MS005292 (gene) Bitter gourd (TR) v1

Overview


Name	MS005292
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Auxin-responsive protein
Location	scaffold83: 620966 .. 624414 (-)
RNA-Seq Expression	MS005292
Synteny	MS005292

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCGGAGCGCGGTGAGGAGTACAGAGGGATGATGATCAATTTCGAGCAGACGGAGCTCCGGCTCGGATTGCCCGGCGGCGGTGGCGGAAGCGACGACGGCGAAATCCTCGCCGGAAAAAGTGGTTCTGCGAAGAGAGGATTTCTGGAAACTGTGGATTTGAAGCTTAATTTGTCTTCTTCAATGGGGGCCGTGAAGGAGGAGGCCACCAAATTAGAACACAAGACTTCTGCAAAACCTCCATCCAAGTAAATTTCTCTCTCTATAAAATTAATTAATCTGAGAATTGGGCATTGGAAAATAGGTAATTAATTACCAAAATTGGATTTTTCTTAATACAACTAGTGGAAGTGGTGGGACCGGATATATATCAAGTCATGGTTGAACTGTGCTCGTTTTTTACTATCACCGAATTTGAATTATTAAAATAGAATTAGGATTAAATGAATGATTAAAACCATATTGGATGATTTTTCTTTTTCTTGTATGGTTAACTATTTTAAACCGATTAAGGGTTTTTATTTCAGGTTCTCGATTCTTTTTAAATTTTATTTTATTTTGATCTTAAACTTTTGAAAGCATTCAATAATCGTTTGCTAATATAAATACTTATTTGTTTGTTAGTTAAATAAAAGTAAAATAAGGATCAGAATGTTTATTGTTTTTTAAATCAAAGCCTAGTTAACAATTTTGTAAGTTCACATGTCAAAATTAATGTTACAAAAGTTCAAGAATCAAAATAAAATATATCTAAAAGTTTCGTTACCAAAATTGAAGTGGAACATTATAATGGTAGAAATGCATAAAGAAAATGTCGTAAGACCTCTACTTAAATATCGTAAATATGTATGAACAATTTAGGATATGAACAAAATGTTTAAAAGCACGGAATAGAAAAGTTTTGAATTTAAACTTTATTACATTCCAACAACATTTTTCACAATGGAGATTAAAATGTACAAATTCTTAATTACAAAAACTAAATTGTTATATACTACGGTCTAGATACAAAAAATTGATTTTTAACCTTTCATATGAATTCATTTTTTTCTTGAACTTTTGCATATTTGAATAAATAAGAGCGTTATTTTTTGTTTATATCCATATCAAAAATTCTAATTTTTACATATTATTGATATCAAATATTAGTGACCGTTCTTCATGGCTTATAGATTTCAAATCTCATTCTCCTTATTTTTTTACCAAACATTTTCATGCTTTATTTTCACTTTACCTTTTTAAAAAAGTAAAAGATGGTTAATATTTAAATAATGAAAATTGAAGAGAATTATTAATTATGATGATTCATGAGGACTTTTTGGGAATACGAGTGTAAGTTAAGCTGACCTTGAAACAAAGTTTTCAGTATTTTCAATGGTTTGGTTGATTGGTTGTCGGGAAAATGAAGGAAAATTACAAAACATCAGGAATCTCACTTTTCTCACCAACCAAACAATTCTTAAAGTATAACAAAAAGATGCACACTCCAAAAATAGAAATAGTTTTTAAGTATTTACTTTTTTTTTTAATTCAATAAGAATATATAACTTGATTTAAGTAATAAACAGAATAAAGAAAAATTATTGATTGCTTTGCTTCTGCAAACCATCATTTCTTTGAAGGAAAAAAAAAAGAGAGAGGTTTTAAATCATATTTCGTTCTTTTCACACTTTTTTATTTTAGTTCCAAAACTTTTAAATAATATTTTATTTAATCATATAAAAAATTTATTCTGGTCCTTGCATTATTTGTTCACATAAATTGCAACTTGATTTAATAAACCAATCAATTTGATTCTAATTTAATTATTTTATATTTCCGTTAAGTTTTAAAGATATTTGAGAGAAAAATGGTAGATTTTGAAAATAATGGGGGGTTTTCCTCAATTTAAAAATCAATAATTTTATTATGTAGTTAAGTAAAAATTTGGGTTAATATTATTTTTTTTTGTTTGATGAATTATTTATAGAGCCCAAGTAGTGGGTTGGCCACCGGTGAGATCATCAAGGAAAAATTTGGTAGCGCAGAGGAACGGCGGCGACGAAGGCGGCGGCGCGTCGTTCGTAAAAGTCAGCATGGACGGCGCGCCTTATTTACGGAAGGTGGACTTGAAACTATACAGCAGCTACAAGGATCTTTCTCACGCGCTTGCCAAAATGTTTAGCTCTTTCACCATTGGTAATTTCTTTCTGTCCTATTTTCTTTTAATTTCTAAAATGGATTTTTAGTAAATTAATTAATCGCCTAATTATTCTTTTTTTTTGTGGGTAATTAAGAAAATTTGAAGAGGGTTCTAAACCCAACTTTTGAAAAAAGTTTATAATTATAGGTATTTTGATCGTTAGAGAATTCGTGTGATCCACCAGAAAGTTGAGATTTTGTTAATGAAACTTTCACTAATACATTCCTTATTTGATATAAAACACAGGTTTAAATACTATTTTGGTATTGTGCTCACAAAACGTTCATTTTGGTGTTTATACTTTTGAATTTTGTTCACTTAAAATCCTTAGGCTTTCAATGGTTCACGTACTTTTAAAAATCTAGTGATCTCAATTTATATTGGTAGCCCTGTTTACAAAATTTTATAGAAATCATTTAATACAAATTTATGGCTACATTTCAAATTTAGTGAGTAAAGTGTGATGTTAAAATTTTGATCGAAATAAATGAGATAAAAATGAAAATTAAAGAATTAAAATGATGATCATTTTTTAAAAATACATGGAACAAAATGAATGTTTTGAGAGTACACAAAAACTAAAATAAATAAAAGTTGAAAATATAAAGACAAATATAAATATTTTGAAAGCATATAGACTAAAATGGAAAAAAATAAATGCAAAAACTATAACATGAGTACTAAAGGTTTATAATTACCTTATACATATACTCTAAAAATTGAGATGAAGGCAGGAAAATGGATGGGTTTTAATGGGAAAATTTTGGTGTTTGGATGGCAGGAAAGTGCGACTCAGAAGGAATAATGAAGGATTTCATGAACCAAACAAAATTGGCAGACCTTTTGAATAGCTCTGAATACGTACCCACTTATGAAGACAAAGATGGAGATTGGATGCTTGTAGGCGATGTGCCATGGGAGTAAGCTCTCTCTCTCTTTAATTTAAATCACGAGGACGTTGACTCGTGATTTTAATAACTCGTGATTTTAATAACGCTCTATACAACCAAATACATTATAGTTGTGCTTAGTTGGTGCATTTCATGATTTGTAAAAGTTAGTATGAAGTATACGTATTCACTATTTTATATCGTCTCGTTAATTATTTGACAGGATGTTTGTTGATTCATGCAAACGTTTGAGGATCATGAAAGGGTCTGAAGCCATTGGACTTGGTAAATCATCCATCTCTAATTCTTTGTTAAAATTTTTAATGAGGTTTAAAGAAGGAGAGAAACTAATTAACAATGAGCTTCTGTTAATA

