MS004652 (gene) Bitter gourd (TR) v1

Overview
NameMS004652
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPHD-type domain-containing protein
Locationscaffold564: 398867 .. 400706 (+)
RNA-Seq ExpressionMS004652
SyntenyMS004652
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTGCAGCTATTGCTTACCTACATTGCCAGAAATTCTTCATGAGTATGTTACTTGGTTTTGCGAAGATTGTGAGGCAATAATGGTGCCAGTTATAAATTGTAAAGTTAAATTTAAAAAGAAAAAGCTTGCCAAACGTCTGAAGAAGAAAAAGGTGAAAAAGAAGAAGAATAAAGGTATTGGCTCAATGGCAAAAATCGAGGCACATAAAGGTCAAAGTTGTTCTCCTATTCAACTACCTGAGGCGCAGTGCAGTGAGAAGAATGATGACATGACACCTGGCAGGTCGGGAGAGCCTGTTCGAGAAGATGGGCCGAATCATAGTGAAGCCACTACGTCTGCCATGTCCAATTTCTTAGGACACAACTGTTATGTTGCACAGCCTATAGTAGAGCCTGTCTGGAGGTGAGAGCTTTTCTTTTTGTTTATGTTTAATTTTTTGGTTAAAATCTCATTTTGGTCTCTAAATCTAACTCTAGGTTTGTTCCGTTTTGGTTCCTGAAGGTTCAAAATGTCCATTTAGTCCTTTTAACTTTCTAAAGATAACAATTTTGGTCCTGGAATTTTCAAAATATTAATTTTAGTTCCTAAACTTTCAAAAAGTAACGGTTATGGTCCTTGGTATATATTTTACCACTTTATAATCACTTATCCAATATTCATTTTTGACCTATGTAGTTTGAGTACATGCTCACGCTAGTACATTAATATACATATTTGAAGAACAAATGGTTATTTTTCTTAAGTTCAAGGACAAATGACTTAAATAGATATTTTTAAAGTTTAGGACCAGAGAAGAATTTGAAAGTTTGGAGACTAAAATGAACATTTTGAAAGTTCAAGGACCAAAATGAGATCTAAATGTTAATTTTTTATATTGAATTCGCAACATAAAGTGGTCCAATTGGTATTTTGGTCATGACAGGGGAAGTTTAAGATTTTGGAACAAAAGTTTTGGCAGACTTTGTGTACTTGTTGCCCATATGTCTAGCTTAGCATGCTCAAAAGTGTATGAGGAGGCTAAATTGTTACCTCAGTTACTTTCCGTTGAATTACTTCGTAGATGTGATATATGGCCCAAAGGATTTGAGAAAGTGGGGCCAACTGATCAAAGTATTGCCCTTTATTTCTTTCCAGAAGGTGAAAGGTAATGAATTCTATGCTTCTACTTCCATTTCTCTCTCTCTCTCTCCCCTACTTCGATTAATGTAAATGTATACTTTTTTTTCTCTATGGCAGTAGCGAAAAGGCTTTTGATCTTCTGGTCAATTCAATGATGTGCAAGGATCTAGCCATGAAGGCTGTGCTGAAGAATGCGGAGCTTTTAGTTTTTACTTCGTCCATGTTACCGATGCAGTACTGGAGTAAGTTCGCTTATAATCTTTCCATAATTTTCAGTTTGTTATTTCAGTCTCGGTATATTGAGAATCAGGAAGGCGAATCTGGAATGACTGAGTTTGAAGTCGTAGTTTTTCGAGTTTTTATTGGGTGTATAATTTTTCTCCTAGTAGCCATACAATACGACTAGATTTTAGGAGGTAGAAGAACTCATGAGTGCACGCCTTCTCCTTTGCTGGCAAATTTTTGTGCAATTCATCTAACAATGCCATTTCCAGCATAACTAAAGCACTAAAGCAAATTGATGTGCAGGATTTCAAGCAAGGTACTATTTGTGGGGCGTCTTTCGTGGAAGGCAAGCTTTGCAACAGATAAATAATGTGGCTTCTACGGAGAAAACTTTTTCCGAGTCATTACATTGTATGCAAAGCCCTGTTAGTTCTTTAAGAAACCCCAGTATTCTTCATTCTGTGCCACTACATTCTACTGGCCCTCCTCTGTCG

mRNA sequence

TCTTGCAGCTATTGCTTACCTACATTGCCAGAAATTCTTCATGAGTATGTTACTTGGTTTTGCGAAGATTGTGAGGCAATAATGGTGCCAGTTATAAATTGTAAAGTTAAATTTAAAAAGAAAAAGCTTGCCAAACGTCTGAAGAAGAAAAAGGTGAAAAAGAAGAAGAATAAAGGTATTGGCTCAATGGCAAAAATCGAGGCACATAAAGGTCAAAGTTGTTCTCCTATTCAACTACCTGAGGCGCAGTGCAGTGAGAAGAATGATGACATGACACCTGGCAGGTCGGGAGAGCCTGTTCGAGAAGATGGGCCGAATCATAGTGAAGCCACTACGTCTGCCATGTCCAATTTCTTAGGACACAACTGTTATGTTGCACAGCCTATAGTAGAGCCTGTCTGGAGGGGAAGTTTAAGATTTTGGAACAAAAGTTTTGGCAGACTTTGTGTACTTGTTGCCCATATGTCTAGCTTAGCATGCTCAAAAGTGTATGAGGAGGCTAAATTGTTACCTCAGTTACTTTCCGTTGAATTACTTCGTAGATGTGATATATGGCCCAAAGGATTTGAGAAAGTGGGGCCAACTGATCAAAGTATTGCCCTTTATTTCTTTCCAGAAGGTGAAAGCGAAAAGGCTTTTGATCTTCTGGTCAATTCAATGATGTGCAAGGATCTAGCCATGAAGGCTGTGCTGAAGAATGCGGAGCTTTTAGTTTTTACTTCGTCCATGTTACCGATGCAGTACTGGAGATTTCAAGCAAGGTACTATTTGTGGGGCGTCTTTCGTGGAAGGCAAGCTTTGCAACAGATAAATAATGTGGCTTCTACGGAGAAAACTTTTTCCGAGTCATTACATTGTATGCAAAGCCCTGTTAGTTCTTTAAGAAACCCCAGTATTCTTCATTCTGTGCCACTACATTCTACTGGCCCTCCTCTGTCG

Coding sequence (CDS)

TCTTGCAGCTATTGCTTACCTACATTGCCAGAAATTCTTCATGAGTATGTTACTTGGTTTTGCGAAGATTGTGAGGCAATAATGGTGCCAGTTATAAATTGTAAAGTTAAATTTAAAAAGAAAAAGCTTGCCAAACGTCTGAAGAAGAAAAAGGTGAAAAAGAAGAAGAATAAAGGTATTGGCTCAATGGCAAAAATCGAGGCACATAAAGGTCAAAGTTGTTCTCCTATTCAACTACCTGAGGCGCAGTGCAGTGAGAAGAATGATGACATGACACCTGGCAGGTCGGGAGAGCCTGTTCGAGAAGATGGGCCGAATCATAGTGAAGCCACTACGTCTGCCATGTCCAATTTCTTAGGACACAACTGTTATGTTGCACAGCCTATAGTAGAGCCTGTCTGGAGGGGAAGTTTAAGATTTTGGAACAAAAGTTTTGGCAGACTTTGTGTACTTGTTGCCCATATGTCTAGCTTAGCATGCTCAAAAGTGTATGAGGAGGCTAAATTGTTACCTCAGTTACTTTCCGTTGAATTACTTCGTAGATGTGATATATGGCCCAAAGGATTTGAGAAAGTGGGGCCAACTGATCAAAGTATTGCCCTTTATTTCTTTCCAGAAGGTGAAAGCGAAAAGGCTTTTGATCTTCTGGTCAATTCAATGATGTGCAAGGATCTAGCCATGAAGGCTGTGCTGAAGAATGCGGAGCTTTTAGTTTTTACTTCGTCCATGTTACCGATGCAGTACTGGAGATTTCAAGCAAGGTACTATTTGTGGGGCGTCTTTCGTGGAAGGCAAGCTTTGCAACAGATAAATAATGTGGCTTCTACGGAGAAAACTTTTTCCGAGTCATTACATTGTATGCAAAGCCCTGTTAGTTCTTTAAGAAACCCCAGTATTCTTCATTCTGTGCCACTACATTCTACTGGCCCTCCTCTGTCG

Protein sequence

SCSYCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSMAKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNCYVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCDIWPKGFEKVGPTDQSIALYFFPEGESEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSSMLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHSVPLHSTGPPLS
Homology
BLAST of MS004652 vs. NCBI nr
Match: XP_022143682.1 (uncharacterized protein LOC111013528 isoform X1 [Momordica charantia])

HSP 1 Score: 620.9 bits (1600), Expect = 5.9e-174
Identity = 310/311 (99.68%), Postives = 310/311 (99.68%), Query Frame = 0

Query: 4   YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 63
           YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM
Sbjct: 31  YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 90

Query: 64  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC 123
           AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC
Sbjct: 91  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC 150

Query: 124 YVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCD 183
           YVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCD
Sbjct: 151 YVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCD 210

Query: 184 IWPKGFEKVGPTDQSIALYFFPEGE-SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS 243
           IWPKGFEKVGPTDQSIALYFFPEGE SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS
Sbjct: 211 IWPKGFEKVGPTDQSIALYFFPEGESSEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS 270

Query: 244 MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS 303
           MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS
Sbjct: 271 MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS 330

Query: 304 VPLHSTGPPLS 314
           VPLHSTGPPLS
Sbjct: 331 VPLHSTGPPLS 341

BLAST of MS004652 vs. NCBI nr
Match: XP_022143684.1 (uncharacterized protein LOC111013528 isoform X3 [Momordica charantia])

HSP 1 Score: 565.5 bits (1456), Expect = 2.9e-157
Identity = 286/287 (99.65%), Postives = 286/287 (99.65%), Query Frame = 0

Query: 28  MVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSMAKIEAHKGQSCSPIQLPEAQCSEK 87
           MVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSMAKIEAHKGQSCSPIQLPEAQCSEK
Sbjct: 1   MVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSMAKIEAHKGQSCSPIQLPEAQCSEK 60

Query: 88  NDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNCYVAQPIVEPVWRGSLRFWNKSFGR 147
           NDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNCYVAQPIVEPVWRGSLRFWNKSFGR
Sbjct: 61  NDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNCYVAQPIVEPVWRGSLRFWNKSFGR 120

Query: 148 LCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCDIWPKGFEKVGPTDQSIALYFFPEG 207
           LCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCDIWPKGFEKVGPTDQSIALYFFPEG
Sbjct: 121 LCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCDIWPKGFEKVGPTDQSIALYFFPEG 180

Query: 208 E-SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSSMLPMQYWRFQARYYLWGVFRGRQA 267
           E SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSSMLPMQYWRFQARYYLWGVFRGRQA
Sbjct: 181 ESSEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSSMLPMQYWRFQARYYLWGVFRGRQA 240

Query: 268 LQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHSVPLHSTGPPLS 314
           LQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHSVPLHSTGPPLS
Sbjct: 241 LQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHSVPLHSTGPPLS 287

BLAST of MS004652 vs. NCBI nr
Match: XP_022143683.1 (uncharacterized protein LOC111013528 isoform X2 [Momordica charantia])

HSP 1 Score: 508.4 bits (1308), Expect = 4.3e-140
Identity = 264/311 (84.89%), Postives = 264/311 (84.89%), Query Frame = 0

Query: 4   YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 63
           YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM
Sbjct: 31  YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 90

Query: 64  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC 123
           AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC
Sbjct: 91  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC 150

Query: 124 YVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCD 183
           YVAQPIVEPVW                                              RCD
Sbjct: 151 YVAQPIVEPVW----------------------------------------------RCD 210

Query: 184 IWPKGFEKVGPTDQSIALYFFPEGE-SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS 243
           IWPKGFEKVGPTDQSIALYFFPEGE SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS
Sbjct: 211 IWPKGFEKVGPTDQSIALYFFPEGESSEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS 270

Query: 244 MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS 303
           MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS
Sbjct: 271 MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS 295

Query: 304 VPLHSTGPPLS 314
           VPLHSTGPPLS
Sbjct: 331 VPLHSTGPPLS 295

BLAST of MS004652 vs. NCBI nr
Match: XP_038899415.1 (uncharacterized protein LOC120086715 isoform X1 [Benincasa hispida])

HSP 1 Score: 402.1 bits (1032), Expect = 4.3e-108
Identity = 210/311 (67.52%), Postives = 248/311 (79.74%), Query Frame = 0

Query: 4   YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 63
           YCL  LPE   EYVTW CEDCEA ++P +N KV+ KK+KL KRL+KKK KKKK K     
Sbjct: 35  YCLDPLPESFDEYVTWLCEDCEATILPTVNSKVQLKKEKLVKRLEKKKKKKKKKK----K 94

Query: 64  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSE-ATTSAMSNFLGHN 123
            K     GQS +P+QLPEA CSEK +D TPG  GEPV E G +HS+ AT+S   N + H+
Sbjct: 95  TKRNDDYGQS-NPLQLPEAHCSEKKNDTTPGGPGEPVCEGGASHSQVATSSDACNSMRHD 154

Query: 124 CYVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRC 183
            YVAQPIV+PVWRG+L FWN+S  R+CV+VAH+SSLACSKVYEEAK+LP+LLSVELLRRC
Sbjct: 155 YYVAQPIVDPVWRGTLNFWNQSISRVCVVVAHVSSLACSKVYEEAKMLPELLSVELLRRC 214

Query: 184 DIWPKGFEKVGPTDQSIALYFFPEGESEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS 243
           D+WP+GF+K+GPTDQSIALYFFP+ ES+KAFDLLVN+MMC+DLAMKAVLKNAELLVFTSS
Sbjct: 215 DVWPRGFKKLGPTDQSIALYFFPDEESQKAFDLLVNAMMCQDLAMKAVLKNAELLVFTSS 274

Query: 244 MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQ---SPVSSLRNPSI 303
           MLPM+YWRFQ +YYLWGVFRG+Q +Q  NNVAS E +F++S  CMQ   SP+S L N SI
Sbjct: 275 MLPMRYWRFQTKYYLWGVFRGKQ-VQPRNNVASEEGSFADSSPCMQSPISPISPLSNTSI 334

Query: 304 LHSVPLHSTGP 311
           LHS  L S  P
Sbjct: 335 LHSGSLRSCSP 339

BLAST of MS004652 vs. NCBI nr
Match: XP_023536446.1 (uncharacterized protein LOC111797622 [Cucurbita pepo subsp. pepo] >XP_023536447.1 uncharacterized protein LOC111797622 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.3 bits (1004), Expect = 7.6e-105
Identity = 208/313 (66.45%), Postives = 239/313 (76.36%), Query Frame = 0

Query: 4   YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKK-KVKKKKNKGIGS 63
           YCL  LP+   EYVTWFCEDCEA + P++  KVK K+KKL KRLKKK K   K+N     
Sbjct: 35  YCLDKLPKTFDEYVTWFCEDCEATVAPIVKSKVKLKEKKLIKRLKKKWKAMMKRN----- 94

Query: 64  MAKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSE-ATTSAMSNFLGH 123
                  K QS  P+QLP+A CS +N D  PG  GE VRE G NH E A +S  S+FL H
Sbjct: 95  ---ANDDKNQSSRPLQLPDAHCSGEN-DTAPGGPGELVREGGTNHDEVAASSDTSDFLMH 154

Query: 124 NCYVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRR 183
           NCYVAQPIV+PVWRG+L  WN+SFG +CVLVAHMSSLACSKVYEEAK LP+LLSVE+LRR
Sbjct: 155 NCYVAQPIVDPVWRGTLEVWNQSFGGVCVLVAHMSSLACSKVYEEAKTLPELLSVEILRR 214

Query: 184 CDIWPKGFEKVGPTDQSIALYFFPEGE-SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFT 243
            DIWPKGFEK+GPTDQSIALYFF EGE S+KAFDLL+NSMMC+DLAMK VLKNAELLVFT
Sbjct: 215 SDIWPKGFEKLGPTDQSIALYFFAEGERSQKAFDLLINSMMCQDLAMKTVLKNAELLVFT 274

Query: 244 SSMLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPV---SSLRNP 303
           SS+LPM+YWRFQ +YYLWGVFR ++A Q   NVAS E+TF+ES  C+QSP+   S L N 
Sbjct: 275 SSVLPMRYWRFQTKYYLWGVFRAKRAAQPGKNVASEERTFTESSPCIQSPISPTSPLSNT 334

Query: 304 SILHSVPLHSTGP 311
           S+LHS  L S  P
Sbjct: 335 SVLHSGSLRSCSP 338

BLAST of MS004652 vs. ExPASy TrEMBL
Match: A0A6J1CRJ1 (uncharacterized protein LOC111013528 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013528 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 2.8e-174
Identity = 310/311 (99.68%), Postives = 310/311 (99.68%), Query Frame = 0

Query: 4   YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 63
           YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM
Sbjct: 31  YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 90

Query: 64  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC 123
           AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC
Sbjct: 91  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC 150

Query: 124 YVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCD 183
           YVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCD
Sbjct: 151 YVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCD 210

Query: 184 IWPKGFEKVGPTDQSIALYFFPEGE-SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS 243
           IWPKGFEKVGPTDQSIALYFFPEGE SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS
Sbjct: 211 IWPKGFEKVGPTDQSIALYFFPEGESSEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS 270

Query: 244 MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS 303
           MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS
Sbjct: 271 MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS 330

Query: 304 VPLHSTGPPLS 314
           VPLHSTGPPLS
Sbjct: 331 VPLHSTGPPLS 341

BLAST of MS004652 vs. ExPASy TrEMBL
Match: A0A6J1CQ23 (uncharacterized protein LOC111013528 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111013528 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.4e-157
Identity = 286/287 (99.65%), Postives = 286/287 (99.65%), Query Frame = 0

Query: 28  MVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSMAKIEAHKGQSCSPIQLPEAQCSEK 87
           MVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSMAKIEAHKGQSCSPIQLPEAQCSEK
Sbjct: 1   MVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSMAKIEAHKGQSCSPIQLPEAQCSEK 60

Query: 88  NDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNCYVAQPIVEPVWRGSLRFWNKSFGR 147
           NDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNCYVAQPIVEPVWRGSLRFWNKSFGR
Sbjct: 61  NDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNCYVAQPIVEPVWRGSLRFWNKSFGR 120

Query: 148 LCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCDIWPKGFEKVGPTDQSIALYFFPEG 207
           LCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCDIWPKGFEKVGPTDQSIALYFFPEG
Sbjct: 121 LCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCDIWPKGFEKVGPTDQSIALYFFPEG 180

Query: 208 E-SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSSMLPMQYWRFQARYYLWGVFRGRQA 267
           E SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSSMLPMQYWRFQARYYLWGVFRGRQA
Sbjct: 181 ESSEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSSMLPMQYWRFQARYYLWGVFRGRQA 240

Query: 268 LQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHSVPLHSTGPPLS 314
           LQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHSVPLHSTGPPLS
Sbjct: 241 LQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHSVPLHSTGPPLS 287

BLAST of MS004652 vs. ExPASy TrEMBL
Match: A0A6J1CRB2 (uncharacterized protein LOC111013528 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013528 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.1e-140
Identity = 264/311 (84.89%), Postives = 264/311 (84.89%), Query Frame = 0

Query: 4   YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 63
           YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM
Sbjct: 31  YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 90

Query: 64  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC 123
           AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC
Sbjct: 91  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSEATTSAMSNFLGHNC 150

Query: 124 YVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRCD 183
           YVAQPIVEPVW                                              RCD
Sbjct: 151 YVAQPIVEPVW----------------------------------------------RCD 210

Query: 184 IWPKGFEKVGPTDQSIALYFFPEGE-SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS 243
           IWPKGFEKVGPTDQSIALYFFPEGE SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS
Sbjct: 211 IWPKGFEKVGPTDQSIALYFFPEGESSEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSS 270

Query: 244 MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS 303
           MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS
Sbjct: 271 MLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPVSSLRNPSILHS 295

Query: 304 VPLHSTGPPLS 314
           VPLHSTGPPLS
Sbjct: 331 VPLHSTGPPLS 295

BLAST of MS004652 vs. ExPASy TrEMBL
Match: A0A6J1IER8 (uncharacterized protein LOC111475358 OS=Cucurbita maxima OX=3661 GN=LOC111475358 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.4e-104
Identity = 207/312 (66.35%), Postives = 236/312 (75.64%), Query Frame = 0

Query: 4   YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 63
           YCL  LP+   EYVTWFCEDCEA + P++  KVK K+KKL KRLKKK     K K     
Sbjct: 35  YCLDKLPKTFDEYVTWFCEDCEATVAPIVKSKVKLKEKKLVKRLKKKWKAMMKRKA---- 94

Query: 64  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSE-ATTSAMSNFLGHN 123
                   QS  P+QLP+A CS +N D  PG  GE VRE G NH E A +S  S+FL HN
Sbjct: 95  ---NDDDNQSGHPLQLPDAHCSGEN-DTAPGGPGELVREGGTNHDEVAISSDTSDFLRHN 154

Query: 124 CYVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRC 183
           CYVAQPIV+PVWRG+L  WN+SFG +CVLVAHMSSLACSKVYEEAK LP+LLSVE+LRR 
Sbjct: 155 CYVAQPIVDPVWRGTLEVWNQSFGGVCVLVAHMSSLACSKVYEEAKTLPELLSVEILRRS 214

Query: 184 DIWPKGFEKVGPTDQSIALYFFPEGE-SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTS 243
           DIWPKGFEK+GPTDQSIALYFF EGE S+KAFDLL+NSMMC+DLAMK VLKNAELLVFTS
Sbjct: 215 DIWPKGFEKLGPTDQSIALYFFAEGERSQKAFDLLINSMMCQDLAMKTVLKNAELLVFTS 274

Query: 244 SMLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPV---SSLRNPS 303
           S+LPMQYWRFQ +YYLWGVFR ++A Q   NVAS E+TF+ES  C+QSP+   S L N S
Sbjct: 275 SVLPMQYWRFQTKYYLWGVFRAKRAAQPGKNVASEERTFTESSPCIQSPISPTSPLSNTS 334

Query: 304 ILHSVPLHSTGP 311
           +LHS  L S  P
Sbjct: 335 VLHSGSLRSCSP 338

BLAST of MS004652 vs. ExPASy TrEMBL
Match: A0A6J1FG38 (uncharacterized protein LOC111443603 OS=Cucurbita moschata OX=3662 GN=LOC111443603 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 6.9e-104
Identity = 205/312 (65.71%), Postives = 236/312 (75.64%), Query Frame = 0

Query: 4   YCLPTLPEILHEYVTWFCEDCEAIMVPVINCKVKFKKKKLAKRLKKKKVKKKKNKGIGSM 63
           YCL  LP+   EYVTWFCEDCEA + P++  KVK K+KKL KRLKKK     K K     
Sbjct: 35  YCLDKLPKTFDEYVTWFCEDCEATVAPIVKSKVKLKEKKLIKRLKKKWKAMMKRKA---- 94

Query: 64  AKIEAHKGQSCSPIQLPEAQCSEKNDDMTPGRSGEPVREDGPNHSE-ATTSAMSNFLGHN 123
                 K QS  P+QLP+  CS +N D  PG  GE VRE G NH E A +S  S+FL HN
Sbjct: 95  ---NDDKNQSSHPLQLPDTHCSGEN-DTAPGGPGELVREGGTNHDEVAASSDTSDFLRHN 154

Query: 124 CYVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRC 183
           CYVAQPIV+PVWRG+L  WN+SFG +CVLVAHMSSLACSKVYEEAK+LP+LLSVE+LRR 
Sbjct: 155 CYVAQPIVDPVWRGTLEVWNQSFGGVCVLVAHMSSLACSKVYEEAKILPELLSVEILRRS 214

Query: 184 DIWPKGFEKVGPTDQSIALYFFPEGE-SEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTS 243
           DIWPKGFEK+GPTDQSIALYFF EGE S+KAFDLL+NSMM +DLAMK VLKNAELLVFTS
Sbjct: 215 DIWPKGFEKLGPTDQSIALYFFAEGERSQKAFDLLINSMMSQDLAMKTVLKNAELLVFTS 274

Query: 244 SMLPMQYWRFQARYYLWGVFRGRQALQQINNVASTEKTFSESLHCMQSPV---SSLRNPS 303
           S+LPM+YWRFQ +YYLWGVFR ++A Q   NVAS E+TF+ES  C+QSP+   S L N S
Sbjct: 275 SVLPMRYWRFQTKYYLWGVFRAKRAAQPRKNVASEERTFTESSPCIQSPISPTSPLSNTS 334

Query: 304 ILHSVPLHSTGP 311
           +LHS  L S  P
Sbjct: 335 VLHSGSLRSCSP 338

BLAST of MS004652 vs. TAIR 10
Match: AT1G43770.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 3.0e-35
Identity = 81/166 (48.80%), Postives = 102/166 (61.45%), Query Frame = 0

Query: 103 DGPNHSEATTSAMSNFLGHNCYVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSK 162
           DG +      S M   L    Y AQPI  P+WRG +     +   +  +VAH+SSLAC K
Sbjct: 262 DGSSSCRVAESNMPLTLTSRNYRAQPIKIPIWRGLMSVKGGNSCTMDGIVAHVSSLACPK 321

Query: 163 VYEEAKLLPQLLSVELLRRCDIWPKGFEK-VGPTDQSIALYFFPEGES--EKAFDLLVNS 222
           V+E A  L   LS E+L R ++WPK F K  GP D+S+AL+FFP  ES  EK FD LV+ 
Sbjct: 322 VHETASSLKGRLSAEILPRLEVWPKTFLKNGGPKDESVALFFFPSSESNDEKVFDSLVDK 381

Query: 223 MMCKDLAMKAVLKNAELLVFTSSMLPMQYWRFQARYYLWGVFRGRQ 266
           M   D AM+ VL +AELL+FTS MLP   W F ++YYLWGVF+ RQ
Sbjct: 382 MKKNDSAMRCVLNDAELLLFTSYMLPKDSWTFNSKYYLWGVFKPRQ 427

BLAST of MS004652 vs. TAIR 10
Match: AT5G16680.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 6.8e-19
Identity = 55/154 (35.71%), Postives = 84/154 (54.55%), Query Frame = 0

Query: 126 AQPIVEPVWRGSL---RFWNKSFGRLCVLVAHMSSLACSKVYEEAKLLPQLLSVELLRRC 185
           A P  E +W+G L   +  N+S      + AH+S+LA  +V E     P+  S+  + R 
Sbjct: 830 AIPDHEFIWQGDLEVRKIINQS-AMHSGIQAHLSTLASPRVAEVVNKFPETFSLNEVPRK 889

Query: 186 DIWPKGFEKVGPTDQSIALYFFPEGES--EKAFDLLVNSMMCKDLAMKAVLKNAELLVFT 245
             WP  FEK+G  +  IAL+FF +     E+ +  LV++M+  DLA+K  L N +LL+F 
Sbjct: 890 STWPTQFEKLGTKEAHIALFFFAKDTESYERNYKPLVDNMIKNDLALKGNLDNVDLLIFA 949

Query: 246 SSMLPMQYWRFQARYYLWGVFRGRQALQQINNVA 275
           S+ LP    R+   Y+LWGVF+GR+      N +
Sbjct: 950 SNQLPSNCQRWNMLYFLWGVFQGRKETNPQKNTS 982

BLAST of MS004652 vs. TAIR 10
Match: AT3G02890.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-18
Identity = 62/184 (33.70%), Postives = 95/184 (51.63%), Query Frame = 0

Query: 89  DDMTPGRSGEPVREDGPNHS--EATTSAMSNFLGHNCYVAQPIVEPVWRGSLRFWNKSFG 148
           D  T  +S EP   D    S       A  N L     + +P  E +W+G L    KS  
Sbjct: 656 DATTASQSVEPEVNDPSVQSVMRDLPVAAPNVLSTTSAIPKP--EYIWQGDLEV-QKSRN 715

Query: 149 RLCV---LVAHMSSLACSKVYEEAKLLPQLLSVELLRRCDIWPKGFEKVGPTDQSIALYF 208
              +   + A++S+LA  KV E  K  P+ +++  + R   WP  F+  G  +Q +AL+F
Sbjct: 716 LSAMHSGIQAYLSTLASPKVVEVVKQFPEKVTLNEVPRLSSWPAQFQDTGAKEQHVALFF 775

Query: 209 FPEG--ESEKAFDLLVNSMMCKDLAMKAVLKNAELLVFTSSMLPMQYWRFQARYYLWGVF 266
           F +     EK +  LV++M+ KDLA+K  L+  ELL+F S+ LP    R+   ++LWGVF
Sbjct: 776 FAKDIESYEKNYKPLVDNMIQKDLALKGNLEGVELLIFASNQLPQDCQRWNMLFFLWGVF 835

BLAST of MS004652 vs. TAIR 10
Match: AT1G43770.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 4.9e-17
Identity = 47/107 (43.93%), Postives = 61/107 (57.01%), Query Frame = 0

Query: 103 DGPNHSEATTSAMSNFLGHNCYVAQPIVEPVWRGSLRFWNKSFGRLCVLVAHMSSLACSK 162
           DG +      S M   L    Y AQPI  P+WRG +     +   +  +VAH+SSLAC K
Sbjct: 262 DGSSSCRVAESNMPLTLTSRNYRAQPIKIPIWRGLMSVKGGNSCTMDGIVAHVSSLACPK 321

Query: 163 VYEEAKLLPQLLSVELLRRCDIWPKGFEK-VGPTDQSIALYFFPEGE 209
           V+E A  L   LS E+L R ++WPK F K  GP D+S+AL+FFP  E
Sbjct: 322 VHETASSLKGRLSAEILPRLEVWPKTFLKNGGPKDESVALFFFPSSE 368

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022143682.15.9e-17499.68uncharacterized protein LOC111013528 isoform X1 [Momordica charantia][more]
XP_022143684.12.9e-15799.65uncharacterized protein LOC111013528 isoform X3 [Momordica charantia][more]
XP_022143683.14.3e-14084.89uncharacterized protein LOC111013528 isoform X2 [Momordica charantia][more]
XP_038899415.14.3e-10867.52uncharacterized protein LOC120086715 isoform X1 [Benincasa hispida][more]
XP_023536446.17.6e-10566.45uncharacterized protein LOC111797622 [Cucurbita pepo subsp. pepo] >XP_023536447.... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CRJ12.8e-17499.68uncharacterized protein LOC111013528 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CQ231.4e-15799.65uncharacterized protein LOC111013528 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CRB22.1e-14084.89uncharacterized protein LOC111013528 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1IER81.4e-10466.35uncharacterized protein LOC111475358 OS=Cucurbita maxima OX=3661 GN=LOC111475358... [more]
A0A6J1FG386.9e-10465.71uncharacterized protein LOC111443603 OS=Cucurbita moschata OX=3662 GN=LOC1114436... [more]
Match NameE-valueIdentityDescription
AT1G43770.23.0e-3548.80RING/FYVE/PHD zinc finger superfamily protein [more]
AT5G16680.16.8e-1935.71RING/FYVE/PHD zinc finger superfamily protein [more]
AT3G02890.11.5e-1833.70RING/FYVE/PHD zinc finger superfamily protein [more]
AT1G43770.14.9e-1743.93RING/FYVE/PHD zinc finger superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..111
NoneNo IPR availablePANTHERPTHR33304:SF18OS12G0161900 PROTEINcoord: 4..282
NoneNo IPR availablePANTHERPTHR33304FAMILY NOT NAMEDcoord: 4..282

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS004652.1MS004652.1mRNA