MS005430 (gene) Bitter gourd (TR) v1

Overview


Name	MS005430
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MSC domain-containing protein
Location	scaffold641: 127637 .. 131185 (+)
RNA-Seq Expression	MS005430
Synteny	MS005430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCAACTCCGAAGAGGCGAAAGAAACTCAAGCCAAATCCGGACTCCGATGCCGGTTCTAAAGGCGATTCTTCTGCTTCATCTTCTACAGTGTTGCTGAAGTCTCTCAAGCAACCGCCTCGCGATTTCTTTCCCTCCGAGAACGATCTCATTAGGCTAATTACTGTACTTTTCATCGCCTGCTTGGTTTTTCTGAGCTGTAACTTCTTCGTATCTAGACTCGCGAGTCGCCGCCCGGAGCCTTTCTGCGACACTGACGCCGATTCCTTGGACTTGCTTTCTGGTAAGTAATGGCATTGTTACCTTCCTCGTGTATTTGGTGTTTTAAGAAAAGCGAAGATGAGGAAACTGAAAATGATGTTGGTGAACGCGCTGCAAGCTCTTTTTTGGATGTTCTACATGTAAACGGGTTTGTGTTGGTTGGTCATTTCTAGTTTTTGTTGGTTTTCTAGCATATGTTTTTTGTGTGATGTGATATTTTGTTTCTTTACGATTTGGATGCATATTTTAGGTCACTTTTTCTCATTGCATTTAGTTTTTCTATGCCAACAAGAATTCTGGTCACATGAAATGATGTTTTCACTTTTGAGTATAATGGCGCCACGAGCTAGTACGCTTTGTTATGGTAGAAGTAGAATGTGGAGCCAGACGAAACTGACGTGGGCGGCAGTAGAACCCGAGTGCCAGTGATTGATCTAATCATGTCAATTTTTTAGCCATTTTAGAGTGCTGAGAATCGCCCCTTGATTAATCCGGTGTTTAATTGTCTGTGGAATATTTAAAATTAACTTTTCATCTATCATATTGTGCTGTACAGTTAGTTATAGAACTTCAATACCAACTGTGTGCTTGTTTATTTTCTCATCAGGAAAATACCTACGTGATCATTGAATGAGGAAGTAACTTTAAAATTTTCAATTTCTTAAATGGTTTCTCGACTTGGAAACGTATATTTGTTTTATTTCAATTGTCAACTTGCTCTTTGGATATTTTGTAAACTTTGTCTAGAGATGAAGTAAACGTAAAATGTATTTTTTTTTATCCTCTTTGTTCACATGGCATCTTCTGTTTTTCTGTAAAAACTTAGCAGCCTTTCTATTTCATTTTACCCTAACATTTTCTTCTTATAATATTCCGTTTATTCTTATACATTCTCCAAGTTGAATGTACAGCCAATTTTGTTAATTTAATACGAATCAATCTGTTGATGTTCATTGTTTTGGTTTTTGTCTGGTAGTTCCATATTTCTCCTCAAAAAGTATCTTATTTCAGATGCTTGCAAGCCTTGTCCAAGTCATGGAGAATGCCGTGGAGGTGAGTTGGAATGTGTTCGTGGTTATAGAAAGCACGGAAGGTTATGCATAGAAGATGGAGTAATCAATGAAGCAGTTAAGAAACTTGTATGTAATGAGATTTTTTCCCTGGTAACTGTTGTTCTATTTTTCTCTCTTTTTCTCTGTCATAACTTCACACTTGTTCGTAACATTGTTTCAGTCAGAATGGCTAGAATCTCACCTCTGTGAAGCAAATGCCAAGTTCATGTGCGATGGAGTTGGGACAGTCTGGGTTTGTTATCTTGATGTCCCTATAAAAATTTTCTCTTTTATGTTTATTTCCCTCTCCGATAGCTCTGAAGCCTTTGCCCTTCTTTTTGTGTGGCACTTCTATTTCTCTTAATGAAAGACTTCTTTCTTATTAAGTGTTAAATTTAATCGGGCAAATTTAGCTGCACGTTTGATTTGGATGGACCAAGTATTTTTGTTGTTAGCATACGTAGTTTCAATTTGAATTCATTATCAGGTTAAAGAGGATGATATATGGGATGATTTAGATGGTCAAGCACTGGTGGAAAACATTGGCTCTGACAACACCACTTTTATGTATGCGAAGAGAAAGGCATTGGAAACTATTATTGGGTTATTTCAGACACAGCAAAATTCTCTTGGGTATGCCATTCAATATTTGTATAAAGCCTGAAGTTTAGTGGAAACAATGTATCATTTGATTGAATATGTGCTGATTGAATTTATTTGATTCCTTCTTGTTTAGGATCAAGGAATTGAAATGTCCAGATCTGCTGGCTGAAAGTTACAAGCCATTTACTTGCCGTATTCATCATTGGGTTTTGAAGCATGCTTTTGTTGTTTTGCCAGTTTTCTTACTGGTATTCTACTCTACAAGGGAGCTTTGAACTCATTAGGTTTTAGTTGCAATATGTTGAATCTAGTTGATGATATTGAGATGTACAGCTTGTGGGATGCACTTGGTTACTATGGAAACTTTACCGGAGACAACATCTAACAAATAGAGCTGAAAATCTGTACAACCAGGTATAAGGCCGTGGCTTTTTCAATTTTATTTTTTGAATAGTTCTTTTTCTTTTCATGATTTGCTTAGTCGTGAGGTTGGTTCTGGTTCTTAAATTAAGCTGAATCATGTCCTCTCAAGTCTCATCATGCATTTTCAGTGGGTTGTGTGATTAAATTTGTATATATTTAGATTGTCCTCTAGTATCAAGAAAATAGAAGTGTAAGACTTTTTCCAGCGACTAATTGGTTCCACTAGATTTTTCATTCTAGCGCTGAACTCTCTGTCTTCCTCACAGGTCTGCGAAATACTTGAGGAAAATGCTTTGATGTCAAAGAGAATAAGTGGTCAATGTGAATCATGGGTTGTTGCATCCAGGTTACGCGACCATCTTCTTTTGCCACGAGAGAGGAAGGATCCTTTGTTATGGAGGAAGGTATGATGTCCCTCCTGGACTTTCTCATTATGTGTTATTTCATTACATTTAGAATAAATTTATCTTATCCCAAATGTGAAGAACAATTGATCTTGGATCCTTAGGAGCTATCAAGCTATTAATTATTTCTTCATCTATTTTAGTATTGCGTGATTTTTTAATATAAAATTTTTTCTGAAGTAACAGTCTGGTTGGTGGTTGGAGTTCTTAATATTTGGTAACAGAGTTTGCCATACTACTTGGGACATTCAAATCCATTGAAACCTACCTAAAAAGTTAGTAATAATTTCATTTTTCTTTTTTCAACTTCAGATGCCATATATGAGGAAGAGGAATGGATTCTGAATTTTTGATGAATGAATCTTTCTATGACTCTAGCCATGGCTAAAATTTGGAATCCAACTAGTCCAAGTAATTGCCCAAGATGCTACCTTATTAAGTGTTAATAAACTCCATCAAGGAAGAGATCATATAGTCTGTTTGTCCTCTCCATATGCCAATTTGCAATCACTTAACTTGATGTTCTCCCTGATGCTTTCCCTTGTACTTTTTGTTTTTGGCCACACGCAAGTTCAACGAGACTGTTTTGTTTCTTGTAAATTTTATAAGTTCGTCTATTTGAGTAAAGTTTGACATTAATTTATTATATGTTTCCATGGTTTCTTTGATTTCTCTTTTAGGTAGAGGAATTGGTTCAGGAAGACTCACGAATAGATCGCTACCCGAGACTGGTCAAGGGTGAAGGAAAAGAAGTATGGGAATGGCAAGGTATGAAAATATTGCCCTTTATTTTCATTTCTTTT

mRNA sequence

ATGTCTTCAACTCCGAAGAGGCGAAAGAAACTCAAGCCAAATCCGGACTCCGATGCCGGTTCTAAAGGCGATTCTTCTGCTTCATCTTCTACAGTGTTGCTGAAGTCTCTCAAGCAACCGCCTCGCGATTTCTTTCCCTCCGAGAACGATCTCATTAGGCTAATTACTGTACTTTTCATCGCCTGCTTGGTTTTTCTGAGCTGTAACTTCTTCGTATCTAGACTCGCGAGTCGCCGCCCGGAGCCTTTCTGCGACACTGACGCCGATTCCTTGGACTTGCTTTCTGATGCTTGCAAGCCTTGTCCAAGTCATGGAGAATGCCGTGGAGGTGAGTTGGAATGTGTTCGTGGTTATAGAAAGCACGGAAGGTTATGCATAGAAGATGGAGTAATCAATGAAGCAGTTAAGAAACTTTCAGAATGGCTAGAATCTCACCTCTGTGAAGCAAATGCCAAGTTCATGTGCGATGGAGTTGGGACAGTCTGGGTTAAAGAGGATGATATATGGGATGATTTAGATGGTCAAGCACTGGTGGAAAACATTGGCTCTGACAACACCACTTTTATGTATGCGAAGAGAAAGGCATTGGAAACTATTATTGGGTTATTTCAGACACAGCAAAATTCTCTTGGGATCAAGGAATTGAAATGTCCAGATCTGCTGGCTGAAAGTTACAAGCCATTTACTTGCCGTATTCATCATTGGGTTTTGAAGCATGCTTTTGTTGTTTTGCCAGTTTTCTTACTGCTTGTGGGATGCACTTGGTTACTATGGAAACTTTACCGGAGACAACATCTAACAAATAGAGCTGAAAATCTGTACAACCAGGTCTGCGAAATACTTGAGGAAAATGCTTTGATGTCAAAGAGAATAAGTGGTCAATGTGAATCATGGGTTGTTGCATCCAGGTTACGCGACCATCTTCTTTTGCCACGAGAGAGGAAGGATCCTTTGTTATGGAGGAAGGTAGAGGAATTGGTTCAGGAAGACTCACGAATAGATCGCTACCCGAGACTGGTCAAGGGTGAAGGAAAAGAAGTATGGGAATGGCAAGGTATGAAAATATTGCCCTTTATTTTCATTTCTTTT

Coding sequence (CDS)

ATGTCTTCAACTCCGAAGAGGCGAAAGAAACTCAAGCCAAATCCGGACTCCGATGCCGGTTCTAAAGGCGATTCTTCTGCTTCATCTTCTACAGTGTTGCTGAAGTCTCTCAAGCAACCGCCTCGCGATTTCTTTCCCTCCGAGAACGATCTCATTAGGCTAATTACTGTACTTTTCATCGCCTGCTTGGTTTTTCTGAGCTGTAACTTCTTCGTATCTAGACTCGCGAGTCGCCGCCCGGAGCCTTTCTGCGACACTGACGCCGATTCCTTGGACTTGCTTTCTGATGCTTGCAAGCCTTGTCCAAGTCATGGAGAATGCCGTGGAGGTGAGTTGGAATGTGTTCGTGGTTATAGAAAGCACGGAAGGTTATGCATAGAAGATGGAGTAATCAATGAAGCAGTTAAGAAACTTTCAGAATGGCTAGAATCTCACCTCTGTGAAGCAAATGCCAAGTTCATGTGCGATGGAGTTGGGACAGTCTGGGTTAAAGAGGATGATATATGGGATGATTTAGATGGTCAAGCACTGGTGGAAAACATTGGCTCTGACAACACCACTTTTATGTATGCGAAGAGAAAGGCATTGGAAACTATTATTGGGTTATTTCAGACACAGCAAAATTCTCTTGGGATCAAGGAATTGAAATGTCCAGATCTGCTGGCTGAAAGTTACAAGCCATTTACTTGCCGTATTCATCATTGGGTTTTGAAGCATGCTTTTGTTGTTTTGCCAGTTTTCTTACTGCTTGTGGGATGCACTTGGTTACTATGGAAACTTTACCGGAGACAACATCTAACAAATAGAGCTGAAAATCTGTACAACCAGGTCTGCGAAATACTTGAGGAAAATGCTTTGATGTCAAAGAGAATAAGTGGTCAATGTGAATCATGGGTTGTTGCATCCAGGTTACGCGACCATCTTCTTTTGCCACGAGAGAGGAAGGATCCTTTGTTATGGAGGAAGGTAGAGGAATTGGTTCAGGAAGACTCACGAATAGATCGCTACCCGAGACTGGTCAAGGGTGAAGGAAAAGAAGTATGGGAATGGCAAGGTATGAAAATATTGCCCTTTATTTTCATTTCTTTT

Protein sequence

MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFIACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRKHGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVENIGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHAFVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVVASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQGMKILPFIFISF

Homology

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BLAST of MS005430 vs. NCBI nr
Match: XP_022159868.1 (uncharacterized protein LOC111026156 isoform X1 [Momordica charantia] >XP_022159869.1 uncharacterized protein LOC111026156 isoform X1 [Momordica charantia])

HSP 1 Score: 724.9 bits (1870), Expect = 3.4e-205
Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI
Sbjct: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK
Sbjct: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
           HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN
Sbjct: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           IGSDNTTFMYAKRKALETIIGLFQTQQNSLGI+ELKCPDLLAESYKPFTCRIHHWVLKHA
Sbjct: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIEELKCPDLLAESYKPFTCRIHHWVLKHA 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300
           FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV
Sbjct: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 352
           ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ
Sbjct: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 351

[Close]

BLAST of MS005430 vs. NCBI nr
Match: XP_022159870.1 (uncharacterized protein LOC111026156 isoform X2 [Momordica charantia])

HSP 1 Score: 724.9 bits (1870), Expect = 3.4e-205
Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI
Sbjct: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK
Sbjct: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
           HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN
Sbjct: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           IGSDNTTFMYAKRKALETIIGLFQTQQNSLGI+ELKCPDLLAESYKPFTCRIHHWVLKHA
Sbjct: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIEELKCPDLLAESYKPFTCRIHHWVLKHA 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300
           FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV
Sbjct: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 352
           ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ
Sbjct: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 351

[Close]

BLAST of MS005430 vs. NCBI nr
Match: XP_038888162.1 (uncharacterized protein LOC120078048 [Benincasa hispida])

HSP 1 Score: 635.6 bits (1638), Expect = 2.7e-178
Identity = 300/351 (85.47%), Postives = 328/351 (93.45%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           MSSTPK+R K+K N +SD GS+GDSS SSST+LLKS+K+PPRDFFPS++DL  LITVLFI
Sbjct: 1   MSSTPKKRTKVKRNTNSDVGSRGDSSVSSSTMLLKSIKEPPRDFFPSKDDLAALITVLFI 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           ACL+F+SC+FFVSRLASR+P PFCDTDADSLDLLSD C+PCP HGECR G+L+C+ GYRK
Sbjct: 61  ACLIFVSCDFFVSRLASRQPRPFCDTDADSLDLLSDVCEPCPRHGECRDGKLKCLHGYRK 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
           HGRLCIEDGVINEAV KLSEWLESHLCEANAKF+CDG+G VWVKEDDIWDDLDG+ LVE+
Sbjct: 121 HGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKEDDIWDDLDGKELVES 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           IGSDNTT  YAK KALETI GLFQT+QNSLGIKELKCPDLLAESYKPFTCRI HWVL+HA
Sbjct: 181 IGSDNTTLTYAKSKALETIGGLFQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWVLQHA 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300
           F VLPVFLLLVGCTWLLWKLYRRQ++TNRAE+LYNQVCEILEENALMS R SGQCESWVV
Sbjct: 241 FAVLPVFLLLVGCTWLLWKLYRRQYITNRAEDLYNQVCEILEENALMSTRNSGQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 352
           ASRLRDHLLLPRERK+PLLWRKVEELVQEDSRIDRYPRLVKG+GKEVWEWQ
Sbjct: 301 ASRLRDHLLLPRERKNPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ 351

[Close]

BLAST of MS005430 vs. NCBI nr
Match: XP_016903563.1 (PREDICTED: uncharacterized protein LOC103503505 isoform X4 [Cucumis melo])

HSP 1 Score: 620.5 bits (1599), Expect = 8.9e-174
Identity = 297/357 (83.19%), Postives = 324/357 (90.76%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           MSSTPK+R K+K NP+SD GS  DSS SSS++LLKS+K+PPRDFFPS++DL  LITVL I
Sbjct: 1   MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLII 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           A LVF+SCNFFVSRL+SR P PFCDTDADSLDLLSD C+PCP HGECR G+LEC+ GYRK
Sbjct: 61  ASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEPCPRHGECRDGKLECLHGYRK 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
           HGRLCIEDGVINEAV KLSEWLESHLCE+NAKF+CDG+G VWVKE+DIWDDLDG+ LVE+
Sbjct: 121 HGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVES 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           IGSDNTT MYAK KALETI GL QT+QNS GIKELKCPDLLAESYKPFTCRI HWVL+HA
Sbjct: 181 IGSDNTTLMYAKSKALETIGGLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHA 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300
           FVVLPVFLLLVGCTWLLWKLYRRQ+LTNRAE+LYNQVCEILEENAL S R S QCESWVV
Sbjct: 241 FVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQGMKILP 358
           ASRLRDHLLLPRERK+PLLW+KVEELVQEDSRIDRYPRLVKG+GKEVWEWQ    LP
Sbjct: 301 ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQENTRLP 357

[Close]

BLAST of MS005430 vs. NCBI nr
Match: KAA0038534.1 (MSC domain-containing protein [Cucumis melo var. makuwa] >TYK31131.1 MSC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 618.6 bits (1594), Expect = 3.4e-173
Identity = 295/351 (84.05%), Postives = 322/351 (91.74%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           MSSTPK+R K+K NP+SD GS  DSS SSS++LLKS+K+PPRDFFPS++DL  LITVL I
Sbjct: 1   MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLII 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           A LVF+SCNFFVSRL+SR P PFCDTDADSLDLLSD C+PCP HGECR G+LEC+ GYRK
Sbjct: 61  ASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEPCPRHGECRDGKLECLHGYRK 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
           HGRLCIEDGVINEAV KLSEWLESHLCE+NAKF+CDG+G VWVKE+DIWDDLDG+ LVE+
Sbjct: 121 HGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVES 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           IGSDNTT MYAK KALETI GL QT+QNS GIKELKCPDLLAESYKPFTCRI HWVL+HA
Sbjct: 181 IGSDNTTLMYAKSKALETIGGLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHA 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300
           FVVLPVFLLLVGCTWLLWKLYRRQ+LTNRAE+LYNQVCEILEENAL S R S QCESWVV
Sbjct: 241 FVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 352
           ASRLRDHLLLPRERK+PLLW+KVEELVQEDSRIDRYPRLVKG+GKEVWEWQ
Sbjct: 301 ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ 351

[Close]

BLAST of MS005430 vs. ExPASy TrEMBL
Match: A0A6J1E026 (uncharacterized protein LOC111026156 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026156 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.6e-205
Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI
Sbjct: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK
Sbjct: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
           HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN
Sbjct: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           IGSDNTTFMYAKRKALETIIGLFQTQQNSLGI+ELKCPDLLAESYKPFTCRIHHWVLKHA
Sbjct: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIEELKCPDLLAESYKPFTCRIHHWVLKHA 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300
           FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV
Sbjct: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 352
           ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ
Sbjct: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 351

[Close]

BLAST of MS005430 vs. ExPASy TrEMBL
Match: A0A6J1E002 (uncharacterized protein LOC111026156 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026156 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.6e-205
Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI
Sbjct: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK
Sbjct: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
           HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN
Sbjct: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           IGSDNTTFMYAKRKALETIIGLFQTQQNSLGI+ELKCPDLLAESYKPFTCRIHHWVLKHA
Sbjct: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIEELKCPDLLAESYKPFTCRIHHWVLKHA 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300
           FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV
Sbjct: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 352
           ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ
Sbjct: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 351

[Close]

BLAST of MS005430 vs. ExPASy TrEMBL
Match: A0A1S4E5Q9 (uncharacterized protein LOC103503505 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103503505 PE=4 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 4.3e-174
Identity = 297/357 (83.19%), Postives = 324/357 (90.76%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           MSSTPK+R K+K NP+SD GS  DSS SSS++LLKS+K+PPRDFFPS++DL  LITVL I
Sbjct: 1   MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLII 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           A LVF+SCNFFVSRL+SR P PFCDTDADSLDLLSD C+PCP HGECR G+LEC+ GYRK
Sbjct: 61  ASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEPCPRHGECRDGKLECLHGYRK 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
           HGRLCIEDGVINEAV KLSEWLESHLCE+NAKF+CDG+G VWVKE+DIWDDLDG+ LVE+
Sbjct: 121 HGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVES 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           IGSDNTT MYAK KALETI GL QT+QNS GIKELKCPDLLAESYKPFTCRI HWVL+HA
Sbjct: 181 IGSDNTTLMYAKSKALETIGGLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHA 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300
           FVVLPVFLLLVGCTWLLWKLYRRQ+LTNRAE+LYNQVCEILEENAL S R S QCESWVV
Sbjct: 241 FVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQGMKILP 358
           ASRLRDHLLLPRERK+PLLW+KVEELVQEDSRIDRYPRLVKG+GKEVWEWQ    LP
Sbjct: 301 ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQENTRLP 357

[Close]

BLAST of MS005430 vs. ExPASy TrEMBL
Match: A0A5A7T509 (MSC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004100 PE=4 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 1.6e-173
Identity = 295/351 (84.05%), Postives = 322/351 (91.74%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           MSSTPK+R K+K NP+SD GS  DSS SSS++LLKS+K+PPRDFFPS++DL  LITVL I
Sbjct: 1   MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLII 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           A LVF+SCNFFVSRL+SR P PFCDTDADSLDLLSD C+PCP HGECR G+LEC+ GYRK
Sbjct: 61  ASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEPCPRHGECRDGKLECLHGYRK 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
           HGRLCIEDGVINEAV KLSEWLESHLCE+NAKF+CDG+G VWVKE+DIWDDLDG+ LVE+
Sbjct: 121 HGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVES 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           IGSDNTT MYAK KALETI GL QT+QNS GIKELKCPDLLAESYKPFTCRI HWVL+HA
Sbjct: 181 IGSDNTTLMYAKSKALETIGGLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHA 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300
           FVVLPVFLLLVGCTWLLWKLYRRQ+LTNRAE+LYNQVCEILEENAL S R S QCESWVV
Sbjct: 241 FVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 352
           ASRLRDHLLLPRERK+PLLW+KVEELVQEDSRIDRYPRLVKG+GKEVWEWQ
Sbjct: 301 ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ 351

[Close]

BLAST of MS005430 vs. ExPASy TrEMBL
Match: A0A1S4E5R9 (uncharacterized protein LOC103503505 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503505 PE=4 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 1.6e-173
Identity = 295/351 (84.05%), Postives = 322/351 (91.74%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           MSSTPK+R K+K NP+SD GS  DSS SSS++LLKS+K+PPRDFFPS++DL  LITVL I
Sbjct: 1   MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLII 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           A LVF+SCNFFVSRL+SR P PFCDTDADSLDLLSD C+PCP HGECR G+LEC+ GYRK
Sbjct: 61  ASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEPCPRHGECRDGKLECLHGYRK 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
           HGRLCIEDGVINEAV KLSEWLESHLCE+NAKF+CDG+G VWVKE+DIWDDLDG+ LVE+
Sbjct: 121 HGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVES 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           IGSDNTT MYAK KALETI GL QT+QNS GIKELKCPDLLAESYKPFTCRI HWVL+HA
Sbjct: 181 IGSDNTTLMYAKSKALETIGGLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHA 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRISGQCESWVV 300
           FVVLPVFLLLVGCTWLLWKLYRRQ+LTNRAE+LYNQVCEILEENAL S R S QCESWVV
Sbjct: 241 FVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV 300

Query: 301 ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 352
           ASRLRDHLLLPRERK+PLLW+KVEELVQEDSRIDRYPRLVKG+GKEVWEWQ
Sbjct: 301 ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ 351

[Close]

BLAST of MS005430 vs. TAIR 10
Match: AT5G46560.1 (CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 332.4 bits (851), Expect = 4.5e-91
Identity = 161/352 (45.74%), Postives = 230/352 (65.34%), Query Frame = 0


Query: 1   MSSTPKRRKKLKPNPDSDAGSKGDSSASSSTVLLKSLKQPPRDFFPSENDLIRLITVLFI 60
           M S P++R    P  ++  G    SS+SSS +  +S+ +PP+  FPS+ +   L+ VL +
Sbjct: 1   MDSIPRKR----PKSETRTGRTPKSSSSSSPI--RSMLEPPQSLFPSKGEFFTLLKVLLV 60

Query: 61  ACLVFLSCNFFVSRLASRRPEPFCDTDADSLDLLSDACKPCPSHGECRGGELECVRGYRK 120
           AC V  +CNF    L+S   + FCD++ + +D   D C+PCP +GEC  G+L+C  GY+ 
Sbjct: 61  ACAVAFTCNFLSKSLSSNPSKSFCDSNFNPIDSDLDICEPCPINGECYQGKLQCNLGYKN 120

Query: 121 HGRLCIEDGVINEAVKKLSEWLESHLCEANAKFMCDGVGTVWVKEDDIWDDLDGQALVEN 180
              LC+EDG INE+ KKL  + E  +CE+ A   C G GT+WV E+D+W +L   + + N
Sbjct: 121 QRNLCVEDGEINESTKKLVGYFERKVCESYAHNECYGTGTIWVPENDVWTELRSNSFLSN 180

Query: 181 IGSDNTTFMYAKRKALETIIGLFQTQQNSLGIKELKCPDLLAESYKPFTCRIHHWVLKHA 240
           +  D + + + K KA+E +  L + + NS GI ELKCP+ +A+SYKP TCR+H W+L+H 
Sbjct: 181 L--DESAYNFLKGKAVEGVTELLEKRTNSNGIDELKCPESVAKSYKPLTCRLHQWILRHI 240

Query: 241 FVVLPVFLLLVGCTWLLWKLYRRQHLTNRAENLYNQVCEILEENALMSKRI-SGQCESWV 300
            ++     +LVG   L  ++ R+Q  + R E LY+QVC+ LEENA+ S    +  CE WV
Sbjct: 241 LIISSSCAMLVGSAMLRRRIQRKQCFSRRVEELYDQVCDFLEENAVASNSAETSNCEPWV 300

Query: 301 VASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGEGKEVWEWQ 352
           +AS LRD+LLLPRER+DPLLW KVEEL++EDSRIDRY +L+KGE K VWEWQ
Sbjct: 301 IASWLRDYLLLPRERRDPLLWTKVEELIKEDSRIDRYEKLLKGEKKVVWEWQ 344

The following BLAST results are available for this feature:

BLAST of MS005430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159868.1	3.4e-205	99.72	uncharacterized protein LOC111026156 isoform X1 [Momordica charantia] >XP_022159...	[more]
XP_022159870.1	3.4e-205	99.72	uncharacterized protein LOC111026156 isoform X2 [Momordica charantia]	[more]
XP_038888162.1	2.7e-178	85.47	uncharacterized protein LOC120078048 [Benincasa hispida]	[more]
XP_016903563.1	8.9e-174	83.19	PREDICTED: uncharacterized protein LOC103503505 isoform X4 [Cucumis melo]	[more]
KAA0038534.1	3.4e-173	84.05	MSC domain-containing protein [Cucumis melo var. makuwa] >TYK31131.1 MSC domain-...	[more]

BLAST of MS005430 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS005430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E026	1.6e-205	99.72	uncharacterized protein LOC111026156 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1E002	1.6e-205	99.72	uncharacterized protein LOC111026156 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S4E5Q9	4.3e-174	83.19	uncharacterized protein LOC103503505 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7T509	1.6e-173	84.05	MSC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S4E5R9	1.6e-173	84.05	uncharacterized protein LOC103503505 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MS005430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46560.1	4.5e-91	45.74	CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018996	Man1/Src1, C-terminal	PFAM	PF09402	MSC	coord: 91..352 e-value: 6.9E-15 score: 55.3
IPR041885	MAN1, winged-helix domain	GENE3D	1.10.10.1180		coord: 256..350 e-value: 1.1E-12 score: 50.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
IPR044780	Heh2/Src1-like	PANTHER	PTHR47808	INNER NUCLEAR MEMBRANE PROTEIN HEH2-RELATED	coord: 51..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005430.1	MS005430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005637	nuclear inner membrane
molecular_function	GO:0003682	chromatin binding