mRNA sequence

ATGGAATCGGAGCGCGGTGAGGAGTACAGAGGGATGATGATCAATTTCGAGCAGACGGAGCTCCGGCTCGGATTGCCCGGCGGCGGTGGCGGAAGCGACGACGGCGAAATCCTCGCCGGAAAAAGTGGTTCTGCGAAGAGAGGATTTCTGGAAACTGTGGATTTGAAGCTTAATTTGTCTTCTTCAATGGGGGCCGTGAAGGAGGAGGCCACCAAATTAGAACACAAGACTTCTGCAAAACCTCCATCCAAAGCCCAAGTAGTGGGTTGGCCACCGGTGAGATCATCAAGGAAAAATTTGGTAGCGCAGAGGAACGGCGGCGACGAAGGCGGCGGCGCGTCGTTCGTAAAAGTCAGCATGGACGGCGCGCCTTATTTACGGAAGGTGGACTTGAAACTATACAGCAGCTACAAGGATCTTTCTCACGCGCTTGCCAAAATGTTTAGCTCTTTCACCATTGGAAAGTGCGACTCAGAAGGAATAATGAAGGATTTCATGAACCAAACAAAATTGGCAGACCTTTTGAATAGCTCTGAATACGTACCCACTTATGAAGACAAAGATGGAGATTGGATGCTTGTAGGCGATGTGCCATGGGAGATGTTTGTTGATTCATGCAAACGTTTGAGGATCATGAAAGGGTCTGAAGCCATTGGACTTGGTAAATCATCCATCTCTAATTCTTTGTTAAAATTTTTAATGAGGTTTAAAGAAGGAGAGAAACTAATTAACAATGAGCTTCTGTTAATA

Coding sequence (CDS)

