MS005421 (gene) Bitter gourd (TR) v1

Overview


Name	MS005421
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome c oxidase subunit 6B
Location	scaffold641: 79558 .. 80249 (-)
RNA-Seq Expression	MS005421
Synteny	MS005421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCGGCTCAGATGGATCCTCACGATCAGATGAGATCCAGAGACATCAGCAAGGTGGCTCGAGGCGAGCAAGCCCCAAGGCCTGCCCACGAATATGGCACCGTTTCGAAGCCGCCGCCGCCTCAGTCCTCCTCCGGTGCCGCTCCGCCCGGCCAGACCAACCCCACTGACGTGGATCAGAACCGCACCGGCGAAGACAGCCACAAGGTCTTCTTCTTTCTCTCTCCTCCTACAGGAAAACTGCTACGACGTCGTAGAGTTTCTAATGTTTTAAATTTTAGCCATATTTTTATTAACCCTCTAAAAAGAAAAGTGTTTCTAGGAAGAAAAATGTTTTTGAAATCTGAAATAACTTTAAAGTAGAATCATTCTAAAGCCCTTTTTTTTTTGGTTTACCTTAAACTTGTCATATTATGGTTTTTTTGTTTTTTTTTTTTTTAATTTTTAGGAAGCCACTCCCTTGAGAGTAAGAAAGCACTCTGAAGATGGAGGGAAGCTTTTAATTATTATAATAAATCATAAATTAAGCAGTTATATAATGTGAGAATTAATGGGGGAGAACTTGCATATTATGAGTGATTTTTGGCTGTTGATTTAGGTGCGTGCAGAAGAAGGGGGAACACGTGCCTGAATGCCAAATGTTGGTCCAGTATTACGCATCTCTATGTCCTGCTGAATGGGTAAGACAA

mRNA sequence

ATGTCGGCGGCTCAGATGGATCCTCACGATCAGATGAGATCCAGAGACATCAGCAAGGTGGCTCGAGGCGAGCAAGCCCCAAGGCCTGCCCACGAATATGGCACCGTTTCGAAGCCGCCGCCGCCTCAGTCCTCCTCCGGTGCCGCTCCGCCCGGCCAGACCAACCCCACTGACGTGGATCAGAACCGCACCGGCGAAGACAGCCACAAGGTCTTCTTCTTTCTCTCTCCTCCTACAGGAAAACTGCTACGACGTCGTAGAGTTTCTAATGTTTTAAATTTTAGCCATATTTTTATTAACCCTCTAAAAAGAAAAGTGTGCGTGCAGAAGAAGGGGGAACACGTGCCTGAATGCCAAATGTTGGTCCAGTATTACGCATCTCTATGTCCTGCTGAATGGGTAAGACAA

Coding sequence (CDS)

ATGTCGGCGGCTCAGATGGATCCTCACGATCAGATGAGATCCAGAGACATCAGCAAGGTGGCTCGAGGCGAGCAAGCCCCAAGGCCTGCCCACGAATATGGCACCGTTTCGAAGCCGCCGCCGCCTCAGTCCTCCTCCGGTGCCGCTCCGCCCGGCCAGACCAACCCCACTGACGTGGATCAGAACCGCACCGGCGAAGACAGCCACAAGGTCTTCTTCTTTCTCTCTCCTCCTACAGGAAAACTGCTACGACGTCGTAGAGTTTCTAATGTTTTAAATTTTAGCCATATTTTTATTAACCCTCTAAAAAGAAAAGTGTGCGTGCAGAAGAAGGGGGAACACGTGCCTGAATGCCAAATGTTGGTCCAGTATTACGCATCTCTATGTCCTGCTGAATGGGTAAGACAA

Protein sequence

MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTNPTDVDQNRTGEDSHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVPECQMLVQYYASLCPAEWVRQ

Homology

[Close]

BLAST of MS005421 vs. NCBI nr
Match: XP_031737980.1 (putative cytochrome c oxidase subunit 6b-like isoform X1 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 2.1e-27
Identity = 77/138 (55.80%), Postives = 88/138 (63.77%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTN--PTD 60
           MSA+Q+DPHD+MRSRD+SKVARGEQAPRPAHEYGTVSKPPPP SSS   P  QTN    D
Sbjct: 1   MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSS--VPSAQTNLDGND 60

Query: 61  VDQNRTGED-SHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVPE 120
            D+ R  ED  +KV   +    G      R        H +   L+   CVQKKGEH PE
Sbjct: 61  DDRRRGSEDRDNKV--VMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPE 120

Query: 121 CQMLVQYYASLCPAEWVR 136
           C+   +YY SLCP EWVR
Sbjct: 121 CKKFAKYYRSLCPGEWVR 134

[Close]

