MS005073 (gene) Bitter gourd (TR) v1

Overview


Name	MS005073
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	double-stranded RNA-binding protein 2
Location	scaffold176: 2471776 .. 2474387 (+)
RNA-Seq Expression	MS005073
Synteny	MS005073

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAAGAACCAGCTCCAAGAGTTGGCCCAGAGGAGTTGCTTCAATCTTCCTTCTTATTCCTCTGTTAGGGAAGGCCCTGACCATGCTCCGAGGTTCAAGGCCTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGCGCCACTCTCCGTCAGGCTGAACACTCCGCGGCCGAGGTTGCTCTCAATTCCCTCGCTAATCGCGGCCCTTCGCACTCGCTCGCCGCTCGGATCCTGGTGCGTATTCTCGCCATTCATCTTTACAATTCAATTCCCGCCGCTATTGTTGCTACTGTTTGTTTGATTTCGCTCTCGTTGTCGTCTTCATCTTTTTTCCCCAATGATCAATCGCTATTGCGTACTTGAATCTAGATGCGTCGTAGAACTTCGCATTACTTTGATTTTTTCCTCTTGAGTTCCCTTTCTCGTTTCCCTAGACAATCTTTAAACCTGTGATCGCTGTCCAAAATCTGATTGGAATTTCGCTATTGTGCGCTGCATAAGTTGATAGTCTTCAATCCTGTAGTATCGAGTTCACAGTATGCGGCGGTGATCGCCTGAACGTTTCGGCTTGCGACCTCTATCGGCCGGAATGGAGTCGGCGATGAAGATAATTTGTTCTGGTCTGGGAGCGAAATTACATTAGTACCCTTACCATCTTTCCTTTTATTATACCTTTCCTTTAATGGCTCAGCAGATTCCCAACGCAGTTGTTTTTTTCTGACGAAGCCGACGACTGTAGCCCTTAAATTCGATGAACAGAGGATATTTTAGGAAACTTTCTGACGGAAGCCCTTAAGATCGCTGGATAACTGGGTTTGTTTTGTCGTTATCGATATCACTGCTGGACCAGTTGCGTACGGGTTTCTTTAGGGGGATGGTTGGTGATATTAAATTTGCTTGATGCAGGGTACTCAGTTGCCGAAATTTTAGTTTTGCAGCTTAAATTACTGAAAATTAGAGTGGAAGTAAATGAAGAAGTTAATTCTTAACTTGTCCAAGTGGCTATTTTGTTCTTCTTTTGGCAAGAACATGGCTCGAGCTTGTCAAACAGTATACAAACTGAGGGCTGTCGAAGTATATCTATGATACCGATTCTGCAGAGAGTAGTTTTGTCTTGCTCTCTTGCTGTACATCTTTGCTTCCAAAATGTACTTTCATACATGTAATATAGGCAAATTGTTGGTCTTTTTTCTGAACGCTAGATCAGAATTTTTGGTTTAGTGACTAAACAACATCATAATGGTCAGGATGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAAAGAGTCGGGGCTCCATTGCCGCAATACACAACAGTCCGGTCGGGACTTGGCCATCTGCCTGTTTTTACTGGGTCGATAGAATTGGCTGGAATCACCTTCACTGGGGAACCTGCCAAGAACAAAAAGCAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCATCTTTAAAACAATGTGAGTTTATTTTTCTAATTTTTGTTTCTGAAAAATATAAGTCCATCACAGAAGATCATGTAGCTAGCAGAACCTTGGTGTGAATGCGAATATACGGTAGCTTGGGTATTGGTGAACAAGATAAAGTTACATATTTGCCATTTTCTATGACAGCCCTCATCACCCAGATTCAATATTTTAAGCAGTCTTTAAGATTTTTAATCACCCATTGTACTTTAATTTGAGTATGATTTCATAATGTATTTGAAAGAAGACGTTGACATCGGGTGCTCATTAGTATATCTTAACTGTCCTTAAGCACGTGGATAACGTAGTAACCCTGTTTTCTCTATCCAGTGGCAAAAGAAGCGGCGAGTTCATCAGAAGCTGAAAGCAGTGATGACCCGGAGCAAGTTGTGATAGCTCGGGCATTATTGAATTATCGTTTAATGGAGAAGATGTTCAGGACTAACCCGAATGCTCCAATGCCATTCCCAAAAAAGCTTTCATTTCAAAGTCCAAGGGCAGCTAGTCCACAACCTCCCCCTGCAACCACATCGAAAATTCTTCCTTTCATTTGCAAAAAGCCGGTTCCTCGAAGCAGACTACCACCAACAGAAAACAACAGCCCTGCGCTACCTTCACAGCCTCCTACAGCATGTGGGAGTCATCCTCAGAAGTTCCCTGCACCAGGAGCAGTTCCTTATGTTCCAATTCGACATTATAGGATGCCCTGTCGGGGAATCGTACCACCTGTGACTATAAGGACTGCTGTGCCTGTTTACACTGCACCGCCATTCCCACAACCACCCAAGGTACCCTCACAGATGCGAGCTGCCCCACCCATTCGAATGGCCCCACCGGTTTTGATTCGGCAAGCTATTCCAGTTTTTGCAACTCCTCCACCATTTACCAGAAAAGAACTCCCTGCTCTTCACAAAGGAGATTCACTCACTGTCCTTAAAGAAGATCCTCCAACCATTGCAACAGAGGATTCTGCTGATACCCTGAAAGCATCAGATCATTCAGCTGCTTCCGCTTCCGCCCCAGTCTCACTTGCAGCATCTTCTAATCAAGCACAGGAAACTCAGAACACAAATGCAATCAATTTGGACGAGACCGAAACAGTTCAGAATCTGAAACAACTCAAAATT

mRNA sequence

ATGTACAAGAACCAGCTCCAAGAGTTGGCCCAGAGGAGTTGCTTCAATCTTCCTTCTTATTCCTCTGTTAGGGAAGGCCCTGACCATGCTCCGAGGTTCAAGGCCTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGCGCCACTCTCCGTCAGGCTGAACACTCCGCGGCCGAGGTTGCTCTCAATTCCCTCGCTAATCGCGGCCCTTCGCACTCGCTCGCCGCTCGGATCCTGGATGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAAAGAGTCGGGGCTCCATTGCCGCAATACACAACAGTCCGGTCGGGACTTGGCCATCTGCCTGTTTTTACTGGGTCGATAGAATTGGCTGGAATCACCTTCACTGGGGAACCTGCCAAGAACAAAAAGCAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCATCTTTAAAACAATTGGCAAAAGAAGCGGCGAGTTCATCAGAAGCTGAAAGCAGTGATGACCCGGAGCAAGTTGTGATAGCTCGGGCATTATTGAATTATCGTTTAATGGAGAAGATGTTCAGGACTAACCCGAATGCTCCAATGCCATTCCCAAAAAAGCTTTCATTTCAAAGTCCAAGGGCAGCTAGTCCACAACCTCCCCCTGCAACCACATCGAAAATTCTTCCTTTCATTTGCAAAAAGCCGGTTCCTCGAAGCAGACTACCACCAACAGAAAACAACAGCCCTGCGCTACCTTCACAGCCTCCTACAGCATGTGGGAGTCATCCTCAGAAGTTCCCTGCACCAGGAGCAGTTCCTTATGTTCCAATTCGACATTATAGGATGCCCTGTCGGGGAATCGTACCACCTGTGACTATAAGGACTGCTGTGCCTGTTTACACTGCACCGCCATTCCCACAACCACCCAAGGTACCCTCACAGATGCGAGCTGCCCCACCCATTCGAATGGCCCCACCGGTTTTGATTCGGCAAGCTATTCCAGTTTTTGCAACTCCTCCACCATTTACCAGAAAAGAACTCCCTGCTCTTCACAAAGGAGATTCACTCACTGTCCTTAAAGAAGATCCTCCAACCATTGCAACAGAGGATTCTGCTGATACCCTGAAAGCATCAGATCATTCAGCTGCTTCCGCTTCCGCCCCAGTCTCACTTGCAGCATCTTCTAATCAAGCACAGGAAACTCAGAACACAAATGCAATCAATTTGGACGAGACCGAAACAGTTCAGAATCTGAAACAACTCAAAATT

Coding sequence (CDS)

ATGTACAAGAACCAGCTCCAAGAGTTGGCCCAGAGGAGTTGCTTCAATCTTCCTTCTTATTCCTCTGTTAGGGAAGGCCCTGACCATGCTCCGAGGTTCAAGGCCTCCGTTAACTTTAACGGCGAGATCTTCGAAAGCCCTAACCATTGCGCCACTCTCCGTCAGGCTGAACACTCCGCGGCCGAGGTTGCTCTCAATTCCCTCGCTAATCGCGGCCCTTCGCACTCGCTCGCCGCTCGGATCCTGGATGAGACAGGGGTTTACAAGAACCTCTTGCAGGAAATTGCCCAAAGAGTCGGGGCTCCATTGCCGCAATACACAACAGTCCGGTCGGGACTTGGCCATCTGCCTGTTTTTACTGGGTCGATAGAATTGGCTGGAATCACCTTCACTGGGGAACCTGCCAAGAACAAAAAGCAGGCAGAGAAGAATGCAGCCTTGGCAGCTTGGTCATCTTTAAAACAATTGGCAAAAGAAGCGGCGAGTTCATCAGAAGCTGAAAGCAGTGATGACCCGGAGCAAGTTGTGATAGCTCGGGCATTATTGAATTATCGTTTAATGGAGAAGATGTTCAGGACTAACCCGAATGCTCCAATGCCATTCCCAAAAAAGCTTTCATTTCAAAGTCCAAGGGCAGCTAGTCCACAACCTCCCCCTGCAACCACATCGAAAATTCTTCCTTTCATTTGCAAAAAGCCGGTTCCTCGAAGCAGACTACCACCAACAGAAAACAACAGCCCTGCGCTACCTTCACAGCCTCCTACAGCATGTGGGAGTCATCCTCAGAAGTTCCCTGCACCAGGAGCAGTTCCTTATGTTCCAATTCGACATTATAGGATGCCCTGTCGGGGAATCGTACCACCTGTGACTATAAGGACTGCTGTGCCTGTTTACACTGCACCGCCATTCCCACAACCACCCAAGGTACCCTCACAGATGCGAGCTGCCCCACCCATTCGAATGGCCCCACCGGTTTTGATTCGGCAAGCTATTCCAGTTTTTGCAACTCCTCCACCATTTACCAGAAAAGAACTCCCTGCTCTTCACAAAGGAGATTCACTCACTGTCCTTAAAGAAGATCCTCCAACCATTGCAACAGAGGATTCTGCTGATACCCTGAAAGCATCAGATCATTCAGCTGCTTCCGCTTCCGCCCCAGTCTCACTTGCAGCATCTTCTAATCAAGCACAGGAAACTCAGAACACAAATGCAATCAATTTGGACGAGACCGAAACAGTTCAGAATCTGAAACAACTCAAAATT

Protein sequence

MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSAAEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFTGSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARALLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLPPTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTAPPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKEDPPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLKI

Homology

[Close]

BLAST of MS005073 vs. NCBI nr
Match: XP_022140798.1 (double-stranded RNA-binding protein 2 [Momordica charantia])

HSP 1 Score: 802.0 bits (2070), Expect = 2.5e-228
Identity = 419/421 (99.52%), Postives = 420/421 (99.76%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP
Sbjct: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
           PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVY+A
Sbjct: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYSA 300

Query: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360
           PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED
Sbjct: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360

Query: 361 PPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK 420
           PPTIATEDSADTLKASDHSA SASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK
Sbjct: 361 PPTIATEDSADTLKASDHSATSASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK 420

Query: 421 I 422
           I
Sbjct: 421 I 421

[Close]

BLAST of MS005073 vs. NCBI nr
Match: KAG7035466.1 (Double-stranded RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 675.2 bits (1741), Expect = 3.5e-190
Identity = 361/421 (85.75%), Postives = 377/421 (89.55%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHC TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSE ESSD+PEQV+IARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           LLNYRL EKMF+TNPN PMPFPKKLSFQSPRA SPQPPPATTSKILPFICKKP+ RSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
           PTE NSP LPS P TA GSHPQKFPAPGAVPYVPIR YRMPCRGIVPPVTIRTAVPVY A
Sbjct: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360
           PPF QPP   SQ+R +  IR+APPV +RQAIPVFA PPP +RKE  ALHKGDSLTV K+D
Sbjct: 301 PPFTQPPNAHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKEFSALHKGDSLTVHKQD 360

Query: 361 PPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK 420
           P T   E SA+T KA DHSA  AS PV L  +SNQ  ETQ+ NA +LDET+TVQ+LKQLK
Sbjct: 361 PSTTTVEGSANTSKA-DHSA--ASGPVLLTTTSNQVPETQSPNATSLDETKTVQHLKQLK 418

Query: 421 I 422
           I
Sbjct: 421 I 418

[Close]

BLAST of MS005073 vs. NCBI nr
Match: KAG6605550.1 (Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 673.7 bits (1737), Expect = 1.0e-189
Identity = 360/421 (85.51%), Postives = 376/421 (89.31%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHC TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSE ESSD+PEQV+IAR 
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARV 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           LLNYRL EKMF+TNPN PMPFPKKLSFQSPRA SPQPPPATTSKILPFICKKP+ RSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
           PTE NSP LPS P TA GSHPQKFPAPGAVPYVPIR YRMPCRGIVPPVTIRTAVPVY A
Sbjct: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360
           PPF QPP   SQ+R +  IR+APPV +RQAIPVFA PPP +RKE  ALHKGDSLTV K+D
Sbjct: 301 PPFTQPPNAHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKEFSALHKGDSLTVHKQD 360

Query: 361 PPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK 420
           P T   E SA+T KA DHSA  AS PV L  +SNQ  ETQ+ NA +LDET+TVQ+LKQLK
Sbjct: 361 PSTTTVEGSANTSKA-DHSA--ASGPVLLTTTSNQVPETQSPNATSLDETKTVQHLKQLK 418

Query: 421 I 422
           I
Sbjct: 421 I 418

[Close]

BLAST of MS005073 vs. NCBI nr
Match: XP_023534429.1 (double-stranded RNA-binding protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 672.9 bits (1735), Expect = 1.8e-189
Identity = 359/421 (85.27%), Postives = 377/421 (89.55%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHC TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSE ES+D+PEQV+IARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESNDEPEQVMIARA 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           LLNYRL EKMF+TNPN PMPFPKKLSFQSPRA SPQPPPATTSKILPFICK+P+ RSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKRPISRSRLP 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
           PTE NSP LPS P TA GSHPQKFPAPGAVPYVPIR YRMPCRGIVPPVTIRTAVPVY A
Sbjct: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360
           PPF QPP V SQ+R +  IR+ PPV +RQAIPVFA PPP +RKE  ALHKGDSLTV K+D
Sbjct: 301 PPFAQPPNVHSQVRTSQHIRIVPPVSVRQAIPVFAAPPPLSRKEFSALHKGDSLTVHKQD 360

