MS004299 (gene) Bitter gourd (TR) v1

BLAST of MS004299 vs. NCBI nr
Match: XP_022138958.1 (DNA-directed RNA polymerase III subunit 2 [Momordica charantia])

HSP 1 Score: 1827.0 bits (4731), Expect = 0.0e+00
Identity = 927/1038 (89.31%), Postives = 928/1038 (89.40%), Query Frame = 0

Query: 3    IRYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 62
            + YAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP
Sbjct: 121  LTYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 180

Query: 63   LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 122
            LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
Sbjct: 181  LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 240

Query: 123  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE----------- 182
            MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE           
Sbjct: 241  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIEECAKEKVYTQE 300

Query: 183  ----------------------EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 242
                                  EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM
Sbjct: 301  QALEYLETKVKKFQFASAPAEKEGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 360

Query: 243  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 302
            DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD
Sbjct: 361  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 420

Query: 303  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 362
            FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
Sbjct: 421  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 480

Query: 363  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 422
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGL                             
Sbjct: 481  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCMGVE 540

Query: 423  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 482
                                            YFATAMRKLRRAGKIGEFVSVFVNEKQH
Sbjct: 541  DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATAMRKLRRAGKIGEFVSVFVNEKQH 600

Query: 483  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 542
            CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA
Sbjct: 601  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 660

Query: 543  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY---------------Q 602
            LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY               Q
Sbjct: 661  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 720

Query: 603  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 662
            LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 721  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 780

Query: 663  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 722
            LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN
Sbjct: 781  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 840

Query: 723  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 782
            DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI
Sbjct: 841  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 900

Query: 783  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 842
            IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 960

Query: 843  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 902
            ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 1020

Query: 903  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 932
            AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

BLAST of MS004299 vs. NCBI nr
Match: XP_038903912.1 (DNA-directed RNA polymerase III subunit 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 1793.5 bits (4644), Expect = 0.0e+00
Identity = 904/1038 (87.09%), Postives = 922/1038 (88.82%), Query Frame = 0

Query: 3    IRYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 62
            + YAAPILVDIEYIEE+HAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP
Sbjct: 121  LTYAAPILVDIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 180

Query: 63   LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 122
            LDPGGYF+IKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
Sbjct: 181  LDPGGYFIIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 240

Query: 123  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE----------- 182
            +YLQLNIFTTPKIPIMVVLKAMGMESIQE+VQMVGRDPRYGALLLPSIE           
Sbjct: 241  IYLQLNIFTTPKIPIMVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQE 300

Query: 183  ----------------------EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 242
                                  EGRALGILRDVF+ANVPVHKNNFRPKCIYVAVM+RRMM
Sbjct: 301  QALEYLETKVKKFQFASAPPEKEGRALGILRDVFLANVPVHKNNFRPKCIYVAVMMRRMM 360

Query: 243  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 302
            DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD
Sbjct: 361  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 420

Query: 303  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 362
            FSQHLNSNII+FGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
Sbjct: 421  FSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 480

Query: 363  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 422
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGL                             
Sbjct: 481  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVE 540

Query: 423  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 482
                                            YFAT MR LRRAGKIGEFVSVFVNEKQH
Sbjct: 541  DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQH 600

Query: 483  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 542
            CVYIASDGGRVCRPLVIADKGVSRIKE+HMKELSDGVRTFDDFLR+GLIEYLDVNEENNA
Sbjct: 601  CVYIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNA 660

Query: 543  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY---------------Q 602
            LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY               Q
Sbjct: 661  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 720

Query: 603  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 662
            L RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 721  LRRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 780

Query: 663  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 722
            LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRN+DF GNMQILDDDGLAAPGEIIRPN
Sbjct: 781  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPN 840

Query: 723  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 782
            DVYVNKQSP+ITKGSPLPGIPDSAYRPCRQ FKGSEGEPTVVDRVALSTDKNDCLCIKF+
Sbjct: 841  DVYVNKQSPIITKGSPLPGIPDSAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFL 900

Query: 783  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 842
            IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERG+CPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 843  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 902
            ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 1020

Query: 903  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 932
            AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

BLAST of MS004299 vs. NCBI nr
Match: XP_038903913.1 (DNA-directed RNA polymerase III subunit 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 1793.5 bits (4644), Expect = 0.0e+00
Identity = 904/1038 (87.09%), Postives = 922/1038 (88.82%), Query Frame = 0

Query: 3    IRYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 62
            + YAAPILVDIEYIEE+HAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP
Sbjct: 7    LTYAAPILVDIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 66

Query: 63   LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 122
            LDPGGYF+IKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
Sbjct: 67   LDPGGYFIIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 126

Query: 123  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE----------- 182
            +YLQLNIFTTPKIPIMVVLKAMGMESIQE+VQMVGRDPRYGALLLPSIE           
Sbjct: 127  IYLQLNIFTTPKIPIMVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQE 186

Query: 183  ----------------------EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 242
                                  EGRALGILRDVF+ANVPVHKNNFRPKCIYVAVM+RRMM
Sbjct: 187  QALEYLETKVKKFQFASAPPEKEGRALGILRDVFLANVPVHKNNFRPKCIYVAVMMRRMM 246

Query: 243  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 302
            DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD
Sbjct: 247  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 306

Query: 303  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 362
            FSQHLNSNII+FGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
Sbjct: 307  FSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 366

Query: 363  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 422
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGL                             
Sbjct: 367  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVE 426

Query: 423  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 482
                                            YFAT MR LRRAGKIGEFVSVFVNEKQH
Sbjct: 427  DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQH 486

Query: 483  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 542
            CVYIASDGGRVCRPLVIADKGVSRIKE+HMKELSDGVRTFDDFLR+GLIEYLDVNEENNA
Sbjct: 487  CVYIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNA 546

Query: 543  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY---------------Q 602
            LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY               Q
Sbjct: 547  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 606

Query: 603  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 662
            L RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 607  LRRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 666

Query: 663  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 722
            LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRN+DF GNMQILDDDGLAAPGEIIRPN
Sbjct: 667  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPN 726

Query: 723  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 782
            DVYVNKQSP+ITKGSPLPGIPDSAYRPCRQ FKGSEGEPTVVDRVALSTDKNDCLCIKF+
Sbjct: 727  DVYVNKQSPIITKGSPLPGIPDSAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFL 786

Query: 783  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 842
            IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERG+CPDLIMNPHGFPSRMTVGKMI
Sbjct: 787  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 846

Query: 843  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 902
            ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ
Sbjct: 847  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 906

Query: 903  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 932
            AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
Sbjct: 907  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 966

BLAST of MS004299 vs. NCBI nr
Match: XP_004141655.2 (DNA-directed RNA polymerase III subunit 2 [Cucumis sativus] >KAE8646537.1 hypothetical protein Csa_015785 [Cucumis sativus])

HSP 1 Score: 1784.6 bits (4621), Expect = 0.0e+00
Identity = 898/1038 (86.51%), Postives = 921/1038 (88.73%), Query Frame = 0

Query: 3    IRYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 62
            + YAAPILVDIEYIEE+HAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP
Sbjct: 121  LTYAAPILVDIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 180

Query: 63   LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 122
            LDPGGYF+IKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
Sbjct: 181  LDPGGYFIIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 240

Query: 123  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE----------- 182
            +YLQLNIFTTPKIPIMVVLKAMGMESIQE+VQMVGRDPRYGALLLPSIE           
Sbjct: 241  IYLQLNIFTTPKIPIMVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQE 300

Query: 183  ----------------------EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 242
                                  EGRALGILRDVF+ANVPV+KNNF PKCIYVAVM+RRMM
Sbjct: 301  QALEYLETKVKKFQFASAPPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMM 360

Query: 243  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 302
            DAIL+KDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD
Sbjct: 361  DAILSKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 420

Query: 303  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 362
            FSQHLNSNII+FGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
Sbjct: 421  FSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 480

Query: 363  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 422
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGL                             
Sbjct: 481  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVE 540

Query: 423  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 482
                                            YFAT MR LRRAGKIGEFVSVFVNEKQH
Sbjct: 541  DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQH 600

Query: 483  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 542
            CVYIASDGGRVCRPLVIADKGVSRIKE+HMKELSDGVRTFDDFLR+GLIEYLDVNEENNA
Sbjct: 601  CVYIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNA 660

Query: 543  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY---------------Q 602
            LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY               Q
Sbjct: 661  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 720

Query: 603  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 662
            L RMDTLLYLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 721  LRRMDTLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 780

Query: 663  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 722
            LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRN+DF GNMQILDDDGLAAPGEIIRPN
Sbjct: 781  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPN 840

Query: 723  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 782
            D+YVNKQSP+ITKGSPLPGIPD+AYRPCRQ FKGSEGEPTVVDRVALSTDKNDCLCIKF+
Sbjct: 841  DIYVNKQSPIITKGSPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFL 900

Query: 783  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 842
            IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERG+CPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 843  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 902
            ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 1020

Query: 903  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 932
            AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

BLAST of MS004299 vs. NCBI nr
Match: XP_023541760.1 (DNA-directed RNA polymerase III subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1780.8 bits (4611), Expect = 0.0e+00
Identity = 897/1038 (86.42%), Postives = 919/1038 (88.54%), Query Frame = 0

Query: 3    IRYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 62
            + YAAPILVDIEYIEE+HAQKAPREKKDVVIGRMPIMLRSRCCVL+GKDEAELARLGECP
Sbjct: 121  LTYAAPILVDIEYIEEHHAQKAPREKKDVVIGRMPIMLRSRCCVLYGKDEAELARLGECP 180

Query: 63   LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 122
            LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
Sbjct: 181  LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 240

Query: 123  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE----------- 182
            +YLQLNIFTTPKIPI+VVLKAMGMESIQE+VQMVGRDPRYGALLLPSIE           
Sbjct: 241  IYLQLNIFTTPKIPIVVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQE 300

Query: 183  ----------------------EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 242
                                  EGRALGILRDVF+ANVPVHKNNF PKCIYV VM+RRMM
Sbjct: 301  QALEYLETKVKRFQFFSAPPEKEGRALGILRDVFLANVPVHKNNFLPKCIYVGVMMRRMM 360

Query: 243  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 302
            DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKT+DKLLGKHSRSSRFD
Sbjct: 361  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTVDKLLGKHSRSSRFD 420

Query: 303  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 362
            FSQHLNSNII+FGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
Sbjct: 421  FSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 480

Query: 363  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 422
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGL                             
Sbjct: 481  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLIYLCYCLGVE 540

Query: 423  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 482
                                            YFAT MR LRRAGKIGEFVSVFVNEKQH
Sbjct: 541  DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQH 600

Query: 483  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 542
            CVYIASDGGRVCRPLVIADKGVSRIKE+HMKELSDGVRTFDDFLREGLIEYLDVNEENNA
Sbjct: 601  CVYIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 660

Query: 543  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY---------------Q 602
            LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY               Q
Sbjct: 661  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 720

Query: 603  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 662
            L RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 721  LKRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 780

Query: 663  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 722
            LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRN+D++GNMQILDDDGLAAPGEIIRPN
Sbjct: 781  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDYSGNMQILDDDGLAAPGEIIRPN 840

Query: 723  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 782
            DVYVNKQ+PMITKG+PLPGIPDSAYRPC+Q FKGSEGEPTV+DRVALSTDKNDCLCIKF+
Sbjct: 841  DVYVNKQTPMITKGTPLPGIPDSAYRPCKQIFKGSEGEPTVIDRVALSTDKNDCLCIKFL 900

Query: 783  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 842
            IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERG+CPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 843  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 902
            ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKD LYSGITGCPLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDILYSGITGCPLQ 1020

Query: 903  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 932
            AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

BLAST of MS004299 vs. ExPASy Swiss-Prot
Match: F4KD38 (DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana OX=3702 GN=NRPC2 PE=2 SV=1)

HSP 1 Score: 1471.1 bits (3807), Expect = 0.0e+00
Identity = 748/1049 (71.31%), Postives = 831/1049 (79.22%), Query Frame = 0

Query: 5    YAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLD 64
            YAAPI V+IEY+  +H  KA   K +V+IGRMPIMLRS  CVLHGKDE ELARLGECPLD
Sbjct: 114  YAAPIFVNIEYVHGSHGNKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLD 173

Query: 65   PGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKMY 124
            PGGYF+IKGTEKV+LIQEQLSKNRIIID+DKKGNINASVTSSTE TKSKTVI+ME EK+Y
Sbjct: 174  PGGYFIIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIY 233

Query: 125  LQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIEE------------ 184
            L L+ F   KIPI++VLKAMGMES QEIVQMVGRDPR+ A LLPSIEE            
Sbjct: 234  LFLHRF-VKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQA 293

Query: 185  --------------------GRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMMDAI 244
                                GRAL ILRD+F+A+VPV  NNFR KC YV VMLRRM++A+
Sbjct: 294  LDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAM 353

Query: 245  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQ 304
            LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTM+SE  K +D +L K  R+SRFDFSQ
Sbjct: 354  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQ 413

Query: 305  HLNSN---IITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 364
             LN +    I+ GLERTLSTGN+D+KRFRMHRKGM+QVL RLSFI +MG +T++SPQFEK
Sbjct: 414  CLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEK 473

Query: 365  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 424
            SRKVSGPR+LQPSQWGMLCPCDTPEGE+CGL                             
Sbjct: 474  SRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVT 533

Query: 425  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 484
                                            YFA ++R+LRRAGKIGEFVSVF NEKQH
Sbjct: 534  DLEVLSAEELHTPDSFLVILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQH 593

Query: 485  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 544
            CVY+ASD GRVCRPLVIADKG+SR+K+HHMKEL DGVRTFDDF+R+GLIEYLDVNEENNA
Sbjct: 594  CVYVASDVGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNA 653

Query: 545  LIALYEGEATPE-----------TTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY----- 604
            LIALYE + T E           TTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY     
Sbjct: 654  LIALYESDGTTELDEGAEAAKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMG 713

Query: 605  ----------QLCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYD 664
                      QL RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS+SGYD
Sbjct: 714  KQAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYD 773

Query: 665  IEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDG 724
            IEDAIVMNKSSLDRGFGRCIV KK  +++QKY+N TADRI+ P R    A  MQILDDDG
Sbjct: 774  IEDAIVMNKSSLDRGFGRCIVMKKIVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDG 833

Query: 725  LAAPGEIIRPNDVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALST 784
            LA PGEIIRPND+Y+NKQ P+ T       + DS YRP R++FKG EGE  VVDRVAL +
Sbjct: 834  LATPGEIIRPNDIYINKQVPVDTVTKFTSALSDSQYRPAREYFKGPEGETQVVDRVALCS 893

Query: 785  DKNDCLCIKFIIRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHG 844
            DK   LCIK+IIR TRRPELGDKFSSRHGQKGVCG I+QQEDFPFSE G+CPDLIMNPHG
Sbjct: 894  DKKGQLCIKYIIRHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHG 953

Query: 845  FPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDF 904
            FPSRMTVGKMIELLG KAGVSCGRFHYGSAFGE SGHADKV+ IS TL+++GFSY+GKD 
Sbjct: 954  FPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDL 1013

Query: 905  LYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVG 932
            LYSGI+G P++AYIFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEG+++NGGLRVG
Sbjct: 1014 LYSGISGEPVEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVG 1073

BLAST of MS004299 vs. ExPASy Swiss-Prot
Match: P59470 (DNA-directed RNA polymerase III subunit RPC2 OS=Mus musculus OX=10090 GN=Polr3b PE=1 SV=2)

HSP 1 Score: 1033.5 bits (2671), Expect = 1.5e-300
Identity = 544/1042 (52.21%), Postives = 693/1042 (66.51%), Query Frame = 0

Query: 5    YAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLD 64
            Y+API VDIEY     +Q+  R    + IGRMPIMLRS  CVL GK  AE A+L ECPLD
Sbjct: 109  YSAPITVDIEY--TRGSQRIIRNA--LPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLD 168

Query: 65   PGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKMY 124
            PGGYF++KG EKV+LIQEQLSKNRII++ D+KG + ASVTSST   KS+T + ++  + Y
Sbjct: 169  PGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFY 228

Query: 125  LQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIEE------------ 184
            L+ N   +  IPI+++ KAMG+ES QEIVQM+G +    A   PS+EE            
Sbjct: 229  LRHNTL-SEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQA 288

Query: 185  -----------------------GRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 244
                                     A  +L    + +VPV + NFR KCIY AVM+RR++
Sbjct: 289  LKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVI 348

Query: 245  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 304
             A    + +DD+DY GNKRLEL+GQL+SLLFEDLFK   SE+KK  D+++ K  R+++FD
Sbjct: 349  LA-QGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFD 408

Query: 305  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 364
              +H+  + IT G+   +STGNW +KRF+M R+G++QVL+RLS+IS +G +TR+S QFEK
Sbjct: 409  VVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEK 468

Query: 365  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLY---------------------------- 424
            +RKVSGPR+LQPSQWGMLCP DTPEGEACGL                             
Sbjct: 469  TRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAGNLGVE 528

Query: 425  ---------------------------------FATAMRKLRRAGKIGEFVSVFVNEKQH 484
                                               +  R +RRAG I EFVS+  N    
Sbjct: 529  DVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVSTFRLMRRAGYINEFVSISTNLTDR 588

Query: 485  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 544
            CVYI+SDGGR+CRP +I  K    +   HM+EL+ G R F+DFL E L+EYLDVNEEN+ 
Sbjct: 589  CVYISSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDC 648

Query: 545  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQLC------------- 604
             IALYE     +TTH+EIEPFT+LGV AGLIPYPHHNQSPRNTYQ               
Sbjct: 649  NIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQ 708

Query: 605  --RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 664
              R+DTL+YLL YPQ+P++ T+TIEL+ ++KL AGQNATVAVMSYSGYDIEDA+V+NK+S
Sbjct: 709  RNRIDTLMYLLAYPQKPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKAS 768

Query: 665  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNM---QILDDDGLAAPGEII 724
            LDRGFGRC+V+K      ++Y N T D+++ P  +      +   +ILD DG+ +PGE +
Sbjct: 769  LDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKV 828

Query: 725  RPNDVYVNKQSPMIT----KGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKND 784
                V VNK  P +T    +GS +P  P   Y+     +KG+    + +++V +S++  D
Sbjct: 829  ENKQVLVNKSMPTVTQIPLEGSNVPQQPQ--YKDVPITYKGA--TDSYIEKVMISSNAED 888

Query: 785  CLCIKFIIRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSR 844
               IK ++RQTRRPE+GDKFSSRHGQKGVCG IV QED PF + G+CPD+IMNPHGFPSR
Sbjct: 889  AFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSR 948

Query: 845  MTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSG 904
            MTVGK+IELL GKAGV  GRFHYG+AFG       KV  + E L++ G++Y GKD++ SG
Sbjct: 949  MTVGKLIELLAGKAGVLDGRFHYGTAFG-----GSKVKDVCEDLVRHGYNYLGKDYVTSG 1008

Query: 905  ITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMER 929
            ITG PL+AYI+ GP+YYQKLKHMVLDKMHAR  GPR +LTRQPTEGR+R+GGLR+GEMER
Sbjct: 1009 ITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMER 1068

BLAST of MS004299 vs. ExPASy Swiss-Prot
Match: Q9NW08 (DNA-directed RNA polymerase III subunit RPC2 OS=Homo sapiens OX=9606 GN=POLR3B PE=1 SV=2)

HSP 1 Score: 1033.1 bits (2670), Expect = 1.9e-300
Identity = 544/1044 (52.11%), Postives = 693/1044 (66.38%), Query Frame = 0

Query: 5    YAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLD 64
            Y+API VDIEY     +Q+  R    + IGRMPIMLRS  CVL GK  AE A+L ECPLD
Sbjct: 109  YSAPITVDIEY--TRGSQRIIRNA--LPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLD 168

Query: 65   PGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKMY 124
            PGGYF++KG EKV+LIQEQLSKNRII++ D+KG + ASVTSST   KS+T + ++  + Y
Sbjct: 169  PGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFY 228

Query: 125  LQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIEE------------ 184
            L+ N   +  IPI+++ KAMG+ES QEIVQM+G +    A   PS+EE            
Sbjct: 229  LRHNTL-SEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQA 288

Query: 185  -----------------------GRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 244
                                     A  +L    + +VPV + NFR KCIY AVM+RR++
Sbjct: 289  LKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVI 348

Query: 245  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 304
             A    + +DD+DY GNKRLEL+GQL+SLLFEDLFK   SE+KK  D+++ K  R+++FD
Sbjct: 349  LA-QGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPK-QRAAQFD 408

Query: 305  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 364
              +H+  + IT G+   +STGNW +KRF+M R+G++QVL+RLS+IS +G +TR+S QFEK
Sbjct: 409  VVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEK 468

Query: 365  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLY---------------------------- 424
            +RKVSGPR+LQPSQWGMLCP DTPEGEACGL                             
Sbjct: 469  TRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVE 528

Query: 425  ---------------------------------FATAMRKLRRAGKIGEFVSVFVNEKQH 484
                                                  R +RRAG I EFVS+  N    
Sbjct: 529  DVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDR 588

Query: 485  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 544
            CVYI+SDGGR+CRP +I  K    +   HM+EL+ G R F+DFL E L+EYLDVNEEN+ 
Sbjct: 589  CVYISSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDC 648

Query: 545  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQLC------------- 604
             IALYE     +TTH+EIEPFT+LGV AGLIPYPHHNQSPRNTYQ               
Sbjct: 649  NIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQ 708

Query: 605  --RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 664
              R+DTL+YLL YPQ+P++ T+TIEL+ ++KL AGQNATVAVMSYSGYDIEDA+V+NK+S
Sbjct: 709  RNRIDTLMYLLAYPQKPMVKTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKAS 768

Query: 665  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNM---QILDDDGLAAPGEII 724
            LDRGFGRC+V+K      ++Y N T D+++ P  +      +   +ILD DG+ +PGE +
Sbjct: 769  LDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKV 828

Query: 725  RPNDVYVNKQSPMIT----KGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKND 784
                V VNK  P +T    +GS +P  P   Y+     +KG+    + +++V +S++  D
Sbjct: 829  ENKQVLVNKSMPTVTQIPLEGSNVPQQPQ--YKDVPITYKGA--TDSYIEKVMISSNAED 888

Query: 785  CLCIKFIIRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSR 844
               IK ++RQTRRPE+GDKFSSRHGQKGVCG IV QED PF + G+CPD+IMNPHGFPSR
Sbjct: 889  AFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSR 948

Query: 845  MTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSG 904
            MTVGK+IELL GKAGV  GRFHYG+AFG       KV  + E L++ G++Y GKD++ SG
Sbjct: 949  MTVGKLIELLAGKAGVLDGRFHYGTAFG-----GSKVKDVCEDLVRHGYNYLGKDYVTSG 1008

Query: 905  ITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMER 931
            ITG PL+AYI+ GP+YYQKLKHMVLDKMHAR  GPR +LTRQPTEGR+R+GGLR+GEMER
Sbjct: 1009 ITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMER 1068

BLAST of MS004299 vs. ExPASy Swiss-Prot
Match: Q10233 (DNA-directed RNA polymerase III subunit RPC2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpc2 PE=2 SV=1)

HSP 1 Score: 1031.9 bits (2667), Expect = 4.3e-300
Identity = 549/1051 (52.24%), Postives = 700/1051 (66.60%), Query Frame = 0

Query: 3    IRYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 62
            + Y A I VDIEY       +    +++V IGRMP+MLRS  CVL GK+E E+A L ECP
Sbjct: 131  LTYGANIYVDIEYTRGKQVVR----RRNVPIGRMPVMLRSNKCVLSGKNEMEMAALNECP 190

Query: 63   LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTD-KKGNINASVTSSTEATKSKTVIKMENE 122
            LDPGGYF++KGTEKV+L+QEQLSKNRII++ + KKG   ASVTSST   KSKT +  +N 
Sbjct: 191  LDPGGYFIVKGTEKVILVQEQLSKNRIIVEAEPKKGLWQASVTSSTHERKSKTYVITKNG 250

Query: 123  KMYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMV-GRDPRYGALLLPSIEE-------- 182
            K+YL+ N      IPI+VVLKAMG++S QEI ++V G +  Y  L  PSIEE        
Sbjct: 251  KLYLKHN-SVADDIPIVVVLKAMGLQSDQEIFELVAGAEASYQDLFAPSIEECAKLNIYT 310

Query: 183  --------------------------GRALGILRDVFIANVPVHKNNFRPKCIYVAVMLR 242
                                        AL +L  V +A++ V    FRPK +Y+ +M R
Sbjct: 311  AQQALEYIGARVKVNRRAGANRLPPHEEALEVLAAVVLAHINVFNLEFRPKAVYIGIMAR 370

Query: 243  RMMDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSS 302
            R++ A+++   +DD+DYVGNKRLEL+GQL++LLFEDLFK   S++K  IDK+L K  R+ 
Sbjct: 371  RVLMAMVDPLQVDDRDYVGNKRLELAGQLLALLFEDLFKKFNSDLKLNIDKVLKKPHRTQ 430

Query: 303  RFDFSQHL--NSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVS 362
             FD    L  +S+ IT G+ R LSTGNW +KRF+M R G++ VL+RLS+IS +G +TR++
Sbjct: 431  EFDAYNQLTVHSDHITQGMVRALSTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRIT 490

Query: 363  PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGL------------------------ 422
             QFEK+RKVSGPR+LQ SQ+GMLC  DTPEGEACGL                        
Sbjct: 491  SQFEKTRKVSGPRSLQASQFGMLCTSDTPEGEACGLVKNLALMTHITTDEEEEPIIKLAY 550

Query: 423  -------------------------------------YFATAMRKLRRAGKIGEFVSVFV 482
                                                  F  + RKLRR+GKI  F+ +F+
Sbjct: 551  AFGIEDIHVISGRELHSHGTYLVYLNGAILGISRYPSLFVASFRKLRRSGKISPFIGIFI 610

Query: 483  NEKQHCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVN 542
            N  Q  V+I++DGGR+CRPL+I   G+ +++  H++ L +G   F+DFL++GL+EY+DVN
Sbjct: 611  NTHQRAVFISTDGGRICRPLIIVQNGLPKVESKHIRLLKEGKWGFEDFLKQGLVEYVDVN 670

Query: 543  EENNALIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY----------- 602
            EEN++LI++YE + TP+TTH+EIEPFTILG VAGLIPYPHHNQSPRNTY           
Sbjct: 671  EENDSLISVYERDITPDTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGA 730

Query: 603  ----QLCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIV 662
                QL R+DTLLYL+VYPQ+P++ T+TIEL+GYDKL AGQNATVA+MSYSGYDIEDA+V
Sbjct: 731  IAYNQLQRIDTLLYLMVYPQQPMVKTKTIELIGYDKLPAGQNATVAIMSYSGYDIEDALV 790

Query: 663  MNKSSLDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRN---DDFAGNMQILDDDGLAA 722
            +NKSS+DRGFGRC VF K+S + +KY N T DRI  P R+    +      +++DDGLA 
Sbjct: 791  LNKSSIDRGFGRCQVFHKHSVIVRKYPNGTHDRIGDPQRDPETGEVVWKHGVVEDDGLAG 850

Query: 723  PGEIIRPNDVYVNKQSP------MITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVA 782
             G  ++P  +YVNKQ+P       IT G       +S Y+     +K    EP  +D+V 
Sbjct: 851  VGCRVQPGQIYVNKQTPTNALDNSITLGH--TQTVESGYKATPMTYKAP--EPGYIDKVM 910

Query: 783  LSTDKNDCLCIKFIIRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMN 842
            L+T  +D   IK ++RQTRRPELGDKFSSRHGQKGVCG IVQQED PF+++G+CPD+IMN
Sbjct: 911  LTTTDSDQTLIKVLMRQTRRPELGDKFSSRHGQKGVCGVIVQQEDMPFNDQGICPDIIMN 970

Query: 843  PHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNG 902
            PHGFPSRMTVGKMIELL GK GV  G   YG+ FG       KV+  S  L++ G++Y+G
Sbjct: 971  PHGFPSRMTVGKMIELLSGKVGVLRGTLEYGTCFG-----GTKVEDASRILVEHGYNYSG 1030

Query: 903  KDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGL 931
            KD L SGITG  L+AYIFMGPIYYQKLKHMV+DKMHAR  GPR +LTRQPTEGR+R+GGL
Sbjct: 1031 KDMLTSGITGETLEAYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGL 1090

BLAST of MS004299 vs. ExPASy Swiss-Prot
Match: P22276 (DNA-directed RNA polymerase III subunit RPC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RET1 PE=1 SV=2)

HSP 1 Score: 1028.9 bits (2659), Expect = 3.7e-299
Identity = 548/1039 (52.74%), Postives = 694/1039 (66.79%), Query Frame = 0

Query: 5    YAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLD 64
            Y+API VDIEY    +        KDV IGRMPIMLRS  C+L+  DE+++A+L ECPLD
Sbjct: 125  YSAPIYVDIEYTRGRNIIM----HKDVEIGRMPIMLRSNKCILYDADESKMAKLNECPLD 184

Query: 65   PGGYFVIKGTEKVVLIQEQLSKNRIIIDTD-KKGNINASVTSSTEATKSKTVIKMENEKM 124
            PGGYF++ GTEKV+L+QEQLSKNRII++ D KKG + ASVTSST   KSKT +  +N K+
Sbjct: 185  PGGYFIVNGTEKVILVQEQLSKNRIIVEADEKKGIVQASVTSSTHERKSKTYVITKNGKI 244

Query: 125  YLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMV-GRDPRYGALLLPSIEEGRALGI---- 184
            YL+ N     +IPI +VLKA G+ S  EI+Q+V G D  Y  +   ++EE   L I    
Sbjct: 245  YLKHNSI-AEEIPIAIVLKACGILSDLEIMQLVCGNDSSYQDIFAVNLEESSKLDIYTQQ 304

Query: 185  ---------------------------LRDVFIANVPVHKNNFRPKCIYVAVMLRRMMDA 244
                                       +    IA++ V   +FR K +Y+A+M RR++ A
Sbjct: 305  QALEYIGAKVKTMRRQKLTILQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMA 364

Query: 245  ILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD-- 304
            + N   +DD+DYVGNKRLEL+GQLISLLFEDLFK   ++ K +IDK+L K +R+  +D  
Sbjct: 365  MYNPKMIDDRDYVGNKRLELAGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDAL 424

Query: 305  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 364
             S +++SN IT GL R +STGNW +KRF+M R G++ VL+RLS+IS +G +TR+S QFEK
Sbjct: 425  LSINVHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEK 484

Query: 365  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLY---------------------------- 424
            SRKVSGPRALQPSQ+GMLC  DTPEGEACGL                             
Sbjct: 485  SRKVSGPRALQPSQFGMLCTADTPEGEACGLVKNLALMTHITTDDEEEPIKKLCYVLGVE 544

Query: 425  -------------------------------FATAMRKLRRAGKIGEFVSVFVNEKQHCV 484
                                           F T  R LRR GK+ EF+S++ N  Q  V
Sbjct: 545  DITLIDSASLHLNYGVYLNGTLIGSIRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAV 604

Query: 485  YIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNALI 544
            +IA+DGGR+CRPL+I   G SR+K+ H+++L DG   FDDFL+ GL+EYLDVNEEN++ I
Sbjct: 605  HIATDGGRICRPLIIVSDGQSRVKDIHLRKLLDGELDFDDFLKLGLVEYLDVNEENDSYI 664

Query: 545  ALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQLC--------------- 604
            ALYE +  P  TH+EIEPFTILG VAGLIPYPHHNQSPRNTYQ                 
Sbjct: 665  ALYEKDIVPSMTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQFK 724

Query: 605  RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 664
            R+DTLLYL+ YPQ+P++ T+TIEL+ YDKL AGQNATVAVMSYSGYDIEDA+V+NKSS+D
Sbjct: 725  RIDTLLYLMTYPQQPMVKTKTIELIDYDKLPAGQNATVAVMSYSGYDIEDALVLNKSSID 784

Query: 665  RGFGRCIVFKKYSSVNQKYENNTADRI--VRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 724
            RGFGRC   +K ++V ++Y N+T D I  +R + N D     Q L  DGL   G  ++  
Sbjct: 785  RGFGRCETRRKTTTVLKRYANHTQDIIGGMRVDENGDPIWQHQSLGPDGLGEVGMKVQSG 844

Query: 725  DVYVNKQSPMITKGSPLPGIPD--SAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIK 784
             +Y+NK  P  +  +P P   +  + YR     ++G   EP+ +D+V +S   ND   IK
Sbjct: 845  QIYINKSVPTNSADAPNPNNVNVQTQYREAPVIYRGP--EPSHIDQVMMSVSDNDQALIK 904

Query: 785  FIIRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGK 844
             ++RQ RRPELGDKFSSRHGQKGVCG IV+QED PF+++G+ PD+IMNPHGFPSRMTVGK
Sbjct: 905  VLLRQNRRPELGDKFSSRHGQKGVCGIIVKQEDMPFNDQGIVPDIIMNPHGFPSRMTVGK 964

Query: 845  MIELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCP 904
            MIEL+ GKAGV  G   YG+ FG       K++ +S+ L+ +GF+Y+GKD LYSGITG  
Sbjct: 965  MIELISGKAGVLNGTLEYGTCFG-----GSKLEDMSKILVDQGFNYSGKDMLYSGITGEC 1024

Query: 905  LQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIA 931
            LQAYIF GPIYYQKLKHMVLDKMHAR  GPR +LTRQPTEGR+R+GGLR+GEMERDC+IA
Sbjct: 1025 LQAYIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIA 1084

BLAST of MS004299 vs. ExPASy TrEMBL
Match: A0A6J1CEJ1 (DNA-directed RNA polymerase subunit beta OS=Momordica charantia OX=3673 GN=LOC111010008 PE=3 SV=1)

HSP 1 Score: 1827.0 bits (4731), Expect = 0.0e+00
Identity = 927/1038 (89.31%), Postives = 928/1038 (89.40%), Query Frame = 0

Query: 3    IRYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 62
            + YAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP
Sbjct: 121  LTYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 180

Query: 63   LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 122
            LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
Sbjct: 181  LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 240

Query: 123  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE----------- 182
            MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE           
Sbjct: 241  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIEECAKEKVYTQE 300

Query: 183  ----------------------EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 242
                                  EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM
Sbjct: 301  QALEYLETKVKKFQFASAPAEKEGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 360

Query: 243  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 302
            DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD
Sbjct: 361  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 420

Query: 303  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 362
            FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
Sbjct: 421  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 480

Query: 363  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 422
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGL                             
Sbjct: 481  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCMGVE 540

Query: 423  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 482
                                            YFATAMRKLRRAGKIGEFVSVFVNEKQH
Sbjct: 541  DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATAMRKLRRAGKIGEFVSVFVNEKQH 600

Query: 483  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 542
            CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA
Sbjct: 601  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 660

Query: 543  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY---------------Q 602
            LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY               Q
Sbjct: 661  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 720

Query: 603  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 662
            LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 721  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 780

Query: 663  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 722
            LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN
Sbjct: 781  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 840

Query: 723  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 782
            DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI
Sbjct: 841  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 900

Query: 783  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 842
            IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 960

Query: 843  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 902
            ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 1020

Query: 903  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 932
            AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

BLAST of MS004299 vs. ExPASy TrEMBL
Match: A0A6J1G1X8 (DNA-directed RNA polymerase subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111449942 PE=3 SV=1)

HSP 1 Score: 1780.8 bits (4611), Expect = 0.0e+00
Identity = 897/1038 (86.42%), Postives = 919/1038 (88.54%), Query Frame = 0

Query: 3    IRYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 62
            + YAAPILVDIEYIEE+HAQKAPREKKDVVIGRMPIMLRSRCCVL+GKDEAELARLGECP
Sbjct: 121  LTYAAPILVDIEYIEEHHAQKAPREKKDVVIGRMPIMLRSRCCVLYGKDEAELARLGECP 180

Query: 63   LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 122
            LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
Sbjct: 181  LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 240

Query: 123  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE----------- 182
            +YLQLNIFTTPKIPI+VVLKAMGMESIQE+VQMVGRDPRYGALLLPSIE           
Sbjct: 241  IYLQLNIFTTPKIPIVVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQE 300

Query: 183  ----------------------EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 242
                                  EGRALGILRDVF+ANVPVHKNNF PKCIYV VM+RRMM
Sbjct: 301  QALEYLETKVKKFQFFSAPPEKEGRALGILRDVFLANVPVHKNNFLPKCIYVGVMMRRMM 360

Query: 243  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 302
            DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKT+DKLLGKHSRSSRFD
Sbjct: 361  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTVDKLLGKHSRSSRFD 420

Query: 303  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 362
            FSQHLNSNII+FGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
Sbjct: 421  FSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 480

Query: 363  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 422
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGL                             
Sbjct: 481  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVE 540

Query: 423  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 482
                                            YFAT MR LRRAGKIGEFVSVFVNEKQH
Sbjct: 541  DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQH 600

Query: 483  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 542
            CVYIASDGGRVCRPLVIADKGVSRIKE+HMKELSDGVRTFDDFLREGLIEYLDVNEENNA
Sbjct: 601  CVYIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 660

Query: 543  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY---------------Q 602
            LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY               Q
Sbjct: 661  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 720

Query: 603  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 662
            L RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 721  LKRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 780

Query: 663  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 722
            LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRN+D++GNMQILDDDGLAAPGEIIRPN
Sbjct: 781  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDYSGNMQILDDDGLAAPGEIIRPN 840

Query: 723  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 782
            DVYVNKQ+PMITKG+PLPGIPDSAYRPC+Q FKGSEGEPTV+DRVALSTDKNDCLCIKF+
Sbjct: 841  DVYVNKQTPMITKGTPLPGIPDSAYRPCKQIFKGSEGEPTVIDRVALSTDKNDCLCIKFL 900

Query: 783  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 842
            IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERG+CPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 843  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 902
            ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKD LYSGITGCPLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDILYSGITGCPLQ 1020

Query: 903  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 932
            AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

BLAST of MS004299 vs. ExPASy TrEMBL
Match: A0A1S3CIH7 (DNA-directed RNA polymerase subunit beta OS=Cucumis melo OX=3656 GN=LOC103500795 PE=3 SV=1)

HSP 1 Score: 1780.8 bits (4611), Expect = 0.0e+00
Identity = 896/1038 (86.32%), Postives = 920/1038 (88.63%), Query Frame = 0

Query: 3    IRYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 62
            + YAAPILVDIEYIEE+HAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP
Sbjct: 121  LTYAAPILVDIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 180

Query: 63   LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 122
            LDPGGYF+IKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
Sbjct: 181  LDPGGYFIIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 240

Query: 123  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE----------- 182
            +YLQLNIFTTPKIPIMVVLKAMGMES+QE+VQMVGRDPRYGALLLPSIE           
Sbjct: 241  IYLQLNIFTTPKIPIMVVLKAMGMESVQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQE 300

Query: 183  ----------------------EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 242
                                  EGRALGILRDVF+ANVPV+KNNF PKCIYVAVM+RRMM
Sbjct: 301  QALEYLETKVKKFQFASAPPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMM 360

Query: 243  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 302
            DAIL+KDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD
Sbjct: 361  DAILSKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 420

Query: 303  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 362
            FSQHLNSNII+FGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
Sbjct: 421  FSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 480

Query: 363  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 422
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGL                             
Sbjct: 481  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVE 540

Query: 423  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 482
                                            YFAT MR LRRAGKIGEFVSVFVNEKQH
Sbjct: 541  DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQH 600

Query: 483  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 542
            CVYIASDGGRVCRPLVIADKGVSRI+E+HMKELSDGVRTFDDFLR+GLIEYLDVNEENNA
Sbjct: 601  CVYIASDGGRVCRPLVIADKGVSRIREYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNA 660

Query: 543  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY---------------Q 602
            LIALYEGEATPETTHIEIEP TILGVVAGLIPYPHHNQSPRNTY               Q
Sbjct: 661  LIALYEGEATPETTHIEIEPLTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 720

Query: 603  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 662
            L RMDTLLYLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 721  LRRMDTLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 780

Query: 663  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 722
            LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRN+DF GNMQILDDDGLAAPGEIIRPN
Sbjct: 781  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPN 840

Query: 723  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 782
            DVYVNKQSP+ITKGSPLPGIPDSAYRPCRQ FKGSEGEPTVVDRVALSTDKNDCLCIKF+
Sbjct: 841  DVYVNKQSPIITKGSPLPGIPDSAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFL 900

Query: 783  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 842
            IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERG+CPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 843  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 902
            ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLI+RGFSYNGKDFLYSGITGCPLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIERGFSYNGKDFLYSGITGCPLQ 1020

Query: 903  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 932
            AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

BLAST of MS004299 vs. ExPASy TrEMBL
Match: A0A1S4E3N4 (DNA-directed RNA polymerase subunit beta OS=Cucumis melo OX=3656 GN=LOC103500795 PE=3 SV=1)

HSP 1 Score: 1780.4 bits (4610), Expect = 0.0e+00
Identity = 896/1036 (86.49%), Postives = 919/1036 (88.71%), Query Frame = 0

Query: 5    YAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLD 64
            YAAPILVDIEYIEE+HAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLD
Sbjct: 3    YAAPILVDIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLD 62

Query: 65   PGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKMY 124
            PGGYF+IKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK+Y
Sbjct: 63   PGGYFIIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIY 122

Query: 125  LQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE------------- 184
            LQLNIFTTPKIPIMVVLKAMGMES+QE+VQMVGRDPRYGALLLPSIE             
Sbjct: 123  LQLNIFTTPKIPIMVVLKAMGMESVQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQA 182

Query: 185  --------------------EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMMDA 244
                                EGRALGILRDVF+ANVPV+KNNF PKCIYVAVM+RRMMDA
Sbjct: 183  LEYLETKVKKFQFASAPPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDA 242

Query: 245  ILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFS 304
            IL+KDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFS
Sbjct: 243  ILSKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFS 302

Query: 305  QHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSR 364
            QHLNSNII+FGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSR
Sbjct: 303  QHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSR 362

Query: 365  KVSGPRALQPSQWGMLCPCDTPEGEACGL------------------------------- 424
            KVSGPRALQPSQWGMLCPCDTPEGEACGL                               
Sbjct: 363  KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDL 422

Query: 425  ------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQHCV 484
                                          YFAT MR LRRAGKIGEFVSVFVNEKQHCV
Sbjct: 423  ELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCV 482

Query: 485  YIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNALI 544
            YIASDGGRVCRPLVIADKGVSRI+E+HMKELSDGVRTFDDFLR+GLIEYLDVNEENNALI
Sbjct: 483  YIASDGGRVCRPLVIADKGVSRIREYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALI 542

Query: 545  ALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY---------------QLC 604
            ALYEGEATPETTHIEIEP TILGVVAGLIPYPHHNQSPRNTY               QL 
Sbjct: 543  ALYEGEATPETTHIEIEPLTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLR 602

Query: 605  RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 664
            RMDTLLYLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD
Sbjct: 603  RMDTLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 662

Query: 665  RGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPNDV 724
            RGFGRCIVFKKYSSVNQKYENNTADRIVRPNRN+DF GNMQILDDDGLAAPGEIIRPNDV
Sbjct: 663  RGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDV 722

Query: 725  YVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFIIR 784
            YVNKQSP+ITKGSPLPGIPDSAYRPCRQ FKGSEGEPTVVDRVALSTDKNDCLCIKF+IR
Sbjct: 723  YVNKQSPIITKGSPLPGIPDSAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIR 782

Query: 785  QTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMIEL 844
            QTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERG+CPDLIMNPHGFPSRMTVGKMIEL
Sbjct: 783  QTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIEL 842

Query: 845  LGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAY 904
            LGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLI+RGFSYNGKDFLYSGITGCPLQAY
Sbjct: 843  LGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIERGFSYNGKDFLYSGITGCPLQAY 902

Query: 905  IFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGAS 932
            IFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGAS
Sbjct: 903  IFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGAS 962

BLAST of MS004299 vs. ExPASy TrEMBL
Match: A0A6J1HQP0 (DNA-directed RNA polymerase subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111466504 PE=3 SV=1)

HSP 1 Score: 1775.8 bits (4598), Expect = 0.0e+00
Identity = 895/1038 (86.22%), Postives = 917/1038 (88.34%), Query Frame = 0

Query: 3    IRYAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP 62
            + YAAPILVDIEYIEE+HAQKAPREKKDV IGRMPIMLRSRCCVL+GKDEAELARLGECP
Sbjct: 121  LTYAAPILVDIEYIEEHHAQKAPREKKDVAIGRMPIMLRSRCCVLYGKDEAELARLGECP 180

Query: 63   LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 122
            LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
Sbjct: 181  LDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK 240

Query: 123  MYLQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIE----------- 182
            +YLQLNIFTTPKIPI+VVLKAMGMESIQE+VQMVGRDPRYGALLLPSIE           
Sbjct: 241  IYLQLNIFTTPKIPIVVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQE 300

Query: 183  ----------------------EGRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMM 242
                                  EGRALGILRDVF+ANVPVHKNNF PKCIYV VM+RRMM
Sbjct: 301  QALEYLETKVKKFQFFSAPPEKEGRALGILRDVFLANVPVHKNNFFPKCIYVGVMMRRMM 360

Query: 243  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD 302
            DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKT+DKLLGKHSRSSRFD
Sbjct: 361  DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTVDKLLGKHSRSSRFD 420

Query: 303  FSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 362
            FSQHLNSNII+FGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
Sbjct: 421  FSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 480

Query: 363  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 422
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGL                             
Sbjct: 481  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVE 540

Query: 423  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 482
                                            YFAT MR LRRAGKIGEFVSVFVNEKQH
Sbjct: 541  DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQH 600

Query: 483  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 542
            CVYIASDGGRVCRPLVIADKGVSRIKE+HMKELSDGVRTFDDFLREGLIEYLDVNEENNA
Sbjct: 601  CVYIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 660

Query: 543  LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY---------------Q 602
            LIALYEGEAT ETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY               Q
Sbjct: 661  LIALYEGEATLETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 720

Query: 603  LCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 662
            L RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 721  LKRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 780

Query: 663  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 722
            LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRN+D++GNMQILDDDGLAAPGEIIRPN
Sbjct: 781  LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDYSGNMQILDDDGLAAPGEIIRPN 840

Query: 723  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 782
            DVYVNKQ+PMITKG+PLPGIPDSAYRPCRQ FKGSEGEPTV+DRVALSTDKNDCLCIKF+
Sbjct: 841  DVYVNKQTPMITKGTPLPGIPDSAYRPCRQIFKGSEGEPTVIDRVALSTDKNDCLCIKFL 900

Query: 783  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 842
            IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERG+CPDLIMNPHGFPSRMTVGKMI
Sbjct: 901  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 843  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ 902
            ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETL+KRGFSYNGKD LYSGITGCPLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLVKRGFSYNGKDILYSGITGCPLQ 1020

Query: 903  AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 932
            AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

BLAST of MS004299 vs. TAIR 10
Match: AT5G45140.1 (nuclear RNA polymerase C2 )

HSP 1 Score: 1471.1 bits (3807), Expect = 0.0e+00
Identity = 748/1049 (71.31%), Postives = 831/1049 (79.22%), Query Frame = 0

Query: 5    YAAPILVDIEYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLD 64
            YAAPI V+IEY+  +H  KA   K +V+IGRMPIMLRS  CVLHGKDE ELARLGECPLD
Sbjct: 114  YAAPIFVNIEYVHGSHGNKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLD 173

Query: 65   PGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKMY 124
            PGGYF+IKGTEKV+LIQEQLSKNRIIID+DKKGNINASVTSSTE TKSKTVI+ME EK+Y
Sbjct: 174  PGGYFIIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIY 233

Query: 125  LQLNIFTTPKIPIMVVLKAMGMESIQEIVQMVGRDPRYGALLLPSIEE------------ 184
            L L+ F   KIPI++VLKAMGMES QEIVQMVGRDPR+ A LLPSIEE            
Sbjct: 234  LFLHRF-VKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQA 293

Query: 185  --------------------GRALGILRDVFIANVPVHKNNFRPKCIYVAVMLRRMMDAI 244
                                GRAL ILRD+F+A+VPV  NNFR KC YV VMLRRM++A+
Sbjct: 294  LDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAM 353

Query: 245  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQ 304
            LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTM+SE  K +D +L K  R+SRFDFSQ
Sbjct: 354  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQ 413

Query: 305  HLNSN---IITFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK 364
             LN +    I+ GLERTLSTGN+D+KRFRMHRKGM+QVL RLSFI +MG +T++SPQFEK
Sbjct: 414  CLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEK 473

Query: 365  SRKVSGPRALQPSQWGMLCPCDTPEGEACGL----------------------------- 424
            SRKVSGPR+LQPSQWGMLCPCDTPEGE+CGL                             
Sbjct: 474  SRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVT 533

Query: 425  --------------------------------YFATAMRKLRRAGKIGEFVSVFVNEKQH 484
                                            YFA ++R+LRRAGKIGEFVSVF NEKQH
Sbjct: 534  DLEVLSAEELHTPDSFLVILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQH 593

Query: 485  CVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNA 544
            CVY+ASD GRVCRPLVIADKG+SR+K+HHMKEL DGVRTFDDF+R+GLIEYLDVNEENNA
Sbjct: 594  CVYVASDVGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNA 653

Query: 545  LIALYEGEATPE-----------TTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY----- 604
            LIALYE + T E           TTHIEIEPFTILGVVAGLIPYPHHNQSPRNTY     
Sbjct: 654  LIALYESDGTTELDEGAEAAKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMG 713

Query: 605  ----------QLCRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYD 664
                      QL RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS+SGYD
Sbjct: 714  KQAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYD 773

Query: 665  IEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNDDFAGNMQILDDDG 724
            IEDAIVMNKSSLDRGFGRCIV KK  +++QKY+N TADRI+ P R    A  MQILDDDG
Sbjct: 774  IEDAIVMNKSSLDRGFGRCIVMKKIVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDG 833

Query: 725  LAAPGEIIRPNDVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALST 784
            LA PGEIIRPND+Y+NKQ P+ T       + DS YRP R++FKG EGE  VVDRVAL +
Sbjct: 834  LATPGEIIRPNDIYINKQVPVDTVTKFTSALSDSQYRPAREYFKGPEGETQVVDRVALCS 893

Query: 785  DKNDCLCIKFIIRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHG 844
            DK   LCIK+IIR TRRPELGDKFSSRHGQKGVCG I+QQEDFPFSE G+CPDLIMNPHG
Sbjct: 894  DKKGQLCIKYIIRHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHG 953

Query: 845  FPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDF 904
            FPSRMTVGKMIELLG KAGVSCGRFHYGSAFGE SGHADKV+ IS TL+++GFSY+GKD 
Sbjct: 954  FPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDL 1013

Query: 905  LYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVG 932
            LYSGI+G P++AYIFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEG+++NGGLRVG
Sbjct: 1014 LYSGISGEPVEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVG 1073

BLAST of MS004299 vs. TAIR 10
Match: AT4G21710.1 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 616.7 bits (1589), Expect = 3.1e-176
Identity = 379/1068 (35.49%), Postives = 554/1068 (51.87%), Query Frame = 0

Query: 3    IRYAAPILVDI--EYIEENHAQKAPREKKD---VVIGRMPIMLRSRCCVLHGKDEAELAR 62
            + Y+AP+ VD+    I++ H  +   E +D   V IG++PIMLRS  C L    E +L  
Sbjct: 120  LTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTE 179

Query: 63   LGECPLDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINA------SVTSSTEATK 122
            LGECP D GGYF+I G+EKV++ QE++S N + +   ++ N  A      S+  +     
Sbjct: 180  LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPP 239

Query: 123  SKTVIKM--------ENEKMYLQLNI-FTTPKIPIMVVLKAMGMESIQEIVQMV---GRD 182
            S   ++M         +   Y++  + +   +IPI++V +A+G  + ++I++ +     D
Sbjct: 240  STMFVRMLARASAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFAD 299

Query: 183  PRYGALLLPSIEE-----------------GRALG------------ILRDVFIANVPVH 242
             +   LL PS+EE                 G  +G            IL+   + +V + 
Sbjct: 300  TQMMELLRPSLEEAFVIQNQLVALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGIG 359

Query: 243  KNNFRPKCIYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSE 302
            ++    K  Y   ++ R++   L +   DD+D+ GNKRL+L+G L+  LF  LF+ +  +
Sbjct: 360  EHCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD 419

Query: 303  VKKTIDKLLGKHSRSSRFDFSQHLNSNIITFGLERTLSTGNWDVKRFRMHRKGMSQVLAR 362
            V+  + K +  + +     F+  + +  IT GL+ +L+TGNW        R G+SQVL R
Sbjct: 420  VRSYVQKCV-DNGKEVNLQFA--IKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR 479

Query: 363  LSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGL---------- 422
            L++ ST+ H+ R++    +  K++ PR L  SQWGM+CP +TPEG+ACGL          
Sbjct: 480  LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYI 539

Query: 423  -------------------------------------------------YFATAMRKLRR 482
                                                                  +R+LRR
Sbjct: 540  TVGSAAYPILEFLEEWGTENFEEISPSVIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRR 599

Query: 483  AGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDD- 542
               +   V V  + +   + I +D GR  RPL I D     IK+  +  L       +D 
Sbjct: 600  RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDNQKLLIKKRDIYALQQRESAEEDG 659

Query: 543  ---FLREGLIEYLDVNEENNALIA-----LYEGEATPET------THIEIEPFTILGVVA 602
                + +G IEY+D  EE   +I+     L +    PE       TH EI P  ILGV A
Sbjct: 660  WHHLVAKGFIEYIDTEEEETTMISMTISDLVQARLRPEEAYTENYTHCEIHPSLILGVCA 719

Query: 603  GLIPYPHHNQSPRNTYQLC---------------RMDTLLYLLVYPQRPLLTTRTIELVG 662
             +IP+P HNQSPRNTYQ                 RMDTL Y+L YPQ+PL+TTR +E + 
Sbjct: 720  SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLH 779

Query: 663  YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNTADR 722
            + +L AG NA VA+  YSGY+ ED+++MN+SS+DRGF R + F+ Y    +K      + 
Sbjct: 780  FRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKED 839

Query: 723  IVRPNRNDDFA---GNMQILDDDGLAAPGEIIRPNDVYVNKQSPMITKGSPLPGIPDSAY 782
              RP+R        G+   LDDDGLA PG  +   DV + K +P+    +       S Y
Sbjct: 840  FGRPDRGSTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQ---GQSSRY 899

Query: 783  RPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFIIRQTRRPELGDKFSSRHGQKGVCGT 842
                        E  +VD+V L+T+ +    +K  +R  R P++GDKFSSRHGQKG  G 
Sbjct: 900  TRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGM 959

Query: 843  IVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG 902
               QED P++  GV PD+I+NPH  PSRMT+G++IE + GK     G+    + F + + 
Sbjct: 960  TYTQEDMPWTIEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVT- 1019

Query: 903  HADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG 927
                VD IS+ L K G+   G + +Y+G TG PL A IF+GP YYQ+LKHMV DK+H+RG
Sbjct: 1020 ----VDNISKALHKCGYQMRGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRG 1079

BLAST of MS004299 vs. TAIR 10
Match: AT3G23780.1 (nuclear RNA polymerase D2A )

HSP 1 Score: 402.1 bits (1032), Expect = 1.2e-111
Identity = 298/1042 (28.60%), Postives = 488/1042 (46.83%), Query Frame = 0

Query: 17   EENHAQK--APREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFVIKGT 76
            ++N+ +K     +K+D++IG +P+M++S  C    K + E  + G+C  D GGYFVIKG 
Sbjct: 155  QDNYVEKKILDVKKQDILIGSIPVMVKSILCKTSEKGK-ENCKKGDCAFDQGGYFVIKGA 214

Query: 77   EKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKM-ENEKM-------YLQ 136
            EKV + QEQ+   R+ I      N   +V+  +E  +++ ++++ ENEK         + 
Sbjct: 215  EKVFIAQEQMCTKRLWI-----SNSPWTVSFRSENKRNRFIVRLSENEKAEDYKRREKVL 274

Query: 137  LNIFTTPKIPIMVVLKAMGMESIQEIVQMV---GRDPRYGALLLPSIEEGRAL------- 196
               F + +IP+ ++  A+G+ S +E + ++   G D      L+ SI    A+       
Sbjct: 275  TVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHVADAVCEAFRCG 334

Query: 197  -----GILRDVFIANVPVHKN--------------NFRPKCIYVAVMLRRMMDAILNKDA 256
                  + + +     P  ++              + + K  ++  M++ ++++   K  
Sbjct: 335  NNALTYVEQQIKSTKFPPAESVDECLHLYLFPGLQSLKKKARFLGYMVKCLLNSYAGKRK 394

Query: 257  MDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKH--SRSSRFDFSQHLN 316
             +++D   NKR+EL+G+L+    E   +  ++  ++ + + + KH            +L+
Sbjct: 395  CENRDSFRNKRIELAGELL----EREIRVHLAHARRKMTRAMQKHLSGDGDLKPIEHYLD 454

Query: 317  SNIITFGLERTLSTGNWDVKRFRMHR-KGMSQVLARLSFISTMGHVTRVSPQFEKSRKVS 376
            +++IT GL R  STG W     +M R  G+   L R + + T+  + R   Q   + KV 
Sbjct: 455  ASVITNGLSRAFSTGAWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVLYTGKVG 514

Query: 377  GPRALQPSQWGMLCPCDTPEGEACGL---------------------YFATAMRKL---- 436
              R   PS WG +C   TP+GE CGL                      FA  M +L    
Sbjct: 515  DARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVSTQSLESVVEKLFACGMEELMDDT 574

Query: 437  ---------------------------------RRAGKIGEFVSVFVNEKQHCVYIASDG 496
                                             RR  ++   + +  ++  + V I +D 
Sbjct: 575  CTPLFGKHKVLLNGDWVGLCADSESFVAELKSRRRQSELPREMEIKRDKDDNEVRIFTDA 634

Query: 497  GRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNALIALYEGE 556
            GR+ RPL++ +  + ++K+    +       FD  L  G++E + + EE +   A    +
Sbjct: 635  GRLLRPLLVVE-NLQKLKQEKPSQY-----PFDHLLDHGILELIGIEEEEDCNTAWGIKQ 694

Query: 557  ATPET---THIEIEPFTILGVVAGLIPYPHHNQSPRNTYQL----------------CRM 616
               E    TH E++   +LGV   ++P+ +H+   R  YQ                  R 
Sbjct: 695  LLKEPKIYTHCELDLSFLLGVSCAVVPFANHDHGRRVLYQSQKHCQQAIGFSSTNPNIRC 754

Query: 617  DTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG 676
            DTL   L YPQ+PL  T   E +  + L  GQNA VAV  + GY+ ED+IVMNK+SL+RG
Sbjct: 755  DTLSQQLFYPQKPLFKTLASECLKKEVLFNGQNAIVAVNVHLGYNQEDSIVMNKASLERG 814

Query: 677  FGRCIVFKKYSS---VNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPND 736
              R    + Y +        +    D +V+  +     G +  L+DDG    G  +   D
Sbjct: 815  MFRSEQIRSYKAEVDAKDSEKRKKMDELVQFGKTHSKIGKVDSLEDDGFPFIGANMSTGD 874

Query: 737  VYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFII 796
            + + + +      S                 K    E  +V +V LS++          +
Sbjct: 875  IVIGRCTESGADHS----------------IKLKHTERGIVQKVVLSSNDEGKNFAAVSL 934

Query: 797  RQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMIE 856
            RQ R P LGDKFSS HGQKGV G + +Q++FPF+ +G+ PD+++NPH FPSR T G+++E
Sbjct: 935  RQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQGIVPDIVINPHAFPSRQTPGQLLE 994

Query: 857  LLGGKAGVSCGRFHYGS--AFGEPSGHADK-----VDAISETLIKRGFSYNGKDFLYSGI 916
                K G++C     GS  A+ + + HA       V  I+E L + GFS  G + +Y+G 
Sbjct: 995  AALSK-GIACPIQKEGSSAAYTKLTRHATPFSTPGVTEITEQLHRAGFSRWGNERVYNGR 1054

Query: 917  TGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERD 923
            +G  +++ IFMGP +YQ+L HM  DK+  R +GP   LTRQP   R R GG++ GEMERD
Sbjct: 1055 SGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERD 1114

BLAST of MS004299 vs. TAIR 10
Match: AT3G23780.2 (nuclear RNA polymerase D2A )

HSP 1 Score: 402.1 bits (1032), Expect = 1.2e-111
Identity = 298/1042 (28.60%), Postives = 488/1042 (46.83%), Query Frame = 0

Query: 17   EENHAQK--APREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFVIKGT 76
            ++N+ +K     +K+D++IG +P+M++S  C    K + E  + G+C  D GGYFVIKG 
Sbjct: 155  QDNYVEKKILDVKKQDILIGSIPVMVKSILCKTSEKGK-ENCKKGDCAFDQGGYFVIKGA 214

Query: 77   EKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKM-ENEKM-------YLQ 136
            EKV + QEQ+   R+ I      N   +V+  +E  +++ ++++ ENEK         + 
Sbjct: 215  EKVFIAQEQMCTKRLWI-----SNSPWTVSFRSENKRNRFIVRLSENEKAEDYKRREKVL 274

Query: 137  LNIFTTPKIPIMVVLKAMGMESIQEIVQMV---GRDPRYGALLLPSIEEGRAL------- 196
               F + +IP+ ++  A+G+ S +E + ++   G D      L+ SI    A+       
Sbjct: 275  TVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHVADAVCEAFRCG 334

Query: 197  -----GILRDVFIANVPVHKN--------------NFRPKCIYVAVMLRRMMDAILNKDA 256
                  + + +     P  ++              + + K  ++  M++ ++++   K  
Sbjct: 335  NNALTYVEQQIKSTKFPPAESVDECLHLYLFPGLQSLKKKARFLGYMVKCLLNSYAGKRK 394

Query: 257  MDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKH--SRSSRFDFSQHLN 316
             +++D   NKR+EL+G+L+    E   +  ++  ++ + + + KH            +L+
Sbjct: 395  CENRDSFRNKRIELAGELL----EREIRVHLAHARRKMTRAMQKHLSGDGDLKPIEHYLD 454

Query: 317  SNIITFGLERTLSTGNWDVKRFRMHR-KGMSQVLARLSFISTMGHVTRVSPQFEKSRKVS 376
            +++IT GL R  STG W     +M R  G+   L R + + T+  + R   Q   + KV 
Sbjct: 455  ASVITNGLSRAFSTGAWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVLYTGKVG 514

Query: 377  GPRALQPSQWGMLCPCDTPEGEACGL---------------------YFATAMRKL---- 436
              R   PS WG +C   TP+GE CGL                      FA  M +L    
Sbjct: 515  DARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVSTQSLESVVEKLFACGMEELMDDT 574

Query: 437  ---------------------------------RRAGKIGEFVSVFVNEKQHCVYIASDG 496
                                             RR  ++   + +  ++  + V I +D 
Sbjct: 575  CTPLFGKHKVLLNGDWVGLCADSESFVAELKSRRRQSELPREMEIKRDKDDNEVRIFTDA 634

Query: 497  GRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNALIALYEGE 556
            GR+ RPL++ +  + ++K+    +       FD  L  G++E + + EE +   A    +
Sbjct: 635  GRLLRPLLVVE-NLQKLKQEKPSQY-----PFDHLLDHGILELIGIEEEEDCNTAWGIKQ 694

Query: 557  ATPET---THIEIEPFTILGVVAGLIPYPHHNQSPRNTYQL----------------CRM 616
               E    TH E++   +LGV   ++P+ +H+   R  YQ                  R 
Sbjct: 695  LLKEPKIYTHCELDLSFLLGVSCAVVPFANHDHGRRVLYQSQKHCQQAIGFSSTNPNIRC 754

Query: 617  DTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG 676
            DTL   L YPQ+PL  T   E +  + L  GQNA VAV  + GY+ ED+IVMNK+SL+RG
Sbjct: 755  DTLSQQLFYPQKPLFKTLASECLKKEVLFNGQNAIVAVNVHLGYNQEDSIVMNKASLERG 814

Query: 677  FGRCIVFKKYSS---VNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPND 736
              R    + Y +        +    D +V+  +     G +  L+DDG    G  +   D
Sbjct: 815  MFRSEQIRSYKAEVDAKDSEKRKKMDELVQFGKTHSKIGKVDSLEDDGFPFIGANMSTGD 874

Query: 737  VYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFII 796
            + + + +      S                 K    E  +V +V LS++          +
Sbjct: 875  IVIGRCTESGADHS----------------IKLKHTERGIVQKVVLSSNDEGKNFAAVSL 934

Query: 797  RQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMIE 856
            RQ R P LGDKFSS HGQKGV G + +Q++FPF+ +G+ PD+++NPH FPSR T G+++E
Sbjct: 935  RQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQGIVPDIVINPHAFPSRQTPGQLLE 994

Query: 857  LLGGKAGVSCGRFHYGS--AFGEPSGHADK-----VDAISETLIKRGFSYNGKDFLYSGI 916
                K G++C     GS  A+ + + HA       V  I+E L + GFS  G + +Y+G 
Sbjct: 995  AALSK-GIACPIQKEGSSAAYTKLTRHATPFSTPGVTEITEQLHRAGFSRWGNERVYNGR 1054

Query: 917  TGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERD 923
            +G  +++ IFMGP +YQ+L HM  DK+  R +GP   LTRQP   R R GG++ GEMERD
Sbjct: 1055 SGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERD 1114

BLAST of MS004299 vs. TAIR 10
Match: AT3G18090.1 (nuclear RNA polymerase D2B )

HSP 1 Score: 397.9 bits (1021), Expect = 2.2e-110
Identity = 297/1044 (28.45%), Postives = 482/1044 (46.17%), Query Frame = 0

Query: 14   EYIEENHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFVIKG 73
            EY+E+   +    +K+D++IG +P+M++S  C    K + E  + G C  D GGYFVIKG
Sbjct: 39   EYVEK---EILDVKKQDILIGSIPVMVKSVLCKTSEKGK-ENCKKGNCAFDQGGYFVIKG 98

Query: 74   TEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKM-ENEK------MYLQ 133
             EKV + QEQ+   R+ I      N   +V+  +E  +++ ++++ ENEK      M   
Sbjct: 99   AEKVFIAQEQMCTKRLWI-----SNSPWTVSFRSETKRNRFIVRLSENEKAEDYKIMEKV 158

Query: 134  LNI-FTTPKIPIMVVLKAMGMESIQEIVQMV---GRDPRYGALLLPSIEEGRAL------ 193
            L + F + +IP+ ++  A+G+ S +E + ++   G D      L+ SI E  A+      
Sbjct: 159  LTVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHEADAVCEAFRC 218

Query: 194  ------GILRDVFIANVPVHKN--------------NFRPKCIYVAVMLRRMMDAILNKD 253
                   +   +     P  ++                + K  ++  M++ ++ A   K 
Sbjct: 219  GNNALTYVEHQIKSTKFPPAESVDDCLRLYLFPCLQGLKKKARFLGYMVKCLLSAYAGKR 278

Query: 254  AMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKH--SRSSRFDFSQHL 313
              +++D   NKR+EL+G+L+    E   +  ++  ++ + + + K             +L
Sbjct: 279  KCENRDSFRNKRIELAGELL----EREIRVHLAHARRKMTRAMQKQLSGDGDLKPIEHYL 338

Query: 314  NSNIITFGLERTLSTGNWDVKRFRMHR-KGMSQVLARLSFISTMGHVTRVSPQFEKSRKV 373
            ++++IT GL R  STG W     +M R  G+   L R + + T+  + R   Q   + KV
Sbjct: 339  DASVITNGLNRAFSTGAWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVLYTGKV 398

Query: 374  SGPRALQPSQWGMLCPCDTPEGEACGLY-------------------------------- 433
               R   PS WG +C   TP+GE CGL                                 
Sbjct: 399  GDARHPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVSTQGLESVVEMLFTCGMEELMND 458

Query: 434  --------------------------FATAMRKLRRAGKIGEFVSVFVNEKQHCVYIASD 493
                                      F   ++  RR  ++   + +  ++  + V I +D
Sbjct: 459  TSTPLCGKHKVLLNGDWVGLCADSESFVGELKSRRRQSELPLEMEIKRDKDDNEVRIFTD 518

Query: 494  GGRVCRPLVIADKGVSRIKEHHMKELSDGVRTFDDFLREGLIEYLDVNEENNALIALYEG 553
             GR+ RPL++ +        H +K+       F   L +G++E + + EE +   A    
Sbjct: 519  AGRLLRPLLVVE------NLHKLKQDKPTQYPFKHLLDQGILELIGIEEEEDCTTAWGIK 578

Query: 554  EATPET---THIEIEPFTILGVVAGLIPYPHHNQSPRNTYQL----------------CR 613
            +   E    TH E++   +LGV   ++P+ +H+   R  YQ                  R
Sbjct: 579  QLLKEPKNYTHCELDLSFLLGVSCAIVPFANHDHGKRVLYQSQKHCQQAIGFSSTNPNIR 638

Query: 614  MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 673
             DTL   L YPQ+PL  T   E +  + L  GQNA VAV  + GY+ ED+IVMNK+SL+R
Sbjct: 639  CDTLSQQLFYPQKPLFKTLASECLEKEVLFNGQNAIVAVNVHLGYNQEDSIVMNKASLER 698

Query: 674  GFGRCIVFKKYSS---VNQKYENNTADRIVRPNRNDDFAGNMQILDDDGLAAPGEIIRPN 733
            G  R    + Y +        +    D +V+  +     G +  L+DDG    G  +   
Sbjct: 699  GMFRSEQIRSYKAEVDTKDSEKRKKMDELVQFGKTYSKIGKVDSLEDDGFPFIGANMSTG 758

Query: 734  DVYVNKQSPMITKGSPLPGIPDSAYRPCRQFFKGSEGEPTVVDRVALSTDKNDCLCIKFI 793
            D+ + + +      S                 K    E  +V +V LS++          
Sbjct: 759  DIVIGRCTESGADHS----------------IKLKHTERGIVQKVVLSSNDEGKNFAAVS 818

Query: 794  IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGVCPDLIMNPHGFPSRMTVGKMI 853
            +RQ R P LGDKFSS HGQKGV G + +Q++FPF+ +G+ PD+++NPH FPSR T G+++
Sbjct: 819  LRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQGIVPDIVINPHAFPSRQTPGQLL 878

Query: 854  ELLGGKAGVSC---GRFHYGSAFGEPSGHADK-----VDAISETLIKRGFSYNGKDFLYS 913
            E    K G++C    +    +A+ + + HA       V  I+E L + GFS  G + +Y+
Sbjct: 879  EAALSK-GIACPIQKKEGSSAAYTKLTRHATPFSTPGVTEITEQLHRAGFSRWGNERVYN 938

Query: 914  GITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEME 923
            G +G  +++ IFMGP +YQ+L HM  +K+  R +GP   LTRQP   R R GG+R GEME
Sbjct: 939  GRSGEMMRSLIFMGPTFYQRLVHMSENKVKFRNTGPVHPLTRQPVADRKRFGGIRFGEME 998