MS005424 (gene) Bitter gourd (TR) v1

Overview


Name	MS005424
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ras-related protein RABH1b
Location	scaffold641: 94776 .. 100053 (+)
RNA-Seq Expression	MS005424
Synteny	MS005424

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCAGTGTCAGCTCTCGCGAAGTATAAGCTGGTCTTTCTCGGAGACCAGTCTGTTGGGAAAACCAGCATCATCACACGCTTCATGTACGACAAATTCGACAATACGTATCAGGTAATTTCCCGCAGAATCGTTAATCGCGTAGATCCTTGCTTGTATCGTGCGTTGTGGCCGGATCGGTTTGGAAACTGATACTGAATGTCTGATCTTGTAGCTTTCATCATTAATTTTGATTTCTCTTCTTTCCATCTGCAATTTTCTTTTCTTGTATGCGGCTTTCTTTTCTGTTGCGTCTGGTTGCATAATCGGAGACGACGAGAGCTCGGTGTTTATGGTTTTAGATCTTTCGGCTTTTATTCATCGGCGATCAGCATTTTCTTTTGCTCACTATGTATTTTTTTTCAATATTTTAGTTCCTAGTCGAGAGTTCAGTAAATAAACAGAGATTTAAGTTTATGATTCCCAGCTTGCTGCTTCCGGGCTAACGATGTTCAGATTTTAGCGTTGTTTGTTGCCAACAACAGCAGTCTGTTGTACTAGTGTACCGAGTGCGCCTCACTGAATTGGATCGAAGTGAGAAGTCCGGATTTTCTTTAATGCCTCTCTTTCAGCTAATTTAAATCTAGACCATTGTTCTGGAATCAAGCTCTGACTCCTTACTGACTTTTGTGGACAGAAAAGCTTTTTGATTTTTGCTCCCCCTATTTTACTTTGTTGGTCTTTCTGAAGAATACGTTGGTTGATTTTGTATGATAAACTACCTATGTTACATTACTTAGCATGTGAAATATTTAGTTCCTACCTAATGGAGTTGCGTGGGCATTGCTAGGAATCCAACTGCTAACTTGATAGTGCAATAATGGGTTCCATTTCGATACATTGACAAATATTTATGAAATCACTTTAATGGTCAACTCGGTAATTTTAGTTACATCAACTTGTTACAGCATGAAACATGATTTGACTTCAATTATTGTATCTGCATTAACAGCATGACATGATAAGTCATAAATGGTCCTGGGACGTTTTTGTCACTGCTTCTATGGAGAAGAGGATGTATTGAGGAAACAGAAAAAATTGATTGATGTCCAGTGGACATTTGGATTGTGCTACTGATTAGTTTTTTAAGTTGTCAAAAGAAGATGCTAGATTCATCATTTTTTATGTGATCACAGCAATATCTTTTTTATATTCTTGGGATGTTGTTCTTTTTAATGCCTCAATCGGAGCATTTTATATTAAGCTTTTTGTAGCTATTTTCTTTATTTAGTCTCGACCAATTGGAGAGGTTTCGTAATTGCTTCTTGATAGAACGGGTGCATTATCTACCATATATTGTATTCCATTTTTGATAATTGAAGGTAGATATATAGTTCCATGTGTCTCACTATTTGTCTTTTTTCATTCTCTTTTTATTTTATGATAGATACTATGAAGTTCTTTTTAAATTTCAGTTTCAAATTTACACAAGACATTCACTTCTTGTGATATATTAATTTTTGTGTCATTGTTCAGGCTACGATCGGTATTGATTTTCTCTCAAAGACTATGTATCTTGAAGATCGCACTGTCCGACTACAGTTGTGGTAAGGTTTATTACATTTTACAGCTCATAAATAGGTGACAACTTTCTATTACTAATTCACACGACATTACTTTTCTACAAGAATTATCATTAAATCACATTTTCTCTTGTATTTTGAGCATGATTTGTCCCAAATAATTAATGAACTTACATGATTTCTTGAGACTGGTGTATAAATAATAGATTTCAACAATATAAGCTTTATGCAAACAATTCAATATGGCTATTCCTCCTAAATTAAAACTGTTCTCTTTTGACACTTAAAAATGAATTGCGAGGTGCAGTTCCTTCCTTCAGGAGGGAATGGAAAAGTTCTGGATTTGGAATTCCTTTTTGGAGGAGAATTCTAAATAAAAAATATTGAACTTTAATGCTGTTCCTGTCTTTAGAGGTGGGAGGCTCACCCTGGCACTATCAATTTTCTAACCTTGTTTGTAGTTTTCTGAATAAAATGGTTAGAAATTTGGCAATATAAATTATGAATTTATTTTGGGAGGGATCAAATGGGAAAGGGAGGGGACAGCCACCTTATTAGACGAAACACGTCTCTCTTCTTCTGCTGAATCAAGGTCTAAATATTCGGAACACCAGCCATAAAATTATTGCCCTTCTTTGTATATGGTTGTGGAGGTTTTGTAGGGATCCTAGTTCTTGATGGATAAGAAACTATATGTTTGAAAATATGAAATTTCAAAAGAACGGTAGGGGAGGAAAGCCTTAATCGAGGCCAAGGAAGTTTTGGAAAGAGTCTTCCAATTAGCACAAAGGGAAGAAATTATATAGTTAAAAAGGAAGAAAAACCATAGTTACCGAAAGAGTAAAAAGCTTGGACAATCTGCATCAGAGCAACGCCCAAAAACATTATGAACCCACAAAGAGTCCAAATAAAAGCTCCAATAAAATTCATCCAAAAAGAGCAATTCTCATTCCCCAAGAGCAATTGCACAGCTCACCCTGTCTTTATACAATTCTCTAAGTTCCATCTGAAAAAAATGATACTTAGTTTGAGTTAACAGGTTATGGGAGAATGTCAGCATGAATAGTTCTCTCTTCTGCGAGGAATCAAAGTGGGAGGTGTATAACTATAAGGTTGCTGAAACTTTTAGTAGCAAGCTGGATTATATCATTTCTCTCTCGATGTCTCTCCCTTTCAGGTGCCTTTTATGTTGATTTTCTCTTTTAAGTGTTCATCATGAGACAAGCCCCCATCTACCAGAATCTATGCAAAAGGACTTGGAAATCCAAACTCCTTATACTGTGCAAGGTGTTTCCATGTGCTATCTATCTCCAAGGGGGTAATACAAATGTTGTCCAAAGAAGGAATCATTTCTACAGTGTTTACTTTATCAGTCAGACACAGACCGAATGGGGAGTCATTTCACTAGATGGTTAAGTGGATTTTTTTTCATCTTTTTAACTTTAGCTGTGCTTGGTTGAAAAGTCTTCATTATCATCCTTTCTCTCTGAACATAGCCAATTGGAGAGCCTTTTTTCTAATTCCTGGCCTTTGTTCGTTTCGTGCCTTTCTATATGCTCTTTCCTCTCACACTAAAGGTTGAAAGTAGATACAGAAGAACTCTCATGGAATTTATAAAAAATGGAGAATAATTATAAAAGACTTTAGAAAACTAGACAAGGAACTTATTAGCTTCTAAGGAAACTTTATCTAGAAGCTAGGTAACAAGCAGTATCCAATAAATCTCTCTCTGCCATTTCTACATTTTCCATGAAATAAAAAACAATGTGCTCGTAAAATTTCATCCTTTGGTTGCTGAGTAAGCATGCACGTCTTGTAGAATAATGAATTAATTTTGACTTTTGTGCCACATATATTTATTTATGGTACTTTTAATTTCATTTAAATGAAAGAACCAACTTTCTTCCATTTGTCTCCCCCAGAGGAATGGGTTTTGCTGTACCTTTTTAGGTTTTATATTACTTTGTTTATCAGGGACACTGCTGGACAGGAAAGATTCAGAAGTCTAATACCCAGCTATATCAGGGACTCATCCGTCGCTGTCATTGTTTATGATGTTGCAAGTATGGAATCTGAAACACATTTTAAAATCTCCCCAGTTGCAATTCATATGCGTACTTTCTATAGCATTTGCGCAATGAGAATAATTCGGCCAACCACTTAGTAAATGTCTATTCTTTCCATGTGGATTTGCCATGATTGATGTTGTGGTAAAATGTTCCATATGGGTGTACGTGGGTTCTGATATCCAGGCCTTTTAGGTTCACAATCTCGTACAGTTGCTAGATTGCATGCTGCTTAGTTATTTCTGCGCCATGATGTGCTTAAAGGATTATTTTTAACTGTCTTCCTCCTTCTGCTACTTAGGCCGGCAGACTTTTCTAAACACTTCAAAATGGATTGAGGAGGTGCGCACTGAGAGGGGAAGTGATGTCATTATAGTGCTTGTTGGAAACAAAACCGACCTCGTGGAGAAGAGGTACTAGTTGATCATGGAATTTACTTTTCGCAATTCATTTCTTTTTTGTTCGCACATTTCATCTTTCTTCTTTTCTCTTTCTTAATACTCCATGTGAGTATACTCTGGAACCCGTTTTTAATTAGTTGTGTTGGAAAGTAAGGATGTTTGAAAAAATATATATAGTTTGTTGTTGACCACTCATTTTGCAATATGATTTCTGAATATAGCTTCGAAAACAAATAAAGCTTTGAATTTCATATAGCTGAACACGGAACTTGGATGAGGGGTAAGATTAATTTAGTTTAAATGTGTTATGCTCGCGAAATGTATACAATATATTAGTTAATGAAAATAGAAGAACAAACAAATTTTTATGAAGTAAAAATAGCAAGAAATGATTTTTAAAATTTTAGTATGAACAGTTCTAAATTTATAAGAAATACTTCTAAATAGCTCCTGCTGATATAATATCAGCGCTCTAGGCTAATAAGTAATTATGTGTCTTTATTATATAATCTTATGTTTATATTATATGTGATGTGTGGTGAAAGAGTAAATATCGTGTTTATATTGTACATGATGTTGTGATCTACCGCTGTGCTTGCTCATATATTTTTGAATGGGAAGTAAGGTTTAAATTCCCAAGAAGTTTAGTCCTGTTTAGCCTATTGTTTCATCATCTTCTCGTATCCATGATTCCCAGGCAAGTCTCTATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCAAAAGCTGGATTCAATATTAAGGTAAACCAATATGACATTTTATCCAAACTCTTATACCTCGACCTCCAGGTTGATCTGTATCAATTGAGCTTTCTCATCTGCTGTATACTTAGGAACCCTATTCTTTTTTCTTTTTTTGTAATCGGGGTTCGAACCTCCAACTTTTAAGCAAGTACTTGAGCTATCTTCGTGTTAGTAAATACTTAGGAACTTGACACGTATGCTTCAGAATCCTTCTTTCTTTGGACAAAATTTACGTTAAATTTTAGAAAAGCCGTGATTTTCTTTGTATTCATTTCTGGTCTTTCTGATGACCAAACCTATTAATTGTGCAGGCACTTTTTAGGAAAATTGCTGCAGCGTTGCCGGGAATGGAAACTCTCTCTTCAACAAAACAAGAAGACATGGTTGATGTTAACCTGAAGTCCTCCGGCAGTGGCGCTGCACAGTCCCAGCCGCAGTCCGGTGGATGCGCCTGC

mRNA sequence

ATGGCACCAGTGTCAGCTCTCGCGAAGTATAAGCTGGTCTTTCTCGGAGACCAGTCTGTTGGGAAAACCAGCATCATCACACGCTTCATGTACGACAAATTCGACAATACGTATCAGGCTACGATCGGTATTGATTTTCTCTCAAAGACTATGTATCTTGAAGATCGCACTGTCCGACTACAGTTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTCTAATACCCAGCTATATCAGGGACTCATCCGTCGCTGTCATTGTTTATGATGTTGCAAGCCGGCAGACTTTTCTAAACACTTCAAAATGGATTGAGGAGGTGCGCACTGAGAGGGGAAGTGATGTCATTATAGTGCTTGTTGGAAACAAAACCGACCTCGTGGAGAAGAGGCAAGTCTCTATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCAAAAGCTGGATTCAATATTAAGGCACTTTTTAGGAAAATTGCTGCAGCGTTGCCGGGAATGGAAACTCTCTCTTCAACAAAACAAGAAGACATGGTTGATGTTAACCTGAAGTCCTCCGGCAGTGGCGCTGCACAGTCCCAGCCGCAGTCCGGTGGATGCGCCTGC

Coding sequence (CDS)

ATGGCACCAGTGTCAGCTCTCGCGAAGTATAAGCTGGTCTTTCTCGGAGACCAGTCTGTTGGGAAAACCAGCATCATCACACGCTTCATGTACGACAAATTCGACAATACGTATCAGGCTACGATCGGTATTGATTTTCTCTCAAAGACTATGTATCTTGAAGATCGCACTGTCCGACTACAGTTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTCTAATACCCAGCTATATCAGGGACTCATCCGTCGCTGTCATTGTTTATGATGTTGCAAGCCGGCAGACTTTTCTAAACACTTCAAAATGGATTGAGGAGGTGCGCACTGAGAGGGGAAGTGATGTCATTATAGTGCTTGTTGGAAACAAAACCGACCTCGTGGAGAAGAGGCAAGTCTCTATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCAAAAGCTGGATTCAATATTAAGGCACTTTTTAGGAAAATTGCTGCAGCGTTGCCGGGAATGGAAACTCTCTCTTCAACAAAACAAGAAGACATGGTTGATGTTAACCTGAAGTCCTCCGGCAGTGGCGCTGCACAGTCCCAGCCGCAGTCCGGTGGATGCGCCTGC

Protein sequence

MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSGSGAAQSQPQSGGCAC

Homology

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BLAST of MS005424 vs. NCBI nr
Match: XP_022159735.1 (ras-related protein RABH1b [Momordica charantia])

HSP 1 Score: 397.9 bits (1021), Expect = 5.4e-107
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKSSGSGAAQSQPQSGGCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

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BLAST of MS005424 vs. NCBI nr
Match: XP_038889006.1 (ras-related protein RABH1b [Benincasa hispida])

HSP 1 Score: 395.2 bits (1014), Expect = 3.5e-106
Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKS+GSGAAQSQPQSGGCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

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BLAST of MS005424 vs. NCBI nr
Match: XP_022958673.1 (ras-related protein RABH1b [Cucurbita moschata] >XP_023533385.1 ras-related protein RABH1b [Cucurbita pepo subsp. pepo] >KAG6606223.1 Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394.8 bits (1013), Expect = 4.6e-106
Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKSSGSGAAQSQPQSGGCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of MS005424 vs. NCBI nr
Match: KAG7036170.1 (Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.8 bits (1013), Expect = 4.6e-106
Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 45  MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 104

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 105 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 164

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 165 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 224

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKSSGSGAAQSQPQSGGCAC
Sbjct: 225 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 252

[Close]

BLAST of MS005424 vs. NCBI nr
Match: XP_022996115.1 (ras-related protein RABH1b [Cucurbita maxima])

HSP 1 Score: 393.7 bits (1010), Expect = 1.0e-105
Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKS+GSGAAQSQPQSGGCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

[Close]

BLAST of MS005424 vs. ExPASy Swiss-Prot
Match: O80501 (Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 4.9e-103
Identity = 194/208 (93.27%), Postives = 203/208 (97.60%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQ+FLNT+KWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEE EAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKSS + A+ +Q QSGGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

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BLAST of MS005424 vs. ExPASy Swiss-Prot
Match: Q9LFT9 (Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.2e-96
Identity = 186/208 (89.42%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNTSKWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEEG+ KAR+  V+FIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLK+S S +AQ + Q GGCAC
Sbjct: 181 QEDMVDVNLKTS-SNSAQGEQQRGGCAC 207

[Close]

BLAST of MS005424 vs. ExPASy Swiss-Prot
Match: Q9SID8 (Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.5e-91
Identity = 176/208 (84.62%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+R +FLNTSKWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEG++K RE  VMFIETSAKAGFNIK LFRKIAAALPGME+ S+TK
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
            EDMVDVNLK + S ++Q   Q G C+C
Sbjct: 181 NEDMVDVNLKPT-SNSSQGDQQGGACSC 207

[Close]

