MS004340 (gene) Bitter gourd (TR) v1

Overview


Name	MS004340
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transcription factor
Location	scaffold92: 1973384 .. 1976510 (+)
RNA-Seq Expression	MS004340
Synteny	MS004340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTGGATAAAGACGGTAAGAGCTCAATTTGGAGCCAAGAGCAGGACAAGGCATTTGAGAATGCTCTAGCCACTTATCCAGAGGATGCTTCATATCGTTGGGAGAAAATTGCGGCTGATGTACCTGGGAAAACGCTAGAAGAGATCAAATATCATTACGAGCTGTTGGTCAATGATGTTAAACAAATTGAATCTGGCTTCATTCCTCTCCCCTCCTATAGTTTTTCTTCTGATGATAATAGTGAATCTCGTGTTGGAAGCAAAGCTTCAAGATCAGACCAAGAGCGTAGAAAGGGGACTGCATGGACAGAGGACGAGCACAGGTAAACTTTTAATCTTCGAGTTTATTTTCTAACTTCTATTGACAGATGAATTGTCAAGTGTCTAGGATGAGGCAAATTCAACTTTTTCTAAGTCATTATAATAAATATAAATAGTGATTATTTGCTTTAGTCGGCAATTTGTCGATAAAGCTGTAGGGCATGCTGAATTGTGCCTGGCTTTCCTTATGTATGGATGCATATTAGCTTTTTGTCATCAACACTGATTATTAGCTATAACCTTAATTTCTCCATGGTCAACAAATAAGAACACTGTGTCTCTTTGAGGTCACTATTCTAGTTTGGAACCCTTATTATTATAAGTTTCAAAGACATGGATTTCTGCTTAAGTACCATGTTACTCCCTTGGTTGTTGATGAAGACAGGTCATTTAAAGAATAATGAATATGTTTAACTTAGGCTTATGCTCAATAAATGAGGGGCCTAGCAGGTTCATTATTTCTTGGCTTGTAATAGGGAGTGTAAGGGGGACGTTGGAGGAGGTGATCCTCTGCTCATTTTGGGGAGAGAGGGATACTGTTGTGGCAGGCTTGTTTATTTTGCTATTTTGTGGAGTATGTAGATTGAGAGAAACGGTAGAATTTTTAAAAGGATTGAGAGATCTTGGGTTGAAATTGGGGAGCTAGTTAGATTTACTACCTCTACGTGGGTGTCAATTTCTAAAACTTTTTGTAATTACCATTTTTTTTTAGTATAACAATTTGGGGATATGGGGGATTGAACCTCCGACCTTAAGGAAAGGAGTACATGCCAATTACCGCTGAGCTATGTTCATGTGGGCTTGTAATTACCAATTAAGTGTCATTCTTTTGGATTGAGTCTCTTCTTGTAGGTTGGTCCTCCTTTGGCAGGCTTGTTTTTGTATGCCCCTTGTACATTTTTTTGGTTATCCTCAACGAAAGAGGTTTCTTATAAAAATAATAATAATAATAATAAATGTGTCTGTTTTGATTCTATCTTTAATTTTCTTTAATGCGTTGATTTCTTATTCTTGACAAGAAAATTTTTACTGATGAAGAAACCTTTACTAGCTGTAAATAGACTATGAAATAAGAATAACAAAAATATGTGGTAAGCTCATTAAAACTACAATGGAAATAGGGCGTCAAAAAATTTTCCATCTCTCTTCTCAACTCTCATCCTTTCGGTTCTATGGTTTCCACTTCAAGTGGATTTGAATACCAAGATACCTTCTCGGGCTTTGATCATCAACCCTTATGGTTACCTGGACAAAACCAGTTTTTTTAGGAGTGGTTAGTTAGAATCACATTGAATTCTTTATTAATGGTTCATAATCATAGCAATTGTGCTGCTATCTTAATCTTATCATTGTACTTCATTAGCCATTGAGCTTTACACGTTCATGGAATAGATATCCCGTATTCTCATTCTTTTTTTTTGGTCTAATTAGAATTTGGAGGTAGTTCCTGTATGGATTGTTGGAACTGGAATACAACATGGGCAAAGTAATGTTGCTCAAGTACATAAACTAAAATAGACACAAGATAGAATAGGAGAAAAATGTTTGGTAGGAAGTTCCTTGGGGTTCGCCTTGCACACGAGAGTGTAACTCGATGTTGGAAGGAGGCTCTCCATCACCCTCCATTTAGAGATAGGGGTCAGTTTTTGTGGTAGGCCGGTTTCTTTCCTGTTTCTCTATGGGGTTTGTAGAATGAGAGAAATAATGGGATCTTTTGAGGAGTTTAGAGATCCTGAGAGGAGTTGTGGGCCCTTGCTCGGTTTCATATTTTCCTTTGGGTATCAATGTCCAAAGATTTTGTAATTACTCATTAGGTTTTAATCCTACTTGATTTGAGCCCACTTTTAGTTTAACGGCTTTAATTGAGCTGGTTGTTTTATGCCTTCTGTATTTTTTCATTCTTCTCAGCTCGGCTTTTCATCATTTTTTTATATAAAGAATGAAACTGGAACCCCAAACCCAGGAAGCTCACAAAAAATTCTTCCAATTGGTATTAGGATCGCATAAATTATAGCTGTTGGAAGGAGCGTATAATTTACACCACAAAAGAGCTAAATTGTATTAATCTTCTATTAATTCTCTTTTCTTAGATGCGCTGAATTTTACTCAGATAATTTACTAGCTATATTCCGGGCTTCACTAGAAAACTATTCAGTTGAAATTCGTCTTCCCCCCTCTCCCATCATCTAGCTTATCACATGTGTAAGGCTTTTGTTTGTTTGTTCTTTCACCATTGGTATATTTTCAGGGTTTATGATACTCTAGTCTTATTGTGCATCTCATGATTGACAATAATTATTAGTATGTAAGTAAATTTTGGGATCATACCACCCAGGCTTTACTTTTAGCATTTTTGATACCAAGCAGGCTATTTCTTCTCGGTTTGGATAAATATGGGAAAGGAGATTGGCGAAGTATATCTCGGAACTTCGTGGTGACGAGAACACCCACTCAAGTGGCCAGCCATGCCCAGAAGTACTTCATTCGTTTGAACTCGATGAACAAAGACAGAAGGCGCTCGAGCATTCACGATATCACTAATGTTGATAACAGAGATTTAGCAGCACCTCAAGGACCAATTACTGGTGAGGTCAATAATTCTCAAGGATCTTCTACCATCAAATCAACCAAACAACCTCCTCAACCACCTGCTGGGCCATCCGGTGTCGGGATAGGAGTGCCCTTTGTGTCGGCAGTTGGCACCCCAGTAAATACTCCACCACATATGGCGTATGCAGTCAGATCCCAGGTAATTGGCTCATTAGTTCCTAGACCAGCAGTAAATATGAGCCCGATGACATAT

mRNA sequence

ATGACAGTGGATAAAGACGGTAAGAGCTCAATTTGGAGCCAAGAGCAGGACAAGGCATTTGAGAATGCTCTAGCCACTTATCCAGAGGATGCTTCATATCGTTGGGAGAAAATTGCGGCTGATGTACCTGGGAAAACGCTAGAAGAGATCAAATATCATTACGAGCTGTTGGTCAATGATGTTAAACAAATTGAATCTGGCTTCATTCCTCTCCCCTCCTATAGTTTTTCTTCTGATGATAATAGTGAATCTCGTGTTGGAAGCAAAGCTTCAAGATCAGACCAAGAGCGTAGAAAGGGGACTGCATGGACAGAGGACGAGCACAGCAGGCTATTTCTTCTCGGTTTGGATAAATATGGGAAAGGAGATTGGCGAAGTATATCTCGGAACTTCGTGGTGACGAGAACACCCACTCAAGTGGCCAGCCATGCCCAGAAGTACTTCATTCGTTTGAACTCGATGAACAAAGACAGAAGGCGCTCGAGCATTCACGATATCACTAATGTTGATAACAGAGATTTAGCAGCACCTCAAGGACCAATTACTGGTGAGGTCAATAATTCTCAAGGATCTTCTACCATCAAATCAACCAAACAACCTCCTCAACCACCTGCTGGGCCATCCGGTGTCGGGATAGGAGTGCCCTTTGTGTCGGCAGTTGGCACCCCAGTAAATACTCCACCACATATGGCGTATGCAGTCAGATCCCAGGTAATTGGCTCATTAGTTCCTAGACCAGCAGTAAATATGAGCCCGATGACATAT

Coding sequence (CDS)

ATGACAGTGGATAAAGACGGTAAGAGCTCAATTTGGAGCCAAGAGCAGGACAAGGCATTTGAGAATGCTCTAGCCACTTATCCAGAGGATGCTTCATATCGTTGGGAGAAAATTGCGGCTGATGTACCTGGGAAAACGCTAGAAGAGATCAAATATCATTACGAGCTGTTGGTCAATGATGTTAAACAAATTGAATCTGGCTTCATTCCTCTCCCCTCCTATAGTTTTTCTTCTGATGATAATAGTGAATCTCGTGTTGGAAGCAAAGCTTCAAGATCAGACCAAGAGCGTAGAAAGGGGACTGCATGGACAGAGGACGAGCACAGCAGGCTATTTCTTCTCGGTTTGGATAAATATGGGAAAGGAGATTGGCGAAGTATATCTCGGAACTTCGTGGTGACGAGAACACCCACTCAAGTGGCCAGCCATGCCCAGAAGTACTTCATTCGTTTGAACTCGATGAACAAAGACAGAAGGCGCTCGAGCATTCACGATATCACTAATGTTGATAACAGAGATTTAGCAGCACCTCAAGGACCAATTACTGGTGAGGTCAATAATTCTCAAGGATCTTCTACCATCAAATCAACCAAACAACCTCCTCAACCACCTGCTGGGCCATCCGGTGTCGGGATAGGAGTGCCCTTTGTGTCGGCAGTTGGCACCCCAGTAAATACTCCACCACATATGGCGTATGCAGTCAGATCCCAGGTAATTGGCTCATTAGTTCCTAGACCAGCAGTAAATATGAGCCCGATGACATAT

Protein sequence

MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVNDVKQIESGFIPLPSYSFSSDDNSESRVGSKASRSDQERRKGTAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITNVDNRDLAAPQGPITGEVNNSQGSSTIKSTKQPPQPPAGPSGVGIGVPFVSAVGTPVNTPPHMAYAVRSQVIGSLVPRPAVNMSPMTY

Homology

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BLAST of MS004340 vs. NCBI nr
Match: XP_022139138.1 (transcription factor SRM1-like [Momordica charantia] >XP_022139139.1 transcription factor SRM1-like [Momordica charantia])

HSP 1 Score: 489.2 bits (1258), Expect = 2.2e-134
Identity = 251/256 (98.05%), Postives = 253/256 (98.83%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLV+D
Sbjct: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVDD 60

Query: 61  VKQIESGFIPLPSYSFSSDDNSESRVGSKASRSDQERRKGTAWTEDEHSRLFLLGLDKYG 120
           VKQIESGFIPLPSYSFSSDDNSESRVGSKASRSDQERRKGTAWTEDEH RLFLLGLDKYG
Sbjct: 61  VKQIESGFIPLPSYSFSSDDNSESRVGSKASRSDQERRKGTAWTEDEH-RLFLLGLDKYG 120

Query: 121 KGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITNVDNRDLAAPQGP 180
           KGDWRS+SRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITNVDNRDLAAPQGP
Sbjct: 121 KGDWRSMSRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITNVDNRDLAAPQGP 180

Query: 181 ITGEVNNSQGSSTIKSTKQPPQPPAGPSGVGIGVPFVSAVGTPVNT-PPHMAYAVRSQVI 240
           ITGEVNNSQGSSTIKSTKQPPQPPAGPS VGIGVPFVSAVGTPVNT PPHMAYAVRSQVI
Sbjct: 181 ITGEVNNSQGSSTIKSTKQPPQPPAGPSVVGIGVPFVSAVGTPVNTPPPHMAYAVRSQVI 240

Query: 241 GSLVPRPAVNMSPMTY 256
           GSLVPRPAVNMSPMTY
Sbjct: 241 GSLVPRPAVNMSPMTY 255

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BLAST of MS004340 vs. NCBI nr
Match: XP_004147105.1 (transcription factor SRM1 [Cucumis sativus] >XP_011655501.1 transcription factor SRM1 [Cucumis sativus] >XP_011655502.1 transcription factor SRM1 [Cucumis sativus] >XP_011655503.1 transcription factor SRM1 [Cucumis sativus] >XP_031741877.1 transcription factor SRM1 [Cucumis sativus] >KGN51566.1 hypothetical protein Csa_008369 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 3.4e-103
Identity = 217/292 (74.32%), Postives = 228/292 (78.08%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTVDK+ KSSIWS+EQDKAFENALATYPEDAS RWEKIA DVPGKTLEE+K HYELLV+D
Sbjct: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60

Query: 61  VKQIESGFIPLPSYSFSSD--------------------DNSESRVGSKASRSDQERRKG 120
           V QIESGFIPLPSYSFSSD                    DNSESR GSKA RSDQERRKG
Sbjct: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
           TAWTEDEH RLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 121 TAWTEDEH-RLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITNVDNRDLAAPQGPITGEVNN---SQGSSTIKSTKQPPQPPAGPSGVGI----- 240
           SSIHDIT+VDN D++APQGPITGE N+     G ST KSTKQPPQPP G  GVGI     
Sbjct: 181 SSIHDITSVDNGDVSAPQGPITGEANSYGGGGGGSTNKSTKQPPQPPIGSFGVGIYGAPT 240

Query: 241 -----GVPFVSAVGTP--VNTPP--HMAYAVRSQVIGSLVPRPAVNMSPMTY 256
                G PFVSAVGTP  VNTPP  HMAY+V      SL  RP VNMSP+TY
Sbjct: 241 VGQPVGGPFVSAVGTPIAVNTPPPAHMAYSV-----SSLATRPPVNMSPITY 286

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BLAST of MS004340 vs. NCBI nr
Match: XP_038892511.1 (transcription factor SRM1-like [Benincasa hispida] >XP_038892512.1 transcription factor SRM1-like [Benincasa hispida] >XP_038892513.1 transcription factor SRM1-like [Benincasa hispida] >XP_038892514.1 transcription factor SRM1-like [Benincasa hispida] >XP_038892515.1 transcription factor SRM1-like [Benincasa hispida] >XP_038892517.1 transcription factor SRM1-like [Benincasa hispida] >XP_038892518.1 transcription factor SRM1-like [Benincasa hispida] >XP_038892519.1 transcription factor SRM1-like [Benincasa hispida] >XP_038892520.1 transcription factor SRM1-like [Benincasa hispida] >XP_038892521.1 transcription factor SRM1-like [Benincasa hispida] >XP_038892522.1 transcription factor SRM1-like [Benincasa hispida])

HSP 1 Score: 384.0 bits (985), Expect = 9.9e-103
Identity = 212/287 (73.87%), Postives = 226/287 (78.75%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTVD+  KSSIWS+EQDKAFENALATYPEDAS RWEKI A +PGKTL+EIK HYELLV+D
Sbjct: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIVAAIPGKTLKEIKDHYELLVDD 60

Query: 61  VKQIESGFIPLPSYSFSS--------------------DDNSESRVGSKASRSDQERRKG 120
           V QIESGF+PLPSYSFSS                     DNSES  GSKASRSDQERRKG
Sbjct: 61  VNQIESGFVPLPSYSFSSYGSTSHASEEGTGKKGDYHGIDNSESHNGSKASRSDQERRKG 120

Query: 121 TAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
           TAWTEDEH RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 121 TAWTEDEH-RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITNVDNRDLAAPQGPITGEVNNSQGSSTIKSTKQPPQPPAGPSGVGI-------- 240
           SSIHDIT+VDN DL+APQGPITGE N+  G ST KSTKQP +PP G SGVGI        
Sbjct: 181 SSIHDITSVDNGDLSAPQGPITGEANSCGGGSTNKSTKQPSRPPTGSSGVGIYSAPTVGQ 240

Query: 241 --GVPFVSAVGTPVNTPP--HMAYAVRSQVIGSLVPRPAVNMSPMTY 256
             G PFVSA+GTPVNTPP  H+AYAV      SLV +P VNMSP+TY
Sbjct: 241 PVGWPFVSAIGTPVNTPPPAHVAYAV-----SSLVTKPPVNMSPITY 281

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BLAST of MS004340 vs. NCBI nr
Match: XP_008445896.1 (PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_008445897.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_008445898.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_016900315.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_016900316.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_016900317.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_016900318.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_016900319.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >KAA0034084.1 transcription factor DIVARICATA [Cucumis melo var. makuwa])

HSP 1 Score: 377.1 bits (967), Expect = 1.2e-100
Identity = 213/293 (72.70%), Postives = 227/293 (77.47%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTVD++ KSSIWS+EQDKAFENALATYPEDAS RWEKIA DVPGKTL+EIK HYELLV+D
Sbjct: 1   MTVDEERKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLKEIKDHYELLVDD 60

Query: 61  VKQIESGFIPLPSYSFSSD--------------------DNSESRVGSKASRSDQERRKG 120
           V QIESGF+PLPSYSFSSD                    DNSESR GSKA RSDQERRKG
Sbjct: 61  VNQIESGFVPLPSYSFSSDGSPSHASEEGSGKKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
           TAWTEDEH RLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 121 TAWTEDEH-RLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITNVDNRDLAAPQGPITGEVNN----SQGSSTIKSTKQPPQPPAGPSGVGI---- 240
           SSIHDIT+VDN D++APQGPITGE N+      G ST KSTKQPPQPP G  GVGI    
Sbjct: 181 SSIHDITSVDNGDVSAPQGPITGEANSYGGVGGGGSTNKSTKQPPQPPIGSFGVGIYGAP 240

Query: 241 ------GVPFVSAVGTP--VNT--PPHMAYAVRSQVIGSLVPRPAVNMSPMTY 256
                 G PFVSAVGTP  VNT  P HM Y+V      SL  RP+VNMSP+TY
Sbjct: 241 TVGQPVGGPFVSAVGTPVAVNTPSPAHMPYSV-----SSLATRPSVNMSPITY 287

[Close]

BLAST of MS004340 vs. NCBI nr
Match: KAF3455970.1 (hypothetical protein FNV43_RR00613 [Rhamnella rubrinervis])

HSP 1 Score: 369.8 bits (948), Expect = 1.9e-98
Identity = 200/287 (69.69%), Postives = 221/287 (77.00%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTVD+ G  S+W++EQDKAFENALAT+PEDAS RWEKIAADVPGKTLEEIK+HY+LLV+D
Sbjct: 1   MTVDEGGSRSLWTREQDKAFENALATHPEDASDRWEKIAADVPGKTLEEIKHHYDLLVDD 60

Query: 61  VKQIESGFIPLPSYSFSSDD--------------------NSESRVGSKASRSDQERRKG 120
           V QIESG +PLP+Y+ SS+                     +SES  GSKASRSDQERRKG
Sbjct: 61  VNQIESGCVPLPNYNSSSEGSTSHAADEGTGRKGGHTGNYSSESNHGSKASRSDQERRKG 120

Query: 121 TAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
            AWTEDEH RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 121 IAWTEDEH-RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITNVDNRDLAAPQGPITGEVNNSQGSSTIKSTKQPPQPPAGPSGVG--------- 240
           SSIHDIT+V N D+A PQGPITG+ N S G S+ K TKQ PQP AGP GVG         
Sbjct: 181 SSIHDITSVGNGDIAGPQGPITGQANGSSGGSSGKPTKQSPQPAAGPPGVGMYGAPTIGQ 240

Query: 241 -IGVPFVSAVGTPVNTP--PHMAYAVRSQVIGSLVPRPAVNMSPMTY 256
            IG P VSAVGTPVN P  PHMAY VR+ V G++VP   +NM PMTY
Sbjct: 241 PIGGPLVSAVGTPVNLPAAPHMAYGVRASVAGAVVPGAPMNMGPMTY 286

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BLAST of MS004340 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.8e-75
Identity = 167/289 (57.79%), Postives = 196/289 (67.82%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTV++    S+WS+E D AFE ALA   +++  RWEKIAADVPGK++E+IK HYELLV D
Sbjct: 1   MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED 60

Query: 61  VKQIESGFIPLPSY-------SFSSDDNSESRVGSKA----------SRSDQERRKGTAW 120
           V +IESG +PLP+Y         + D+ + S+ G  +          S+SDQERRKG AW
Sbjct: 61  VTRIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAW 120

Query: 121 TEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 180
           TEDEH RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI
Sbjct: 121 TEDEH-RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 180

Query: 181 HDITNVDNRDLAAPQGPITGE--------VNNSQGSSTI-----KSTKQP-PQPPAGPSG 240
           HDIT+V N D++ PQGPITG+         NN+  S  +     KS KQ   Q P GP  
Sbjct: 181 HDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPGPPM 240

Query: 241 VGIGVPFVSAVGTPVN--TPPHMAYAVR-SQVIGSLVPRPAVNMSPMTY 256
            G       AVGTPVN   PPHMAY V  + V GS+VP  A+N+  M Y
Sbjct: 241 YGTPAIGQPAVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQMPY 288

[Close]

BLAST of MS004340 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.7e-46
Identity = 128/273 (46.89%), Postives = 160/273 (58.61%), Query Frame = 0


Query: 9   SSIWSQEQDKAFENALATY----PEDASYR----WEKIAADVPG-KTLEEIKYHYELLVN 68
           ++ W++E DKAFENALA      P D        +  +AA VPG ++ EE++ HYE LV 
Sbjct: 15  AAAWTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRHYEALVE 74

Query: 69  DVKQIESGFIPLPSY---------------SFSSDDNSESR-----------VGSKASRS 128
           DV  I++G +PLP Y               + +S D    R            G   S++
Sbjct: 75  DVAAIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGGYDGGKSCSKA 134

Query: 129 DQERRKGTAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNS 188
           +QERRKG  WTE+EH RLFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFIRLNS
Sbjct: 135 EQERRKGIPWTEEEH-RLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNS 194

Query: 189 MNKDRRRSSIHDITNVDNRD-LAAPQG-PITG-EVNNSQGSSTI------------KSTK 229
           MN+DRRRSSIHDIT+V   D +AA QG PITG +   +  ++ +                
Sbjct: 195 MNRDRRRSSIHDITSVTAGDQVAAQQGAPITGHQATGNPAAAALGPPGMKHHHHHHPGGA 254

[Close]

BLAST of MS004340 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.7e-46
Identity = 128/273 (46.89%), Postives = 160/273 (58.61%), Query Frame = 0


Query: 9   SSIWSQEQDKAFENALATY----PEDASYR----WEKIAADVPG-KTLEEIKYHYELLVN 68
           ++ W++E DKAFENALA      P D        +  +AA VPG ++ EE++ HYE LV 
Sbjct: 15  AAAWTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRHYEALVE 74

Query: 69  DVKQIESGFIPLPSY---------------SFSSDDNSESR-----------VGSKASRS 128
           DV  I++G +PLP Y               + +S D    R            G   S++
Sbjct: 75  DVAAIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGGYDGGKSCSKA 134

Query: 129 DQERRKGTAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNS 188
           +QERRKG  WTE+EH RLFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFIRLNS
Sbjct: 135 EQERRKGIPWTEEEH-RLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNS 194

Query: 189 MNKDRRRSSIHDITNVDNRD-LAAPQG-PITG-EVNNSQGSSTI------------KSTK 229
           MN+DRRRSSIHDIT+V   D +AA QG PITG +   +  ++ +                
Sbjct: 195 MNRDRRRSSIHDITSVTAGDQVAAQQGAPITGHQATGNPAAAALGPPGMKHHHHHHPGGA 254

[Close]

BLAST of MS004340 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.0e-45
Identity = 97/192 (50.52%), Postives = 127/192 (66.15%), Query Frame = 0


Query: 3   VDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVNDVK 62
           +++   ++ W+  ++KAFENALA + E+   RWE++A  VPGKT+ ++   Y+ L +DV 
Sbjct: 17  LEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVS 76

Query: 63  QIESGFIPLPSYSFSSDDNSE-----------------SRVGSKASRSDQERRKGTAWTE 122
            IE+GF+P+P YS SS    E                  R  S    S+QER+KG  WTE
Sbjct: 77  SIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRPSEQERKKGVPWTE 136

Query: 123 DEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHD 178
           +EH +LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  KD+RR+SIHD
Sbjct: 137 EEH-KLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHD 196

[Close]

BLAST of MS004340 vs. ExPASy Swiss-Prot
Match: Q9FKF9 (Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g61620 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-23
Identity = 60/120 (50.00%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 81  NSESRVGSKASRSDQERRKGTAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQV 140
           +S+ ++ SK  ++  E++KG  WTE+EH R FL+GL+K GKGDWR I+++FV TRTPTQV
Sbjct: 88  HSDGQIHSKKGKTAHEKKKGKPWTEEEH-RNFLIGLNKLGKGDWRGIAKSFVSTRTPTQV 147

Query: 141 ASHAQKYFIRLNSMNKDRRRSSIHDITNVDNRDLAAPQGPITGEVNNSQGSSTIKSTKQP 200
           ASHAQKYFIRLN  +K +RR+S+ DI+  D ++          +  NSQ +ST    KQP
Sbjct: 148 ASHAQKYFIRLNVNDKRKRRASLFDISLEDQKE----------KERNSQDASTKTPPKQP 196

[Close]

BLAST of MS004340 vs. ExPASy TrEMBL
Match: A0A6J1CC30 (transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111010117 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 251/256 (98.05%), Postives = 253/256 (98.83%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLV+D
Sbjct: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVDD 60

Query: 61  VKQIESGFIPLPSYSFSSDDNSESRVGSKASRSDQERRKGTAWTEDEHSRLFLLGLDKYG 120
           VKQIESGFIPLPSYSFSSDDNSESRVGSKASRSDQERRKGTAWTEDEH RLFLLGLDKYG
Sbjct: 61  VKQIESGFIPLPSYSFSSDDNSESRVGSKASRSDQERRKGTAWTEDEH-RLFLLGLDKYG 120

Query: 121 KGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITNVDNRDLAAPQGP 180
           KGDWRS+SRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITNVDNRDLAAPQGP
Sbjct: 121 KGDWRSMSRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITNVDNRDLAAPQGP 180

Query: 181 ITGEVNNSQGSSTIKSTKQPPQPPAGPSGVGIGVPFVSAVGTPVNT-PPHMAYAVRSQVI 240
           ITGEVNNSQGSSTIKSTKQPPQPPAGPS VGIGVPFVSAVGTPVNT PPHMAYAVRSQVI
Sbjct: 181 ITGEVNNSQGSSTIKSTKQPPQPPAGPSVVGIGVPFVSAVGTPVNTPPPHMAYAVRSQVI 240

Query: 241 GSLVPRPAVNMSPMTY 256
           GSLVPRPAVNMSPMTY
Sbjct: 241 GSLVPRPAVNMSPMTY 255

[Close]

BLAST of MS004340 vs. ExPASy TrEMBL
Match: A0A0A0KV25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G579040 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.6e-103
Identity = 217/292 (74.32%), Postives = 228/292 (78.08%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTVDK+ KSSIWS+EQDKAFENALATYPEDAS RWEKIA DVPGKTLEE+K HYELLV+D
Sbjct: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60

Query: 61  VKQIESGFIPLPSYSFSSD--------------------DNSESRVGSKASRSDQERRKG 120
           V QIESGFIPLPSYSFSSD                    DNSESR GSKA RSDQERRKG
Sbjct: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
           TAWTEDEH RLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 121 TAWTEDEH-RLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITNVDNRDLAAPQGPITGEVNN---SQGSSTIKSTKQPPQPPAGPSGVGI----- 240
           SSIHDIT+VDN D++APQGPITGE N+     G ST KSTKQPPQPP G  GVGI     
Sbjct: 181 SSIHDITSVDNGDVSAPQGPITGEANSYGGGGGGSTNKSTKQPPQPPIGSFGVGIYGAPT 240

Query: 241 -----GVPFVSAVGTP--VNTPP--HMAYAVRSQVIGSLVPRPAVNMSPMTY 256
                G PFVSAVGTP  VNTPP  HMAY+V      SL  RP VNMSP+TY
Sbjct: 241 VGQPVGGPFVSAVGTPIAVNTPPPAHMAYSV-----SSLATRPPVNMSPITY 286

[Close]

BLAST of MS004340 vs. ExPASy TrEMBL
Match: A0A1S4DWF8 (transcription factor DIVARICATA OS=Cucumis melo OX=3656 GN=LOC103488780 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.8e-101
Identity = 213/293 (72.70%), Postives = 227/293 (77.47%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTVD++ KSSIWS+EQDKAFENALATYPEDAS RWEKIA DVPGKTL+EIK HYELLV+D
Sbjct: 1   MTVDEERKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLKEIKDHYELLVDD 60

Query: 61  VKQIESGFIPLPSYSFSSD--------------------DNSESRVGSKASRSDQERRKG 120
           V QIESGF+PLPSYSFSSD                    DNSESR GSKA RSDQERRKG
Sbjct: 61  VNQIESGFVPLPSYSFSSDGSPSHASEEGSGKKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
           TAWTEDEH RLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 121 TAWTEDEH-RLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITNVDNRDLAAPQGPITGEVNN----SQGSSTIKSTKQPPQPPAGPSGVGI---- 240
           SSIHDIT+VDN D++APQGPITGE N+      G ST KSTKQPPQPP G  GVGI    
Sbjct: 181 SSIHDITSVDNGDVSAPQGPITGEANSYGGVGGGGSTNKSTKQPPQPPIGSFGVGIYGAP 240

Query: 241 ------GVPFVSAVGTP--VNT--PPHMAYAVRSQVIGSLVPRPAVNMSPMTY 256
                 G PFVSAVGTP  VNT  P HM Y+V      SL  RP+VNMSP+TY
Sbjct: 241 TVGQPVGGPFVSAVGTPVAVNTPSPAHMPYSV-----SSLATRPSVNMSPITY 287

[Close]

BLAST of MS004340 vs. ExPASy TrEMBL
Match: A0A5A7SSA2 (Transcription factor DIVARICATA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00720 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.8e-101
Identity = 213/293 (72.70%), Postives = 227/293 (77.47%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTVD++ KSSIWS+EQDKAFENALATYPEDAS RWEKIA DVPGKTL+EIK HYELLV+D
Sbjct: 1   MTVDEERKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLKEIKDHYELLVDD 60

Query: 61  VKQIESGFIPLPSYSFSSD--------------------DNSESRVGSKASRSDQERRKG 120
           V QIESGF+PLPSYSFSSD                    DNSESR GSKA RSDQERRKG
Sbjct: 61  VNQIESGFVPLPSYSFSSDGSPSHASEEGSGKKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
           TAWTEDEH RLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 121 TAWTEDEH-RLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITNVDNRDLAAPQGPITGEVNN----SQGSSTIKSTKQPPQPPAGPSGVGI---- 240
           SSIHDIT+VDN D++APQGPITGE N+      G ST KSTKQPPQPP G  GVGI    
Sbjct: 181 SSIHDITSVDNGDVSAPQGPITGEANSYGGVGGGGSTNKSTKQPPQPPIGSFGVGIYGAP 240

Query: 241 ------GVPFVSAVGTP--VNT--PPHMAYAVRSQVIGSLVPRPAVNMSPMTY 256
                 G PFVSAVGTP  VNT  P HM Y+V      SL  RP+VNMSP+TY
Sbjct: 241 TVGQPVGGPFVSAVGTPVAVNTPSPAHMPYSV-----SSLATRPSVNMSPITY 287

[Close]

BLAST of MS004340 vs. ExPASy TrEMBL
Match: A0A6P4A0S3 (transcription factor SRM1 OS=Ziziphus jujuba OX=326968 GN=LOC107421964 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.7e-98
Identity = 197/287 (68.64%), Postives = 219/287 (76.31%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTVD++G SS+W++EQDKAFENALAT+PEDAS  WEKIAADVPGKTLEE+K+HYELL  D
Sbjct: 1   MTVDEEGSSSLWTREQDKAFENALATHPEDASDWWEKIAADVPGKTLEEVKHHYELLAED 60

Query: 61  VKQIESGFIPLPSYSFSSDD--------------------NSESRVGSKASRSDQERRKG 120
           VKQIESG +PLP Y+ SS+                     +SES  GSK SRSDQERRKG
Sbjct: 61  VKQIESGCVPLPCYNSSSEGSTSHAGDEGTGKKGGHTGNYSSESNHGSKTSRSDQERRKG 120

Query: 121 TAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
            AWTEDEH RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 121 IAWTEDEH-RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITNVDNRDLAAPQGPITGEVNNSQGSSTIKSTKQPPQPPAGPSGVG--------- 240
           SSIHDIT+V N D++  QGPITG+ N S G S  KSTKQPPQPPAGP GVG         
Sbjct: 181 SSIHDITSVGNTDISGAQGPITGQANGSAGGSASKSTKQPPQPPAGPPGVGMYGAPTIGQ 240

Query: 241 -IGVPFVSAVGTPVNTP--PHMAYAVRSQVIGSLVPRPAVNMSPMTY 256
            +G P VSAVGTPVN P  PH+AY VR+ V G++VP   +NM PM Y
Sbjct: 241 PVGGPLVSAVGTPVNLPSAPHIAYGVRAPVAGAMVPGAPMNMGPMPY 286

[Close]

BLAST of MS004340 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 283.9 bits (725), Expect = 1.3e-76
Identity = 167/289 (57.79%), Postives = 196/289 (67.82%), Query Frame = 0


Query: 1   MTVDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVND 60
           MTV++    S+WS+E D AFE ALA   +++  RWEKIAADVPGK++E+IK HYELLV D
Sbjct: 1   MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED 60

Query: 61  VKQIESGFIPLPSY-------SFSSDDNSESRVGSKA----------SRSDQERRKGTAW 120
           V +IESG +PLP+Y         + D+ + S+ G  +          S+SDQERRKG AW
Sbjct: 61  VTRIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAW 120

Query: 121 TEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 180
           TEDEH RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI
Sbjct: 121 TEDEH-RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 180

Query: 181 HDITNVDNRDLAAPQGPITGE--------VNNSQGSSTI-----KSTKQP-PQPPAGPSG 240
           HDIT+V N D++ PQGPITG+         NN+  S  +     KS KQ   Q P GP  
Sbjct: 181 HDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPGPPM 240

Query: 241 VGIGVPFVSAVGTPVN--TPPHMAYAVR-SQVIGSLVPRPAVNMSPMTY 256
            G       AVGTPVN   PPHMAY V  + V GS+VP  A+N+  M Y
Sbjct: 241 YGTPAIGQPAVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMNIGQMPY 288

[Close]

BLAST of MS004340 vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 1.0e-52
Identity = 127/266 (47.74%), Postives = 163/266 (61.28%), Query Frame = 0


Query: 12  WSQEQDKAFENALATY---PEDASYRWEKIAADVPGKTLEEIKYHYELLVNDVKQIESGF 71
           WS+E++KAFENA+A +    E    +W K+++ VP K LEE+K HY++L+ DVK IE+G 
Sbjct: 8   WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQ 67

Query: 72  IPLPSY----------------------SFSSDDN-----------SESRVG-SKASRSD 131
           +PLP Y                      S SS  +           S S  G S  SR++
Sbjct: 68  VPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRSGGSRAE 127

Query: 132 QERRKGTAWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSM 191
           QERRKG  WTE+EH RLFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFIRLNSM
Sbjct: 128 QERRKGIPWTEEEH-RLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSM 187

Query: 192 NKDRRRSSIHDITNVDNRDLAAPQGPITGEVNNSQGSSTIKSTKQPPQPPAGPSGVGIGV 240
           N+DRRRSSIHDIT V+N+  A   G    +V   + +      +  PQ    P+  G+G+
Sbjct: 188 NRDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAQPQPQPQPQPQQHHPPTMAGLGM 247

[Close]

BLAST of MS004340 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 2.2e-44
Identity = 94/169 (55.62%), Postives = 121/169 (71.60%), Query Frame = 0


Query: 9   SSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVNDVKQIESGF 68
           SS W++ +DK FE AL  +PE +  RWE+I AD   K+  E++ HYE+LV+DV +I+SG 
Sbjct: 3   SSQWTRSEDKMFEQALVLFPEGSPNRWERI-ADQLHKSAGEVREHYEVLVHDVFEIDSGR 62

Query: 69  IPLPSYSFSS-------DDNSESRVGSKASRSDQERRKGTAWTEDEHSRLFLLGLDKYGK 128
           + +P Y   S       D   +   GSK    + ER++GT WTE+EH +LFL+GL +YGK
Sbjct: 63  VDVPDYMDDSAAAAAGWDSAGQISFGSK--HGESERKRGTPWTENEH-KLFLIGLKRYGK 122

Query: 129 GDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITNVD 171
           GDWRSISRN VVTRTPTQVASHAQKYF+R NS+ K+R+RSSIHDIT VD
Sbjct: 123 GDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVD 167

[Close]

BLAST of MS004340 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 173.7 bits (439), Expect = 1.9e-43
Identity = 96/192 (50.00%), Postives = 125/192 (65.10%), Query Frame = 0


Query: 3   VDKDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVNDVK 62
           V   G+ + W+  ++KAFENALA Y ++   RW+K+AA +PGKT+ ++   Y  L  DV 
Sbjct: 25  VAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVS 84

Query: 63  QIESGFIPLPSYSFSSDDNSESRVG-----------------SKASRSDQ-ERRKGTAWT 122
            IE+G IP+P Y  S     +   G                 S+A RS + ER+KG  WT
Sbjct: 85  SIEAGLIPVPGYITSPPFTLDWAGGGGGCNGFKPGHQVCNKRSQAGRSPELERKKGVPWT 144

Query: 123 EDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIH 177
           E+EH +LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  KD+RR+SIH
Sbjct: 145 EEEH-KLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIH 204

[Close]

BLAST of MS004340 vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-42
Identity = 96/198 (48.48%), Postives = 125/198 (63.13%), Query Frame = 0


Query: 5   KDGKSSIWSQEQDKAFENALATYPEDASYRWEKIAADVPGKTLEEIKYHYELLVNDVKQI 64
           ++ + + W+ E++K FENALA Y +D   RW ++AA +PGKT+ ++   Y  L  DV  I
Sbjct: 22  QENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDI 81

Query: 65  ESGFIPLPSY---SFSSD--------------------DNSESRVGSKASRSDQERRKGT 124
           E+G IP+P Y   SF+ D                      +  + GS A  ++ ER+KG 
Sbjct: 82  EAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNGYYFSAAGGKRGSAARTAEHERKKGV 141

Query: 125 AWTEDEHSRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 177
            WTE+EH R FL+GL KYGKGDWR+I+RNFV TRTPTQVASHAQKYFIR  +  KD+RRS
Sbjct: 142 PWTEEEH-RQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDKRRS 201

The following BLAST results are available for this feature:

BLAST of MS004340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139138.1	2.2e-134	98.05	transcription factor SRM1-like [Momordica charantia] >XP_022139139.1 transcripti...	[more]
XP_004147105.1	3.4e-103	74.32	transcription factor SRM1 [Cucumis sativus] >XP_011655501.1 transcription factor...	[more]
XP_038892511.1	9.9e-103	73.87	transcription factor SRM1-like [Benincasa hispida] >XP_038892512.1 transcription...	[more]
XP_008445896.1	1.2e-100	72.70	PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_008445897.1 PREDIC...	[more]
KAF3455970.1	1.9e-98	69.69	hypothetical protein FNV43_RR00613 [Rhamnella rubrinervis]	[more]

BLAST of MS004340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNN6	1.8e-75	57.79	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
B8A9B2	6.7e-46	46.89	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	6.7e-46	46.89	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q8S9H7	2.0e-45	50.52	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q9FKF9	2.1e-23	50.00	Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g6...	[more]

BLAST of MS004340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CC30	1.1e-134	98.05	transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111010117 PE...	[more]
A0A0A0KV25	1.6e-103	74.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G579040 PE=4 SV=1	[more]
A0A1S4DWF8	5.8e-101	72.70	transcription factor DIVARICATA OS=Cucumis melo OX=3656 GN=LOC103488780 PE=4 SV=...	[more]
A0A5A7SSA2	5.8e-101	72.70	Transcription factor DIVARICATA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6P4A0S3	2.7e-98	68.64	transcription factor SRM1 OS=Ziziphus jujuba OX=326968 GN=LOC107421964 PE=4 SV=1	[more]

BLAST of MS004340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08520.1	1.3e-76	57.79	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	1.0e-52	47.74	Duplicated homeodomain-like superfamily protein	[more]
AT5G04760.1	2.2e-44	55.62	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	1.9e-43	50.00	Homeodomain-like transcriptional regulator	[more]
AT2G38090.1	1.2e-42	48.48	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 99..150 e-value: 1.4E-7 score: 41.1 coord: 8..60 e-value: 4.4E-9 score: 46.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 4..58 score: 6.910785
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 95..148 score: 6.097918
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 102..148 e-value: 1.48632E-8 score: 47.5702
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..58 e-value: 7.92564E-10 score: 51.4222
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 100..150 e-value: 3.3E-15 score: 54.1
None	No IPR available	GENE3D	1.10.10.60		coord: 3..71 e-value: 1.0E-21 score: 78.4
None	No IPR available	GENE3D	1.10.10.60		coord: 101..154 e-value: 1.0E-13 score: 53.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..102
None	No IPR available	PANTHER	PTHR44191:SF23	HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED	coord: 7..252
None	No IPR available	PANTHER	PTHR44191	TRANSCRIPTION FACTOR KUA1	coord: 7..252
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 102..147 e-value: 1.9E-9 score: 37.6 coord: 12..54 e-value: 9.3E-7 score: 28.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 95..152 score: 15.256241
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 101..152 score: 9.767865
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 97..153
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 10..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004340.1	MS004340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding