MS004556 (gene) Bitter gourd (TR) v1

Overview


Name	MS004556
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	prolyl-tRNA synthetase associated domain-containing protein 1
Location	scaffold995: 236251 .. 240181 (+)
RNA-Seq Expression	MS004556
Synteny	MS004556

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCGAGCTTTGTGCTTCAGTATGGCAAAGGAGGTTTACACCAGGGAAGAGTTGCTAGCGTTGTTGCAGGTACTCGGATTTCTCACTCTGTTTCGTTCTCTTTCCATAAATTTCCATCGCGTAAGTTGATTCCTCGTGCTGAACTTCAGAGTATAGGTTTTTACTCCCTTGATCGAATGTTAGAGACCTGTCGTTTGGATTTTTCTAGCACTCTGATGTTTCTTATTGTTCGACGTTATAATTCACTTGCTTGGAGTAGTGACGAGAACAGACTGGCAGACTAATACAATAGGCTAGTTTCCGTCGGAATGCGTAGTTTGCATCAACGCCTACTATTGATTTCTCCTAGATTGAGGAGTTATCTTGTTTGCTTAACTTTCTGTCATTTCCGGATTGATATATGATGATTCAATTATGCGTATTTGATTTGCCTTTTTACTACTATATCTCTCGCTAATGTTGTTAAGAATGCTCCTTAGGATCATCAAATTCATTTTTCCAAGTACGAACATCCAGCTGTATTGACGGTTGAAGCTCAGGTAAAGCTGTGTCACAAAAAAAGGGAAAAAAAATCAGATCGTCCTTTTTTGTTCTAACGTTGATGTGTTTTTAGATAATATAACGATAACATGTTTTTATTGAATCTACATCAGGCAAAATATGTTGGAAATCTGGGGGGTGGACTCAGTAAGAATCTGTTTTTGAAGGTAGACTTTTTGAACAGCCTTTTCTGGTCCATATTTGTGATTATTATACTATTGTATACCACATTACCGCATATGTTTTAACTCCTGCGATATTTTATGCTCATTGGCAGGACAAAAAGAATAGATACTACATCGTTTCTGCATTGGCAGACACCAAAGTGGACCTGAAAGGTCTGTACATTTTACTTATGGCTGTGATTTGTGTTTAAAATTTTATTATATAAGGTTCTTTGAGTCTTTACCCATCAATGTGTGTGGTTTTTGAAGATAAAATTTCTATGATCATATATTTATAGTGCGATATTGTAGTCATGCAGTTCTATCTGCAAGACTTGGTTTGGGGAAAGGAGGTCTGAGAATGGCTCCTGAGGAAGCATTGGGTGAGAAACTTAAGGTTAGGAATCACCTTTTCTCAATTCACACTGACACCATTCTTTCACTTCATTTCGTTAGTCTTACATGAGGACATTTCGTGAAGAAGTTGCTAACGATGATACTATGGTTCTTCATTAATGTGAAATTGTGTTTCCATCTAATTAAGTAGCCTTCATTTTCTTCATTATGTAAAGCTAATTGGTATTTGGTTGTGTCATCTTTTCAAGGCTTTAAGGATGCCTAACTGTAGAGTAGTTAATGTCTATTGCACCGGTTAATTGATGCTAGCTATATTCATGGATGATGATAATTAAACTGTACAGTTCTAGATTTCCATCTTGATGACTGTCATTTGATTACTTATATTGTTGTTTTCATCTGTTGGATAGGTATCTCTTGGTAGTGTTACTCCGTTTGCACTCATCAATAAAACAGCGCGGTAGGCATTAATCAAAATTTCATTTTCATTTTCAGTTGCTTTCTGTGCATTGTTTTTAGTCCATATTGATGCTTCTTTTAATCAGATTTATGTAGTTAAGACTTGGACCATACTTGAACATTTAGCAATGTGCAACCTTTAAGTGGTGGAAAGAAAAGCTAATTGTATCTGACAGTTGGACAATCTGATAATTAATCATAACATATTATATCTTTTCCTTTTACTTTGTGCTTATTAACCATGCATGAATATATCATCTATTTATTCAATTGAATCTCACACAAGTTATTATGTGTAATTGCAAACCTTTCCTTGTGCAGAGATGTCGCATTGTTGTTGGACCAAGGATTTAAAAGCCAGGAATTCTGCTTCTTCCACCCTTTGTCAAATGAAACCTCAATATGTAAGTGAGGTGTACTTTTGTTTATATAATTTATTCCTTTATTTACCTCTTTATGCATATTTTGCTTGAACTTTAGGGTTTCTAGATGTCCATTTCTGACTTTTAGCATTGCTATAAAGTTTCCACTTGTTAAATAATGTTATTCTGGGTTCCACTTTTCATTTTGACGGCCATTTTCATTTTACTGTATTTGGTGGCTGTCACTGATGAACACTCCATGTTTATCTTACTTGATGACTGTCAAAGAAGAAAGTCTTTTTGTATAGTTCTGCTTTTGACTACCATCATCATTCCATTCATCTGTTGGAACCGGTAATTTTGTTGCATTTGATTAGGTTAGAATCATTTAAATTGGTTTTATTGCTTTCCTATGAAAATATTGCTTTGATCATATTATTTTTGGTGAATTAATTTGTAGAACCTTGCCTTCACTTCTTATCAGTTAGACTCTAATAAACTTTATATATTGATGTTTCCAGCCCTTAATGCCAGTAATCTCGACAAGTTCCTTAAAGTGATTGGGAGAGACCCTTCATATGTTGACTTGGAGGTGAACCCATATCTGGTGATTACTAAGTTGATCCGAAAAGTTTATCATTTGGTTGATTATTATTCTCTCTCTGCAGGCTAACCCTTCTGTAGGAAAGGATCAACCCCCTGATCTTGCTGGACTTGTTCCATCTGGTACGGCCTTTGTGCCGGATACTCCAGAGAAAGCATCTTCATGTCCAAATTCGATTGAAAATCATGGTGTTGTAGACAAAAAGAAGTCTAAGGTAGTTGCAGGTAATATATGAAGCGTACGCTTAAATAGTAGAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATGACGAAATTGTAGGAAGGTTTTGTTGCGTCGGGACAGAAGGACTGGGCTAACTAAATGTTAGGTTGTGTAAGGTTTTCTAGTTTGCCTTTAGATTCATTATATACTTCTGGAGGTATAAATTTTATTCCTTACCGCATTTTAGTGTTTTGCCAACAAGTTACTTCCCTTGCTAAATAATAATTGATGTTAACTGATTGACCATAACTGCGGAACAGCCTGACAATATGTCAAGCTAAGCTCTTATGCCTTATTGCAACATTTGTTAATTGACTCTATATTTACATTGTAGAATGCAAATATGTGTTTTTATGAGTTAAATGCCCTGGACACTCACGGATATAAAAAAGAAAAAGTTAAATGCATTGGTTCTTGGTTTGCACCTGGGGCTTTTGCAAAAGTAACGAGTCTCTCTCTTTAAAACAGGGGACACAGCCAAACCATCTACTGCTGTCAAAGTTGCAAAGGACAAACCTGTACCAACAGTACGAACATCCCATGCAAATGTGGAGCAATTTGTGGAAGAGATCCTTAATAAGACGTCGGCAATAGTGCTCTCAGAGGTTACTACACCGTTCTTTGCATTAGTATCCACTTAGTCGAAACTGTTCTCTAACTGACAAGATCAAGTTTTACAGCTCACAGAGGAGACTGTTAGGAAACATGGAGAGCAATTGGGAACTGTGGTGTCAAACAGCATCAAGAGCCATCTTAGCTCGGAGTTGAACAATCTTTCTGTGAGTATTTTACCTAAGATGGTTATTTTTTGTTTTCTTCATTTGGAGCAACGAAAAACCACTTAAGATCCACGCACTTGCAATTGAAAAGTTCAAAATACTTGCTGTACTAACCGATCTTTCAGTTTTGAGTGAAACGATTATAATTGTCCATCTTATTTAGTTCAGTATAATGTTAATTTTTATGAAATAAATTTTGGGTGAAAAGATTATAATTGTCTGTTTTATTTTAGATCAGTTAAATGTTATTTCCTATGAAATAAAGCTGAAGTGTATGATTAATTATGATGCATGTATTATTGCAGATGATATTTAAGAACACTGCATACACAGAAGGGTTTCACGCTGGATCTTCCCATAAAGTAAAGCATGCATGC

mRNA sequence

ATTCGAGCTTTGTGCTTCAGTATGGCAAAGGAGGTTTACACCAGGGAAGAGTTGCTAGCGTTGTTGCAGGATCATCAAATTCATTTTTCCAAGTACGAACATCCAGCTGTATTGACGGTTGAAGCTCAGGCAAAATATGTTGGAAATCTGGGGGGTGGACTCAGTAAGAATCTGTTTTTGAAGGACAAAAAGAATAGATACTACATCGTTTCTGCATTGGCAGACACCAAAGTGGACCTGAAAGTTCTATCTGCAAGACTTGGTTTGGGGAAAGGAGGTCTGAGAATGGCTCCTGAGGAAGCATTGGGTGAGAAACTTAAGGTATCTCTTGGTAGTGTTACTCCGTTTGCACTCATCAATAAAACAGCGCGAGATGTCGCATTGTTGTTGGACCAAGGATTTAAAAGCCAGGAATTCTGCTTCTTCCACCCTTTGTCAAATGAAACCTCAATATCCCTTAATGCCAGTAATCTCGACAAGTTCCTTAAAGTGATTGGGAGAGACCCTTCATATGTTGACTTGGAGGCTAACCCTTCTGTAGGAAAGGATCAACCCCCTGATCTTGCTGGACTTGTTCCATCTGGTACGGCCTTTGTGCCGGATACTCCAGAGAAAGCATCTTCATGTCCAAATTCGATTGAAAATCATGGTGTTGTAGACAAAAAGAAGTCTAAGGTAGTTGCAGGGGACACAGCCAAACCATCTACTGCTGTCAAAGTTGCAAAGGACAAACCTGTACCAACAGTACGAACATCCCATGCAAATGTGGAGCAATTTGTGGAAGAGATCCTTAATAAGACGTCGGCAATAGTGCTCTCAGAGCTCACAGAGGAGACTGTTAGGAAACATGGAGAGCAATTGGGAACTGTGGTGTCAAACAGCATCAAGAGCCATCTTAGCTCGGAGTTGAACAATCTTTCTATGATATTTAAGAACACTGCATACACAGAAGGGTTTCACGCTGGATCTTCCCATAAAGTAAAGCATGCATGC

Coding sequence (CDS)

ATTCGAGCTTTGTGCTTCAGTATGGCAAAGGAGGTTTACACCAGGGAAGAGTTGCTAGCGTTGTTGCAGGATCATCAAATTCATTTTTCCAAGTACGAACATCCAGCTGTATTGACGGTTGAAGCTCAGGCAAAATATGTTGGAAATCTGGGGGGTGGACTCAGTAAGAATCTGTTTTTGAAGGACAAAAAGAATAGATACTACATCGTTTCTGCATTGGCAGACACCAAAGTGGACCTGAAAGTTCTATCTGCAAGACTTGGTTTGGGGAAAGGAGGTCTGAGAATGGCTCCTGAGGAAGCATTGGGTGAGAAACTTAAGGTATCTCTTGGTAGTGTTACTCCGTTTGCACTCATCAATAAAACAGCGCGAGATGTCGCATTGTTGTTGGACCAAGGATTTAAAAGCCAGGAATTCTGCTTCTTCCACCCTTTGTCAAATGAAACCTCAATATCCCTTAATGCCAGTAATCTCGACAAGTTCCTTAAAGTGATTGGGAGAGACCCTTCATATGTTGACTTGGAGGCTAACCCTTCTGTAGGAAAGGATCAACCCCCTGATCTTGCTGGACTTGTTCCATCTGGTACGGCCTTTGTGCCGGATACTCCAGAGAAAGCATCTTCATGTCCAAATTCGATTGAAAATCATGGTGTTGTAGACAAAAAGAAGTCTAAGGTAGTTGCAGGGGACACAGCCAAACCATCTACTGCTGTCAAAGTTGCAAAGGACAAACCTGTACCAACAGTACGAACATCCCATGCAAATGTGGAGCAATTTGTGGAAGAGATCCTTAATAAGACGTCGGCAATAGTGCTCTCAGAGCTCACAGAGGAGACTGTTAGGAAACATGGAGAGCAATTGGGAACTGTGGTGTCAAACAGCATCAAGAGCCATCTTAGCTCGGAGTTGAACAATCTTTCTATGATATTTAAGAACACTGCATACACAGAAGGGTTTCACGCTGGATCTTCCCATAAAGTAAAGCATGCATGC

Protein sequence

IRALCFSMAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRYYIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVALLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPDLAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVPTVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLSMIFKNTAYTEGFHAGSSHKVKHAC

Homology

[Close]

BLAST of MS004556 vs. NCBI nr
Match: XP_022138900.1 (uncharacterized protein LOC111009964 [Momordica charantia])

HSP 1 Score: 627.5 bits (1617), Expect = 6.6e-176
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 8   MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 67
           MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY
Sbjct: 1   MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 60

Query: 68  YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA 127
           YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA
Sbjct: 61  YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA 120

Query: 128 LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD 187
           LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD
Sbjct: 121 LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD 180

Query: 188 LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP 247
           LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP
Sbjct: 181 LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP 240

Query: 248 TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS 307
           TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS
Sbjct: 241 TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS 300

Query: 308 MIFKNTAYTEGFHAGSSHKVKHAC 332
           MIFKNTAYTEGFHAGSSHKVKHAC
Sbjct: 301 MIFKNTAYTEGFHAGSSHKVKHAC 324

[Close]

BLAST of MS004556 vs. NCBI nr
Match: KGN54578.1 (hypothetical protein Csa_012651 [Cucumis sativus])

HSP 1 Score: 549.3 bits (1414), Expect = 2.3e-152
Identity = 285/331 (86.10%), Postives = 301/331 (90.94%), Query Frame = 0


Query: 1   IRALCFSMAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFL 60
           I +LCFSMAKEVYTRE LL+LLQD Q+ FS+YEHPAVLTVEAQAKYVGNLGGGLSKNLFL
Sbjct: 63  IPSLCFSMAKEVYTREHLLSLLQDLQVDFSRYEHPAVLTVEAQAKYVGNLGGGLSKNLFL 122

Query: 61  KDKKNRYYIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALIN 120
           KDKKNRYYIVSALADTKVDLKVLS RLGLGKGGLRMAPEEALGEKLKVSLG VTPFALIN
Sbjct: 123 KDKKNRYYIVSALADTKVDLKVLSVRLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALIN 182

Query: 121 KTARDVALLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSV 180
           KTARDVALLLDQGFK QEFCFFHPLSNETSIS+N SNLDKFL+ IGRDPSYVDLEANPSV
Sbjct: 183 KTARDVALLLDQGFKGQEFCFFHPLSNETSISINTSNLDKFLQSIGRDPSYVDLEANPSV 242

Query: 181 GKDQPPDLAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKV 240
           GKDQPPDLAGLVPS ++ VPDTPEK SS P+S ENHGV D KKSK VA +T KPST VKV
Sbjct: 243 GKDQPPDLAGLVPSVSSLVPDTPEKVSSHPDSNENHGVTD-KKSKAVAANTVKPSTTVKV 302

Query: 241 AKDKPVPTVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLS 300
            KDKP P V+ ++ANVE+FVEEIL+KTSAIVLS+LTEETV KHGE LG  VSNSIK HLS
Sbjct: 303 GKDKPTPKVQPTYANVEKFVEEILDKTSAIVLSQLTEETVNKHGEHLGAAVSNSIKRHLS 362

Query: 301 SELNNLSMIFKNTAYTEGFHAGSSHKVKHAC 332
           SELNNLSMIFKNTAYTEGFHAGSSHKVKH C
Sbjct: 363 SELNNLSMIFKNTAYTEGFHAGSSHKVKHPC 392

[Close]

BLAST of MS004556 vs. NCBI nr
Match: XP_038898012.1 (prolyl-tRNA synthetase associated domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 547.4 bits (1409), Expect = 8.7e-152
Identity = 288/324 (88.89%), Postives = 299/324 (92.28%), Query Frame = 0


Query: 8   MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 67
           MAKEVYTREELLALLQD QI FS+YEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY
Sbjct: 1   MAKEVYTREELLALLQDLQIDFSRYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 60

Query: 68  YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA 127
           YIVSALAD KVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLG VTPFALINKTARDVA
Sbjct: 61  YIVSALADAKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALINKTARDVA 120

Query: 128 LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD 187
           LLLDQGFKSQEFCFFHPLSNETSIS+N+SNLDKFL+ IGRDPSYVDLEANPSVGKDQPPD
Sbjct: 121 LLLDQGFKSQEFCFFHPLSNETSISINSSNLDKFLQSIGRDPSYVDLEANPSVGKDQPPD 180

Query: 188 LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP 247
           LAGLVPSG++ VPDTPEK SS  +S ENHGV D KKSK VA +T K STAVKV KDKP P
Sbjct: 181 LAGLVPSGSSLVPDTPEKVSSHADSNENHGVTD-KKSKAVAANTVKLSTAVKVGKDKPAP 240

Query: 248 TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS 307
             R S+ANVE+FVEEIL+KTSAIVLSELTEETV KHGEQLG VVSNSIK HLSSELNNLS
Sbjct: 241 KGRPSYANVEKFVEEILDKTSAIVLSELTEETVNKHGEQLGAVVSNSIKRHLSSELNNLS 300

Query: 308 MIFKNTAYTEGFHAGSSHKVKHAC 332
           MIFKN AYTEGFHAGSSHKVKHAC
Sbjct: 301 MIFKNAAYTEGFHAGSSHKVKHAC 323

[Close]

BLAST of MS004556 vs. NCBI nr
Match: XP_022941394.1 (prolyl-tRNA synthetase associated domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 545.8 bits (1405), Expect = 2.5e-151
Identity = 286/324 (88.27%), Postives = 297/324 (91.67%), Query Frame = 0


Query: 8   MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 67
           MAKEVYTREELLALLQD QI F+KYEHPAVLTVEAQAKYVGNLGGG+SKNLFLKDKKNRY
Sbjct: 1   MAKEVYTREELLALLQDLQIDFAKYEHPAVLTVEAQAKYVGNLGGGISKNLFLKDKKNRY 60

Query: 68  YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA 127
           Y+VSALA TKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLG VTPFALINKTARDVA
Sbjct: 61  YVVSALAQTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALINKTARDVA 120

Query: 128 LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD 187
           LLLDQGFKSQEFCFFHPLSNETSISLN +NLDKFLK IGRDPSY+DLEANPSVGKDQPPD
Sbjct: 121 LLLDQGFKSQEFCFFHPLSNETSISLNTTNLDKFLKSIGRDPSYIDLEANPSVGKDQPPD 180

Query: 188 LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP 247
           LAGLVPSG+AFVPDTPEK SSCP S EN GV D KKSK  A    KPS+AVK  KDK VP
Sbjct: 181 LAGLVPSGSAFVPDTPEKTSSCPGSNENQGVAD-KKSKAAA---VKPSSAVKAGKDKAVP 240

Query: 248 TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS 307
             R S+ANVE+FVEEIL+KTSAIVLSELTEETV+KHGEQLG VVSNSIK HLSSELNNLS
Sbjct: 241 KARPSYANVEKFVEEILDKTSAIVLSELTEETVKKHGEQLGDVVSNSIKKHLSSELNNLS 300

Query: 308 MIFKNTAYTEGFHAGSSHKVKHAC 332
           MIFKN AYTEGFHAGSSHKVKHAC
Sbjct: 301 MIFKNNAYTEGFHAGSSHKVKHAC 320

[Close]

BLAST of MS004556 vs. NCBI nr
Match: XP_008444132.1 (PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 543.9 bits (1400), Expect = 9.7e-151
Identity = 283/324 (87.35%), Postives = 296/324 (91.36%), Query Frame = 0


Query: 8   MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 67
           MAKEVYTRE+LL LLQD Q+ FS+YEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY
Sbjct: 1   MAKEVYTREDLLELLQDLQVDFSRYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 60

Query: 68  YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA 127
           YIVSALADTKVDLKVLS RLGLGKGGLRMAPEEALGEKLKVSLG VTPFALINKTARDVA
Sbjct: 61  YIVSALADTKVDLKVLSVRLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALINKTARDVA 120

Query: 128 LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD 187
           LLLDQGFK QEFCFFHPLSNETSIS+N SNLDKFL+ IGRDPSYVDLEANPSVGKDQPPD
Sbjct: 121 LLLDQGFKGQEFCFFHPLSNETSISINTSNLDKFLQSIGRDPSYVDLEANPSVGKDQPPD 180

Query: 188 LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP 247
           LAGLVPSG+A +PDTPEK SS P+S ENHGV D KKSK VA +T KPST VKV KDKP P
Sbjct: 181 LAGLVPSGSALLPDTPEKVSSRPDSNENHGVTD-KKSKAVAVNTVKPSTTVKVGKDKPTP 240

Query: 248 TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS 307
             R ++ANVE+FVEEIL+KTSAIVLSELTEETV KHGE LG VVSNSIK HLSSELNNLS
Sbjct: 241 NGRPTYANVEKFVEEILDKTSAIVLSELTEETVNKHGEHLGAVVSNSIKRHLSSELNNLS 300

Query: 308 MIFKNTAYTEGFHAGSSHKVKHAC 332
           MIFKN AYTEGFHAGSSHKVKHAC
Sbjct: 301 MIFKNVAYTEGFHAGSSHKVKHAC 323

[Close]

BLAST of MS004556 vs. ExPASy Swiss-Prot
Match: Q6NRL0 (Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=prorsd1p PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.2e-24
Identity = 69/164 (42.07%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 15  REELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNR-YYIVSAL 74
           R+ELLA L +  I     EHP V TVE    +V +LGG  SKNLFLKDKK +  ++VS L
Sbjct: 6   RQELLAYLHELDIRPVCAEHPEVFTVEEMMPHVQHLGGAHSKNLFLKDKKKKGLWLVSVL 65

Query: 75  ADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVALLLDQG 134
            D +V+L  L+ +L LG G LR A E ++ EKLKV  G  TP AL      DV  +LD  
Sbjct: 66  HDRQVNLNDLAKKLNLGSGNLRFADEASMLEKLKVGQGCATPLALFCDRG-DVQFVLDAQ 125

Query: 135 F--KSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLE 176
           F     E  +FHP++N  ++ +       FLK  G DP  +  +
Sbjct: 126 FLEGGYERVYFHPMTNAATLGMTPQEFVTFLKKTGHDPIIIHFD 168

[Close]

BLAST of MS004556 vs. ExPASy Swiss-Prot
Match: A6NEY8 (Putative prolyl-tRNA synthetase associated domain-containing protein 1 OS=Homo sapiens OX=9606 GN=PRORSD1P PE=5 SV=3)

HSP 1 Score: 111.3 bits (277), Expect = 2.1e-23
Identity = 62/152 (40.79%), Postives = 89/152 (58.55%), Query Frame = 0


Query: 27  IHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNR-YYIVSALADTKVDLKVLSA 86
           IH    EHP V TVE    ++ +L G  SKNLFLKDKK + Y++V+ L D +++L  L+ 
Sbjct: 19  IHTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQINLNELAK 78

Query: 87  RLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVALLLDQGF--KSQEFCFFH 146
           +LG+G G LR A E A+ EKLKV  G  TP AL      DV  +LD  F     E  +FH
Sbjct: 79  QLGVGSGNLRFADETAMLEKLKVGQGCATPLALF-CDGGDVKFVLDSAFLEGGHEKVYFH 138

Query: 147 PLSNETSISLNASNLDKFLKVIGRDPSYVDLE 176
           P++N  ++ L+  +   F+K+ G DP  ++ +
Sbjct: 139 PMTNAATMGLSPEDFLTFVKMTGHDPIILNFD 169

[Close]

BLAST of MS004556 vs. ExPASy Swiss-Prot
Match: A1A4Q2 (Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Bos taurus OX=9913 GN=PRORSD1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-22
Identity = 61/148 (41.22%), Postives = 87/148 (58.78%), Query Frame = 0


Query: 33  EHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNR-YYIVSALADTKVDLKVLSARLGLGK 92
           EHP V TVE    ++ +L G  SKNLFLKDKK + Y++V+ L D +++L  L+ +LG+G 
Sbjct: 25  EHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQINLNDLAKQLGVGS 84

Query: 93  GGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVALLLDQGF--KSQEFCFFHPLSNET 152
           G LR A E A+ EKLKV  G  TP AL      DV  +LD  F     E  +FHP++N  
Sbjct: 85  GNLRFADEAAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGHEKVYFHPMTNAA 144

Query: 153 SISLNASNLDKFLKVIGRDPSYVDLEAN 178
           ++ L+  +   F+K  G DP  ++ + N
Sbjct: 145 TMGLSPEDFLTFVKNTGHDPIILNFDKN 171

[Close]

BLAST of MS004556 vs. ExPASy Swiss-Prot
Match: Q9D820 (Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Mus musculus OX=10090 GN=Prorsd1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-21
Identity = 63/164 (38.41%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 15  REELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNR-YYIVSAL 74
           R EL   L    I     EHP V T+E    ++ +L G  SKNLFLKDKK + Y++V+ L
Sbjct: 7   RAELEQRLGALAIRTEVVEHPEVFTIEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVL 66

Query: 75  ADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVALLLDQG 134
            D +++L  L  +LG+G G LR A E A+ EKLKV  G  TP +L      DV  +LD  
Sbjct: 67  HDRQINLNDLGKQLGVGSGNLRFADETAMLEKLKVGQGCATPLSLFCDDG-DVKFVLDSA 126

Query: 135 F--KSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLE 176
           F     E  +FHP++N  ++ L+  +   F+K  G DP  ++ +
Sbjct: 127 FLEGGHEKVYFHPMTNAATMGLSPEDFLIFVKATGHDPIILNFD 169

[Close]

BLAST of MS004556 vs. ExPASy Swiss-Prot
Match: Q6PFS2 (Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Danio rerio OX=7955 GN=Prorsd1 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.7e-18
Identity = 62/159 (38.99%), Postives = 86/159 (54.09%), Query Frame = 0


Query: 15  REELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRYYIVSALA 74
           R+EL   L+   I  +  EHP V TVE    +V +L G ++KNLFLKDKK R ++V    
Sbjct: 24  RKELEEFLKRLNIETTCIEHPEVFTVEEMMPHVSHLSGVVTKNLFLKDKKRRVFLVCVRH 83

Query: 75  DTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVALLLDQ-- 134
           D  + L  LS R  LG   LR+A E  L EKL+V  G VTP AL   T R V  +LD+  
Sbjct: 84  DRPLALGELSRR--LGAPNLRLAEERLLLEKLRVRQGCVTPLALFLDTERSVTAVLDREL 143

Query: 135 --GFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDP 170
             G  +   C  HP++N  ++ +  ++L +FL+     P
Sbjct: 144 THGGHTHIHC--HPMTNSATMGITPADLLRFLEETQHTP 178

[Close]

BLAST of MS004556 vs. ExPASy TrEMBL
Match: A0A6J1CAT2 (uncharacterized protein LOC111009964 OS=Momordica charantia OX=3673 GN=LOC111009964 PE=3 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.2e-176
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 8   MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 67
           MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY
Sbjct: 1   MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 60

Query: 68  YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA 127
           YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA
Sbjct: 61  YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA 120

Query: 128 LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD 187
           LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD
Sbjct: 121 LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD 180

Query: 188 LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP 247
           LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP
Sbjct: 181 LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP 240

Query: 248 TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS 307
           TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS
Sbjct: 241 TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS 300

Query: 308 MIFKNTAYTEGFHAGSSHKVKHAC 332
           MIFKNTAYTEGFHAGSSHKVKHAC
Sbjct: 301 MIFKNTAYTEGFHAGSSHKVKHAC 324

[Close]

BLAST of MS004556 vs. ExPASy TrEMBL
Match: A0A0A0KYL1 (tRNA_edit domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G370560 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.1e-152
Identity = 285/331 (86.10%), Postives = 301/331 (90.94%), Query Frame = 0


Query: 1   IRALCFSMAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFL 60
           I +LCFSMAKEVYTRE LL+LLQD Q+ FS+YEHPAVLTVEAQAKYVGNLGGGLSKNLFL
Sbjct: 63  IPSLCFSMAKEVYTREHLLSLLQDLQVDFSRYEHPAVLTVEAQAKYVGNLGGGLSKNLFL 122

Query: 61  KDKKNRYYIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALIN 120
           KDKKNRYYIVSALADTKVDLKVLS RLGLGKGGLRMAPEEALGEKLKVSLG VTPFALIN
Sbjct: 123 KDKKNRYYIVSALADTKVDLKVLSVRLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALIN 182

Query: 121 KTARDVALLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSV 180
           KTARDVALLLDQGFK QEFCFFHPLSNETSIS+N SNLDKFL+ IGRDPSYVDLEANPSV
Sbjct: 183 KTARDVALLLDQGFKGQEFCFFHPLSNETSISINTSNLDKFLQSIGRDPSYVDLEANPSV 242

Query: 181 GKDQPPDLAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKV 240
           GKDQPPDLAGLVPS ++ VPDTPEK SS P+S ENHGV D KKSK VA +T KPST VKV
Sbjct: 243 GKDQPPDLAGLVPSVSSLVPDTPEKVSSHPDSNENHGVTD-KKSKAVAANTVKPSTTVKV 302

Query: 241 AKDKPVPTVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLS 300
            KDKP P V+ ++ANVE+FVEEIL+KTSAIVLS+LTEETV KHGE LG  VSNSIK HLS
Sbjct: 303 GKDKPTPKVQPTYANVEKFVEEILDKTSAIVLSQLTEETVNKHGEHLGAAVSNSIKRHLS 362

Query: 301 SELNNLSMIFKNTAYTEGFHAGSSHKVKHAC 332
           SELNNLSMIFKNTAYTEGFHAGSSHKVKH C
Sbjct: 363 SELNNLSMIFKNTAYTEGFHAGSSHKVKHPC 392

[Close]

BLAST of MS004556 vs. ExPASy TrEMBL
Match: A0A6J1FN76 (prolyl-tRNA synthetase associated domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111446698 PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.2e-151
Identity = 286/324 (88.27%), Postives = 297/324 (91.67%), Query Frame = 0


Query: 8   MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 67
           MAKEVYTREELLALLQD QI F+KYEHPAVLTVEAQAKYVGNLGGG+SKNLFLKDKKNRY
Sbjct: 1   MAKEVYTREELLALLQDLQIDFAKYEHPAVLTVEAQAKYVGNLGGGISKNLFLKDKKNRY 60

Query: 68  YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA 127
           Y+VSALA TKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLG VTPFALINKTARDVA
Sbjct: 61  YVVSALAQTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALINKTARDVA 120

Query: 128 LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD 187
           LLLDQGFKSQEFCFFHPLSNETSISLN +NLDKFLK IGRDPSY+DLEANPSVGKDQPPD
Sbjct: 121 LLLDQGFKSQEFCFFHPLSNETSISLNTTNLDKFLKSIGRDPSYIDLEANPSVGKDQPPD 180

Query: 188 LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP 247
           LAGLVPSG+AFVPDTPEK SSCP S EN GV D KKSK  A    KPS+AVK  KDK VP
Sbjct: 181 LAGLVPSGSAFVPDTPEKTSSCPGSNENQGVAD-KKSKAAA---VKPSSAVKAGKDKAVP 240

Query: 248 TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS 307
             R S+ANVE+FVEEIL+KTSAIVLSELTEETV+KHGEQLG VVSNSIK HLSSELNNLS
Sbjct: 241 KARPSYANVEKFVEEILDKTSAIVLSELTEETVKKHGEQLGDVVSNSIKKHLSSELNNLS 300

Query: 308 MIFKNTAYTEGFHAGSSHKVKHAC 332
           MIFKN AYTEGFHAGSSHKVKHAC
Sbjct: 301 MIFKNNAYTEGFHAGSSHKVKHAC 320

[Close]

BLAST of MS004556 vs. ExPASy TrEMBL
Match: A0A1S3BAG3 (prolyl-tRNA synthetase associated domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103487573 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 4.7e-151
Identity = 283/324 (87.35%), Postives = 296/324 (91.36%), Query Frame = 0


Query: 8   MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 67
           MAKEVYTRE+LL LLQD Q+ FS+YEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY
Sbjct: 1   MAKEVYTREDLLELLQDLQVDFSRYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 60

Query: 68  YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA 127
           YIVSALADTKVDLKVLS RLGLGKGGLRMAPEEALGEKLKVSLG VTPFALINKTARDVA
Sbjct: 61  YIVSALADTKVDLKVLSVRLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALINKTARDVA 120

Query: 128 LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD 187
           LLLDQGFK QEFCFFHPLSNETSIS+N SNLDKFL+ IGRDPSYVDLEANPSVGKDQPPD
Sbjct: 121 LLLDQGFKGQEFCFFHPLSNETSISINTSNLDKFLQSIGRDPSYVDLEANPSVGKDQPPD 180

Query: 188 LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP 247
           LAGLVPSG+A +PDTPEK SS P+S ENHGV D KKSK VA +T KPST VKV KDKP P
Sbjct: 181 LAGLVPSGSALLPDTPEKVSSRPDSNENHGVTD-KKSKAVAVNTVKPSTTVKVGKDKPTP 240

Query: 248 TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS 307
             R ++ANVE+FVEEIL+KTSAIVLSELTEETV KHGE LG VVSNSIK HLSSELNNLS
Sbjct: 241 NGRPTYANVEKFVEEILDKTSAIVLSELTEETVNKHGEHLGAVVSNSIKRHLSSELNNLS 300

Query: 308 MIFKNTAYTEGFHAGSSHKVKHAC 332
           MIFKN AYTEGFHAGSSHKVKHAC
Sbjct: 301 MIFKNVAYTEGFHAGSSHKVKHAC 323

[Close]

BLAST of MS004556 vs. ExPASy TrEMBL
Match: A0A6J1J0V9 (prolyl-tRNA synthetase associated domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111480300 PE=3 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 3.0e-150
Identity = 283/324 (87.35%), Postives = 294/324 (90.74%), Query Frame = 0


Query: 8   MAKEVYTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRY 67
           MAKEVYTREELLALLQD QI FSKYEHPAVLTVEAQAKYVGNLGGG+SKNLFLKDKKNRY
Sbjct: 1   MAKEVYTREELLALLQDLQIDFSKYEHPAVLTVEAQAKYVGNLGGGISKNLFLKDKKNRY 60

Query: 68  YIVSALADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVA 127
           Y+VSAL+ TKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLG VTPFALINKTARDVA
Sbjct: 61  YVVSALSQTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALINKTARDVA 120

Query: 128 LLLDQGFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPD 187
           LLLDQGFKSQEFCFFHPLSNETSISLN +NLDKFLK IGRDPSY+DLEANPSVGKDQPPD
Sbjct: 121 LLLDQGFKSQEFCFFHPLSNETSISLNTTNLDKFLKSIGRDPSYIDLEANPSVGKDQPPD 180

Query: 188 LAGLVPSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVP 247
           LAGLVPSG+AFVPDTPEK SSCP S EN GV D KKSK  A    KPS+AVK  KDK VP
Sbjct: 181 LAGLVPSGSAFVPDTPEKTSSCPGSNENQGVAD-KKSKAAA---VKPSSAVKAGKDKAVP 240

Query: 248 TVRTSHANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLS 307
             R S+ANVE+FVEEIL KTS IVLSELTEETV+KHGEQLG VVSN+IK HLSSELNNLS
Sbjct: 241 KARPSYANVEKFVEEILEKTSTIVLSELTEETVKKHGEQLGDVVSNNIKKHLSSELNNLS 300

Query: 308 MIFKNTAYTEGFHAGSSHKVKHAC 332
           MIFKN AYTEGFHAGSSHKVKH C
Sbjct: 301 MIFKNNAYTEGFHAGSSHKVKHTC 320

[Close]

BLAST of MS004556 vs. TAIR 10
Match: AT1G44835.1 (YbaK/aminoacyl-tRNA synthetase-associated domain )

HSP 1 Score: 331.6 bits (849), Expect = 7.0e-91
Identity = 180/316 (56.96%), Postives = 231/316 (73.10%), Query Frame = 0


Query: 13  YTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRYYIVSA 72
           +T+++LL  LQ+ +I +SKYEHP VLTVE QAKYV +  G LSKNLFLKDKK+RYYIVSA
Sbjct: 3   FTKDQLLDRLQELEIDYSKYEHPPVLTVEEQAKYVSSSKGALSKNLFLKDKKHRYYIVSA 62

Query: 73  LADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVALLLDQ 132
           + DTKVD+KVLS RLGLGKGG+RMAPEEALGE L+VSLG VTPFA++N++ARDV+LLLDQ
Sbjct: 63  MVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQVSLGCVTPFAVVNESARDVSLLLDQ 122

Query: 133 GFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPDLAGLV 192
            FK+Q  C FHPLSN+ S+SLN   LDKFLK IGRDP YVDLEANP VGKDQ PDLA  V
Sbjct: 123 KFKNQTRCIFHPLSNDVSVSLNTLGLDKFLKSIGRDPVYVDLEANPVVGKDQAPDLAVCV 182

Query: 193 PSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVPTVRTS 252
           PS +  VP+ P + SS    I     V  +   V +  T+KP+  VK   +   P   ++
Sbjct: 183 PSNSVIVPEIPNQTSS--TQIPLPKSVSAEVKPVASAKTSKPACKVKSVAENSAP---SA 242

Query: 253 HANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLSMIFKN 312
           + N E+FV+EIL+KTSA++LSE   E V          ++ +++  L+SEL +LS+++KN
Sbjct: 243 YKNPEKFVQEILDKTSALLLSEAKGECVE--------ALAETLRKRLTSELTHLSIMYKN 302

Query: 313 TAYTEGFHAGSSHKVK 329
           +AY EGF+AG+ H+ K
Sbjct: 303 SAYAEGFYAGTRHQPK 305

[Close]

BLAST of MS004556 vs. TAIR 10
Match: AT1G44835.2 (YbaK/aminoacyl-tRNA synthetase-associated domain )

HSP 1 Score: 330.1 bits (845), Expect = 2.0e-90
Identity = 180/316 (56.96%), Postives = 234/316 (74.05%), Query Frame = 0


Query: 13  YTREELLALLQDHQIHFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRYYIVSA 72
           +T+++LL  LQ+ +I +SKYEHP VLTVE QAKYV +  G LSKNLFLKDKK+RYYIVSA
Sbjct: 3   FTKDQLLDRLQELEIDYSKYEHPPVLTVEEQAKYVSSSKGALSKNLFLKDKKHRYYIVSA 62

Query: 73  LADTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGSVTPFALINKTARDVALLLDQ 132
           + DTKVD+KVLS RLGLGKGG+RMAPEEALGE L+VSLG VTPFA++N++ARDV+LLLDQ
Sbjct: 63  MVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQVSLGCVTPFAVVNESARDVSLLLDQ 122

Query: 133 GFKSQEFCFFHPLSNETSISLNASNLDKFLKVIGRDPSYVDLEANPSVGKDQPPDLAGLV 192
            FK+Q  C FHPLSN+ S+SLN   LDKFLK IGRDP YVDLEANP VGKDQ PDLA  V
Sbjct: 123 KFKNQTRCIFHPLSNDVSVSLNTLGLDKFLKSIGRDPVYVDLEANPVVGKDQAPDLAVCV 182

Query: 193 PSGTAFVPDTPEKASSCPNSIENHGVVDKKKSKVVAGDTAKPSTAVKVAKDKPVPTVRTS 252
           PS +  VP+ P + SS    I     V  +   V +  T+KP+  VK   +   P   ++
Sbjct: 183 PSNSVIVPEIPNQTSS--TQIPLPKSVSAEVKPVASAKTSKPACKVKSVAENSAP---SA 242

Query: 253 HANVEQFVEEILNKTSAIVLSELTEETVRKHGEQLGTVVSNSIKSHLSSELNNLSMIFKN 312
           + N E+FV+EIL+KTSA++LSE+ +      GE +   ++ +++  L+SEL +LS+++KN
Sbjct: 243 YKNPEKFVQEILDKTSALLLSEVAK------GECV-EALAETLRKRLTSELTHLSIMYKN 302

Query: 313 TAYTEGFHAGSSHKVK 329
           +AY EGF+AG+ H+ K
Sbjct: 303 SAYAEGFYAGTRHQPK 306

The following BLAST results are available for this feature:

BLAST of MS004556 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138900.1	6.6e-176	100.00	uncharacterized protein LOC111009964 [Momordica charantia]	[more]
KGN54578.1	2.3e-152	86.10	hypothetical protein Csa_012651 [Cucumis sativus]	[more]
XP_038898012.1	8.7e-152	88.89	prolyl-tRNA synthetase associated domain-containing protein 1 [Benincasa hispida...	[more]
XP_022941394.1	2.5e-151	88.27	prolyl-tRNA synthetase associated domain-containing protein 1 [Cucurbita moschat...	[more]
XP_008444132.1	9.7e-151	87.35	PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1 [Cucumi...	[more]

BLAST of MS004556 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NRL0	7.2e-24	42.07	Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Xenopus laevis ...	[more]
A6NEY8	2.1e-23	40.79	Putative prolyl-tRNA synthetase associated domain-containing protein 1 OS=Homo s...	[more]
A1A4Q2	1.0e-22	41.22	Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Bos taurus OX=9...	[more]
Q9D820	1.2e-21	38.41	Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Mus musculus OX...	[more]
Q6PFS2	2.7e-18	38.99	Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Danio rerio OX=...	[more]

BLAST of MS004556 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAT2	3.2e-176	100.00	uncharacterized protein LOC111009964 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A0A0KYL1	1.1e-152	86.10	tRNA_edit domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G370560 P...	[more]
A0A6J1FN76	1.2e-151	88.27	prolyl-tRNA synthetase associated domain-containing protein 1 OS=Cucurbita mosch...	[more]
A0A1S3BAG3	4.7e-151	87.35	prolyl-tRNA synthetase associated domain-containing protein 1 OS=Cucumis melo OX...	[more]
A0A6J1J0V9	3.0e-150	87.35	prolyl-tRNA synthetase associated domain-containing protein 1 OS=Cucurbita maxim...	[more]

BLAST of MS004556 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44835.1	7.0e-91	56.96	YbaK/aminoacyl-tRNA synthetase-associated domain	[more]
AT1G44835.2	2.0e-90	56.96	YbaK/aminoacyl-tRNA synthetase-associated domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007214	YbaK/aminoacyl-tRNA synthetase-associated domain	PFAM	PF04073	tRNA_edit	coord: 34..161 e-value: 8.6E-26 score: 90.4
IPR036754	YbaK/aminoacyl-tRNA synthetase-associated domain superfamily	GENE3D	3.90.960.10		coord: 7..181 e-value: 1.2E-54 score: 186.6
IPR036754	YbaK/aminoacyl-tRNA synthetase-associated domain superfamily	SUPERFAMILY	55826	YbaK/ProRS associated domain	coord: 14..174
None	No IPR available	PANTHER	PTHR31423:SF3	PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 13..328
None	No IPR available	CDD	cd04335	PrdX_deacylase	coord: 15..172 e-value: 3.58476E-64 score: 198.126
IPR040285	Prolyl-tRNA editing protein ProX/PRXD1	PANTHER	PTHR31423	YBAK DOMAIN-CONTAINING PROTEIN	coord: 13..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004556.1	MS004556.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0002161	aminoacyl-tRNA editing activity