BLAST of MS005424 vs. ExPASy Swiss-Prot
Match: Q9SMR4 (Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.3e-84
Identity = 169/215 (78.60%), Postives = 188/215 (87.44%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA VS LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA++VYDV++RQTFLNTSKWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLS-S 180
           VGNKTDLVEKRQVSI EGE K +E  VMFIETSAK  FNIKALFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 TKQEDMVDVNLKSSGSGAAQSQPQ-----SGGCAC 209
           TK +DMVDVNLK++ S ++Q + Q      GGC+C
Sbjct: 181 TKSDDMVDVNLKTT-SNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of MS005424 vs. ExPASy Swiss-Prot
Match: P20340 (Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-81
Identity = 153/203 (75.37%), Postives = 177/203 (87.19%), Query Frame = 0


Query: 7   LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
           L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 11  LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70

Query: 67  GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDL 126
           GQERFRSLIPSYIRDS+VAV+VYD+ +  +F  T+KWI++VRTERGSDVII+LVGNKTDL
Sbjct: 71  GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 130

Query: 127 VEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVD 186
            +KRQVSIEEGE KA+ELNVMFIETSAKAG+N+K LFR++AAALPGME+     +EDM+D
Sbjct: 131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMID 190

Query: 187 VNLKSSGSGAAQSQPQS-GGCAC 209
           + L+       Q QP S GGC+C
Sbjct: 191 IKLEK-----PQEQPVSEGGCSC 208

[Close]

BLAST of MS005424 vs. ExPASy TrEMBL
Match: A0A6J1DZL5 (ras-related protein RABH1b OS=Momordica charantia OX=3673 GN=LOC111026075 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.6e-107
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKSSGSGAAQSQPQSGGCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of MS005424 vs. ExPASy TrEMBL
Match: A0A6J1H3Q8 (ras-related protein RABH1b OS=Cucurbita moschata OX=3662 GN=LOC111459827 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106
Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKSSGSGAAQSQPQSGGCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of MS005424 vs. ExPASy TrEMBL
Match: A0A6J1K5U1 (ras-related protein RABH1b OS=Cucurbita maxima OX=3661 GN=LOC111491433 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.9e-106
Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKS+GSGAAQSQPQSGGCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

[Close]

BLAST of MS005424 vs. ExPASy TrEMBL
Match: A0A5A7TB19 (Ras-related protein RABH1b-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004050 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.4e-106
Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKS+GSGAAQSQPQS GCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of MS005424 vs. ExPASy TrEMBL
Match: A0A0A0LI95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910690 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.4e-106
Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKS+GSGAAQSQPQS GCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of MS005424 vs. TAIR 10
Match: AT2G44610.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 375.2 bits (962), Expect = 3.5e-104
Identity = 194/208 (93.27%), Postives = 203/208 (97.60%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQ+FLNT+KWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEE EAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLKSS + A+ +Q QSGGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of MS005424 vs. TAIR 10
Match: AT5G10260.1 (RAB GTPase homolog H1E )

HSP 1 Score: 354.0 bits (907), Expect = 8.3e-98
Identity = 186/208 (89.42%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNTSKWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEEG+ KAR+  V+FIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
           QEDMVDVNLK+S S +AQ + Q GGCAC
Sbjct: 181 QEDMVDVNLKTS-SNSAQGEQQRGGCAC 207

[Close]

BLAST of MS005424 vs. TAIR 10
Match: AT2G22290.1 (RAB GTPase homolog H1D )

HSP 1 Score: 336.3 bits (861), Expect = 1.8e-92
Identity = 176/208 (84.62%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+R +FLNTSKWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEG++K RE  VMFIETSAKAGFNIK LFRKIAAALPGME+ S+TK
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 209
            EDMVDVNLK + S ++Q   Q G C+C
Sbjct: 181 NEDMVDVNLKPT-SNSSQGDQQGGACSC 207

[Close]

BLAST of MS005424 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 313.2 bits (801), Expect = 1.6e-85
Identity = 169/215 (78.60%), Postives = 188/215 (87.44%), Query Frame = 0


Query: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA VS LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA++VYDV++RQTFLNTSKWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLS-S 180
           VGNKTDLVEKRQVSI EGE K +E  VMFIETSAK  FNIKALFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 TKQEDMVDVNLKSSGSGAAQSQPQ-----SGGCAC 209
           TK +DMVDVNLK++ S ++Q + Q      GGC+C
Sbjct: 181 TKSDDMVDVNLKTT-SNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of MS005424 vs. TAIR 10
Match: AT5G64990.1 (RAB GTPase homolog H1A )

HSP 1 Score: 287.3 bits (734), Expect = 9.5e-78
Identity = 151/199 (75.88%), Postives = 165/199 (82.91%), Query Frame = 0


Query: 10  YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
           YKLVFLGDQ VGKTSIIT FMY KFD +YQATIGIDFLSKT   EDRT RLQLWDTAGQE
Sbjct: 8   YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQE 67

Query: 70  RFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEK 129
           RF+SL+PSYIRDSSVAVIVYDVAS+Q+F+NTSKWIEEVR ERGS VIIVLVGNKTDLV K
Sbjct: 68  RFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNK 127

Query: 130 RQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNL 189
           RQVSIEEGE KARE   +F+ETSAKAGFNIK LF KI +AL G E +S TKQED+VDVNL
Sbjct: 128 RQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQEDLVDVNL 187

Query: 190 KSSGSGAAQSQPQSGGCAC 209
           K     +  +  Q   C+C
Sbjct: 188 KPLMFSSQANHQQESNCSC 206

The following BLAST results are available for this feature:

BLAST of MS005424 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159735.1	5.4e-107	100.00	ras-related protein RABH1b [Momordica charantia]	[more]
XP_038889006.1	3.5e-106	99.04	ras-related protein RABH1b [Benincasa hispida]	[more]
XP_022958673.1	4.6e-106	98.56	ras-related protein RABH1b [Cucurbita moschata] >XP_023533385.1 ras-related prot...	[more]
KAG7036170.1	4.6e-106	98.56	Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022996115.1	1.0e-105	98.08	ras-related protein RABH1b [Cucurbita maxima]	[more]

BLAST of MS005424 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80501	4.9e-103	93.27	Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1	[more]
Q9LFT9	1.2e-96	89.42	Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1	[more]
Q9SID8	2.5e-91	84.62	Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1	[more]
Q9SMR4	2.3e-84	78.60	Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1	[more]
P20340	1.8e-81	75.37	Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3	[more]

BLAST of MS005424 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZL5	2.6e-107	100.00	ras-related protein RABH1b OS=Momordica charantia OX=3673 GN=LOC111026075 PE=4 S...	[more]
A0A6J1H3Q8	2.2e-106	98.56	ras-related protein RABH1b OS=Cucurbita moschata OX=3662 GN=LOC111459827 PE=4 SV...	[more]
A0A6J1K5U1	4.9e-106	98.08	ras-related protein RABH1b OS=Cucurbita maxima OX=3661 GN=LOC111491433 PE=4 SV=1	[more]
A0A5A7TB19	8.4e-106	98.56	Ras-related protein RABH1b-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LI95	8.4e-106	98.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910690 PE=4 SV=1	[more]

BLAST of MS005424 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44610.1	3.5e-104	93.27	Ras-related small GTP-binding family protein	[more]
AT5G10260.1	8.3e-98	89.42	RAB GTPase homolog H1E	[more]
AT2G22290.1	1.8e-92	84.62	RAB GTPase homolog H1D	[more]
AT4G39890.1	1.6e-85	78.60	RAB GTPase homolog H1C	[more]
AT5G64990.1	9.5e-78	75.88	RAB GTPase homolog H1A	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 113..126 score: 53.75 coord: 10..31 score: 41.61 coord: 33..49 score: 33.83 coord: 51..73 score: 48.05 coord: 148..170 score: 36.17
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 15..208 e-value: 7.6E-9 score: 45.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 7..173 e-value: 1.4E-34 score: 130.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 10..173 e-value: 5.7E-87 score: 304.9
None	No IPR available	PANTHER	PTHR24073:SF1132	GTP-BINDING PROTEIN RAB6	coord: 1..208
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..208
None	No IPR available	PROSITE	PS51420	RHO	coord: 3..176 score: 10.390684
None	No IPR available	PROSITE	PS51419	RAB	coord: 5..208 score: 31.427464
None	No IPR available	CDD	cd01861	Rab6	coord: 10..170 e-value: 1.15382E-116 score: 326.887
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 12..172 e-value: 3.5E-14 score: 61.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 11..169 e-value: 1.0E-57 score: 194.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..208 score: 17.922747
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 9..166 e-value: 2.9E-27 score: 93.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..202 e-value: 1.7E-66 score: 225.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005424.1	MS005424.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding