Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAACTGCTTGAGGAGCAACAGAGTGATGGCGCAGGATGAGGCTTGTTCGCCTTCGCCTAATTCGTCTTTGACAGAAACTAATTACAAAGTGGAAGATAAACCAGCCGCCGGATCGGCGCTGGCGCGGCCGAAGACGGAGGAGGCGAGAATCGCCGCGCGAGGTAAGAAGGTTGTGAGGTTTCAGCTACGAGAAGATGAAATTTCAGGCGGCGGAGGCGGAGGCGGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCGCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAAAGCAATTCCTCCACATTGGAGGAATTGTTAGCTGAATTGAAGATGAAAGGCAGGACAATTTCAGATGCTAGAGCCGATAAAGAGGAGGATGAAAATGGAAGCTGGAGACCGGCCTTGGAAAGCATTCCTGAAGATCTCCAT
mRNA sequence
ATGGGGAACTGCTTGAGGAGCAACAGAGTGATGGCGCAGGATGAGGCTTGTTCGCCTTCGCCTAATTCGTCTTTGACAGAAACTAATTACAAAGTGGAAGATAAACCAGCCGCCGGATCGGCGCTGGCGCGGCCGAAGACGGAGGAGGCGAGAATCGCCGCGCGAGGTAAGAAGGTTGTGAGGTTTCAGCTACGAGAAGATGAAATTTCAGGCGGCGGAGGCGGAGGCGGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCGCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAAAGCAATTCCTCCACATTGGAGGAATTGTTAGCTGAATTGAAGATGAAAGGCAGGACAATTTCAGATGCTAGAGCCGATAAAGAGGAGGATGAAAATGGAAGCTGGAGACCGGCCTTGGAAAGCATTCCTGAAGATCTCCAT
Coding sequence (CDS)
ATGGGGAACTGCTTGAGGAGCAACAGAGTGATGGCGCAGGATGAGGCTTGTTCGCCTTCGCCTAATTCGTCTTTGACAGAAACTAATTACAAAGTGGAAGATAAACCAGCCGCCGGATCGGCGCTGGCGCGGCCGAAGACGGAGGAGGCGAGAATCGCCGCGCGAGGTAAGAAGGTTGTGAGGTTTCAGCTACGAGAAGATGAAATTTCAGGCGGCGGAGGCGGAGGCGGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCGCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAAAGCAATTCCTCCACATTGGAGGAATTGTTAGCTGAATTGAAGATGAAAGGCAGGACAATTTCAGATGCTAGAGCCGATAAAGAGGAGGATGAAAATGGAAGCTGGAGACCGGCCTTGGAAAGCATTCCTGAAGATCTCCAT
Protein sequence
MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTISDARADKEEDENGSWRPALESIPEDLH
Homology
BLAST of MS004887 vs. NCBI nr
Match:
XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia])
HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65
Identity = 139/147 (94.56%), Postives = 140/147 (95.24%), Query Frame = 0
Query: 1 MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVV 60
MGNCLR+NRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAAR KKVV
Sbjct: 43 MGNCLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVV 102
Query: 61 RFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTI 120
RFQ REDEIS GGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTI
Sbjct: 103 RFQQREDEIS----GGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTI 162
Query: 121 SDARADKEEDENGSWRPALESIPEDLH 148
SDARAD EEDENGSWRPALESIPEDLH
Sbjct: 163 SDARADNEEDENGSWRPALESIPEDLH 185
BLAST of MS004887 vs. NCBI nr
Match:
KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 161.0 bits (406), Expect = 7.8e-36
Identity = 97/153 (63.40%), Postives = 118/153 (77.12%), Query Frame = 0
Query: 1 MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARI-AARGKK 60
MGN C +SN+VMAQDE+C NS E KVE+KP AGSA+A+PKT E R AA GKK
Sbjct: 1 MGNSCFKSNKVMAQDESCLALSNSPPVEAK-KVEEKPVAGSAMAKPKTAEERSGAAAGKK 60
Query: 61 VVRFQLREDEISGGGGGGGG---GVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKM 120
VVRF+L+E++ + GG GG G GVLRIKVV+SQ+ELKQILK+ E++S +LEEL+AE K+
Sbjct: 61 VVRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKV 120
Query: 121 KGR-TISDARADKEEDENGSWRPALESIPEDLH 148
KGR T+SDA D+ EDENGS RPALE IPE LH
Sbjct: 121 KGRTTVSDAITDEVEDENGSRRPALECIPEGLH 152
BLAST of MS004887 vs. NCBI nr
Match:
XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida])
HSP 1 Score: 149.8 bits (377), Expect = 1.8e-32
Identity = 89/144 (61.81%), Postives = 103/144 (71.53%), Query Frame = 0
Query: 3 NCLRSNRVMAQDEACSPSPNSSLTETN-YKVEDKPAAGSALARPKTEEARIAARGKKVVR 62
NC +SN+VMAQDE P L KVE+KP GSA+A+PKT EAR KKVVR
Sbjct: 4 NCFKSNKVMAQDE-----PEDLLPPIEAKKVEEKPRPGSAMAKPKTAEARTGGASKKVVR 63
Query: 63 FQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGR-TI 122
F+L+E+E G GGVLRIKVV+SQKELKQ+LKDRE+NS TLEEL+ ELK+KGR TI
Sbjct: 64 FKLQEEEEK---NSGDGGVLRIKVVMSQKELKQMLKDRENNSCTLEELITELKVKGRTTI 123
Query: 123 SDARADKEEDENGSWRPALESIPE 145
SD R D EDENG W+P LE IPE
Sbjct: 124 SDGRIDAVEDENGRWKPDLEGIPE 139
BLAST of MS004887 vs. NCBI nr
Match:
KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus])
HSP 1 Score: 125.6 bits (314), Expect = 3.6e-25
Identity = 81/148 (54.73%), Postives = 97/148 (65.54%), Query Frame = 0
Query: 1 MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKV 60
MGN C +SN+VMAQD++ P L E KV+ +P GSA+A+PK A GKKV
Sbjct: 1 MGNICFKSNKVMAQDDSYDDFPPHHLIEPK-KVQQQPLPGSAMAKPKNGTG--GAAGKKV 60
Query: 61 VRFQLRE---DEISGGGGGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMK 120
VRF L+E DE G G GVLRIKVV+SQKELKQILK RE+NS +LEEL+ ELK+K
Sbjct: 61 VRFNLQEEEKDEEGRNSGDSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVK 120
Query: 121 GRTISDARADKEEDENGSWRPALESIPE 145
GR + DE GSW+PALE IPE
Sbjct: 121 GRATT-----VSADETGSWKPALECIPE 140
BLAST of MS004887 vs. NCBI nr
Match:
TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa])
HSP 1 Score: 121.7 bits (304), Expect = 5.3e-24
Identity = 83/156 (53.21%), Postives = 101/156 (64.74%), Query Frame = 0
Query: 1 MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKP-AAGSALARPKTEEARIAARGKK 60
MGN C R+N+VMAQD++ P E KVE++P GSA+A+PK A GKK
Sbjct: 1 MGNICFRTNKVMAQDDSYDNLPPDQFIEAE-KVEEQPLRPGSAMAKPKNGTG--GAAGKK 60
Query: 61 VVRFQLREDEIS----GGGGGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELK 120
VVRF L+E+E G G GVLRIKVV+SQKELK+ILK+RE+NS +LEEL+ ELK
Sbjct: 61 VVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELK 120
Query: 121 MKGRTISDARADKEEDENGSWRPALESIPE---DLH 148
+KG RA DE GSW+PALE IPE DLH
Sbjct: 121 VKG------RATTVSDEIGSWKPALECIPEGEGDLH 147
BLAST of MS004887 vs. ExPASy TrEMBL
Match:
A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1)
HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 139/147 (94.56%), Postives = 140/147 (95.24%), Query Frame = 0
Query: 1 MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVV 60
MGNCLR+NRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAAR KKVV
Sbjct: 43 MGNCLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVV 102
Query: 61 RFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTI 120
RFQ REDEIS GGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTI
Sbjct: 103 RFQQREDEIS----GGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTI 162
Query: 121 SDARADKEEDENGSWRPALESIPEDLH 148
SDARAD EEDENGSWRPALESIPEDLH
Sbjct: 163 SDARADNEEDENGSWRPALESIPEDLH 185
BLAST of MS004887 vs. ExPASy TrEMBL
Match:
A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 1.8e-25
Identity = 81/148 (54.73%), Postives = 97/148 (65.54%), Query Frame = 0
Query: 1 MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKV 60
MGN C +SN+VMAQD++ P L E KV+ +P GSA+A+PK A GKKV
Sbjct: 1 MGNICFKSNKVMAQDDSYDDFPPHHLIEPK-KVQQQPLPGSAMAKPKNGTG--GAAGKKV 60
Query: 61 VRFQLRE---DEISGGGGGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMK 120
VRF L+E DE G G GVLRIKVV+SQKELKQILK RE+NS +LEEL+ ELK+K
Sbjct: 61 VRFNLQEEEKDEEGRNSGDSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVK 120
Query: 121 GRTISDARADKEEDENGSWRPALESIPE 145
GR + DE GSW+PALE IPE
Sbjct: 121 GRATT-----VSADETGSWKPALECIPE 140
BLAST of MS004887 vs. ExPASy TrEMBL
Match:
A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 2.5e-24
Identity = 83/156 (53.21%), Postives = 101/156 (64.74%), Query Frame = 0
Query: 1 MGN-CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKP-AAGSALARPKTEEARIAARGKK 60
MGN C R+N+VMAQD++ P E KVE++P GSA+A+PK A GKK
Sbjct: 1 MGNICFRTNKVMAQDDSYDNLPPDQFIEAE-KVEEQPLRPGSAMAKPKNGTG--GAAGKK 60
Query: 61 VVRFQLREDEIS----GGGGGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELK 120
VVRF L+E+E G G GVLRIKVV+SQKELK+ILK+RE+NS +LEEL+ ELK
Sbjct: 61 VVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELK 120
Query: 121 MKGRTISDARADKEEDENGSWRPALESIPE---DLH 148
+KG RA DE GSW+PALE IPE DLH
Sbjct: 121 VKG------RATTVSDEIGSWKPALECIPEGEGDLH 147
BLAST of MS004887 vs. ExPASy TrEMBL
Match:
A0A7N2MA05 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 88.6 bits (218), Expect = 2.4e-14
Identity = 66/150 (44.00%), Postives = 91/150 (60.67%), Query Frame = 0
Query: 1 MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKKVV 60
MGNCL SN+ +AQ+E E + KP+ S L K + + KKVV
Sbjct: 1 MGNCL-SNKSLAQEEEVP-------KEAEVVEQTKPSTASKLEPVKLVDGG-HKKKKKVV 60
Query: 61 RFQLREDEISGGGGGGG---GGVLRIKVVVSQKELKQILKDRES-NSSTLEELLAELKMK 120
RF+L ED+ + G G GV+RI+VVV+QKELKQIL +E S++E+L+ L ++
Sbjct: 61 RFKLEEDDTNVGTSSEGDSRSGVVRIRVVVTQKELKQILDCKEGLKYSSVEQLVNALNLR 120
Query: 121 GRTISDAR-ADKEEDENGSWRPALESIPED 146
GR IS+ R +D++E N +WRPALESIPED
Sbjct: 121 GRKISEVRTSDEDEGINSNWRPALESIPED 141
BLAST of MS004887 vs. ExPASy TrEMBL
Match:
A0A6J1B1M6 (uncharacterized protein LOC110423293 OS=Herrania umbratica OX=108875 GN=LOC110423293 PE=4 SV=1)
HSP 1 Score: 86.3 bits (212), Expect = 1.2e-13
Identity = 63/155 (40.65%), Postives = 92/155 (59.35%), Query Frame = 0
Query: 1 MGNCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAA------ 60
MGNCL SN+++AQ++ P P E +E+ + K E A +AA
Sbjct: 1 MGNCLTSNKIVAQND--QPEPQGCRAEV---IEET----GKVTASKLERAEVAADEGEKV 60
Query: 61 RGKKVVRFQLREDEISGGG--GGGGGGVLRIKVVVSQKELKQILKDRES-NSSTLEELLA 120
+ KK+VRF+L E+ GG G GV+RI++VV+QKELKQIL RE ++LE L+
Sbjct: 61 KKKKMVRFKLNEENDVDGGRQGESKDGVVRIRLVVTQKELKQILSSREDLKHTSLEGLIR 120
Query: 121 ELKMKGRTISD-ARADKEEDENGSWRPALESIPED 146
+K++G IS+ R + ++ +G WRPALESIPE+
Sbjct: 121 VMKLRGVRISEGGRTNDDDGFHGGWRPALESIPEE 146
BLAST of MS004887 vs. TAIR 10
Match:
AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 55.5 bits (132), Expect = 4.3e-08
Identity = 51/148 (34.46%), Postives = 70/148 (47.30%), Query Frame = 0
Query: 1 MGNCLRSNRVMAQDEA--CSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARGKK 60
MGNCLR + +A+ E P P L E G R + E R K
Sbjct: 1 MGNCLRHDNGVARKEKDDLDPEPLVKLLE----------EGKTSFRGEEESERSTEEESK 60
Query: 61 VVRFQLREDEISGGGGGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGR 120
VV RIKVVV++KEL+QIL ++ +++++L+ LK GR
Sbjct: 61 VV---------------------RIKVVVTKKELRQIL-GHKNGINSIQQLVHVLKDSGR 116
Query: 121 TISDARADKEEDENG--SWRPALESIPE 145
IS A +++E E G +WRP LESIPE
Sbjct: 121 NISMASYEEDEKEEGDENWRPTLESIPE 116
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022140639.1 | 2.8e-65 | 94.56 | uncharacterized protein LOC111011249 [Momordica charantia] | [more] |
KAG6570883.1 | 7.8e-36 | 63.40 | hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_038902397.1 | 1.8e-32 | 61.81 | uncharacterized protein LOC120089037 [Benincasa hispida] | [more] |
KGN63254.1 | 3.6e-25 | 54.73 | hypothetical protein Csa_022493 [Cucumis sativus] | [more] |
TYK24218.1 | 5.3e-24 | 53.21 | hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CG85 | 1.3e-65 | 94.56 | uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
A0A0A0LQE9 | 1.8e-25 | 54.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1 | [more] |
A0A5D3DKZ8 | 2.5e-24 | 53.21 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A7N2MA05 | 2.4e-14 | 44.00 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A6J1B1M6 | 1.2e-13 | 40.65 | uncharacterized protein LOC110423293 OS=Herrania umbratica OX=108875 GN=LOC11042... | [more] |
Match Name | E-value | Identity | Description | |
AT3G21680.1 | 4.3e-08 | 34.46 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... | [more] |