BLAST of MS005421 vs. NCBI nr
Match: XP_038886888.1 (putative cytochrome c oxidase subunit 6b-like [Benincasa hispida])

HSP 1 Score: 132.9 bits (333), Expect = 2.1e-27
Identity = 75/138 (54.35%), Postives = 86/138 (62.32%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTN--PTD 60
           MSAAQ+DPHD+MRSRDISKV RGEQAPRPAHEYGTVSKPPPP SSS   P  QTN    D
Sbjct: 1   MSAAQVDPHDKMRSRDISKVTRGEQAPRPAHEYGTVSKPPPPSSSS--VPSAQTNLDGND 60

Query: 61  VDQNRTGEDSHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVPEC 120
            D+ R GED+      L      L    R        H +   L+   CVQK+GEH PEC
Sbjct: 61  DDRRRGGEDTDNKDEGLETAPNDL----RFPFTNQTRHCYARYLEYHRCVQKEGEHAPEC 120

Query: 121 QMLVQYYASLCPAEWVRQ 137
           +   +YY SLCP EW+ +
Sbjct: 121 KKFAKYYRSLCPGEWIEK 132

[Close]

BLAST of MS005421 vs. NCBI nr
Match: XP_031737981.1 (cytochrome c oxidase subunit 6B isoform X2 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 6.1e-27
Identity = 76/139 (54.68%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTN--PTD 60
           MSA+Q+DPHD+MRSRD+SKVARGEQAPRPAHEYGTVSKPPPP SSS   P  QTN    D
Sbjct: 1   MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSS--VPSAQTNLDGND 60

Query: 61  VDQNRTGED-SHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVPE 120
            D+ R  ED  +KV   +    G      R        H +   L+   CVQKKGEH PE
Sbjct: 61  DDRRRGSEDRDNKV--VMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPE 120

Query: 121 CQMLVQYYASLCPAEWVRQ 137
           C+   +YY SLCP EWV +
Sbjct: 121 CKKFAKYYRSLCPGEWVEK 135

[Close]

BLAST of MS005421 vs. NCBI nr
Match: XP_008465918.1 (PREDICTED: putative cytochrome c oxidase subunit 6b-like [Cucumis melo] >KAA0038526.1 putative cytochrome c oxidase subunit 6b-like [Cucumis melo var. makuwa] >TYK31123.1 putative cytochrome c oxidase subunit 6b-like [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 3.0e-26
Identity = 74/140 (52.86%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTNPTDVD 60
           MSA+Q+DPHD+MRSRD+SKVARGEQAPRPAHEYGTVSKPPPP S+S   P  QTN    D
Sbjct: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS--VPSAQTND---D 60

Query: 61  QNRTGED----SHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVP 120
             R+G +     +KV       T     R   +N     H +   L+   CVQKKGEH P
Sbjct: 61  HRRSGSEDKDKDNKVVMDEGVETAPSDLRFPFTN--QTRHCYARYLEYHRCVQKKGEHAP 120

Query: 121 ECQMLVQYYASLCPAEWVRQ 137
           EC+    YY SLCP EWV +
Sbjct: 121 ECKKFANYYRSLCPGEWVEK 133

[Close]

BLAST of MS005421 vs. NCBI nr
Match: GAU38205.1 (hypothetical protein TSUD_226270 [Trifolium subterraneum])

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-22
Identity = 63/136 (46.32%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTNPTDVD 60
           MS AQMDPHD+MR+RD+SKVARGEQAPRPAHE+GTVS PPPP S++ A     TN    +
Sbjct: 1   MSGAQMDPHDKMRARDVSKVARGEQAPRPAHEFGTVSPPPPPSSTNNALHT-TTNNNKGE 60

Query: 61  QNRTGEDSHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVPECQM 120
           + RTGE+  +     SP +   +R           H +   ++ + C+QKKGE  PECQ 
Sbjct: 61  KARTGENGVE-----SPSSDYQIR-----------HCYTKYVEYQRCIQKKGEKAPECQK 119

Query: 121 LVQYYASLCPAEWVRQ 137
           +  ++ S+CP EW+ +
Sbjct: 121 ISTHFRSMCPTEWITE 119

[Close]

BLAST of MS005421 vs. ExPASy Swiss-Prot
Match: Q9LPJ2 (Putative cytochrome c oxidase subunit 6b-like OS=Arabidopsis thaliana OX=3702 GN=At1g32710 PE=3 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-14
Identity = 53/134 (39.55%), Postives = 67/134 (50.00%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTNPTDVD 60
           MS+AQMDPHD+MRSRDISKVARG+QAPRPAH  GTVS PP  +++  A        TD  
Sbjct: 1   MSSAQMDPHDKMRSRDISKVARGQQAPRPAHTPGTVSPPPENEATFRAKRGDSGRETD-- 60

Query: 61  QNRTGEDSHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVPECQM 120
                                +  R  V+N     H F   ++   C++K G    +C  
Sbjct: 61  -------------------AAVEERFPVTN--ETRHCFNRFMQYHKCIEKNGRDANDCNN 111

Query: 121 LVQYYASLCPAEWV 135
           L  Y  S+CP E V
Sbjct: 121 LRDYVRSICPEELV 111

[Close]

BLAST of MS005421 vs. ExPASy Swiss-Prot
Match: Q9S7L9 (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 9.9e-04
Identity = 17/39 (43.59%), Postives = 23/39 (58.97%), Query Frame = 0


Query: 96  HIFINPLKRKVCVQKKGEHVPECQMLVQYYASLCPAEWV 135
           H F   ++   CV  KG+  PEC    ++Y SLCP+EWV
Sbjct: 136 HCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWV 174

[Close]

BLAST of MS005421 vs. ExPASy TrEMBL
Match: A0A0A0LEH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910720 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 3.0e-27
Identity = 76/139 (54.68%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTN--PTD 60
           MSA+Q+DPHD+MRSRD+SKVARGEQAPRPAHEYGTVSKPPPP SSS   P  QTN    D
Sbjct: 1   MSASQIDPHDKMRSRDMSKVARGEQAPRPAHEYGTVSKPPPPSSSS--VPSAQTNLDGND 60

Query: 61  VDQNRTGED-SHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVPE 120
            D+ R  ED  +KV   +    G      R        H +   L+   CVQKKGEH PE
Sbjct: 61  DDRRRGSEDRDNKV--VMDEGVGTAPSDIRFPFTNQTRHCYARYLEYHRCVQKKGEHAPE 120

Query: 121 CQMLVQYYASLCPAEWVRQ 137
           C+   +YY SLCP EWV +
Sbjct: 121 CKKFAKYYRSLCPGEWVEK 135

[Close]

BLAST of MS005421 vs. ExPASy TrEMBL
Match: A0A5D3E4S8 (Putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004020 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26
Identity = 74/140 (52.86%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTNPTDVD 60
           MSA+Q+DPHD+MRSRD+SKVARGEQAPRPAHEYGTVSKPPPP S+S   P  QTN    D
Sbjct: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS--VPSAQTND---D 60

Query: 61  QNRTGED----SHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVP 120
             R+G +     +KV       T     R   +N     H +   L+   CVQKKGEH P
Sbjct: 61  HRRSGSEDKDKDNKVVMDEGVETAPSDLRFPFTN--QTRHCYARYLEYHRCVQKKGEHAP 120

Query: 121 ECQMLVQYYASLCPAEWVRQ 137
           EC+    YY SLCP EWV +
Sbjct: 121 ECKKFANYYRSLCPGEWVEK 133

[Close]

BLAST of MS005421 vs. ExPASy TrEMBL
Match: A0A1S3CQ05 (putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo OX=3656 GN=LOC103503497 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26
Identity = 74/140 (52.86%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTNPTDVD 60
           MSA+Q+DPHD+MRSRD+SKVARGEQAPRPAHEYGTVSKPPPP S+S   P  QTN    D
Sbjct: 1   MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS--VPSAQTND---D 60

Query: 61  QNRTGED----SHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVP 120
             R+G +     +KV       T     R   +N     H +   L+   CVQKKGEH P
Sbjct: 61  HRRSGSEDKDKDNKVVMDEGVETAPSDLRFPFTN--QTRHCYARYLEYHRCVQKKGEHAP 120

Query: 121 ECQMLVQYYASLCPAEWVRQ 137
           EC+    YY SLCP EWV +
Sbjct: 121 ECKKFANYYRSLCPGEWVEK 133

[Close]

BLAST of MS005421 vs. ExPASy TrEMBL
Match: A0A2Z6NQQ0 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_226270 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 9.9e-23
Identity = 63/136 (46.32%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTNPTDVD 60
           MS AQMDPHD+MR+RD+SKVARGEQAPRPAHE+GTVS PPPP S++ A     TN    +
Sbjct: 1   MSGAQMDPHDKMRARDVSKVARGEQAPRPAHEFGTVSPPPPPSSTNNALHT-TTNNNKGE 60

Query: 61  QNRTGEDSHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVPECQM 120
           + RTGE+  +     SP +   +R           H +   ++ + C+QKKGE  PECQ 
Sbjct: 61  KARTGENGVE-----SPSSDYQIR-----------HCYTKYVEYQRCIQKKGEKAPECQK 119

Query: 121 LVQYYASLCPAEWVRQ 137
           +  ++ S+CP EW+ +
Sbjct: 121 ISTHFRSMCPTEWITE 119

[Close]

BLAST of MS005421 vs. ExPASy TrEMBL
Match: V7CH48 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G003400g PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.2e-20
Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTNPTDVD 60
           MSAAQ+DPHD+MR+RD++KVARG+QAPRPAH+YGTVS PPPP S+     PG TN     
Sbjct: 1   MSAAQVDPHDKMRARDVNKVARGQQAPRPAHQYGTVSPPPPPSSTH---TPGDTN----- 60

Query: 61  QNRTGEDSHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVPECQM 120
            N+ G+        +S    +L      S+     H +   ++   C+Q+KGE  PECQ 
Sbjct: 61  -NKEGKSD------ISEKGAELAE----SSDYKTRHCYAKYVEYHRCIQQKGETAPECQK 117

Query: 121 LVQYYASLCPAEWVRQ 137
           L  Y+ S CP+EW+ +
Sbjct: 121 LGTYFRSSCPSEWITE 117

[Close]

BLAST of MS005421 vs. TAIR 10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 78.6 bits (192), Expect = 4.4e-15
Identity = 53/134 (39.55%), Postives = 67/134 (50.00%), Query Frame = 0


Query: 1   MSAAQMDPHDQMRSRDISKVARGEQAPRPAHEYGTVSKPPPPQSSSGAAPPGQTNPTDVD 60
           MS+AQMDPHD+MRSRDISKVARG+QAPRPAH  GTVS PP  +++  A        TD  
Sbjct: 1   MSSAQMDPHDKMRSRDISKVARGQQAPRPAHTPGTVSPPPENEATFRAKRGDSGRETD-- 60

Query: 61  QNRTGEDSHKVFFFLSPPTGKLLRRRRVSNVLNFSHIFINPLKRKVCVQKKGEHVPECQM 120
                                +  R  V+N     H F   ++   C++K G    +C  
Sbjct: 61  -------------------AAVEERFPVTN--ETRHCFNRFMQYHKCIEKNGRDANDCNN 111

Query: 121 LVQYYASLCPAEWV 135
           L  Y  S+CP E V
Sbjct: 121 LRDYVRSICPEELV 111

[Close]

BLAST of MS005421 vs. TAIR 10
Match: AT1G22450.1 (cytochrome C oxidase 6B )

HSP 1 Score: 44.7 bits (104), Expect = 7.0e-05
Identity = 17/39 (43.59%), Postives = 23/39 (58.97%), Query Frame = 0


Query: 96  HIFINPLKRKVCVQKKGEHVPECQMLVQYYASLCPAEWV 135
           H F   ++   CV  KG+  PEC    ++Y SLCP+EWV
Sbjct: 136 HCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWV 174

The following BLAST results are available for this feature:

BLAST of MS005421 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737980.1	2.1e-27	55.80	putative cytochrome c oxidase subunit 6b-like isoform X1 [Cucumis sativus]	[more]
XP_038886888.1	2.1e-27	54.35	putative cytochrome c oxidase subunit 6b-like [Benincasa hispida]	[more]
XP_031737981.1	6.1e-27	54.68	cytochrome c oxidase subunit 6B isoform X2 [Cucumis sativus]	[more]
XP_008465918.1	3.0e-26	52.86	PREDICTED: putative cytochrome c oxidase subunit 6b-like [Cucumis melo] >KAA0038...	[more]
GAU38205.1	2.0e-22	46.32	hypothetical protein TSUD_226270 [Trifolium subterraneum]	[more]

BLAST of MS005421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPJ2	6.2e-14	39.55	Putative cytochrome c oxidase subunit 6b-like OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9S7L9	9.9e-04	43.59	Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=...	[more]

BLAST of MS005421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEH8	3.0e-27	54.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910720 PE=4 SV=1	[more]
A0A5D3E4S8	1.5e-26	52.86	Putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3CQ05	1.5e-26	52.86	putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A2Z6NQQ0	9.9e-23	46.32	Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_226270 PE=4 SV...	[more]
V7CH48	1.2e-20	44.85	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G003400g PE=4 ...	[more]

BLAST of MS005421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32710.1	4.4e-15	39.55	Cytochrome c oxidase, subunit Vib family protein	[more]
AT1G22450.1	7.0e-05	43.59	cytochrome C oxidase 6B	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036549	Cytochrome c oxidase, subunit VIb superfamily	GENE3D	1.10.10.140	Cytochrome c oxidase, subunit VIb	coord: 99..136 e-value: 1.4E-5 score: 26.9
IPR036549	Cytochrome c oxidase, subunit VIb superfamily	SUPERFAMILY	47694	Cytochrome c oxidase subunit h	coord: 107..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	PANTHER	PTHR46281	CYTOCHROME C OXIDASE SUBUNIT 6B	coord: 1..135
None	No IPR available	PANTHER	PTHR46281:SF17	CYTOCHROME C OXIDASE SUBUNIT 6B-3-LIKE	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005421.1	MS005421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045277	respiratory chain complex IV