ATGGAATCGGAGCGCGGTGAGGAGTACAGAGGGATGATGATCAATTTCGAGCAGACGGAGCTCCGGCTCGGATTGCCCGGCGGCGGTGGCGGAAGCGACGACGGCGAAATCCTCGCCGGAAAAAGTGGTTCTGCGAAGAGAGGATTTCTGGAAACTGTGGATTTGAAGCTTAATTTGTCTTCTTCAATGGGGGCCGTGAAGGAGGAGGCCACCAAATTAGAACACAAGACTTCTGCAAAACCTCCATCCAAAGCCCAAGTAGTGGGTTGGCCACCGGTGAGATCATCAAGGAAAAATTTGGTAGCGCAGAGGAACGGCGGCGACGAAGGCGGCGGCGCGTCGTTCGTAAAAGTCAGCATGGACGGCGCGCCTTATTTACGGAAGGTGGACTTGAAACTATACAGCAGCTACAAGGATCTTTCTCACGCGCTTGCCAAAATGTTTAGCTCTTTCACCATTGGAAAGTGCGACTCAGAAGGAATAATGAAGGATTTCATGAACCAAACAAAATTGGCAGACCTTTTGAATAGCTCTGAATACGTACCCACTTATGAAGACAAAGATGGAGATTGGATGCTTGTAGGCGATGTGCCATGGGAGATGTTTGTTGATTCATGCAAACGTTTGAGGATCATGAAAGGGTCTGAAGCCATTGGACTTGGTAAATCATCCATCTCTAATTCTTTGTTAAAATTTTTAATGAGGTTTAAAGAAGGAGAGAAACTAATTAACAATGAGCTTCTGTTAATA

Protein sequence

MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLSSSMGAVKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQRNGGDEGGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQTKLADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSISNSLLKFLMRFKEGEKLINNELLLI

Homology

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BLAST of MS005292 vs. NCBI nr
Match: XP_022143010.1 (auxin-responsive protein IAA16 [Momordica charantia])

HSP 1 Score: 433.0 bits (1112), Expect = 1.8e-117
Identity = 217/225 (96.44%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 1   MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLS 60
           MESERGEEYRG MINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLS
Sbjct: 6   MESERGEEYRGTMINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLS 65

Query: 61  SSMGAVKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQRNGGDEGGGASFVKVSM 120
           SSMG VKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQRNGGDEGGGASFVKVSM
Sbjct: 66  SSMGTVKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQRNGGDEGGGASFVKVSM 125

Query: 121 DGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQTKLADLLNSSEY 180
           DGAPYLRKVDLKLYSSYKDLSHALA+MFSSFTIGKCDSEGIMKDFMNQTKLADLLNSSEY
Sbjct: 126 DGAPYLRKVDLKLYSSYKDLSHALAQMFSSFTIGKCDSEGIMKDFMNQTKLADLLNSSEY 185

Query: 181 VPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSI 226
           VPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL   ++
Sbjct: 186 VPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAV 230

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BLAST of MS005292 vs. NCBI nr
Match: XP_023521167.1 (auxin-responsive protein IAA16-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023547309.1 auxin-responsive protein IAA16-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 346.7 bits (888), Expect = 1.7e-91
Identity = 185/237 (78.06%), Postives = 197/237 (83.12%), Query Frame = 0


Query: 1   MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGS-AKRGFLETVDLKLNL 60
           MESE+ +EYR ++INFEQTELRLGLPGG GG   G    GKS S AKRGF+ETVDLKLNL
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGETSG----GKSSSAAKRGFMETVDLKLNL 60

Query: 61  SSSMGAVKEEATKLEHKTS--------AKPPSKAQVVGWPPVRSSRKNLVAQRNGGDEGG 120
           SSSM   KEEAT LE   S        AKPPSKAQVVGWPPVRSSRKNL AQR GG++GG
Sbjct: 61  SSSMAPEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGEDGG 120

Query: 121 GASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQTKL 180
           GASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIG C+SEG MKDFM++ KL
Sbjct: 121 GASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGTCESEG-MKDFMSERKL 180

Query: 181 ADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSISNS 229
            DLLN SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGL   ++  S
Sbjct: 181 VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKS 232

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BLAST of MS005292 vs. NCBI nr
Match: KAG6599310.1 (Auxin-responsive protein IAA16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343.2 bits (879), Expect = 1.9e-90
Identity = 186/240 (77.50%), Postives = 197/240 (82.08%), Query Frame = 0


Query: 1   MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGS-AKRGFLETVDLKLNL 60
           MESE+ +EYR ++INFEQTELRLGLPGG GG   G    GKS S AKRGF+ETVDLKLNL
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSG----GKSSSAAKRGFMETVDLKLNL 60

Query: 61  SSSMGAVKEEATKLEHKTS--------AKPPSKAQVVGWPPVRSSRKNLVAQRNGGDE-- 120
           SSSM   KEEAT LE   S        AKPPSKAQVVGWPPVRSSRKNL AQR GG++  
Sbjct: 61  SSSMAPEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGEDGG 120

