Postives = 105/198 (53.03%), Query Frame = 0
BLAST of MS005963 vs. ExPASy Swiss-Prot
Match: A7SXK3 (Transmembrane emp24 domain-containing protein OS=Nematostella vectensis OX=45351 GN=v1g194562 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.8e-14 Identity = 42/139 (30.22%), Postives = 76/139 (54.68%), Query Frame = 0
BLAST of MS005963 vs. ExPASy Swiss-Prot
Match: D3ZTX0 (Transmembrane emp24 domain-containing protein 7 OS=Rattus norvegicus OX=10116 GN=Tmed7 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.8e-13 Identity = 65/205 (31.71%), Postives = 97/205 (47.32%), Query Frame = 0
BLAST of MS005963 vs. ExPASy TrEMBL
Match: A0A6J1C917 (transmembrane emp24 domain-containing protein p24beta3 OS=Momordica charantia OX=3673 GN=LOC111009500 PE=3 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 4.9e-117 Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0
BLAST of MS005963 vs. ExPASy TrEMBL
Match: A0A6J1FH03 (transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita moschata OX=3662 GN=LOC111445313 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 5.5e-108 Identity = 202/217 (93.09%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of MS005963 vs. ExPASy TrEMBL
Match: A0A6J1IDU7 (transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita maxima OX=3661 GN=LOC111473076 PE=3 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107 Identity = 202/217 (93.09%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of MS005963 vs. ExPASy TrEMBL
Match: A0A5A7U264 (Transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00810 PE=3 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.3e-106 Identity = 201/217 (92.63%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of MS005963 vs. ExPASy TrEMBL
Match: A0A1S3AWG7 (transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo OX=3656 GN=LOC103483671 PE=3 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 3.0e-106 Identity = 201/217 (92.63%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of MS005963 vs. TAIR 10
Match: AT3G22845.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 361.3 bits (926), Expect = 5.4e-100 Identity = 178/217 (82.03%), Postives = 197/217 (90.78%), Query Frame = 0
BLAST of MS005963 vs. TAIR 10
Match: AT3G07680.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 121.7 bits (304), Expect = 7.2e-28 Identity = 65/187 (34.76%), Postives = 98/187 (52.41%), Query Frame = 0
BLAST of MS005963 vs. TAIR 10
Match: AT1G57620.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13 Identity = 56/205 (27.32%), Postives = 102/205 (49.76%), Query Frame = 0
BLAST of MS005963 vs. TAIR 10
Match: AT1G09580.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 69.3 bits (168), Expect = 4.3e-12 Identity = 46/169 (27.22%), Postives = 82/169 (48.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|