MS005057 (gene) Bitter gourd (TR) v1

Overview


Name	MS005057
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Auxin response factor
Location	scaffold176: 2380273 .. 2381975 (-)
RNA-Seq Expression	MS005057
Synteny	MS005057

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCTTTGGCATGCTTGTGCTGGCCCTCTCACCTCATTGCCCAAGAAAGGAAATGTAGTTGTCTACTTCCCACAAGGTCACTTGGAGCAGATTGCCTCCTCAGCCTCCCCCTTTTCCCCCATGGAGATGCGCCCTTTTGACCTCCACCCACAGATCCTCTGCAAAGTCACCAATGTCCAACTACTTGTAAGTACTGGGTTTACATATTAAATTCAATTTCTCCCTTTTTCTCTCTCAAGCATCCTCCGTTTCCCTTGACACCCTTTCGACTTTTCGCTTTTCTTACCATTTTGACAGGCCAATAAGGAGAATGATGAGGTCTACACACAACTTACTCTACTTCCCTTACCAGAGGTAGCTTTCAACTACTCAATTTATTTATTTTGGAGTTCGGGAAGGTTAATGAAGTTTGTAGCTTTTTTAGTATGTTATAGTTCTGAAGCTAAATTTCTACACGAGTATGTTTTCTTCTGTTTAATTTAGCTCGAAGATGAGATGAGTCTTACAGTGGCTGTACCATAAATTTGGGTATTGTATAGTTACTAGGCACTGATCTAGGGGGCAAAAAGCTGGAGGAATTGGCGTTGAATGGAGCTGATGGAGATGGGAGCGGAGGATCGCCTACTAGATCTACACCTCACATGTTCTGCAAAACACTCACAGCATCTGACACCAGTACCCACGGAGGGTTCTCTGTTCCTCGCAGAGCTGCTGAAGACTGTTTCCCAACTCTGGTTTCCATTGCTTTCCTATGCCATATATTCAGTTTTTTCCTCAAATGAAATGAGTTGGGTTTTATTTCAGTTGTTTTATTTTGGGTATATTCTGACTGAGGTTGATGGTTACTGCAGGATTACACTCAACTTAGGCCATCTCAAGAGCTAATAGCCAAGGACCTGCATGGCGTGGAGTGGAGGTTTAAACATATCTACAGAGGTATATTATTGTGAGATTCGTTTGGTGTTGTTTTATTGGCTGGCAAAATTGAACTCATTCTTGAATAAACTTTGCAGGTCAACCCAGGCGGCATCTGCTCACTACTGGGTGGAGTATTTTTGTAAGCCAAAAGAATCTTATTTCTGGGGATGCGGTGCTCTTTCTAAGGTACCTACGTTCATATTAGCACTTAAGTATGAATTACATTTAAATCCCGCCATAGCCATTTTGTGTATTTATGCAAATCTTTCCTTCTGCATGAGTGTCATTAGTTAGCCCAGCCTTTATACTTAGCTTGTGGAAACCAAATTGGCATTTTATTATAATTTCGGGCGACTTTATCTTTGAAATATTTTCTTTTTGACCAAAATTGGATCAAGAATTCCAGATAAATCCATTTTTCTATTAATATGTAAAAAAATCAGTTGATGAATTAAAATGGCAGAGTAGATGCTATTTGGCAGACTATTTGCGGAGAGTAAAACAAGATACAAATTTATGCAGTATAATGTTAAAATGAAGTTTGAGATACTTTTAAAATGGAATGTTCACATCTTTTGTTTAGTAGATGATCTGAAACCATTTGTGATTGTGTCTGCAGGGGTGAAAATGGAGAGCTAAGGTTGGGAATAAGGAGAGCTGTTCGGCCTAGAAATGGTCTTCCTGATTCAATTGTTGGCAACCAAAATTCTTGTGCAAACGATCTTGCTTGTGTGGTGAAAGCAATATCCACCAAGAGCATGTTTGATGTGTTTTACAATCCAAGG

mRNA sequence

GAGCTTTGGCATGCTTGTGCTGGCCCTCTCACCTCATTGCCCAAGAAAGGAAATGTAGTTGTCTACTTCCCACAAGGTCACTTGGAGCAGATTGCCTCCTCAGCCTCCCCCTTTTCCCCCATGGAGATGCGCCCTTTTGACCTCCACCCACAGATCCTCTGCAAAGTCACCAATGTCCAACTACTTGCCAATAAGGAGAATGATGAGGTCTACACACAACTTACTCTACTTCCCTTACCAGAGGTAGCTTTCAACTACTCAATTTATTTATTTTGGAGATCGCCTACTAGATCTACACCTCACATGTTCTGCAAAACACTCACAGCATCTGACACCAGTACCCACGGAGGGTTCTCTGTTCCTCGCAGAGCTGCTGAAGACTGTTTCCCAACTCTGGATTACACTCAACTTAGGCCATCTCAAGAGCTAATAGCCAAGGACCTGCATGGCGTGGAGTGGAGGTTTAAACATATCTACAGAGGTCAACCCAGGCGGCATCTGCTCACTACTGGGTGGAGTATTTTTGTAAGCCAAAAGAATCTTATTTCTGGGGATGCGGTGCTCTTTCTAAGGGGTGAAAATGGAGAGCTAAGGTTGGGAATAAGGAGAGCTGTTCGGCCTAGAAATGGTCTTCCTGATTCAATTGTTGGCAACCAAAATTCTTGTGCAAACGATCTTGCTTGTGTGGTGAAAGCAATATCCACCAAGAGCATGTTTGATGTGTTTTACAATCCAAGG

Coding sequence (CDS)

GAGCTTTGGCATGCTTGTGCTGGCCCTCTCACCTCATTGCCCAAGAAAGGAAATGTAGTTGTCTACTTCCCACAAGGTCACTTGGAGCAGATTGCCTCCTCAGCCTCCCCCTTTTCCCCCATGGAGATGCGCCCTTTTGACCTCCACCCACAGATCCTCTGCAAAGTCACCAATGTCCAACTACTTGCCAATAAGGAGAATGATGAGGTCTACACACAACTTACTCTACTTCCCTTACCAGAGGTAGCTTTCAACTACTCAATTTATTTATTTTGGAGATCGCCTACTAGATCTACACCTCACATGTTCTGCAAAACACTCACAGCATCTGACACCAGTACCCACGGAGGGTTCTCTGTTCCTCGCAGAGCTGCTGAAGACTGTTTCCCAACTCTGGATTACACTCAACTTAGGCCATCTCAAGAGCTAATAGCCAAGGACCTGCATGGCGTGGAGTGGAGGTTTAAACATATCTACAGAGGTCAACCCAGGCGGCATCTGCTCACTACTGGGTGGAGTATTTTTGTAAGCCAAAAGAATCTTATTTCTGGGGATGCGGTGCTCTTTCTAAGGGGTGAAAATGGAGAGCTAAGGTTGGGAATAAGGAGAGCTGTTCGGCCTAGAAATGGTCTTCCTGATTCAATTGTTGGCAACCAAAATTCTTGTGCAAACGATCTTGCTTGTGTGGTGAAAGCAATATCCACCAAGAGCATGTTTGATGTGTTTTACAATCCAAGG

Protein sequence

ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQLLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFDVFYNPR

Homology

[Close]

BLAST of MS005057 vs. NCBI nr
Match: XP_022140594.1 (auxin response factor 4 isoform X1 [Momordica charantia])

HSP 1 Score: 474.6 bits (1220), Expect = 5.3e-130
Identity = 236/260 (90.77%), Postives = 238/260 (91.54%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 113

Query: 61  LLANKENDEVYTQLTLLPLP-------------EVAFNYSI-YLFWRSPTRSTPHMFCKT 120
           LLANKENDEVYTQLTLLPLP             E+A N +       SPTRSTPHMFCKT
Sbjct: 114 LLANKENDEVYTQLTLLPLPELLGTDLGGKTLEELALNGADGDGSGGSPTRSTPHMFCKT 173

Query: 121 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 180
           LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH
Sbjct: 174 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 233

Query: 181 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 240
           LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL
Sbjct: 234 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 293

Query: 241 ACVVKAISTKSMFDVFYNPR 247
           ACVVKAISTKSMFDVFYNPR
Sbjct: 294 ACVVKAISTKSMFDVFYNPR 313

[Close]

BLAST of MS005057 vs. NCBI nr
Match: XP_022140595.1 (auxin response factor 4 isoform X2 [Momordica charantia])

HSP 1 Score: 474.6 bits (1220), Expect = 5.3e-130
Identity = 236/260 (90.77%), Postives = 238/260 (91.54%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 113

Query: 61  LLANKENDEVYTQLTLLPLP-------------EVAFNYSI-YLFWRSPTRSTPHMFCKT 120
           LLANKENDEVYTQLTLLPLP             E+A N +       SPTRSTPHMFCKT
Sbjct: 114 LLANKENDEVYTQLTLLPLPELLGTDLGGKTLEELALNGADGDGSGGSPTRSTPHMFCKT 173

Query: 121 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 180
           LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH
Sbjct: 174 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 233

Query: 181 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 240
           LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL
Sbjct: 234 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 293

Query: 241 ACVVKAISTKSMFDVFYNPR 247
           ACVVKAISTKSMFDVFYNPR
Sbjct: 294 ACVVKAISTKSMFDVFYNPR 313

[Close]

BLAST of MS005057 vs. NCBI nr
Match: XP_038901194.1 (auxin response factor 4 [Benincasa hispida])

HSP 1 Score: 445.7 bits (1145), Expect = 2.7e-121
Identity = 225/260 (86.54%), Postives = 229/260 (88.08%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIA SASPFSPMEMR FDL PQILC+V NV 
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIA-SASPFSPMEMRTFDLQPQILCRVINVH 113

Query: 61  LLANKENDEVYTQLTLLPLPEVAFN-------YSIYL-------FWRSPTRSTPHMFCKT 120
           LLANKENDEVYTQLTL PLPE+  +         + L          SPTRSTPHMFCKT
Sbjct: 114 LLANKENDEVYTQLTLRPLPELLGSGLEAKELEELALNGADGDGSGGSPTRSTPHMFCKT 173

Query: 121 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 180
           LTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH
Sbjct: 174 LTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 233

Query: 181 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 240
           LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL
Sbjct: 234 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 293

Query: 241 ACVVKAISTKSMFDVFYNPR 247
           A VVKAISTKS FDVFYNPR
Sbjct: 294 ARVVKAISTKSTFDVFYNPR 312

[Close]

BLAST of MS005057 vs. NCBI nr
Match: XP_023534377.1 (auxin response factor 4-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 445.3 bits (1144), Expect = 3.5e-121
Identity = 225/260 (86.54%), Postives = 231/260 (88.85%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIA SASPFSPMEMR FDL PQILC+V NV 
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIA-SASPFSPMEMRTFDLQPQILCRVINVH 113

Query: 61  LLANKENDEVYTQLTLLPLP-------------EVAFNYSI-YLFWRSPTRSTPHMFCKT 120
           LLANKENDEVYTQLTLLPLP             E+A N +       SPTRSTPHMFCKT
Sbjct: 114 LLANKENDEVYTQLTLLPLPEFLGTGLEGKELEELALNGADGDGSGVSPTRSTPHMFCKT 173

Query: 121 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 180
           LTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH
Sbjct: 174 LTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 233

Query: 181 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 240
           LLTTGWS+FVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCA+DL
Sbjct: 234 LLTTGWSLFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCADDL 293

Query: 241 ACVVKAISTKSMFDVFYNPR 247
           A VVKAISTKS+FDVFYNPR
Sbjct: 294 ARVVKAISTKSIFDVFYNPR 312

[Close]

BLAST of MS005057 vs. NCBI nr
Match: XP_023534376.1 (auxin response factor 4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 445.3 bits (1144), Expect = 3.5e-121
Identity = 225/260 (86.54%), Postives = 231/260 (88.85%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIA SASPFSPMEMR FDL PQILC+V NV 
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIA-SASPFSPMEMRTFDLQPQILCRVINVH 113

Query: 61  LLANKENDEVYTQLTLLPLP-------------EVAFNYSI-YLFWRSPTRSTPHMFCKT 120
           LLANKENDEVYTQLTLLPLP             E+A N +       SPTRSTPHMFCKT
Sbjct: 114 LLANKENDEVYTQLTLLPLPEFLGTGLEGKELEELALNGADGDGSGVSPTRSTPHMFCKT 173

Query: 121 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 180
           LTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH
Sbjct: 174 LTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 233

Query: 181 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 240
           LLTTGWS+FVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCA+DL
Sbjct: 234 LLTTGWSLFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCADDL 293

Query: 241 ACVVKAISTKSMFDVFYNPR 247
           A VVKAISTKS+FDVFYNPR
Sbjct: 294 ARVVKAISTKSIFDVFYNPR 312

[Close]

BLAST of MS005057 vs. ExPASy Swiss-Prot
Match: Q9ZTX9 (Auxin response factor 4 OS=Arabidopsis thaliana OX=3702 GN=ARF4 PE=1 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 4.4e-103
Identity = 188/257 (73.15%), Postives = 206/257 (80.16%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLT LPKKGNVVVYFPQGHLEQ A   S  SP+E+  FDL+PQI+C+V NVQ
Sbjct: 65  ELWHACAGPLTCLPKKGNVVVYFPQGHLEQDA-MVSYSSPLEIPKFDLNPQIVCRVVNVQ 124

Query: 61  LLANKENDEVYTQLTLLPLPEVA-----------FNYSIYLFWRSPTRSTPHMFCKTLTA 120
           LLANK+ DEVYTQ+TLLPL E +                     S  + TPHMFCKTLTA
Sbjct: 125 LLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTLTA 184

Query: 121 SDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLT 180
           SDTSTHGGFSVPRRAAEDCF  LDY Q RPSQELIAKDLHGVEW+F+HIYRGQPRRHLLT
Sbjct: 185 SDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLT 244

Query: 181 TGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACV 240
           TGWSIFVSQKNL+SGDAVLFLR E GELRLGIRRA RPRNGLPDSI+  +NSC+N L+ V
Sbjct: 245 TGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSII-EKNSCSNILSLV 304

Query: 241 VKAISTKSMFDVFYNPR 247
             A+STKSMF VFY+PR
Sbjct: 305 ANAVSTKSMFHVFYSPR 319

[Close]

BLAST of MS005057 vs. ExPASy Swiss-Prot
Match: Q8S985 (Auxin response factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF15 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.2e-79
Identity = 146/252 (57.94%), Postives = 179/252 (71.03%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGP+  LP+KG VVVY PQGHLE +  + +  +     P    P + C+V +V 
Sbjct: 38  ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVP----PHVFCRVVDVT 97

Query: 61  LLANKENDEVYTQLTLLPLPEVAFNYS------IYLFWRSPTRSTPHMFCKTLTASDTST 120
           LLA+   DEVY QL+L+P  E     +           +      PHMFCKTLTASDTST
Sbjct: 98  LLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTST 157

Query: 121 HGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSI 180
           HGGFSVPRRAAEDCFP LDY+Q RPSQEL+AKDLH  EWRF+HIYRGQPRRHLLTTGWS 
Sbjct: 158 HGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSA 217

Query: 181 FVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAIS 240
           FV++K L+SGDAVLFLRG++GELRLG+RRA + +NG     + NQ S    LA V  A++
Sbjct: 218 FVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVA 277

Query: 241 TKSMFDVFYNPR 247
           T+S+F+++YNPR
Sbjct: 278 TESVFNIYYNPR 285

[Close]

BLAST of MS005057 vs. ExPASy Swiss-Prot
Match: O23661 (Auxin response factor 3 OS=Arabidopsis thaliana OX=3702 GN=ARF3 PE=1 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 2.9e-78
Identity = 145/256 (56.64%), Postives = 181/256 (70.70%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPL SLPK+G++V+YFPQGHLEQ    ++         + L P + C++ +V+
Sbjct: 54  ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAAI-------YGLPPHVFCRILDVK 113

Query: 61  LLANKENDEVYTQLTLLPLPE----------VAFNYSIYLFWRSPTRSTPHMFCKTLTAS 120
           L A    DEVY Q++LLP  E          +  +     +      +TPHMFCKTLTAS
Sbjct: 114 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 173

Query: 121 DTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTT 180
           DTSTHGGFSVPRRAAEDCFP LDY+Q RPSQEL+A+DLHG+EWRF+HIYRGQPRRHLLTT
Sbjct: 174 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 233

Query: 181 GWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVV 240
           GWS FV++K L+SGDAVLFLRG++G+LRLG+RRA +       S   NQN   N+ + V 
Sbjct: 234 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 293

Query: 241 KAISTKSMFDVFYNPR 247
            AIST S+F + YNP+
Sbjct: 294 HAISTHSVFSISYNPK 302

[Close]

BLAST of MS005057 vs. ExPASy Swiss-Prot
Match: Q5JK20 (Auxin response factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF4 PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.8e-78
Identity = 136/249 (54.62%), Postives = 182/249 (73.09%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPL ++P+ G++V YFPQGH+EQ+ +S +  +  +MR +DL  ++LC+V NV+
Sbjct: 24  ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVLNVE 83

Query: 61  LLANKENDEVYTQLTLLPLP---EVAFNYSIYLFWRSPTRSTPHMFCKTLTASDTSTHGG 120
           L A ++ DEVY Q+ L+P P   E+A   +         R     FCKTLTASDTSTHGG
Sbjct: 84  LKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDTSTHGG 143

Query: 121 FSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVS 180
           FSV RR A++C P LD TQ  P+QEL+AKDLH ++WRF+HI+RGQPRRHLL +GWS+FVS
Sbjct: 144 FSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVS 203

Query: 181 QKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKS 240
            K L++GDA +FLRGENGELR+G+RRA+R  + +P S++ +Q+     LA    AI+TKS
Sbjct: 204 SKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKS 263

Query: 241 MFDVFYNPR 247
           MF V+Y PR
Sbjct: 264 MFTVYYKPR 272

[Close]

BLAST of MS005057 vs. ExPASy Swiss-Prot
Match: Q6YVY0 (Auxin response factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF7 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.7e-76
Identity = 136/246 (55.28%), Postives = 172/246 (69.92%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPL ++P++G +V YFPQGH+EQ+ +S        +  F+L  +ILCKV NV+
Sbjct: 26  ELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKVVNVE 85

Query: 61  LLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTPHMFCKTLTASDTSTHGGFSV 120
           L A  ++DEVY Q+ L P  +     S       P +   H FCKTLTASDTSTHGGFSV
Sbjct: 86  LRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTHGGFSV 145

Query: 121 PRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKN 180
            RR AE+C P LD TQ  P QEL+A+DLHG EW F+HI+RGQPRRHLLTTGWS+FVS K 
Sbjct: 146 LRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKR 205

Query: 181 LISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFD 240
           L++GDA +FLRGENGELR+G+RR +R  N +P S++ + +     LA    AIST ++F 
Sbjct: 206 LVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGTLFS 265

Query: 241 VFYNPR 247
           VFY PR
Sbjct: 266 VFYKPR 271

[Close]

BLAST of MS005057 vs. ExPASy TrEMBL
Match: A0A6J1CFF8 (Auxin response factor OS=Momordica charantia OX=3673 GN=LOC111011210 PE=3 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.6e-130
Identity = 236/260 (90.77%), Postives = 238/260 (91.54%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 113

Query: 61  LLANKENDEVYTQLTLLPLP-------------EVAFNYSI-YLFWRSPTRSTPHMFCKT 120
           LLANKENDEVYTQLTLLPLP             E+A N +       SPTRSTPHMFCKT
Sbjct: 114 LLANKENDEVYTQLTLLPLPELLGTDLGGKTLEELALNGADGDGSGGSPTRSTPHMFCKT 173

Query: 121 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 180
           LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH
Sbjct: 174 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 233

Query: 181 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 240
           LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL
Sbjct: 234 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 293

Query: 241 ACVVKAISTKSMFDVFYNPR 247
           ACVVKAISTKSMFDVFYNPR
Sbjct: 294 ACVVKAISTKSMFDVFYNPR 313

[Close]

BLAST of MS005057 vs. ExPASy TrEMBL
Match: A0A6J1CG42 (Auxin response factor OS=Momordica charantia OX=3673 GN=LOC111011210 PE=3 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.6e-130
Identity = 236/260 (90.77%), Postives = 238/260 (91.54%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 113

Query: 61  LLANKENDEVYTQLTLLPLP-------------EVAFNYSI-YLFWRSPTRSTPHMFCKT 120
           LLANKENDEVYTQLTLLPLP             E+A N +       SPTRSTPHMFCKT
Sbjct: 114 LLANKENDEVYTQLTLLPLPELLGTDLGGKTLEELALNGADGDGSGGSPTRSTPHMFCKT 173

Query: 121 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 180
           LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH
Sbjct: 174 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 233

Query: 181 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 240
           LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL
Sbjct: 234 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 293

Query: 241 ACVVKAISTKSMFDVFYNPR 247
           ACVVKAISTKSMFDVFYNPR
Sbjct: 294 ACVVKAISTKSMFDVFYNPR 313

[Close]

BLAST of MS005057 vs. ExPASy TrEMBL
Match: A0A5A7SXJ2 (Auxin response factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G001290 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.9e-121
Identity = 226/260 (86.92%), Postives = 228/260 (87.69%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLTSLPKKGNVVVYFPQGHLEQI SSASPFSPMEMR FDL PQILC+V NV 
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-SSASPFSPMEMRTFDLQPQILCRVINVH 113

Query: 61  LLANKENDEVYTQLTLLPLPE-----VAFNYSIYLFWR---------SPTRSTPHMFCKT 120
           LLANKENDEVYTQLTL PLPE     VA      L            SPTRSTPHMFCKT
Sbjct: 114 LLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFCKT 173

Query: 121 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 180
           LTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH
Sbjct: 174 LTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 233

Query: 181 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 240
           LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCA+DL
Sbjct: 234 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCADDL 293

Query: 241 ACVVKAISTKSMFDVFYNPR 247
           A VVKAISTKS FDVFYNPR
Sbjct: 294 ARVVKAISTKSTFDVFYNPR 312

[Close]

BLAST of MS005057 vs. ExPASy TrEMBL
Match: A0A5D3CVN1 (Auxin response factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00350 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.9e-121
Identity = 226/260 (86.92%), Postives = 228/260 (87.69%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLTSLPKKGNVVVYFPQGHLEQI SSASPFSPMEMR FDL PQILC+V NV 
Sbjct: 85  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-SSASPFSPMEMRTFDLQPQILCRVINVH 144

Query: 61  LLANKENDEVYTQLTLLPLPE-----VAFNYSIYLFWR---------SPTRSTPHMFCKT 120
           LLANKENDEVYTQLTL PLPE     VA      L            SPTRSTPHMFCKT
Sbjct: 145 LLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFCKT 204

Query: 121 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 180
           LTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH
Sbjct: 205 LTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 264

Query: 181 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 240
           LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCA+DL
Sbjct: 265 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCADDL 324

Query: 241 ACVVKAISTKSMFDVFYNPR 247
           A VVKAISTKS FDVFYNPR
Sbjct: 325 ARVVKAISTKSTFDVFYNPR 343

[Close]

BLAST of MS005057 vs. ExPASy TrEMBL
Match: A0A1S3CKC2 (Auxin response factor OS=Cucumis melo OX=3656 GN=LOC103501935 PE=3 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.9e-121
Identity = 226/260 (86.92%), Postives = 228/260 (87.69%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLTSLPKKGNVVVYFPQGHLEQI SSASPFSPMEMR FDL PQILC+V NV 
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-SSASPFSPMEMRTFDLQPQILCRVINVH 113

Query: 61  LLANKENDEVYTQLTLLPLPE-----VAFNYSIYLFWR---------SPTRSTPHMFCKT 120
           LLANKENDEVYTQLTL PLPE     VA      L            SPTRSTPHMFCKT
Sbjct: 114 LLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFCKT 173

Query: 121 LTASDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 180
           LTASDTSTHGGFSVPRRAAEDCFP LDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH
Sbjct: 174 LTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRH 233

Query: 181 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDL 240
           LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCA+DL
Sbjct: 234 LLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCADDL 293

Query: 241 ACVVKAISTKSMFDVFYNPR 247
           A VVKAISTKS FDVFYNPR
Sbjct: 294 ARVVKAISTKSTFDVFYNPR 312

[Close]

BLAST of MS005057 vs. TAIR 10
Match: AT5G60450.1 (auxin response factor 4 )

HSP 1 Score: 375.6 bits (963), Expect = 3.2e-104
Identity = 188/257 (73.15%), Postives = 206/257 (80.16%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPLT LPKKGNVVVYFPQGHLEQ A   S  SP+E+  FDL+PQI+C+V NVQ
Sbjct: 65  ELWHACAGPLTCLPKKGNVVVYFPQGHLEQDA-MVSYSSPLEIPKFDLNPQIVCRVVNVQ 124

Query: 61  LLANKENDEVYTQLTLLPLPEVA-----------FNYSIYLFWRSPTRSTPHMFCKTLTA 120
           LLANK+ DEVYTQ+TLLPL E +                     S  + TPHMFCKTLTA
Sbjct: 125 LLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTLTA 184

Query: 121 SDTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLT 180
           SDTSTHGGFSVPRRAAEDCF  LDY Q RPSQELIAKDLHGVEW+F+HIYRGQPRRHLLT
Sbjct: 185 SDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLT 244

Query: 181 TGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACV 240
           TGWSIFVSQKNL+SGDAVLFLR E GELRLGIRRA RPRNGLPDSI+  +NSC+N L+ V
Sbjct: 245 TGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSII-EKNSCSNILSLV 304

Query: 241 VKAISTKSMFDVFYNPR 247
             A+STKSMF VFY+PR
Sbjct: 305 ANAVSTKSMFHVFYSPR 319

[Close]

BLAST of MS005057 vs. TAIR 10
Match: AT2G33860.1 (Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related )

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-79
Identity = 145/256 (56.64%), Postives = 181/256 (70.70%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPL SLPK+G++V+YFPQGHLEQ    ++         + L P + C++ +V+
Sbjct: 54  ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAAI-------YGLPPHVFCRILDVK 113

Query: 61  LLANKENDEVYTQLTLLPLPE----------VAFNYSIYLFWRSPTRSTPHMFCKTLTAS 120
           L A    DEVY Q++LLP  E          +  +     +      +TPHMFCKTLTAS
Sbjct: 114 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 173

Query: 121 DTSTHGGFSVPRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTT 180
           DTSTHGGFSVPRRAAEDCFP LDY+Q RPSQEL+A+DLHG+EWRF+HIYRGQPRRHLLTT
Sbjct: 174 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 233

Query: 181 GWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVV 240
           GWS FV++K L+SGDAVLFLRG++G+LRLG+RRA +       S   NQN   N+ + V 
Sbjct: 234 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 293

Query: 241 KAISTKSMFDVFYNPR 247
            AIST S+F + YNP+
Sbjct: 294 HAISTHSVFSISYNPK 302

[Close]

BLAST of MS005057 vs. TAIR 10
Match: AT1G59750.1 (auxin response factor 1 )

HSP 1 Score: 284.6 bits (727), Expect = 7.3e-77
Identity = 135/246 (54.88%), Postives = 172/246 (69.92%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPL +LP++G  V YFP+GH+EQ+ +S       +M  F+L  +ILCKV N+Q
Sbjct: 22  ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQ 81

Query: 61  LLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTPHMFCKTLTASDTSTHGGFSV 120
             A  E DEVY Q+TLLP  + +   S     + P + T H FCKTLTASDTSTHGGFSV
Sbjct: 82  RRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSV 141

Query: 121 PRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKN 180
            RR A+DC P LD +Q  P QEL+A DLH  EW F+HI+RGQPRRHLLTTGWS+FVS K 
Sbjct: 142 LRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKK 201

Query: 181 LISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFD 240
           L++GDA +FLRGEN ELR+G+RR +R +  +P S++ + +     LA    AI+T ++F 
Sbjct: 202 LVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFS 261

Query: 241 VFYNPR 247
           VFY PR
Sbjct: 262 VFYKPR 267

[Close]

BLAST of MS005057 vs. TAIR 10
Match: AT1G59750.2 (auxin response factor 1 )

HSP 1 Score: 284.6 bits (727), Expect = 7.3e-77
Identity = 135/246 (54.88%), Postives = 172/246 (69.92%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPL +LP++G  V YFP+GH+EQ+ +S       +M  F+L  +ILCKV N+Q
Sbjct: 22  ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQ 81

Query: 61  LLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTPHMFCKTLTASDTSTHGGFSV 120
             A  E DEVY Q+TLLP  + +   S     + P + T H FCKTLTASDTSTHGGFSV
Sbjct: 82  RRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSV 141

Query: 121 PRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKN 180
            RR A+DC P LD +Q  P QEL+A DLH  EW F+HI+RGQPRRHLLTTGWS+FVS K 
Sbjct: 142 LRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKK 201

Query: 181 LISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFD 240
           L++GDA +FLRGEN ELR+G+RR +R +  +P S++ + +     LA    AI+T ++F 
Sbjct: 202 LVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFS 261

Query: 241 VFYNPR 247
           VFY PR
Sbjct: 262 VFYKPR 267

[Close]

BLAST of MS005057 vs. TAIR 10
Match: AT1G59750.3 (auxin response factor 1 )

HSP 1 Score: 284.6 bits (727), Expect = 7.3e-77
Identity = 135/246 (54.88%), Postives = 172/246 (69.92%), Query Frame = 0


Query: 1   ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASSASPFSPMEMRPFDLHPQILCKVTNVQ 60
           ELWHACAGPL +LP++G  V YFP+GH+EQ+ +S       +M  F+L  +ILCKV N+Q
Sbjct: 22  ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQ 81

Query: 61  LLANKENDEVYTQLTLLPLPEVAFNYSIYLFWRSPTRSTPHMFCKTLTASDTSTHGGFSV 120
             A  E DEVY Q+TLLP  + +   S     + P + T H FCKTLTASDTSTHGGFSV
Sbjct: 82  RRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSV 141

Query: 121 PRRAAEDCFPTLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKN 180
            RR A+DC P LD +Q  P QEL+A DLH  EW F+HI+RGQPRRHLLTTGWS+FVS K 
Sbjct: 142 LRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKK 201

Query: 181 LISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLACVVKAISTKSMFD 240
           L++GDA +FLRGEN ELR+G+RR +R +  +P S++ + +     LA    AI+T ++F 
Sbjct: 202 LVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFS 261

Query: 241 VFYNPR 247
           VFY PR
Sbjct: 262 VFYKPR 267

The following BLAST results are available for this feature:

BLAST of MS005057 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140594.1	5.3e-130	90.77	auxin response factor 4 isoform X1 [Momordica charantia]	[more]
XP_022140595.1	5.3e-130	90.77	auxin response factor 4 isoform X2 [Momordica charantia]	[more]
XP_038901194.1	2.7e-121	86.54	auxin response factor 4 [Benincasa hispida]	[more]
XP_023534377.1	3.5e-121	86.54	auxin response factor 4-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023534376.1	3.5e-121	86.54	auxin response factor 4-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS005057 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZTX9	4.4e-103	73.15	Auxin response factor 4 OS=Arabidopsis thaliana OX=3702 GN=ARF4 PE=1 SV=1	[more]
Q8S985	1.2e-79	57.94	Auxin response factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF15 PE=2 ...	[more]
O23661	2.9e-78	56.64	Auxin response factor 3 OS=Arabidopsis thaliana OX=3702 GN=ARF3 PE=1 SV=2	[more]
Q5JK20	3.8e-78	54.62	Auxin response factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF4 PE=2 SV...	[more]
Q6YVY0	2.7e-76	55.28	Auxin response factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF7 PE=2 SV...	[more]

BLAST of MS005057 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFF8	2.6e-130	90.77	Auxin response factor OS=Momordica charantia OX=3673 GN=LOC111011210 PE=3 SV=1	[more]
A0A6J1CG42	2.6e-130	90.77	Auxin response factor OS=Momordica charantia OX=3673 GN=LOC111011210 PE=3 SV=1	[more]
A0A5A7SXJ2	2.9e-121	86.92	Auxin response factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CVN1	2.9e-121	86.92	Auxin response factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CKC2	2.9e-121	86.92	Auxin response factor OS=Cucumis melo OX=3656 GN=LOC103501935 PE=3 SV=1	[more]

BLAST of MS005057 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60450.1	3.2e-104	73.15	auxin response factor 4	[more]
AT2G33860.1	2.1e-79	56.64	Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-relat...	[more]
AT1G59750.1	7.3e-77	54.88	auxin response factor 1	[more]
AT1G59750.2	7.3e-77	54.88	auxin response factor 1	[more]
AT1G59750.3	7.3e-77	54.88	auxin response factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 103..205 e-value: 2.9E-23 score: 93.3
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 103..204 e-value: 1.4E-21 score: 76.3
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 103..205 score: 12.8866
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 101..203 e-value: 1.25052E-24 score: 92.0056
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 101..205 e-value: 6.6E-46 score: 156.5
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 95..214
IPR044835	Auxin response factor	PANTHER	PTHR31384	AUXIN RESPONSE FACTOR 4-RELATED	coord: 1..246
None	No IPR available	PANTHER	PTHR31384:SF105	AUXIN RESPONSE FACTOR	coord: 1..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS005057.1	MS005057.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009725	response to hormone
molecular_function	GO:0003677	DNA binding