Query: 121 -GGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQ 180
            GGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIG C+SEG MKDFMN+
Sbjct: 121 GGGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGTCESEG-MKDFMNE 180

Query: 181 TKLADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSISNS 229
            KL DLLN SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGL   ++  S
Sbjct: 181 RKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKS 235

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BLAST of MS005292 vs. NCBI nr
Match: XP_023521166.1 (auxin-responsive protein IAA16-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547308.1 auxin-responsive protein IAA16-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.0 bits (876), Expect = 4.2e-90
Identity = 185/238 (77.73%), Postives = 197/238 (82.77%), Query Frame = 0


Query: 1   MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGS-AKRGFLETVDLKLNL 60
           MESE+ +EYR ++INFEQTELRLGLPGG GG   G    GKS S AKRGF+ETVDLKLNL
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGETSG----GKSSSAAKRGFMETVDLKLNL 60

Query: 61  SSSMGAVKEEATKLEHKTS--------AKPPSKAQVVGWPPVRSSRKNLVAQRNGGDEGG 120
           SSSM   KEEAT LE   S        AKPPSKAQVVGWPPVRSSRKNL AQR GG++GG
Sbjct: 61  SSSMAPEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGEDGG 120

Query: 121 GASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTI-GKCDSEGIMKDFMNQTK 180
           GASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTI G C+SEG MKDFM++ K
Sbjct: 121 GASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGGTCESEG-MKDFMSERK 180

Query: 181 LADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSISNS 229
           L DLLN SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGL   ++  S
Sbjct: 181 LVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKS 233

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BLAST of MS005292 vs. NCBI nr
Match: XP_022946129.1 (auxin-responsive protein IAA14-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 339.0 bits (868), Expect = 3.6e-89
Identity = 182/239 (76.15%), Postives = 195/239 (81.59%), Query Frame = 0


Query: 1   MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGS-AKRGFLETVDLKLNL 60
           MESE+ +EYR ++INFEQTELRLGLPGG GG   G    GKS S AKRGF+ETVDLKLNL
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSG----GKSSSAAKRGFMETVDLKLNL 60

Query: 61  SSSMGAVKEEATKLEHKTS--------AKPPSKAQVVGWPPVRSSRKNLVAQRNGGDE-- 120
           SSSM   KEEAT LE   S        AKPPSKAQVVGWPPVRSSRKNL AQR GG++  
Sbjct: 61  SSSMAPEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGEDGG 120

Query: 121 GGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQT 180
           GGG +FVKVSMDGAPYLRKVDLKLY SYKDLSHALAKMFSSFT+G C+SEG MKDFMN+ 
Sbjct: 121 GGGGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEG-MKDFMNER 180

Query: 181 KLADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSISNS 229
           KL DLLN SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGL   ++  S
Sbjct: 181 KLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKS 234

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BLAST of MS005292 vs. ExPASy Swiss-Prot
Match: O24407 (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.6e-69
Identity = 145/235 (61.70%), Postives = 174/235 (74.04%), Query Frame = 0


Query: 13  MINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLSS-SMGAVKEEAT 72
           MINFE TELRLGLPGG  G +    +AGK+ + KRGF ETVDLKLNLSS +M +V +   
Sbjct: 1   MINFEATELRLGLPGGNHGGE----MAGKN-NGKRGFSETVDLKLNLSSTAMDSVSKVDL 60

Query: 73  KLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQR--------NGGDEGGGAS--------- 132
           +   +   KPP+KAQVVGWPPVRS RKN+++ +         G D+  G+S         
Sbjct: 61  ENMKEKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASAC 120

Query: 133 ----FVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQTK 192
               +VKVSMDGAPYLRK+DLKLY +Y+DLS+AL+KMFSSFTIG    +G MKDFMN++K
Sbjct: 121 ATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQG-MKDFMNESK 180

Query: 193 LADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSI 226
           L DLLN S+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMKGSEAIGL   ++
Sbjct: 181 LIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRAL 229

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BLAST of MS005292 vs. ExPASy Swiss-Prot
Match: P13089 (Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.6e-66
Identity = 147/239 (61.51%), Postives = 167/239 (69.87%), Query Frame = 0


Query: 14  INFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLE-----------TVDLKLNLSSS 73
           + FE+TELRLGLPG GG     E+L       KRGF E           TVDL LNLSS 
Sbjct: 1   MGFEETELRLGLPGNGGTE---EVLI-----RKRGFSETETGHEDESATTVDLMLNLSSK 60

Query: 74  MGAVKEEAT---KLEHKT-----------SAKPPSKAQVVGWPPVRSSRKNLVA-QRNGG 133
             A    A      +HKT            AKPP+K QVVGWPPVRS RKN++A Q++ G
Sbjct: 61  EAATTAAAAADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVG 120

Query: 134 DE-----GGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIM 193
           +E        ASFVKVSMDGAPYLRKVDLK+Y SY++LS +L KMFSSFT G C+S+G M
Sbjct: 121 EESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQG-M 180

Query: 194 KDFMNQTKLADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLG 222
           KDFMN++KL DLLNSS+YVPTYEDKDGDWMLVGDVPWEMFV+SCKRLRIMKG EAIGLG
Sbjct: 181 KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLG 230

[Close]

BLAST of MS005292 vs. ExPASy Swiss-Prot
Match: Q38832 (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2)

HSP 1 Score: 252.3 bits (643), Expect = 5.8e-66
Identity = 141/223 (63.23%), Postives = 165/223 (73.99%), Query Frame = 0


Query: 14  INFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLSSSM---------G 73
           +N ++TEL LGLP   GG++  E  A      KRGF ETVDLKLNL S+          G
Sbjct: 1   MNLKETELCLGLP---GGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNG 60

Query: 74  AVKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQRNGGDE-------GGGASFVK 133
           A KE   K   K  +KPP+KAQVVGWPPVR+ RKN++A +  G+        GG  +FVK
Sbjct: 61  APKE---KTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVK 120

Query: 134 VSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQTKLADLLNS 193
           VSMDGAPYLRKVDLK+Y+SYKDLS ALAKMFSSFT+G   ++G M DFMN++K+ DLLNS
Sbjct: 121 VSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQG-MIDFMNESKVMDLLNS 180

Query: 194 SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 221
           SEYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGL
Sbjct: 181 SEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGL 216

[Close]

BLAST of MS005292 vs. ExPASy Swiss-Prot
Match: Q38825 (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.9e-65
Identity = 140/234 (59.83%), Postives = 167/234 (71.37%), Query Frame = 0


Query: 11  GMMINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLSS--------- 70
           G ++N + TEL LGLP   GG++  E  A  +  +KRGF ETVDL LNL S         
Sbjct: 3   GQLMNLKATELCLGLP---GGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLK 62

Query: 71  SMGAVKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQR---------------NG 130
           ++ AV +E T L  K  +KPP+KAQVVGWPPVR+ RKN++ Q+               N 
Sbjct: 63  NVSAVPKEKTTL--KDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNF 122

Query: 131 GDEGGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFM 190
           G    GA  VKVSMDGAPYLRKVDLK+Y SY+DLS ALAKMFSSFT+G   ++G M DFM
Sbjct: 123 GGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQG-MIDFM 182

Query: 191 NQTKLADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 221
           N++KL +LLNSSEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEA+GL
Sbjct: 183 NESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGL 230

[Close]

BLAST of MS005292 vs. ExPASy Swiss-Prot
Match: P0C132 (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.2e-63
Identity = 144/262 (54.96%), Postives = 163/262 (62.21%), Query Frame = 0


Query: 16  FEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLSSSMGAVKEEATKLE- 75
           FE TELRLGLP GGGG  D    A +S S KRGF ET+DLKL L  +  AV ++  K E 
Sbjct: 7   FEATELRLGLP-GGGGDGDAAAAAARSSSGKRGFAETIDLKLKLEPAAAAVDDDDDKEEA 66

Query: 76  --------------HKTSAKPPS-----------------------------KAQVVGWP 135
                             A PP+                             KAQVVGWP
Sbjct: 67  AADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVVGWP 126

Query: 136 PVRSSRKNLVAQR---------NGGDEGG----GASFVKVSMDGAPYLRKVDLKLYSSYK 195
           PVRS RKN++A +          GGD+ G     A+FVKVSMDGAPYLRKVDLK+Y SY 
Sbjct: 127 PVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYL 186

Query: 196 DLSHALAKMFSSFTIGKCDSEGIMKDFMNQTKLADLLNSSEYVPTYEDKDGDWMLVGDVP 221
           +LS AL KMFSSFTIG C S G+  + MN++K+ADLLN SEYVPTYEDKDGDWMLVGDVP
Sbjct: 187 ELSKALEKMFSSFTIGNCGSHGV--NGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDVP 246

[Close]

BLAST of MS005292 vs. ExPASy TrEMBL
Match: A0A6J1CMJ1 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111012999 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 8.8e-118
Identity = 217/225 (96.44%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 1   MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLS 60
           MESERGEEYRG MINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLS
Sbjct: 6   MESERGEEYRGTMINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLS 65

Query: 61  SSMGAVKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQRNGGDEGGGASFVKVSM 120
           SSMG VKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQRNGGDEGGGASFVKVSM
Sbjct: 66  SSMGTVKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQRNGGDEGGGASFVKVSM 125

Query: 121 DGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQTKLADLLNSSEY 180
           DGAPYLRKVDLKLYSSYKDLSHALA+MFSSFTIGKCDSEGIMKDFMNQTKLADLLNSSEY
Sbjct: 126 DGAPYLRKVDLKLYSSYKDLSHALAQMFSSFTIGKCDSEGIMKDFMNQTKLADLLNSSEY 185

Query: 181 VPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSI 226
           VPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL   ++
Sbjct: 186 VPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAV 230

[Close]

BLAST of MS005292 vs. ExPASy TrEMBL
Match: A0A6J1G2X5 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450302 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.7e-89
Identity = 182/239 (76.15%), Postives = 195/239 (81.59%), Query Frame = 0


Query: 1   MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGS-AKRGFLETVDLKLNL 60
           MESE+ +EYR ++INFEQTELRLGLPGG GG   G    GKS S AKRGF+ETVDLKLNL
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSG----GKSSSAAKRGFMETVDLKLNL 60

Query: 61  SSSMGAVKEEATKLEHKTS--------AKPPSKAQVVGWPPVRSSRKNLVAQRNGGDE-- 120
           SSSM   KEEAT LE   S        AKPPSKAQVVGWPPVRSSRKNL AQR GG++  
Sbjct: 61  SSSMAPEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGEDGG 120

Query: 121 GGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQT 180
           GGG +FVKVSMDGAPYLRKVDLKLY SYKDLSHALAKMFSSFT+G C+SEG MKDFMN+ 
Sbjct: 121 GGGGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEG-MKDFMNER 180

Query: 181 KLADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSISNS 229
           KL DLLN SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGL   ++  S
Sbjct: 181 KLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKS 234

[Close]

BLAST of MS005292 vs. ExPASy TrEMBL
Match: A0A6J1G2X6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450302 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 2.3e-89
Identity = 184/235 (78.30%), Postives = 195/235 (82.98%), Query Frame = 0


Query: 1   MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGS-AKRGFLETVDLKLNL 60
           MESE+ +EYR ++INFEQTELRLGLPGG GG   G    GKS S AKRGF+ETVDLKLNL
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSG----GKSSSAAKRGFMETVDLKLNL 60

Query: 61  SSSMGAVKEEATKLEHKTS--------AKPPSKAQVVGWPPVRSSRKNLVAQRNGGDE-- 120
           SSSM   KEEAT LE   S        AKPPSKAQVVGWPPVRSSRKNL AQR GG++  
Sbjct: 61  SSSMAPEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGEDGG 120

Query: 121 GGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTI-GKCDSEGIMKDFMNQ 180
           GGG +FVKVSMDGAPYLRKVDLKLY SYKDLSHALAKMFSSFT+ G C+SEG MKDFMN+
Sbjct: 121 GGGGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGGTCESEG-MKDFMNE 180

Query: 181 TKLADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKS 224
            KL DLLN SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGLGKS
Sbjct: 181 RKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLGKS 230

[Close]

BLAST of MS005292 vs. ExPASy TrEMBL
Match: A0A6J1K9W5 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111493578 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 5.0e-89
Identity = 183/240 (76.25%), Postives = 195/240 (81.25%), Query Frame = 0


Query: 1   MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGS-AKRGFLETVDLKLNL 60
           MESE+ +EYR ++INFEQTELRLGLPGG GG   G    GKS S AKRGF+ETVDLKLNL
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSG----GKSNSAAKRGFMETVDLKLNL 60

Query: 61  SSSMGAVKEEATKLEHKTS--------AKPPSKAQVVGWPPVRSSRKNLVAQRNGGDE-- 120
           SSSM   KEEAT LE   S        AKPPSKAQVVGWPPVRSSRKNL AQR GG++  
Sbjct: 61  SSSMAPEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRAGGEDGG 120

Query: 121 -GGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQ 180
            GGGASFVKVSMDGAPYLRKVDLKLY SYKDLSHALAKMFSSFTIG C+SEG MKDFMN+
Sbjct: 121 GGGGASFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTIGTCESEG-MKDFMNE 180

Query: 181 TKLADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSISNS 229
            KL DLLN S+YVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMK SEAIGL   ++  S
Sbjct: 181 RKLVDLLNGSKYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKESEAIGLAPRTMEKS 235

[Close]

BLAST of MS005292 vs. ExPASy TrEMBL
Match: A0A1S3C1R6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103496046 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.6e-87
Identity = 181/237 (76.37%), Postives = 193/237 (81.43%), Query Frame = 0