Query: 361 PPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK 420
           P T   E SA+T KA DHSA  AS PV L  +SNQ  ETQ+ NA +LDET+TVQ+LKQLK
Sbjct: 361 PSTTTVEGSANTSKA-DHSA--ASGPVLLTTTSNQVPETQSPNATSLDETKTVQHLKQLK 418

Query: 421 I 422
           I
Sbjct: 421 I 418

[Close]

BLAST of MS005073 vs. NCBI nr
Match: XP_022958714.1 (double-stranded RNA-binding protein 2-like [Cucurbita moschata])

HSP 1 Score: 671.8 bits (1732), Expect = 3.9e-189
Identity = 360/421 (85.51%), Postives = 376/421 (89.31%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHC TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSE ESSD+PEQV+IARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           LLNYRL EKMF+TNPN PMPFPKKLSFQSPRA SPQPPPATTSKILPFICKKP+ RSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
           PTE NSP LPS P TA GSHPQKFPAPGAVPYVPIR YRMPCRGIVPPVTIRTAVPVY A
Sbjct: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360
           PPF QPP V  Q+R +  IR+APPV +RQAIPVFA  PP +RKE  ALHKGDSLTV K+D
Sbjct: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360

Query: 361 PPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK 420
           P T   E SA+T KA DHSA  AS PV L  +SNQ  ETQ+ NA +LDET+TVQ+LKQLK
Sbjct: 361 PSTTTVEGSANTSKA-DHSA--ASGPVLLTTTSNQVPETQSPNATSLDETKTVQHLKQLK 418

Query: 421 I 422
           I
Sbjct: 421 I 418

[Close]

BLAST of MS005073 vs. ExPASy Swiss-Prot
Match: Q9SKN2 (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE=1 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.2e-117
Identity = 254/436 (58.26%), Postives = 303/436 (69.50%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP +C+TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN+L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLP+YTT RSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASS-SEAESSDDPEQVVIAR 180
           G++ELAGITFTG+PAKNKKQAEKNAA+AAWSSLKQLAKE +SS  E E+ D+ EQV+IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRLMEKM-FRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKP---VP 240
           AL+NYR+ E +   ++ +AP+PF KK   Q+ R  SPQP PATTS+ILPFIC K      
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 RSRLPPTENNSPALPSQPPTACGSHP-QKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTA 300
           RS L  T      + +   +     P Q+F  P   PYVP+R +R  C G+ PPVTIRTA
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP---PYVPMRQFRSQCHGMAPPVTIRTA 300

Query: 301 VPVYTAPPFPQPP-----------KVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFT-- 360
           VPV++APP P PP            VPS MR APP+R+APPV IR A+PVFA+ PP    
Sbjct: 301 VPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIR 360

Query: 361 ----------RKELPALHKGDSLTVLKEDPPTIATEDSADTLKASDHSAASASAPVSLAA 408
                        + ++ + +S+ VL  D   I  E S  T+   + +A+  +       
Sbjct: 361 TAVKPTVEAGETRISSVQEKESIPVL-PDSLEIGVEGSTITITDCEKTASKETERAEFKD 420

[Close]

BLAST of MS005073 vs. ExPASy Swiss-Prot
Match: Q9AV50 (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.5e-106
Identity = 222/342 (64.91%), Postives = 256/342 (74.85%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLP+Y+ +REGPDHAPRFKA+VNFNGE FESP    TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL +LA RGPS+SLAARILDETGVYKNLLQE+AQRVGAPLP YTT RSGLGHLPVFT
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAK-EAASSSEAESSDDPEQVVIAR 180
            ++ELAGITFTG+PAKNKKQAEKNAA AAWSSL+QL + EA+SS+E ES+D+ EQ+ IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLNYRLMEKMFRTNPNAPMPFPKKLSFQ-SPRAASPQPPPATTSKILPFICKKPVPRSR 240
           ALLNYRL EKM   N     PFPKK   Q   R A PQ   ++ SKILP    K   RSR
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSR 240

Query: 241 LPPTENNSPALPSQP--PTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVP 300
            P +   S A    P  PT   +   +FPA  A PYVP+ H+RMPC  + PPVT+RT++P
Sbjct: 241 -PESPAASDAASQTPFRPTESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTVRTSIP 300

Query: 301 VYTAPPFPQP----PKVPSQMRAAPPIRMAPPVLIRQAIPVF 335
           V++APP P P     ++P  M   PPIRMA PV IR A P+F
Sbjct: 301 VFSAPPLPPPGARTQQLPPLMSHPPPIRMASPVRIRPAPPLF 341

[Close]

BLAST of MS005073 vs. ExPASy Swiss-Prot
Match: Q8GY79 (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.4e-64
Identity = 164/355 (46.20%), Postives = 210/355 (59.15%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKASVNFNGEIFESP +C+TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEV+LN L++R PS SL A+ILDETG+YKNLLQE A R G  LP YT+VRSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
            ++ELAG+TFTGE AK KKQAEKNAA+AAWSSLK++      SS     ++ EQ  +AR 
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM------SSLDSQDEEKEQEAVARV 180

Query: 181 LLNYRLMEKMFRTNPN-----------------APMPFPKKLSFQSPRAAS--------- 240
           L  ++  E   R   N                   + +   L+ Q+  ++S         
Sbjct: 181 LSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHKN 240

Query: 241 -------PQPPPATTSKILPFICKKPVPRSRLPPTEN-----NSPALPSQPPTACGSHPQ 300
                  P PPP  +SKILPFI +     S+   TE      NS A  ++  T      +
Sbjct: 241 SSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLS---K 300

Query: 301 KFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA-PPFPQPPKVPSQMRAA 317
           + P      Y  +    +    + P V +R+ +PV+ A PP P P   PS + ++
Sbjct: 301 QMPFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPPPKPNPNLNPSSLSSS 346

[Close]

BLAST of MS005073 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.8e-62
Identity = 178/394 (45.18%), Postives = 217/394 (55.08%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGE FESP  C+TLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN L+ RGPS SLAA++LDETG+YKNLLQE A R G  LP YTT+RSG GH PVFT
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEA----ESSDDPEQVV 180
            ++ELAG+TFTG P K KKQA+KNAA+AAWS LKQL +    SS +       DD EQ++
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

Query: 181 IARALLNYRLMEKMFRTN-PNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVP 240
           +AR L +      + +TN    P    K+ S   P +  P  P +  S       +K   
Sbjct: 181 VARTLAS------LNQTNGGKTPQQKEKQQSSNRPSSRRPSYPKSNASFYGRLHLQK--- 240

Query: 241 RSRLPPTENNSPALPSQPPTACGSHP-QKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTA 300
                       A PS PP     H   +  A    P+ P+    M   G  PP T+   
Sbjct: 241 -----------HAYPSVPPEQAMYHMWHQVQATQQKPHFPMVP-TMGSTGFPPPPTVLHM 300

Query: 301 VPVYTAPPFPQ--PPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPA-LHKG 360
            P    PP  Q   P     +   P    A PVL R   P  A+  P  R+ LP  +HK 
Sbjct: 301 YP----PPRGQFTMPSSQDGLGLIPCYPEASPVLPRYFSPYPASFVP--RRPLPVNVHKI 360

Query: 361 DSLTVLKEDPPTIATEDSADTLKASDHSAASASA 386
               ++  D   +          A D S  S +A
Sbjct: 361 HEKRLVGADMVELPDAAVFSRYTAPDFSGTSENA 367

[Close]

BLAST of MS005073 vs. ExPASy Swiss-Prot
Match: Q9LJF5 (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.4e-59
Identity = 156/348 (44.83%), Postives = 212/348 (60.92%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSY+  REGPDHAPRFKASVNFNGEIFESP +C+TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL++L+++GPS SL AR+LDETG+YKNLLQE A R G  LP YT+VRSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
            ++ELAG++F GE AK KKQAEKNAA+AAW SL+++ +      +    ++ EQ ++AR 
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR-----LDPLRGEEKEQEIVARV 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           L  +R  E + R  PN      ++   ++ R    Q    TT+     +C+K +    L 
Sbjct: 181 LSRFRPKE-VKRREPNQSR---RRTVIRTIR----QNTTTTTTTTGDLLCEK-LRSINLY 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
             E +S + P Q      ++  +  +         + Y    + +  P   +  + + T+
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDP---KPEMRIKTS 300

Query: 301 PPFPQPPKVP----SQMRAAPPI-----RMAPPVLIRQAIPVFATPPP 340
            P P    V     S++   P       ++AP V IR  IPV + PPP
Sbjct: 301 SPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPP 331

[Close]

BLAST of MS005073 vs. ExPASy TrEMBL
Match: A0A6J1CIU4 (double-stranded RNA-binding protein 2 OS=Momordica charantia OX=3673 GN=LOC111011373 PE=4 SV=1)

HSP 1 Score: 802.0 bits (2070), Expect = 1.2e-228
Identity = 419/421 (99.52%), Postives = 420/421 (99.76%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP
Sbjct: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
           PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVY+A
Sbjct: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYSA 300

Query: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360
           PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED
Sbjct: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360

Query: 361 PPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK 420
           PPTIATEDSADTLKASDHSA SASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK
Sbjct: 361 PPTIATEDSADTLKASDHSATSASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK 420

Query: 421 I 422
           I
Sbjct: 421 I 421

[Close]

BLAST of MS005073 vs. ExPASy TrEMBL
Match: A0A6J1H5X1 (double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111459856 PE=4 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 1.9e-189
Identity = 360/421 (85.51%), Postives = 376/421 (89.31%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHC TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSE ESSD+PEQV+IARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           LLNYRL EKMF+TNPN PMPFPKKLSFQSPRA SPQPPPATTSKILPFICKKP+ RSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
           PTE NSP LPS P TA GSHPQKFPAPGAVPYVPIR YRMPCRGIVPPVTIRTAVPVY A
Sbjct: 241 PTEYNSPTLPSHPLTAYGSHPQKFPAPGAVPYVPIRQYRMPCRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360
           PPF QPP V  Q+R +  IR+APPV +RQAIPVFA  PP +RKE  ALHKGDSLTV K+D
Sbjct: 301 PPFTQPPNVHPQVRTSQHIRIAPPVSVRQAIPVFAAAPPLSRKEFSALHKGDSLTVHKQD 360

Query: 361 PPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK 420
           P T   E SA+T KA DHSA  AS PV L  +SNQ  ETQ+ NA +LDET+TVQ+LKQLK
Sbjct: 361 PSTTTVEGSANTSKA-DHSA--ASGPVLLTTTSNQVPETQSPNATSLDETKTVQHLKQLK 418

Query: 421 I 422
           I
Sbjct: 421 I 418

[Close]

BLAST of MS005073 vs. ExPASy TrEMBL
Match: A0A6J1K0V3 (double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111491377 PE=4 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 1.6e-188
Identity = 361/421 (85.75%), Postives = 377/421 (89.55%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHC TLR AEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCPTLRLAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
           GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSE ESSD+PEQV+IARA
Sbjct: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEVESSDEPEQVMIARA 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           LLNYRL EKMF+TNPN PMPFPKKLSFQSPRA SPQPPPATTSKILPFICKKP+ RSRLP
Sbjct: 181 LLNYRLKEKMFKTNPNVPMPFPKKLSFQSPRATSPQPPPATTSKILPFICKKPISRSRLP 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
           PTE NSP LPS P TA G HPQKFPAPGAVPYVPIR YRMP RGIVPPVTIRTAVPVY A
Sbjct: 241 PTEYNSPTLPSHPRTAYGCHPQKFPAPGAVPYVPIRQYRMPSRGIVPPVTIRTAVPVYAA 300

Query: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360
           PPF QPP V SQ+R +  IR+APPV +RQAIPVFA PPP +RKEL ALHKGDSLTV K+D
Sbjct: 301 PPFTQPPIVHSQVRTSQHIRIAPPVSVRQAIPVFAAPPPLSRKELSALHKGDSLTVDKQD 360

Query: 361 PPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLDETETVQNLKQLK 420
           P T A E SA+T KA DHSA  AS PV L  +S Q  E Q+TNA +LDET+TVQ+LKQLK
Sbjct: 361 PSTTAVEGSANTSKA-DHSA--ASDPVLLTRTSIQVPEAQSTNATSLDETKTVQHLKQLK 418

Query: 421 I 422
           I
Sbjct: 421 I 418

[Close]

BLAST of MS005073 vs. ExPASy TrEMBL
Match: A0A6J1FYW0 (double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111449096 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 4.4e-186
Identity = 358/419 (85.44%), Postives = 374/419 (89.26%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGE+FESPNHC TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEVFESPNHCPTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AE+ALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEIALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
           GSIELAGITF GEPAKNKKQAEKNAALAAWSSLKQLAKEAASSS  ESSD+PEQV+IARA
Sbjct: 121 GSIELAGITFIGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSAVESSDEPEQVMIARA 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           L NY L EK FRTN NAPMPFPKKLS Q+PRA S QPPPATTSKILPFIC+KPVPRSRLP
Sbjct: 181 LSNYCLKEKTFRTNSNAPMPFPKKLSLQTPRATSQQPPPATTSKILPFICQKPVPRSRLP 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
           PT+NNS  LPS P TACGSHPQKFPAPGAVPYVPI+ Y MPCRGIV PVTIRTAVPVY+A
Sbjct: 241 PTKNNSTTLPSHPLTACGSHPQKFPAPGAVPYVPIQQYSMPCRGIVLPVTIRTAVPVYSA 300

Query: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360
            P PQP KVPSQMR + PIR+APPV IRQAIPVFA PPP +RKEL AL KGDS TV K+D
Sbjct: 301 SPCPQPLKVPSQMRPSQPIRIAPPVSIRQAIPVFAAPPPLSRKELSALPKGDSPTVPKQD 360

Query: 361 PPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLD-ETETVQNLKQ 419
           PPTIATEDSAD+L A DHS   AS PVSL    NQ  ETQNT AINLD ET+TV+NLKQ
Sbjct: 361 PPTIATEDSADSLIA-DHSV--ASTPVSLTVPPNQVPETQNTKAINLDEETKTVKNLKQ 416

[Close]

BLAST of MS005073 vs. ExPASy TrEMBL
Match: A0A6J1J8R1 (double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483627 PE=4 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 2.4e-184
Identity = 354/419 (84.49%), Postives = 372/419 (88.78%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGE+FESPNHC TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEVFESPNHCPTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AE+ALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT
Sbjct: 61  AEIALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
           GSIELAGI F GEPAKNKKQAEKNAALAAWSSLKQLAKEAASSS  ESSD+PEQV+IARA
Sbjct: 121 GSIELAGIPFIGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSAVESSDEPEQVMIARA 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           L NY L EK FRTN N PMPFPKKLSFQ+PRA S  PPPATTSKILPFIC+KPVPRSRLP
Sbjct: 181 LSNYCLKEKTFRTNSNGPMPFPKKLSFQTPRATSQHPPPATTSKILPFICQKPVPRSRLP 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
           PT+NNS  LPS P TACGSHPQKFPAPGAVPYVPI+ YRMPCRGIV PVTIRTAVPVY+A
Sbjct: 241 PTKNNSTTLPSHPLTACGSHPQKFPAPGAVPYVPIQQYRMPCRGIVLPVTIRTAVPVYSA 300

Query: 301 PPFPQPPKVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFTRKELPALHKGDSLTVLKED 360
            P PQP K PSQ+R + PIR+APPV IRQAIPVFA PPP +RKEL AL KG+S TV K+D
Sbjct: 301 SPCPQPLKAPSQIRPSQPIRIAPPVSIRQAIPVFAAPPPLSRKELSALPKGESPTVPKQD 360

Query: 361 PPTIATEDSADTLKASDHSAASASAPVSLAASSNQAQETQNTNAINLD-ETETVQNLKQ 419
           PPTIATEDSAD+L A DHS   AS PVSL    NQ  ETQNT AINLD ET+TV+NLKQ
Sbjct: 361 PPTIATEDSADSLIA-DHSV--ASTPVSLTVPPNQVPETQNTKAINLDEETKTVKNLKQ 416

[Close]

BLAST of MS005073 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 423.3 bits (1087), Expect = 2.3e-118
Identity = 254/436 (58.26%), Postives = 303/436 (69.50%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKA+VNFNGEIFESP +C+TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVALN+L+NRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLP+YTT RSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASS-SEAESSDDPEQVVIAR 180
           G++ELAGITFTG+PAKNKKQAEKNAA+AAWSSLKQLAKE +SS  E E+ D+ EQV+IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRLMEKM-FRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKP---VP 240
           AL+NYR+ E +   ++ +AP+PF KK   Q+ R  SPQP PATTS+ILPFIC K      
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 RSRLPPTENNSPALPSQPPTACGSHP-QKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTA 300
           RS L  T      + +   +     P Q+F  P   PYVP+R +R  C G+ PPVTIRTA
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP---PYVPMRQFRSQCHGMAPPVTIRTA 300

Query: 301 VPVYTAPPFPQPP-----------KVPSQMRAAPPIRMAPPVLIRQAIPVFATPPPFT-- 360
           VPV++APP P PP            VPS MR APP+R+APPV IR A+PVFA+ PP    
Sbjct: 301 VPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIR 360

Query: 361 ----------RKELPALHKGDSLTVLKEDPPTIATEDSADTLKASDHSAASASAPVSLAA 408
                        + ++ + +S+ VL  D   I  E S  T+   + +A+  +       
Sbjct: 361 TAVKPTVEAGETRISSVQEKESIPVL-PDSLEIGVEGSTITITDCEKTASKETERAEFKD 420

[Close]

BLAST of MS005073 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 247.7 bits (631), Expect = 1.7e-65
Identity = 164/355 (46.20%), Postives = 210/355 (59.15%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY+ +REGPDHAPRFKASVNFNGEIFESP +C+TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEV+LN L++R PS SL A+ILDETG+YKNLLQE A R G  LP YT+VRSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
            ++ELAG+TFTGE AK KKQAEKNAA+AAWSSLK++      SS     ++ EQ  +AR 
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM------SSLDSQDEEKEQEAVARV 180

Query: 181 LLNYRLMEKMFRTNPN-----------------APMPFPKKLSFQSPRAAS--------- 240
           L  ++  E   R   N                   + +   L+ Q+  ++S         
Sbjct: 181 LSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHKN 240

Query: 241 -------PQPPPATTSKILPFICKKPVPRSRLPPTEN-----NSPALPSQPPTACGSHPQ 300
                  P PPP  +SKILPFI +     S+   TE      NS A  ++  T      +
Sbjct: 241 SSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLS---K 300

Query: 301 KFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA-PPFPQPPKVPSQMRAA 317
           + P      Y  +    +    + P V +R+ +PV+ A PP P P   PS + ++
Sbjct: 301 QMPFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPPPKPNPNLNPSSLSSS 346

[Close]

BLAST of MS005073 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 231.9 bits (590), Expect = 9.6e-61
Identity = 156/348 (44.83%), Postives = 212/348 (60.92%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSY+  REGPDHAPRFKASVNFNGEIFESP +C+TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL++L+++GPS SL AR+LDETG+YKNLLQE A R G  LP YT+VRSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
            ++ELAG++F GE AK KKQAEKNAA+AAW SL+++ +      +    ++ EQ ++AR 
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR-----LDPLRGEEKEQEIVARV 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           L  +R  E + R  PN      ++   ++ R    Q    TT+     +C+K +    L 
Sbjct: 181 LSRFRPKE-VKRREPNQSR---RRTVIRTIR----QNTTTTTTTTGDLLCEK-LRSINLY 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
             E +S + P Q      ++  +  +         + Y    + +  P   +  + + T+
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDP---KPEMRIKTS 300

Query: 301 PPFPQPPKVP----SQMRAAPPI-----RMAPPVLIRQAIPVFATPPP 340
            P P    V     S++   P       ++AP V IR  IPV + PPP
Sbjct: 301 SPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPP 331

[Close]

BLAST of MS005073 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 231.9 bits (590), Expect = 9.6e-61
Identity = 156/348 (44.83%), Postives = 212/348 (60.92%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSY+  REGPDHAPRFKASVNFNGEIFESP +C+TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           AEVAL++L+++GPS SL AR+LDETG+YKNLLQE A R G  LP YT+VRSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAKEAASSSEAESSDDPEQVVIARA 180
            ++ELAG++F GE AK KKQAEKNAA+AAW SL+++ +      +    ++ EQ ++AR 
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR-----LDPLRGEEKEQEIVARV 180

Query: 181 LLNYRLMEKMFRTNPNAPMPFPKKLSFQSPRAASPQPPPATTSKILPFICKKPVPRSRLP 240
           L  +R  E + R  PN      ++   ++ R    Q    TT+     +C+K +    L 
Sbjct: 181 LSRFRPKE-VKRREPNQSR---RRTVIRTIR----QNTTTTTTTTGDLLCEK-LRSINLY 240

Query: 241 PTENNSPALPSQPPTACGSHPQKFPAPGAVPYVPIRHYRMPCRGIVPPVTIRTAVPVYTA 300
             E +S + P Q      ++  +  +         + Y    + +  P   +  + + T+
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDP---KPEMRIKTS 300

Query: 301 PPFPQPPKVP----SQMRAAPPI-----RMAPPVLIRQAIPVFATPPP 340
            P P    V     S++   P       ++AP V IR  IPV + PPP
Sbjct: 301 SPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPP 331

[Close]

BLAST of MS005073 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-29
Identity = 72/154 (46.75%), Postives = 94/154 (61.04%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYSSVREGPDHAPRFKASVNFNGEIFESPNHCATLRQAEHSA 60
           +YK QLQ  A +    LP Y++ REGP HAPRF+ +V F G+ F+S     TL+ AEH+A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNSLANRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTVRSGLGHLPVFT 120
           A++A+ SL  + P     A        YKNLLQEIAQ+  + LP Y T  SG  H P FT
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 GSIELAGITFTGEPAKNKKQAEKNAALAAWSSLK 155
            ++E AG  F+GE AK KK AE +AA  A+ S+K
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIK 149

The following BLAST results are available for this feature:

BLAST of MS005073 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140798.1	2.5e-228	99.52	double-stranded RNA-binding protein 2 [Momordica charantia]	[more]
KAG7035466.1	3.5e-190	85.75	Double-stranded RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6605550.1	1.0e-189	85.51	Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_023534429.1	1.8e-189	85.27	double-stranded RNA-binding protein 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958714.1	3.9e-189	85.51	double-stranded RNA-binding protein 2-like [Cucurbita moschata]	[more]

BLAST of MS005073 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN2	3.2e-117	58.26	Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE...	[more]
Q9AV50	1.5e-106	64.91	Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8GY79	2.4e-64	46.20	Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE...	[more]
Q0DKP4	3.8e-62	45.18	Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9LJF5	1.4e-59	44.83	Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE...	[more]

BLAST of MS005073 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIU4	1.2e-228	99.52	double-stranded RNA-binding protein 2 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1H5X1	1.9e-189	85.51	double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K0V3	1.6e-188	85.75	double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1FYW0	4.4e-186	85.44	double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1J8R1	2.4e-184	84.49	double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of MS005073 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28380.1	2.3e-118	58.26	dsRNA-binding protein 2	[more]
AT5G41070.1	1.7e-65	46.20	dsRNA-binding protein 5	[more]
AT3G26932.1	9.6e-61	44.83	dsRNA-binding protein 3	[more]
AT3G26932.2	9.6e-61	44.83	dsRNA-binding protein 3	[more]
AT3G62800.1	1.5e-29	46.75	double-stranded-RNA-binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 2..69 e-value: 5.6E-17 score: 72.4 coord: 88..154 e-value: 5.8E-19 score: 79.0
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 88..153 e-value: 9.5E-12 score: 45.5 coord: 2..68 e-value: 3.7E-14 score: 53.2
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 1..70 score: 12.523735
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 87..155 score: 11.479855
None	No IPR available	GENE3D	3.30.160.20		coord: 84..155 e-value: 9.3E-21 score: 75.9
None	No IPR available	GENE3D	3.30.160.20		coord: 2..83 e-value: 1.3E-21 score: 78.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..404
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..404
None	No IPR available	PANTHER	PTHR46031:SF7	DOUBLE-STRANDED RNA-BINDING PROTEIN 2-LIKE	coord: 1..344
None	No IPR available	PANTHER	PTHR46031	FAMILY NOT NAMED	coord: 1..344
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 2..68
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 88..157
IPR044451	AtDRB-like, second double-stranded RNA binding domain, plant	CDD	cd19908	DSRM_AtDRB-like_rpt2	coord: 86..154 e-value: 5.41794E-38 score: 130.292
IPR044450	AtDRB-like, first double-stranded RNA binding domain, plant	CDD	cd19907	DSRM_AtDRB-like_rpt1	coord: 1..69 e-value: 1.89503E-40 score: 136.452

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005073.1	MS005073.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003725	double-stranded RNA binding