MS005439 (gene) Bitter gourd (TR) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCAAACCCATCTCAGAGGACCAAAGTCTCCTCTGCCTCCCAAGAAGCGATAAATCATGGCATCTCCATCGGAAGAACTTGGGCCTTCAGCGATGGCAGATATTCTTCAAACCCATCTCAGAGGACCAAAGTCTCCTCTGCCTCCCAAGAAGCGATAAATCATGGCATCTCCATCGGAAGAACTTGGGCCTTCAGCGATGGCAGATAT TCTTCAAACCCATCTCAGAGGACCAAAGTCTCCTCTGCCTCCCAAGAAGCGATAAATCATGGCATCTCCATCGGAAGAACTTGGGCCTTCAGCGATGGCAGATAT SSNPSQRTKVSSASQEAINHGISIGRTWAFSDGRY Homology
BLAST of MS005439 vs. NCBI nr
Match: XP_022132099.1 (mannan endo-1,4-beta-mannosidase 7-like [Momordica charantia]) HSP 1 Score: 62.4 bits (150), Expect = 9.0e-07 Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 0
BLAST of MS005439 vs. NCBI nr
Match: XP_038897716.1 (mannan endo-1,4-beta-mannosidase 7-like [Benincasa hispida]) HSP 1 Score: 61.6 bits (148), Expect = 1.5e-06 Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 0
BLAST of MS005439 vs. NCBI nr
Match: PON93416.1 (1,4-alpha-glucan-branching enzyme [Trema orientale]) HSP 1 Score: 55.8 bits (133), Expect = 8.4e-05 Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of MS005439 vs. NCBI nr
Match: XP_004147857.3 (mannan endo-1,4-beta-mannosidase 7 [Cucumis sativus] >KGN60129.2 hypothetical protein Csa_001474 [Cucumis sativus]) HSP 1 Score: 55.8 bits (133), Expect = 8.4e-05 Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
BLAST of MS005439 vs. NCBI nr
Match: AGG82699.1 (endo-1,4-beta-mannosidase [Morus alba var. multicaulis]) HSP 1 Score: 55.8 bits (133), Expect = 8.4e-05 Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of MS005439 vs. ExPASy Swiss-Prot
Match: Q9FJZ3 (Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana OX=3702 GN=MAN7 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.6e-06 Identity = 21/35 (60.00%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of MS005439 vs. ExPASy Swiss-Prot
Match: Q0JKM9 (Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MAN1 PE=2 SV=2) HSP 1 Score: 45.1 bits (105), Expect = 2.0e-04 Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0
BLAST of MS005439 vs. ExPASy TrEMBL
Match: A0A6J1BS42 (Mannan endo-1,4-beta-mannosidase OS=Momordica charantia OX=3673 GN=LOC111005053 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.4e-07 Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 0
BLAST of MS005439 vs. ExPASy TrEMBL
Match: A0A5B7B161 (Mannan endo-1,4-beta-mannosidase (Fragment) OS=Davidia involucrata OX=16924 GN=Din_030634 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.2e-06 Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 0
BLAST of MS005439 vs. ExPASy TrEMBL
Match: A0A0A0LDZ5 (Mannan endo-1,4-beta-mannosidase OS=Cucumis sativus OX=3659 GN=Csa_3G859700 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.1e-05 Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
BLAST of MS005439 vs. ExPASy TrEMBL
Match: M4N902 (Mannan endo-1,4-beta-mannosidase OS=Morus alba var. multicaulis OX=170012 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.1e-05 Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of MS005439 vs. ExPASy TrEMBL
Match: W9ST09 (Mannan endo-1,4-beta-mannosidase OS=Morus notabilis OX=981085 GN=L484_021941 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.1e-05 Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of MS005439 vs. TAIR 10
Match: AT5G66460.1 (Glycosyl hydrolase superfamily protein ) HSP 1 Score: 50.4 bits (119), Expect = 3.3e-07 Identity = 21/35 (60.00%), Postives = 30/35 (85.71%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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