Query: 1   MESERGEEYRGMMINFEQTELRLGLPGGGGGSDDGEILAGKSGSA-KRGFLETVDLKLNL 60
           MES + +EY  ++INFEQTELRLGLPGG GG        GKS SA KRGF+ETVDLKLNL
Sbjct: 1   MESGKNDEYSAILINFEQTELRLGLPGGDGGG------GGKSSSAGKRGFMETVDLKLNL 60

Query: 61  SSSMGAVKEEATKLEHKTS--------AKPPSKAQVVGWPPVRSSRKNL--VAQRNGGDE 120
           +SSM + KEE T LE   S        AKPPSK QVVGWPPVRSSRKNL   + R GGDE
Sbjct: 61  ASSMASAKEEGTNLEEIKSCSQQPNDFAKPPSKTQVVGWPPVRSSRKNLGVSSSRKGGDE 120

Query: 121 GGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQT 180
           GGG SFVKVSMDGAPYLRKVDLKLY SYKDLSHALAKMFSSFTIGKC+SEG MKDFMN++
Sbjct: 121 GGG-SFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTIGKCESEG-MKDFMNES 180

Query: 181 KLADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSIS 227
           K  DLLN SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK S+AIGLGKSS S
Sbjct: 181 KSVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLGKSSPS 229

[Close]

BLAST of MS005292 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 262.3 bits (669), Expect = 3.9e-70
Identity = 145/235 (61.70%), Postives = 174/235 (74.04%), Query Frame = 0


Query: 13  MINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLSS-SMGAVKEEAT 72
           MINFE TELRLGLPGG  G +    +AGK+ + KRGF ETVDLKLNLSS +M +V +   
Sbjct: 1   MINFEATELRLGLPGGNHGGE----MAGKN-NGKRGFSETVDLKLNLSSTAMDSVSKVDL 60

Query: 73  KLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQR--------NGGDEGGGAS--------- 132
           +   +   KPP+KAQVVGWPPVRS RKN+++ +         G D+  G+S         
Sbjct: 61  ENMKEKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASAC 120

Query: 133 ----FVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQTK 192
               +VKVSMDGAPYLRK+DLKLY +Y+DLS+AL+KMFSSFTIG    +G MKDFMN++K
Sbjct: 121 ATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQG-MKDFMNESK 180

Query: 193 LADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGKSSI 226
           L DLLN S+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMKGSEAIGL   ++
Sbjct: 181 LIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRAL 229

[Close]

BLAST of MS005292 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 )

HSP 1 Score: 252.3 bits (643), Expect = 4.1e-67
Identity = 141/223 (63.23%), Postives = 165/223 (73.99%), Query Frame = 0


Query: 14  INFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLSSSM---------G 73
           +N ++TEL LGLP   GG++  E  A      KRGF ETVDLKLNL S+          G
Sbjct: 1   MNLKETELCLGLP---GGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNG 60

Query: 74  AVKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQRNGGDE-------GGGASFVK 133
           A KE   K   K  +KPP+KAQVVGWPPVR+ RKN++A +  G+        GG  +FVK
Sbjct: 61  APKE---KTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVK 120

Query: 134 VSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQTKLADLLNS 193
           VSMDGAPYLRKVDLK+Y+SYKDLS ALAKMFSSFT+G   ++G M DFMN++K+ DLLNS
Sbjct: 121 VSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQG-MIDFMNESKVMDLLNS 180

Query: 194 SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 221
           SEYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGL
Sbjct: 181 SEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGL 216

[Close]

BLAST of MS005292 vs. TAIR 10
Match: AT3G23050.1 (indole-3-acetic acid 7 )

HSP 1 Score: 249.2 bits (635), Expect = 3.5e-66
Identity = 140/234 (59.83%), Postives = 167/234 (71.37%), Query Frame = 0


Query: 11  GMMINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLSS--------- 70
           G ++N + TEL LGLP   GG++  E  A  +  +KRGF ETVDL LNL S         
Sbjct: 3   GQLMNLKATELCLGLP---GGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLK 62

Query: 71  SMGAVKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQR---------------NG 130
           ++ AV +E T L  K  +KPP+KAQVVGWPPVR+ RKN++ Q+               N 
Sbjct: 63  NVSAVPKEKTTL--KDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNF 122

Query: 131 GDEGGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFM 190
           G    GA  VKVSMDGAPYLRKVDLK+Y SY+DLS ALAKMFSSFT+G   ++G M DFM
Sbjct: 123 GGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQG-MIDFM 182

Query: 191 NQTKLADLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 221
           N++KL +LLNSSEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEA+GL
Sbjct: 183 NESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGL 230

[Close]

BLAST of MS005292 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 235.3 bits (599), Expect = 5.2e-62
Identity = 132/222 (59.46%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 14  INFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLSSSMGAVKEEATKL 73
           +N  +TEL LGLPG       G+ +A  +G+ KRGF ETVDLKLNL++   A KE +T  
Sbjct: 7   LNLRETELCLGLPG-------GDTVAPVTGN-KRGFSETVDLKLNLNNE-PANKEGSTTH 66

Query: 74  E------------HKTSAKPPSKAQVVGWPPVRSSRKNLVA---QRNGGDEGGGASFVKV 133
           +             K  AKPP+KAQVVGWPPVRS RKN++    + +GG E   A+FVKV
Sbjct: 67  DVVTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPE--AAAFVKV 126

Query: 134 SMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFMNQTKLADLLNSS 193
           SMDGAPYLRK+DL++Y SY +LS+AL+ MFSSFT+GK   E  M DFMN+ KL DL+NS 
Sbjct: 127 SMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSW 186

Query: 194 EYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 221
           +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGL
Sbjct: 187 DYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGL 217

[Close]

BLAST of MS005292 vs. TAIR 10
Match: AT3G23050.2 (indole-3-acetic acid 7 )

HSP 1 Score: 211.8 bits (538), Expect = 6.1e-55
Identity = 122/214 (57.01%), Postives = 147/214 (68.69%), Query Frame = 0


Query: 11  GMMINFEQTELRLGLPGGGGGSDDGEILAGKSGSAKRGFLETVDLKLNLSS--------- 70
           G ++N + TEL LGLP   GG++  E  A  +  +KRGF ETVDL LNL S         
Sbjct: 3   GQLMNLKATELCLGLP---GGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLK 62

Query: 71  SMGAVKEEATKLEHKTSAKPPSKAQVVGWPPVRSSRKNLVAQR---------------NG 130
           ++ AV +E T L  K  +KPP+KAQVVGWPPVR+ RKN++ Q+               N 
Sbjct: 63  NVSAVPKEKTTL--KDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNF 122

Query: 131 GDEGGGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGKCDSEGIMKDFM 190
           G    GA  VKVSMDGAPYLRKVDLK+Y SY+DLS ALAKMFSSFT+G   ++G M DFM
Sbjct: 123 GGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQG-MIDFM 182

Query: 191 NQTKLADLLNSSEYVPTYEDKDGDWMLVGDVPWE 201
           N++KL +LLNSSEYVP+YEDKDGDWMLVGDVPWE
Sbjct: 183 NESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWE 210

The following BLAST results are available for this feature:

BLAST of MS005292 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143010.1	1.8e-117	96.44	auxin-responsive protein IAA16 [Momordica charantia]	[more]
XP_023521167.1	1.7e-91	78.06	auxin-responsive protein IAA16-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_...	[more]
KAG6599310.1	1.9e-90	77.50	Auxin-responsive protein IAA16, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023521166.1	4.2e-90	77.73	auxin-responsive protein IAA16-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_...	[more]
XP_022946129.1	3.6e-89	76.15	auxin-responsive protein IAA14-like isoform X1 [Cucurbita moschata]	[more]

BLAST of MS005292 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24407	5.6e-69	61.70	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=...	[more]
P13089	2.6e-66	61.51	Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1	[more]
Q38832	5.8e-66	63.23	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=...	[more]
Q38825	4.9e-65	59.83	Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1	[more]
P0C132	1.2e-63	54.96	Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30...	[more]

BLAST of MS005292 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMJ1	8.8e-118	96.44	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111012999 PE=3 SV=...	[more]
A0A6J1G2X5	1.7e-89	76.15	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450302 PE=3 SV=1	[more]
A0A6J1G2X6	2.3e-89	78.30	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450302 PE=3 SV=1	[more]
A0A6J1K9W5	5.0e-89	76.25	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111493578 PE=3 SV=1	[more]
A0A1S3C1R6	3.6e-87	76.37	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103496046 PE=3 SV=1	[more]

BLAST of MS005292 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04730.1	3.9e-70	61.70	indoleacetic acid-induced protein 16	[more]
AT4G14550.1	4.1e-67	63.23	indole-3-acetic acid inducible 14	[more]
AT3G23050.1	3.5e-66	59.83	indole-3-acetic acid 7	[more]
AT1G04250.1	5.2e-62	59.46	AUX/IAA transcriptional regulator family protein	[more]
AT3G23050.2	6.1e-55	57.01	indole-3-acetic acid 7	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 42..221 e-value: 2.0E-75 score: 253.7
None	No IPR available	GENE3D	3.10.20.90		coord: 109..227 e-value: 4.2E-44 score: 150.8
None	No IPR available	PANTHER	PTHR31734:SF113	AUXIN-INDUCED PROTEIN AUX28	coord: 6..225
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 111..213
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 6..225
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 113..214 score: 26.04693

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005292.1	MS005292.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding