MS004896 (gene) Bitter gourd (TR) v1

Overview


Name	MS004896
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Endoplasmic reticulum transmembrane protein
Location	scaffold176: 1271523 .. 1273075 (+)
RNA-Seq Expression	MS004896
Synteny	MS004896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCAACTTCTGTTCACAGTAATCGCAGCCGAAATGGCTCTGATTTTGACCCTTCTCTTCAGGACGCCTCTGAGGAAGCTCGTGATTTTGAGTTTGGATCGTGTTAAGCGCGGAAAAGGTCCAATCGTCGTTCAGACCATCGCTGGAACCGTCTTCGTCGTCCTTCTCTCTAGCGTCTATAGCATGGTTAAGATCCAGAACCGTATGATCGAGGCTGGCGAGGTTAATCCCACGGATCAGGTCCTTATGTCCAGTCACTTGCTCGAAGCTTCTCTCATGGGTAATTAACCTCTCTCGACTTCCTTTTTATCTTTTAATTTGTTTTTGCATCTCCCTCTCGCTCTCTGGCTAGGGTTATCAACGGGAGCGCTACCTTTTTCTGTCAATTTTAAGGCGAATGTGTTGCTTATGCTTATTTTATGATTCGAGAGTTGATTAGTTGCGGAATTACTGGCTTTACAAGCATCTGAGCTAGTTGGATTCGACAAAACTGGACTTACTTTTTTCATGTTTACTCTAAAATTTGAAGAAAGCAGTGGGTTATAGTTCGATTCAATGGTTGTGATTTGACATTACTCCTTTTACTAAAATTAAACTTCACTTTATGTGGGCTTCTTCATATGACAAGATCAAACTATCAAATCTACAATTTGGCTCGCTCGCTTCTAGATTGCTTATAAATACATATGTAAATGTATTTTCCTAATCAATAATGGTAGAAAAGCCTCATAAATGCGAATGGATTTGGTGCTTACTTATGGTGGAATTCAGCTTGTACATCGTGTACCTGTATTAACGGTGTGTTTGGAAATGTGGTGGAATATCATTTTGAAGGAAATTTCTTCGAAAGCATTTCGGCATAACTCGTAGGAGCATGTGAAAATAATATTATTCTGAATAGTTGATGACAATAGATGGGGGTTTGAATTTTGAAGCCTAAGTTTTCTGTTCTTATCTTATTTTCTTTGTTTGATAAACTAGATTTTACAATTTCTCCCAAGGACTGCAAACTTCTGGCTGATGAAAGATCTTGTTTTGTCACGACCTTACTCGAATAGGATGTGTTCTATAAGCTGTACAATCTTTTTCTTGTGTTCTAAATAATGATTTTGTTTTGTACTTCCATTTGCTTGCAATTTAGCAGTTTTTCCCCATTTTTTTGTTGAGTACTCATGTTGAAAACAACATTTTATCTCCTGGCAGGGTTTTTGCTGTTCCTTGCGCTGATGATTGATAGACTACATCATTACATCCGTGAGCTTCGGATGCTCAGGAAGACCATGGAGATCGCAAAGAAGCAAATTCGAGCGTCAGAGGATGCAAGTGCAGAGAAGCTTAAAGGCCTGGGAGAAGAGGTAACTACCTTGAGGAATAAAATAACCAAACTGGAATCTGAAGTTGAGGCAAAAACAAAAGAAGCAAATGATGCTGAAGCTGGAACAGAGGCCCTAAGAAAGCAATCTGAGGAGTACCTGCTCGAGTATGATCGATTGCTGGAGGACAATCAGAATCTTCGAAATCAGCTGGAGTCGATCGAACATGGCTCTTCA

