MS005429 (gene) Bitter gourd (TR) v1

Overview


Name	MS005429
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	vacuolar protein sorting-associated protein 55 homolog
Location	scaffold641: 124742 .. 125124 (-)
RNA-Seq Expression	MS005429
Synteny	MS005429

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTTGCAGTGATTATGTACATTCTTCTCCCAATGCCTTTGCTGTTTTTCGCTGGCTCCGATACTTCCTCACTATCTTCTGAATCTGGAGACAGGTTTGTTTCTGATCATCATACTTCATTCTCAATCCCAGACAAATAAAACCCATGCGTAGACTCTATAACACGTTTATTTTTAACGATTACCGAAATAGCTGGGTGAATGCGACTAAATTTTTAACTGGAGCTTCAACGGTTGGAAGCATTGCAATACCTGTAATTTTGAAGCATGCTAATATTATCAGCTGGGGAGCACTTGCACTGGATCTCTCGTCCCTTTTAGTCTTTGTGGTGGCCATTTTGTGTTATCTATGGATGAGTAATGAAGATGACTACAATATACTC

mRNA sequence

ATTCTTGCAGTGATTATGTACATTCTTCTCCCAATGCCTTTGCTGTTTTTCGCTGGCTCCGATACTTCCTCACTATCTTCTGAATCTGGAGACAGCTGGGTGAATGCGACTAAATTTTTAACTGGAGCTTCAACGGTTGGAAGCATTGCAATACCTGTAATTTTGAAGCATGCTAATATTATCAGCTGGGGAGCACTTGCACTGGATCTCTCGTCCCTTTTAGTCTTTGTGGTGGCCATTTTGTGTTATCTATGGATGAGTAATGAAGATGACTACAATATACTC

Coding sequence (CDS)

ATTCTTGCAGTGATTATGTACATTCTTCTCCCAATGCCTTTGCTGTTTTTCGCTGGCTCCGATACTTCCTCACTATCTTCTGAATCTGGAGACAGCTGGGTGAATGCGACTAAATTTTTAACTGGAGCTTCAACGGTTGGAAGCATTGCAATACCTGTAATTTTGAAGCATGCTAATATTATCAGCTGGGGAGCACTTGCACTGGATCTCTCGTCCCTTTTAGTCTTTGTGGTGGCCATTTTGTGTTATCTATGGATGAGTAATGAAGATGACTACAATATACTC

Protein sequence

ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANIISWGALALDLSSLLVFVVAILCYLWMSNEDDYNIL

Homology

[Close]

BLAST of MS005429 vs. NCBI nr
Match: XP_022157395.1 (vacuolar protein sorting-associated protein 55 homolog [Momordica charantia] >XP_022157399.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia])

HSP 1 Score: 174.1 bits (440), Expect = 5.8e-40
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI
Sbjct: 40  LLSVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 99

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDDYNIL 96
           I WGALALDLSSLLVFVVAILCYLWMSNEDDYN L
Sbjct: 100 IGWGALALDLSSLLVFVVAILCYLWMSNEDDYNTL 134

[Close]

BLAST of MS005429 vs. NCBI nr
Match: XP_022155500.1 (vacuolar protein sorting-associated protein 55 homolog [Momordica charantia] >XP_022155501.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia])

HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31
Identity = 71/91 (78.02%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFF GSD+SSL +ES DSW+NATKFLTGAST+GSIAIP+ILKHA I
Sbjct: 44  MLSVIMYVLLPMPLLFFGGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHAGI 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDD 92
           I WGALA+DLSS LVFV+AILC+LWM+ +DD
Sbjct: 104 IGWGALAMDLSSFLVFVIAILCFLWMNEDDD 134

[Close]

BLAST of MS005429 vs. NCBI nr
Match: XP_004150170.1 (vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >XP_031739448.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >XP_031739449.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >KGN55797.1 hypothetical protein Csa_009853 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 3.7e-31
Identity = 72/94 (76.60%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFFAGSD+SSL ++S DSW+NATKFLTGASTVGSIAIPVILKHA I
Sbjct: 44  MLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGI 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDDYNI 95
           I WGA+A+DLSS +VFVVAILC++ MS +DDY++
Sbjct: 104 IGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSM 137

[Close]

BLAST of MS005429 vs. NCBI nr
Match: XP_008448742.1 (PREDICTED: vacuolar protein sorting-associated protein 55 homolog [Cucumis melo] >XP_008448744.1 PREDICTED: vacuolar protein sorting-associated protein 55 homolog [Cucumis melo] >XP_016900672.1 PREDICTED: vacuolar protein sorting-associated protein 55 homolog [Cucumis melo] >XP_016900673.1 PREDICTED: vacuolar protein sorting-associated protein 55 homolog [Cucumis melo] >KAA0053070.1 vacuolar protein sorting-associated protein 55-like protein [Cucumis melo var. makuwa] >TYK11525.1 vacuolar protein sorting-associated protein 55-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 144.8 bits (364), Expect = 3.7e-31
Identity = 72/94 (76.60%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFFAGSD+SSL ++S DSW+NATKFLTGASTVGSIAIPVILKHA I
Sbjct: 44  MLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGI 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDDYNI 95
           I WGA+A+DLSS +VFVVAILC++ MS +DDY++
Sbjct: 104 IGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSM 137

[Close]

BLAST of MS005429 vs. NCBI nr
Match: XP_038906097.1 (vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida] >XP_038906098.1 vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida])

HSP 1 Score: 141.7 bits (356), Expect = 3.2e-30
Identity = 69/94 (73.40%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFFAGSD+SSL ++S +SW+NATKFLTGASTVGSIAIP+ILKHA I
Sbjct: 44  MLSVIMYVLLPMPLLFFAGSDSSSLYTDSNNSWINATKFLTGASTVGSIAIPIILKHAGI 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDDYNI 95
           I WGA+A+DLSS +VFV+AILC++ MS +DDY +
Sbjct: 104 IGWGAMAMDLSSFVVFVIAILCFMGMSEDDDYTM 137

[Close]

BLAST of MS005429 vs. ExPASy Swiss-Prot
Match: Q9AST6 (Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana OX=3702 GN=At1g32410 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.6e-27
Identity = 62/91 (68.13%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFF GSD++SL +ES +SW+NA KFLTGAS VGS+AIP ILKHA +
Sbjct: 44  MLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGL 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDD 92
           I WGALALDLSS +VF+VAIL Y+ + +  D
Sbjct: 104 IGWGALALDLSSYVVFLVAILGYICIGDASD 134

[Close]

BLAST of MS005429 vs. ExPASy Swiss-Prot
Match: Q54VP1 (Vacuolar protein sorting-associated protein 55 homolog OS=Dictyostelium discoideum OX=44689 GN=vps55 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 6.9e-04
Identity = 34/96 (35.42%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           I+ V  Y L P P +     D  S SSE G ++ +   FLTG       AIP+IL H++I
Sbjct: 32  IIVVASYFLAPFPNILCRNRD--SFSSEKG-TFEDIGLFLTGLFITSGFAIPMILAHSDI 91

Query: 61  ISWGALALDLSSLLVFVVAILCYLWM---SNEDDYN 94
           IS  ALA  ++  +     I+ +LW     N++D N
Sbjct: 92  ISGKALAFSMAGGVTVYATIITFLWFFNRHNDEDNN 124

[Close]

BLAST of MS005429 vs. ExPASy TrEMBL
Match: A0A6J1DSZ0 (vacuolar protein sorting-associated protein 55 homolog OS=Momordica charantia OX=3673 GN=LOC111024101 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.8e-40
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI
Sbjct: 40  LLSVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 99

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDDYNIL 96
           I WGALALDLSSLLVFVVAILCYLWMSNEDDYN L
Sbjct: 100 IGWGALALDLSSLLVFVVAILCYLWMSNEDDYNTL 134

[Close]

BLAST of MS005429 vs. ExPASy TrEMBL
Match: A0A6J1DML0 (vacuolar protein sorting-associated protein 55 homolog OS=Momordica charantia OX=3673 GN=LOC111022633 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.2e-32
Identity = 71/91 (78.02%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFF GSD+SSL +ES DSW+NATKFLTGAST+GSIAIP+ILKHA I
Sbjct: 44  MLSVIMYVLLPMPLLFFGGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHAGI 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDD 92
           I WGALA+DLSS LVFV+AILC+LWM+ +DD
Sbjct: 104 IGWGALAMDLSSFLVFVIAILCFLWMNEDDD 134

[Close]

BLAST of MS005429 vs. ExPASy TrEMBL
Match: A0A1S3BJT4 (vacuolar protein sorting-associated protein 55 homolog OS=Cucumis melo OX=3656 GN=LOC103490815 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31
Identity = 72/94 (76.60%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFFAGSD+SSL ++S DSW+NATKFLTGASTVGSIAIPVILKHA I
Sbjct: 44  MLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGI 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDDYNI 95
           I WGA+A+DLSS +VFVVAILC++ MS +DDY++
Sbjct: 104 IGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSM 137

[Close]

BLAST of MS005429 vs. ExPASy TrEMBL
Match: A0A5D3CIX3 (Vacuolar protein sorting-associated protein 55-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001910 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31
Identity = 72/94 (76.60%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFFAGSD+SSL ++S DSW+NATKFLTGASTVGSIAIPVILKHA I
Sbjct: 44  MLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGI 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDDYNI 95
           I WGA+A+DLSS +VFVVAILC++ MS +DDY++
Sbjct: 104 IGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSM 137

[Close]

BLAST of MS005429 vs. ExPASy TrEMBL
Match: A0A0A0L5B3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G016420 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31
Identity = 72/94 (76.60%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFFAGSD+SSL ++S DSW+NATKFLTGASTVGSIAIPVILKHA I
Sbjct: 44  MLSVIMYVLLPMPLLFFAGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGI 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDDYNI 95
           I WGA+A+DLSS +VFVVAILC++ MS +DDY++
Sbjct: 104 IGWGAMAMDLSSFVVFVVAILCFMGMSEDDDYSM 137

[Close]

BLAST of MS005429 vs. TAIR 10
Match: AT1G32410.1 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 120.9 bits (302), Expect = 5.4e-28
Identity = 62/91 (68.13%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFF GSD++SL +ES +SW+NA KFLTGAS VGS+AIP ILKHA +
Sbjct: 44  MLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGL 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDD 92
           I WGALALDLSS +VF+VAIL Y+ + +  D
Sbjct: 104 IGWGALALDLSSYVVFLVAILGYICIGDASD 134

[Close]

BLAST of MS005429 vs. TAIR 10
Match: AT1G32410.2 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 120.9 bits (302), Expect = 5.4e-28
Identity = 62/91 (68.13%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFF GSD++SL +ES +SW+NA KFLTGAS VGS+AIP ILKHA +
Sbjct: 44  MLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGL 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDD 92
           I WGALALDLSS +VF+VAIL Y+ + +  D
Sbjct: 104 IGWGALALDLSSYVVFLVAILGYICIGDASD 134

[Close]

BLAST of MS005429 vs. TAIR 10
Match: AT1G32410.3 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 120.9 bits (302), Expect = 5.4e-28
Identity = 62/91 (68.13%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFF GSD++SL +ES +SW+NA KFLTGAS VGS+AIP ILKHA +
Sbjct: 44  MLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGL 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDD 92
           I WGALALDLSS +VF+VAIL Y+ + +  D
Sbjct: 104 IGWGALALDLSSYVVFLVAILGYICIGDASD 134

[Close]

BLAST of MS005429 vs. TAIR 10
Match: AT1G32410.4 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 120.9 bits (302), Expect = 5.4e-28
Identity = 62/91 (68.13%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFF GSD++SL +ES +SW+NA KFLTGAS VGS+AIP ILKHA +
Sbjct: 44  MLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGL 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDD 92
           I WGALALDLSS +VF+VAIL Y+ + +  D
Sbjct: 104 IGWGALALDLSSYVVFLVAILGYICIGDASD 134

[Close]

BLAST of MS005429 vs. TAIR 10
Match: AT1G32410.5 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 120.9 bits (302), Expect = 5.4e-28
Identity = 62/91 (68.13%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1   ILAVIMYILLPMPLLFFAGSDTSSLSSESGDSWVNATKFLTGASTVGSIAIPVILKHANI 60
           +L+VIMY+LLPMPLLFF GSD++SL +ES +SW+NA KFLTGAS VGS+AIP ILKHA +
Sbjct: 44  MLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGL 103

Query: 61  ISWGALALDLSSLLVFVVAILCYLWMSNEDD 92
           I WGALALDLSS +VF+VAIL Y+ + +  D
Sbjct: 104 IGWGALALDLSSYVVFLVAILGYICIGDASD 134

The following BLAST results are available for this feature:

BLAST of MS005429 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157395.1	5.8e-40	95.79	vacuolar protein sorting-associated protein 55 homolog [Momordica charantia] >XP...	[more]
XP_022155500.1	1.3e-31	78.02	vacuolar protein sorting-associated protein 55 homolog [Momordica charantia] >XP...	[more]
XP_004150170.1	3.7e-31	76.60	vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >XP_031...	[more]
XP_008448742.1	3.7e-31	76.60	PREDICTED: vacuolar protein sorting-associated protein 55 homolog [Cucumis melo]...	[more]
XP_038906097.1	3.2e-30	73.40	vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida] >XP_0...	[more]

BLAST of MS005429 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AST6	7.6e-27	68.13	Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana O...	[more]
Q54VP1	6.9e-04	35.42	Vacuolar protein sorting-associated protein 55 homolog OS=Dictyostelium discoide...	[more]

BLAST of MS005429 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSZ0	2.8e-40	95.79	vacuolar protein sorting-associated protein 55 homolog OS=Momordica charantia OX...	[more]
A0A6J1DML0	6.2e-32	78.02	vacuolar protein sorting-associated protein 55 homolog OS=Momordica charantia OX...	[more]
A0A1S3BJT4	1.8e-31	76.60	vacuolar protein sorting-associated protein 55 homolog OS=Cucumis melo OX=3656 G...	[more]
A0A5D3CIX3	1.8e-31	76.60	Vacuolar protein sorting-associated protein 55-like protein OS=Cucumis melo var....	[more]
A0A0A0L5B3	1.8e-31	76.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G016420 PE=3 SV=1	[more]

BLAST of MS005429 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32410.1	5.4e-28	68.13	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.2	5.4e-28	68.13	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.3	5.4e-28	68.13	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.4	5.4e-28	68.13	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.5	5.4e-28	68.13	Vacuolar protein sorting 55 (VPS55) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007262	Vps55/LEPROT	PFAM	PF04133	Vps55	coord: 2..90 e-value: 6.0E-21 score: 74.6
IPR007262	Vps55/LEPROT	PANTHER	PTHR12050	LEPTIN RECEPTOR-RELATED	coord: 1..92
None	No IPR available	PANTHER	PTHR12050:SF1	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005429.1	MS005429.1	mRNA