mRNA sequence

ATGATTCAACTTCTGTTCACAGTAATCGCAGCCGAAATGGCTCTGATTTTGACCCTTCTCTTCAGGACGCCTCTGAGGAAGCTCGTGATTTTGAGTTTGGATCGTGTTAAGCGCGGAAAAGGTCCAATCGTCGTTCAGACCATCGCTGGAACCGTCTTCGTCGTCCTTCTCTCTAGCGTCTATAGCATGGTTAAGATCCAGAACCGTATGATCGAGGCTGGCGAGGTTAATCCCACGGATCAGGTCCTTATGTCCAGTCACTTGCTCGAAGCTTCTCTCATGGGGTTTTTGCTGTTCCTTGCGCTGATGATTGATAGACTACATCATTACATCCGTGAGCTTCGGATGCTCAGGAAGACCATGGAGATCGCAAAGAAGCAAATTCGAGCGTCAGAGGATGCAAGTGCAGAGAAGCTTAAAGGCCTGGGAGAAGAGGTAACTACCTTGAGGAATAAAATAACCAAACTGGAATCTGAAGTTGAGGCAAAAACAAAAGAAGCAAATGATGCTGAAGCTGGAACAGAGGCCCTAAGAAAGCAATCTGAGGAGTACCTGCTCGAGTATGATCGATTGCTGGAGGACAATCAGAATCTTCGAAATCAGCTGGAGTCGATCGAACATGGCTCTTCA

Coding sequence (CDS)

ATGATTCAACTTCTGTTCACAGTAATCGCAGCCGAAATGGCTCTGATTTTGACCCTTCTCTTCAGGACGCCTCTGAGGAAGCTCGTGATTTTGAGTTTGGATCGTGTTAAGCGCGGAAAAGGTCCAATCGTCGTTCAGACCATCGCTGGAACCGTCTTCGTCGTCCTTCTCTCTAGCGTCTATAGCATGGTTAAGATCCAGAACCGTATGATCGAGGCTGGCGAGGTTAATCCCACGGATCAGGTCCTTATGTCCAGTCACTTGCTCGAAGCTTCTCTCATGGGGTTTTTGCTGTTCCTTGCGCTGATGATTGATAGACTACATCATTACATCCGTGAGCTTCGGATGCTCAGGAAGACCATGGAGATCGCAAAGAAGCAAATTCGAGCGTCAGAGGATGCAAGTGCAGAGAAGCTTAAAGGCCTGGGAGAAGAGGTAACTACCTTGAGGAATAAAATAACCAAACTGGAATCTGAAGTTGAGGCAAAAACAAAAGAAGCAAATGATGCTGAAGCTGGAACAGAGGCCCTAAGAAAGCAATCTGAGGAGTACCTGCTCGAGTATGATCGATTGCTGGAGGACAATCAGAATCTTCGAAATCAGCTGGAGTCGATCGAACATGGCTCTTCA

Protein sequence

MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSVYSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKTMEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQSEEYLLEYDRLLEDNQNLRNQLESIEHGSS

Homology

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BLAST of MS004896 vs. NCBI nr
Match: XP_022140735.1 (B-cell receptor-associated protein 31 [Momordica charantia])

HSP 1 Score: 370.5 bits (950), Expect = 9.3e-99
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT
Sbjct: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120

Query: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQ 180
           MEIAKKQIRASEDASAEKLKGLGEEVTTLRN+ITKLESEVEAKTKEANDAEAGTEALRKQ
Sbjct: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNRITKLESEVEAKTKEANDAEAGTEALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 211
           SEEYLLEYDRLLEDNQNLRNQLESIEHGSS
Sbjct: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 210

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BLAST of MS004896 vs. NCBI nr
Match: XP_022944620.1 (B-cell receptor-associated protein 31-like [Cucurbita moschata] >KAG7010741.1 hypothetical protein SDJN02_27537 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.4 bits (908), Expect = 6.9e-94
Identity = 199/210 (94.76%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVL+SSV
Sbjct: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YSMVKIQNRMIEAGEVNPTDQVLMS+HLLEASLMGFLLFLALMIDRLHHYIRELR+LRKT
Sbjct: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQ 180
           ME+AKKQIRASEDASAEKLK LGEE TTLR+KITKLE+EVEAKTKEAN AEA TEALRKQ
Sbjct: 121 MEVAKKQIRASEDASAEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 211
           SEEYLLEYDRLLEDNQN+RNQLESIEHGSS
Sbjct: 181 SEEYLLEYDRLLEDNQNIRNQLESIEHGSS 210

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BLAST of MS004896 vs. NCBI nr
Match: XP_038900406.1 (B-cell receptor-associated protein 31 [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 2.0e-93
Identity = 197/210 (93.81%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAA+MALILTLLFRTPLRKLVILSLDR+KRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YSMVKIQNRM+EAGEVNPTDQVLMS+HLLEASLMGFLLFLALMIDRLHHYIRELR+LRKT
Sbjct: 61  YSMVKIQNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQ 180
           ME+AKKQIRASEDASAEKLK LGEE  TLRNKITKLESEVE KTKEANDAEA T+ALRKQ
Sbjct: 121 MEVAKKQIRASEDASAEKLKALGEEAITLRNKITKLESEVEIKTKEANDAEAETDALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 211
           SEEYLLEYDRLLEDNQNLRNQLE+IEHGSS
Sbjct: 181 SEEYLLEYDRLLEDNQNLRNQLETIEHGSS 210

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BLAST of MS004896 vs. NCBI nr
Match: XP_023513327.1 (B-cell receptor-associated protein 31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.8 bits (904), Expect = 2.0e-93
Identity = 198/210 (94.29%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVL+SSV
Sbjct: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YSMVKIQNRMIEAGEVNPTDQVLMS+HLLEASLMGFLLFLALMIDRLHHYIRELR+LRKT
Sbjct: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQ 180
           ME+AKKQIRASEDAS EKLK LGEE TTLR+KITKLE+EVEAKTKEAN AEA TEALRKQ
Sbjct: 121 MEVAKKQIRASEDASTEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 211
           SEEYLLEYDRLLEDNQN+RNQLESIEHGSS
Sbjct: 181 SEEYLLEYDRLLEDNQNIRNQLESIEHGSS 210

[Close]

BLAST of MS004896 vs. NCBI nr
Match: XP_022986382.1 (B-cell receptor-associated protein 31-like [Cucurbita maxima])

HSP 1 Score: 352.8 bits (904), Expect = 2.0e-93
Identity = 198/210 (94.29%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVL+SSV
Sbjct: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YSMVKIQNRMIEAGEVNPTDQVLMS+HLLEASLMGFLLFLALMIDRLHHYIRELR+LRKT
Sbjct: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQ 180
           ME+AKKQIRASEDAS EKLK LGEE TTLR+KITKLE+EVEAKTKEAN AEA TEALRKQ
Sbjct: 121 MEVAKKQIRASEDASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 211
           SEEYLLEYDRLLEDNQN+RNQLESIEHGSS
Sbjct: 181 SEEYLLEYDRLLEDNQNIRNQLESIEHGSS 210

[Close]

BLAST of MS004896 vs. ExPASy TrEMBL
Match: A0A6J1CFZ2 (Endoplasmic reticulum transmembrane protein OS=Momordica charantia OX=3673 GN=LOC111011325 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.5e-99
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT
Sbjct: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120

Query: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQ 180
           MEIAKKQIRASEDASAEKLKGLGEEVTTLRN+ITKLESEVEAKTKEANDAEAGTEALRKQ
Sbjct: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNRITKLESEVEAKTKEANDAEAGTEALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 211
           SEEYLLEYDRLLEDNQNLRNQLESIEHGSS
Sbjct: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 210

[Close]

BLAST of MS004896 vs. ExPASy TrEMBL
Match: A0A6J1FYS2 (Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC111449028 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.3e-94
Identity = 199/210 (94.76%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVL+SSV
Sbjct: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YSMVKIQNRMIEAGEVNPTDQVLMS+HLLEASLMGFLLFLALMIDRLHHYIRELR+LRKT
Sbjct: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQ 180
           ME+AKKQIRASEDASAEKLK LGEE TTLR+KITKLE+EVEAKTKEAN AEA TEALRKQ
Sbjct: 121 MEVAKKQIRASEDASAEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 211
           SEEYLLEYDRLLEDNQN+RNQLESIEHGSS
Sbjct: 181 SEEYLLEYDRLLEDNQNIRNQLESIEHGSS 210

[Close]

BLAST of MS004896 vs. ExPASy TrEMBL
Match: A0A6J1J7E1 (Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC111484135 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 9.7e-94
Identity = 198/210 (94.29%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVL+SSV
Sbjct: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YSMVKIQNRMIEAGEVNPTDQVLMS+HLLEASLMGFLLFLALMIDRLHHYIRELR+LRKT
Sbjct: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQ 180
           ME+AKKQIRASEDAS EKLK LGEE TTLR+KITKLE+EVEAKTKEAN AEA TEALRKQ
Sbjct: 121 MEVAKKQIRASEDASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 211
           SEEYLLEYDRLLEDNQN+RNQLESIEHGSS
Sbjct: 181 SEEYLLEYDRLLEDNQNIRNQLESIEHGSS 210

[Close]

BLAST of MS004896 vs. ExPASy TrEMBL
Match: A0A5A7SZN8 (Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00450 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.4e-92
Identity = 195/210 (92.86%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAA+MALILTLLFRTPLRKLVI SLDR+KRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 45  MIQLLFTVIAAQMALILTLLFRTPLRKLVIFSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 104

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YSM+KIQNRM+EAGEVNPTDQVLMS+HLLEASLMGFLLFLALMIDRLHHYIRELR+LRKT
Sbjct: 105 YSMLKIQNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 164

Query: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQ 180
           ME+AKKQIRASEDASAEKLK LGEE TTLRNKITKLESEVE KTKEANDAEA T+ALRKQ
Sbjct: 165 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESEVEVKTKEANDAEAETDALRKQ 224

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 211
           S EYLLEYDRLLEDNQNLRNQLESIEH SS
Sbjct: 225 SGEYLLEYDRLLEDNQNLRNQLESIEHASS 254

[Close]

BLAST of MS004896 vs. ExPASy TrEMBL
Match: A0A5D3BQF4 (Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00170 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.1e-92
Identity = 194/210 (92.38%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAA+MALILTLLFRTPLRKLVI SLDR+KRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 60  MIQLLFTVIAAQMALILTLLFRTPLRKLVIFSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 119

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YSM+KIQNRM+EAGEVNPTDQVLMS+HLLEASLMGFLLFLALMIDRLHHYIRELR+LRKT
Sbjct: 120 YSMLKIQNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 179

Query: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEALRKQ 180
           ME+AKKQIRASEDASAEKLK LGEE TTL+NKITKLESEVE KTKEANDAEA T+ALRKQ
Sbjct: 180 MEVAKKQIRASEDASAEKLKALGEEATTLKNKITKLESEVEVKTKEANDAEAETDALRKQ 239

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 211
           S EYLLEYDRLLEDNQNLRNQLESIEH SS
Sbjct: 240 SGEYLLEYDRLLEDNQNLRNQLESIEHASS 269

[Close]

BLAST of MS004896 vs. TAIR 10
Match: AT5G42570.1 (B-cell receptor-associated 31-like )

HSP 1 Score: 255.4 bits (651), Expect = 4.1e-68
Identity = 146/210 (69.52%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           MI LL+TVI AEMALIL LLF+TPLRKL+IL+ DR+KRG+GP+VV+TI  TVFVVLLSS+
Sbjct: 1   MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           YS+V IQ R  +   +NPTDQVL S HLLEASLMGF+LFL+LMIDRLHHYIRELR+LRKT
Sbjct: 61  YSLVNIQRRSEDGAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLRKT 120

Query: 121 MEIAKKQIRASED---ASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEAL 180
           ME AKKQ R  ED    S E++K LGEE+  L+ KI  LESE E+K KE   A+  TEAL
Sbjct: 121 METAKKQNRGFEDGKTTSGEEVKALGEEIAALKAKIKTLESESESKGKELKGAQGETEAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNLRNQLESIEH 208
           RKQ++ +L+EYDRLLEDNQNLRNQLESI H
Sbjct: 181 RKQADGFLMEYDRLLEDNQNLRNQLESIGH 210

[Close]

BLAST of MS004896 vs. TAIR 10
Match: AT1G11905.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-51
Identity = 112/209 (53.59%), Postives = 161/209 (77.03%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           M QLLF V+  E+ +I+ L F+TP+RKL+I+SLDR KRG+GP+V+QT++ TV V+L++SV
Sbjct: 1   MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           Y+M+ IQ R IE G VNPTD+V+M+ HLLE++LMG  LFL LMIDRLHHY+RELR+ RK 
Sbjct: 61  YNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLMGGFLFLGLMIDRLHHYMRELRIRRKN 120

Query: 121 MEIAKKQIRASEDASA---EKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEAL 180
           ME+ KK+    E   A   +++K L EE+T+LR +  +L+SE+EA++KE    +    AL
Sbjct: 121 MEVIKKEGALLEGVKARGLDEVKNLMEEITSLRKRQEQLDSELEARSKEIRTEKTSAVAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNLRNQLESIE 207
           +KQSE +L+E++RLLE+NQ LR+QL +++
Sbjct: 181 QKQSEGFLIEFNRLLEENQVLRDQLHTVD 209

[Close]

BLAST of MS004896 vs. TAIR 10
Match: AT1G11905.2 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 181.8 bits (460), Expect = 5.7e-46
Identity = 106/209 (50.72%), Postives = 158/209 (75.60%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60
           M QLLF V+  E+ +I+ L F+TP+RKL+I+SLDR KRG+GP+V+QT++ TV V+L++SV
Sbjct: 1   MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120
           Y+M+ IQ R IE G VNPTD+V+M+ HLLE++LM  +L L L++  LHHY+RELR+ RK 
Sbjct: 61  YNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLMVRVLELCLLL-WLHHYMRELRIRRKN 120

Query: 121 MEIAKKQIRASEDASA---EKLKGLGEEVTTLRNKITKLESEVEAKTKEANDAEAGTEAL 180
           ME+ KK+    E   A   +++K L EE+T+LR +  +L+SE+EA++KE    +    AL
Sbjct: 121 MEVIKKEGALLEGVKARGLDEVKNLMEEITSLRKRQEQLDSELEARSKEIRTEKTSAVAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNLRNQLESIE 207
           +KQSE +L+E++RLLE+NQ LR+QL +++
Sbjct: 181 QKQSEGFLIEFNRLLEENQVLRDQLHTVD 208

[Close]

BLAST of MS004896 vs. TAIR 10
Match: AT5G48660.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 158.3 bits (399), Expect = 6.7e-39
Identity = 98/213 (46.01%), Postives = 148/213 (69.48%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRT-PLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSS 60
           MIQLLF V+  E A+   LL +  PLR+LVI SLD++K GKGP  V+TIAGT+ V+L S+
Sbjct: 1   MIQLLFLVLFVEGAIAFLLLIKIGPLRELVIKSLDQMKMGKGPATVKTIAGTMSVILFSN 60

Query: 61  VYSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRK 120
           + S+VKIQN+  + G ++P DQVL  +HLLEASL+G +LFL  +IDR+HHY+R+L  LR 
Sbjct: 61  LMSIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLLGVVLFLGFIIDRMHHYLRKLINLRS 120

Query: 121 TMEIAKK----------QIRASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEAND 180
            +  +K+          +++  E+ +++++K L  +++++  ++ K E+E + K K+   
Sbjct: 121 NVGSSKEELEQLQKERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLET 180

Query: 181 AEAGTEALRKQSEEYLLEYDRLLEDNQNLRNQL 203
           AE    AL+KQS E LLEYDRLLEDNQ+L++Q+
Sbjct: 181 AETHVTALQKQSAELLLEYDRLLEDNQHLQSQI 213

[Close]

BLAST of MS004896 vs. TAIR 10
Match: AT3G07190.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 152.5 bits (384), Expect = 3.7e-37
Identity = 98/213 (46.01%), Postives = 145/213 (68.08%), Query Frame = 0


Query: 1   MIQLLFTVIAAEMALILTLLFRT-PLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSS 60
           MIQLLF V+  E A+   LL +  PLR+LV+ SLD++K GK P  ++TIAGT+ V+LLS+
Sbjct: 1   MIQLLFLVLFVEGAIAFLLLVKIGPLRELVMKSLDQLKLGKRPATLKTIAGTMSVILLSN 60

Query: 61  VYSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRK 120
           + +++KIQN+  + G ++P DQVL  +HLLEASLMG +LF   +IDR HHY+ +L  LR 
Sbjct: 61  LMNIIKIQNKGAKLGTMSPMDQVLWRTHLLEASLMGVVLFFGFIIDRTHHYLEKLITLRS 120

Query: 121 TM--------EIAKKQI--RASEDASAEKLKGLGEEVTTLRNKITKLESEVEAKTKEAND 180
            +        E+ K++I  +  E+ +++++K L E+++ +   + KLE E + K  +   
Sbjct: 121 NVGSSKGELEELRKERIELKEKEEKTSKEIKQLKEKLSCVSENLKKLEKESKEKETKLET 180

Query: 181 AEAGTEALRKQSEEYLLEYDRLLEDNQNLRNQL 203
           AEA   AL+KQS E LLEYDRLLEDNQNL++Q+
Sbjct: 181 AEAHVTALQKQSSELLLEYDRLLEDNQNLQSQI 213

The following BLAST results are available for this feature:

BLAST of MS004896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140735.1	9.3e-99	99.52	B-cell receptor-associated protein 31 [Momordica charantia]	[more]
XP_022944620.1	6.9e-94	94.76	B-cell receptor-associated protein 31-like [Cucurbita moschata] >KAG7010741.1 hy...	[more]
XP_038900406.1	2.0e-93	93.81	B-cell receptor-associated protein 31 [Benincasa hispida]	[more]
XP_023513327.1	2.0e-93	94.29	B-cell receptor-associated protein 31-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986382.1	2.0e-93	94.29	B-cell receptor-associated protein 31-like [Cucurbita maxima]	[more]

BLAST of MS004896 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS004896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFZ2	4.5e-99	99.52	Endoplasmic reticulum transmembrane protein OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1FYS2	3.3e-94	94.76	Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1J7E1	9.7e-94	94.29	Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5A7SZN8	1.4e-92	92.86	Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3BQF4	3.1e-92	92.38	Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of MS004896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42570.1	4.1e-68	69.52	B-cell receptor-associated 31-like	[more]
AT1G11905.1	1.2e-51	53.59	B-cell receptor-associated protein 31-like	[more]
AT1G11905.2	5.7e-46	50.72	B-cell receptor-associated protein 31-like	[more]
AT5G48660.1	6.7e-39	46.01	B-cell receptor-associated protein 31-like	[more]
AT3G07190.1	3.7e-37	46.01	B-cell receptor-associated protein 31-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..134
None	No IPR available	COILS	Coil	Coil	coord: 139..208
None	No IPR available	GENE3D	1.20.5.110		coord: 135..198 e-value: 6.1E-12 score: 47.3
None	No IPR available	PANTHER	PTHR12701:SF40	SUBFAMILY NOT NAMED	coord: 1..207
IPR008417	B-cell receptor-associated protein 29/31	PANTHER	PTHR12701	BCR-ASSOCIATED PROTEIN, BAP	coord: 1..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004896.1	MS004896.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane