MS004252 (gene) Bitter gourd (TR) v1

Overview


Name	MS004252
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Yae1_N domain-containing protein
Location	scaffold92: 1189530 .. 1192188 (+)
RNA-Seq Expression	MS004252
Synteny	MS004252

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTACTCTTGCTGAAGAACTTTATTCCGAGAGTCTGCAGTCAACAAATTCAAAATTGGGTGCTACATTGTCTTCTGATTGGGGACAAAATCGGTCATCAGGTATTCATGATTTTTTTTAATGACGCATTCAAGCATATTTTTAAACTTTTGACATGCTGGGAGCTTGGGAGTGGAACATAATGATTGACGATAGATAGTTACATGTTTGAGAAGTTTAATTATAGGAGAATGACTGATCATCTATTGGATATTTTAAACACAACTTATCTGAAGCTCTACGAATTTTTCCTATTTTAGCATGGTGTATTAATTGGTATATTCAGCTCTAGAATCCATCATGAAAAAATATCTCCGTTTGTGCCAAATCATTTATTTTTGTATTTCATTTGACTGAAATATTCTCTTCTTTGGTGCATTATTGTCACCAAAACAGAATATTTATGCTTAATTATGCATTTAATGTTACATTGTTATGCATTCTATTTTCTGTCAAAAATGCACATTGCATATGATCTTGGTTCTAGAAAAAAACGCCTTGCTTTCCTTGAGTGCCCTTTTCTTGTTTCTCAAGTACACCTTTGTAGCTTGTGCCTAAAAAACGAGGCTATAACTAGAACCAAAATTTGTAGGATTATATGATTTACTGTCTGGTTTTAGGTTCTGGTGTGGATGACTTGTGCCAAGATGATGGATCTTTATGGGGTGGTTCTGATGAAGGCTCGGAGGAAATATCTGATTTGGACAGGGAGTGGCAGAGGAGACATGACCAATTCCATACGGTAACAGCCTTATGTTGACTATTTTATTTTATCTTTTTCTTTAATTGATTTCATATATGTAGGATTGAAATGGTTTTCGTGCTCCTTTTACCCTTTAACAACATTTAGATTGGATACCGTGATGGTTTAATCGCTGGTAAAGAAGCTGCAGCTCAAGAGGGATTTAATGTTGGCTTCAAGCAGTCAGTCTTTATTGGGTATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGGTAATGAGAGAATGAATTCTCTAACCATTTTACGAATGCATTAATACATATATTTCTCTTTCAAAGTCTGTGTCGGCAAGAATTTCCTTACAAAAAGAACTCTTGGTTCTTGGAATTTAACAGTTATACTATAATGTTCTTATGCTCTAAAAAATTTAGTCCCGACAACACAATGGTGTGACATTCTGAATTGTTAAGAGAAAGCTGGTCAGGTGTAGCGTGCAAAGAGGTCTAGGATAGTATTTTTAAGACCACATGCTGTCTCTCTCTTCTTGCGCATCTTGCAAAGGTCTCTGGACCCGACTGAAATCAGCCTCATAGGTTGTGCAATTGTGTCGAGTTGAGAAGCTACATTGCCTTCTTATCTCTTTCTTAATTCTCTCTCCCTCCCTCTCTCTCTCTTTTAATAAGAAACAAAACTATGTTCAGGAGAAAAAAACCAACTACAAAACAACCTAGAACCGGGGTGGCCCAAAGAACTGCAAAAGAAGAGCCTCCCTATCACTATTAATCATTAGAAGACTATAGTTAGTTTGAACAATACCAAGAGAGGACGAATACTGCACACTATTACAAAAAGAATCAAAAGAAGATATTTTAACTTCCAAAGATGCCGTGGAAGACCCTTAGCCACAGCTCCACAGGACCTTAGACTTGCTCTTAAATCACCAACTCTGCTTCCATAAATCAATCATCTACTCGTCTAGGGCAACATAAAGAAAAACCGAGCTCTTTCAAAATAAAAGACGATCCCCTGGATGCCAAATGGCACTGAAGGAAAAGGTAGTCCAAAGATTCACCGTCCTTGAGGCATAGACAGTAAACTGTAGGGGATAAGCCCAATTCGGGAATTTTCTTGCAGCATCTCTCGAGTATTTATAGGCTTTCTATAGGCTAAAGACCACTGAAACATGTTTAACATTTTTTGGAATTCTTAAGTTTGAACCCGAACAAGCTCCACGGAAACATCTTGATTCTCTCTTTTCAGCTTTCCAGTCTAAGCCCACATGGATCTCTTCAGTGAGGATAGATATGTTGCACTGAAATTATACAATATAACTAGAAGTTGAAGCATAATTTAGGCACGATTTCAAATGCGAATACTAAATAAAATAGTTTGTTAAAGCCCGGAGAAATAAATTTGCACATCACCCCATTGGCCATTCGTCTATTGTTAAAGCCTGGAGGATAGATATGGGGTTTCCTCTACCGAGCCCTTAAGTTGTTCCTTTTGTCTTTCTTTTGGAATGTACAAGTTTCTTATCTAAAAAAAAAAAATCGTCTATTGTTCTTGTTACTGCGTTGTACTTAATATTTTTGTTTTCTTCTTCTGTAGTGTGCTTGCTCGCCTTCCTGATGACTTGAAAGAGAAGCTAATGGGAAATGAAGAGAACAGTAGTAAATTCCAAAGCTTGTATGAATGTACGAACTCTCTTTCGACAGCAGATGCGCTTAGACTATTCAATGACGAGATTTTGGCACAAGGCACGACAGAAGAGTGTGTCGACGCAGATACTAATTCCCGAACGATAGGTTTGCTGAAGCAAAATCCAGATTATGGACGTCTAGGGAAGTTCTATGGAGAGCTTCAAGCACTTTTACCAAAATCACCTGCTCTGAAAGTTCATCTACATGAAGACCAG

mRNA sequence

ATGGAGGGTACTCTTGCTGAAGAACTTTATTCCGAGAGTCTGCAGTCAACAAATTCAAAATTGGGTGCTACATTGTCTTCTGATTGGGGACAAAATCGGTCATCAGGTTCTGGTGTGGATGACTTGTGCCAAGATGATGGATCTTTATGGGGTGGTTCTGATGAAGGCTCGGAGGAAATATCTGATTTGGACAGGGAGTGGCAGAGGAGACATGACCAATTCCATACGATTGGATACCGTGATGGTTTAATCGCTGGTAAAGAAGCTGCAGCTCAAGAGGGATTTAATGTTGGCTTCAAGCAGTCAGTCTTTATTGGGTATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGTGTGCTTGCTCGCCTTCCTGATGACTTGAAAGAGAAGCTAATGGGAAATGAAGAGAACAGTAGTAAATTCCAAAGCTTGTATGAATGTACGAACTCTCTTTCGACAGCAGATGCGCTTAGACTATTCAATGACGAGATTTTGGCACAAGGCACGACAGAAGAGTGTGTCGACGCAGATACTAATTCCCGAACGATAGGTTTGCTGAAGCAAAATCCAGATTATGGACGTCTAGGGAAGTTCTATGGAGAGCTTCAAGCACTTTTACCAAAATCACCTGCTCTGAAAGTTCATCTACATGAAGACCAG

Coding sequence (CDS)

ATGGAGGGTACTCTTGCTGAAGAACTTTATTCCGAGAGTCTGCAGTCAACAAATTCAAAATTGGGTGCTACATTGTCTTCTGATTGGGGACAAAATCGGTCATCAGGTTCTGGTGTGGATGACTTGTGCCAAGATGATGGATCTTTATGGGGTGGTTCTGATGAAGGCTCGGAGGAAATATCTGATTTGGACAGGGAGTGGCAGAGGAGACATGACCAATTCCATACGATTGGATACCGTGATGGTTTAATCGCTGGTAAAGAAGCTGCAGCTCAAGAGGGATTTAATGTTGGCTTCAAGCAGTCAGTCTTTATTGGGTATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGTGTGCTTGCTCGCCTTCCTGATGACTTGAAAGAGAAGCTAATGGGAAATGAAGAGAACAGTAGTAAATTCCAAAGCTTGTATGAATGTACGAACTCTCTTTCGACAGCAGATGCGCTTAGACTATTCAATGACGAGATTTTGGCACAAGGCACGACAGAAGAGTGTGTCGACGCAGATACTAATTCCCGAACGATAGGTTTGCTGAAGCAAAATCCAGATTATGGACGTCTAGGGAAGTTCTATGGAGAGCTTCAAGCACTTTTACCAAAATCACCTGCTCTGAAAGTTCATCTACATGAAGACCAG

Protein sequence

MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLARLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSRTIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ

Homology

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BLAST of MS004252 vs. NCBI nr
Match: XP_022138890.1 (uncharacterized protein LOC111009960 [Momordica charantia])

HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114
Identity = 213/219 (97.26%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEI 60
           MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEG EEI
Sbjct: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGLEEI 60

Query: 61  SDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120
           SDLDREWQRRHDQFHTIGYRDGLI+GKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120

Query: 121 RLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSR 180
            LPDDLKEKLMGNEENSSKFQSLYECTNS+STADALRLFNDEILAQ TTEECVDADTNSR
Sbjct: 121 CLPDDLKEKLMGNEENSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSR 180

Query: 181 TIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ 220
           TIGLLKQNPD GRLGKFYGELQALLPKSPALKVHLHEDQ
Sbjct: 181 TIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ 219

[Close]

BLAST of MS004252 vs. NCBI nr
Match: XP_022957528.1 (uncharacterized protein LOC111458903 [Cucurbita moschata] >XP_022957529.1 uncharacterized protein LOC111458903 [Cucurbita moschata] >XP_022957530.1 uncharacterized protein LOC111458903 [Cucurbita moschata])

HSP 1 Score: 345.9 bits (886), Expect = 2.6e-91
Identity = 178/219 (81.28%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEI 60
           MEGT+AEELYSESLQST SKL     SD+ QNR SGS V+D C+DDGSLWGGSDE  EE 
Sbjct: 1   MEGTIAEELYSESLQSTKSKLADISLSDYRQNRPSGSAVNDSCEDDGSLWGGSDECLEET 60

Query: 61  SDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120
           SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 120

Query: 121 RLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSR 180
            LPDDLKEKL+G EE  SKFQSLYE  NSLSTADALRLF+D+I+AQ T EECVDA+T+S+
Sbjct: 121 SLPDDLKEKLVGIEEYRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEECVDANTSSQ 180

Query: 181 TIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ 220
           TI LLKQN DYGRLG+FYGELQALLPKSPAL +HLHE+Q
Sbjct: 181 TIDLLKQNSDYGRLGQFYGELQALLPKSPALNLHLHEEQ 219

[Close]

BLAST of MS004252 vs. NCBI nr
Match: KAG6601147.1 (Crossover junction endonuclease MUS81, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 344.4 bits (882), Expect = 7.4e-91
Identity = 177/219 (80.82%), Postives = 192/219 (87.67%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEI 60
           MEGT+AEELYSE LQST SKL     SD+ QNRSSGS V+D C+DDGSLWGGSDEG EE 
Sbjct: 478 MEGTIAEELYSEGLQSTKSKLADISLSDYRQNRSSGSAVNDSCEDDGSLWGGSDEGLEET 537

Query: 61  SDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120
           SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA
Sbjct: 538 SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 597

Query: 121 RLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSR 180
            LPDDLKEKL+G EEN SKFQSLYE  NSLSTADALRLF+D+I+AQ T EECVDA+T+S+
Sbjct: 598 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQCTKEECVDANTSSQ 657

Query: 181 TIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ 220
           TI LLKQN D  RLG+FYGELQALLP SPAL +HLHE+Q
Sbjct: 658 TIDLLKQNSDNSRLGQFYGELQALLPTSPALNLHLHEEQ 696

[Close]

BLAST of MS004252 vs. NCBI nr
Match: KAG7031946.1 (hypothetical protein SDJN02_05988 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344.4 bits (882), Expect = 7.4e-91
Identity = 177/219 (80.82%), Postives = 192/219 (87.67%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEI 60
           MEGT+AEELYSE LQST SKL     SD+ QNRSSGS V+D C+DDGSLWGGSDEG EE 
Sbjct: 1   MEGTIAEELYSEGLQSTKSKLADISLSDYRQNRSSGSAVNDSCEDDGSLWGGSDEGLEET 60

Query: 61  SDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120
           SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 120

Query: 121 RLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSR 180
            LPDDLKEKL+G EEN SKFQSLYE  NSLSTADALRLF+D+I+AQ T EECVDA+T+S+
Sbjct: 121 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQCTKEECVDANTSSQ 180

Query: 181 TIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ 220
           TI LLKQN D  RLG+FYGELQALLP SPAL +HLHE+Q
Sbjct: 181 TIDLLKQNSDNSRLGQFYGELQALLPTSPALNLHLHEEQ 219

[Close]

BLAST of MS004252 vs. NCBI nr
Match: XP_023514291.1 (uncharacterized protein LOC111778596 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023514300.1 uncharacterized protein LOC111778596 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.0 bits (881), Expect = 9.7e-91
Identity = 177/219 (80.82%), Postives = 192/219 (87.67%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEI 60
           MEGT+AEELYSESLQST SKL     SD+ QNR SGS V+D C+DDGSLWGGSDEG EE 
Sbjct: 1   MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 60

Query: 61  SDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120
           SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 120

Query: 121 RLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSR 180
            LPDDLKEKL+G EEN SKFQSLYE  NSLSTADALRLF+++I+AQ T EECVDA+T+S+
Sbjct: 121 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHNDIMAQHTKEECVDANTSSQ 180

Query: 181 TIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ 220
           TI LLKQN D  RLGKFYGELQALLP SPAL +HLHE+Q
Sbjct: 181 TIDLLKQNSDNSRLGKFYGELQALLPTSPALNLHLHEEQ 219

[Close]

BLAST of MS004252 vs. ExPASy Swiss-Prot
Match: Q9NRH1 (Protein YAE1 homolog OS=Homo sapiens OX=9606 GN=YAE1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.5e-05
Identity = 29/78 (37.18%), Postives = 38/78 (48.72%), Query Frame = 0


Query: 42  LCQDDGSLWGGSDEGSEEISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQ 101
           L Q  G      DE ++E     REWQ    +    GYRDG+ AGK    Q+GFN G+K+
Sbjct: 9   LIQGPGDKGDVFDEEADESLLAQREWQSNMQRRVKEGYRDGIDAGKAVTLQQGFNQGYKK 68

Query: 102 SVFIGYKLGLVRGVSSVL 120
              +    G +RG  S L
Sbjct: 69  GAEVILNYGRLRGTLSAL 86

[Close]

BLAST of MS004252 vs. ExPASy TrEMBL
Match: A0A6J1CAS2 (uncharacterized protein LOC111009960 OS=Momordica charantia OX=3673 GN=LOC111009960 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114
Identity = 213/219 (97.26%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEI 60
           MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEG EEI
Sbjct: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGLEEI 60

Query: 61  SDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120
           SDLDREWQRRHDQFHTIGYRDGLI+GKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWQRRHDQFHTIGYRDGLISGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120

Query: 121 RLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSR 180
            LPDDLKEKLMGNEENSSKFQSLYECTNS+STADALRLFNDEILAQ TTEECVDADTNSR
Sbjct: 121 CLPDDLKEKLMGNEENSSKFQSLYECTNSISTADALRLFNDEILAQDTTEECVDADTNSR 180

Query: 181 TIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ 220
           TIGLLKQNPD GRLGKFYGELQALLPKSPALKVHLHEDQ
Sbjct: 181 TIGLLKQNPDDGRLGKFYGELQALLPKSPALKVHLHEDQ 219

[Close]

BLAST of MS004252 vs. ExPASy TrEMBL
Match: A0A6J1H273 (uncharacterized protein LOC111458903 OS=Cucurbita moschata OX=3662 GN=LOC111458903 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91
Identity = 178/219 (81.28%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEI 60
           MEGT+AEELYSESLQST SKL     SD+ QNR SGS V+D C+DDGSLWGGSDE  EE 
Sbjct: 1   MEGTIAEELYSESLQSTKSKLADISLSDYRQNRPSGSAVNDSCEDDGSLWGGSDECLEET 60

Query: 61  SDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120
           SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 120

Query: 121 RLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSR 180
            LPDDLKEKL+G EE  SKFQSLYE  NSLSTADALRLF+D+I+AQ T EECVDA+T+S+
Sbjct: 121 SLPDDLKEKLVGIEEYRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEECVDANTSSQ 180

Query: 181 TIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ 220
           TI LLKQN DYGRLG+FYGELQALLPKSPAL +HLHE+Q
Sbjct: 181 TIDLLKQNSDYGRLGQFYGELQALLPKSPALNLHLHEEQ 219

[Close]

BLAST of MS004252 vs. ExPASy TrEMBL
Match: A0A6J1JRH1 (uncharacterized protein LOC111487537 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487537 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 8.0e-91
Identity = 177/219 (80.82%), Postives = 192/219 (87.67%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEI 60
           MEGT+AEELYSESLQST SKL     SD+ QNR SGS V+D C+DDGSLWGGSDEG EE 
Sbjct: 1   MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 60

Query: 61  SDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120
           SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA
Sbjct: 61  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 120

Query: 121 RLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSR 180
            LPDDLKEKL+G EEN SKFQSLYE  NSLSTADALRLF+D+I+AQ T EE VDA+T+S+
Sbjct: 121 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ 180

Query: 181 TIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ 220
           TI LLKQN DY RLG+FYGELQALLP SPAL +HLHE+Q
Sbjct: 181 TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 219

[Close]

BLAST of MS004252 vs. ExPASy TrEMBL
Match: A0A6J1JR95 (uncharacterized protein LOC111487537 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487537 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 8.0e-91
Identity = 177/219 (80.82%), Postives = 192/219 (87.67%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEI 60
           MEGT+AEELYSESLQST SKL     SD+ QNR SGS V+D C+DDGSLWGGSDEG EE 
Sbjct: 8   MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 67

Query: 61  SDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120
           SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA
Sbjct: 68  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 127

Query: 121 RLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSR 180
            LPDDLKEKL+G EEN SKFQSLYE  NSLSTADALRLF+D+I+AQ T EE VDA+T+S+
Sbjct: 128 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ 187

Query: 181 TIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ 220
           TI LLKQN DY RLG+FYGELQALLP SPAL +HLHE+Q
Sbjct: 188 TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 226

[Close]

BLAST of MS004252 vs. ExPASy TrEMBL
Match: A0A6J1JSZ3 (uncharacterized protein LOC111487537 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487537 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 8.0e-91
Identity = 177/219 (80.82%), Postives = 192/219 (87.67%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEI 60
           MEGT+AEELYSESLQST SKL     SD+ QNR SGS V+D C+DDGSLWGGSDEG EE 
Sbjct: 17  MEGTIAEELYSESLQSTKSKLADMSLSDYRQNRPSGSAVNDSCEDDGSLWGGSDEGLEET 76

Query: 61  SDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLA 120
           SDLDREW RRHDQFHTIGYRDGLIAGKEAA+QEGFNVGFKQSV IGYKLGLVRGVSSVLA
Sbjct: 77  SDLDREWHRRHDQFHTIGYRDGLIAGKEAASQEGFNVGFKQSVSIGYKLGLVRGVSSVLA 136

Query: 121 RLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSR 180
            LPDDLKEKL+G EEN SKFQSLYE  NSLSTADALRLF+D+I+AQ T EE VDA+T+S+
Sbjct: 137 SLPDDLKEKLVGIEENRSKFQSLYESVNSLSTADALRLFHDDIMAQHTKEEGVDANTSSQ 196

Query: 181 TIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHEDQ 220
           TI LLKQN DY RLG+FYGELQALLP SPAL +HLHE+Q
Sbjct: 197 TIDLLKQNSDYSRLGQFYGELQALLPTSPALNLHLHEEQ 235

[Close]

BLAST of MS004252 vs. TAIR 10
Match: AT1G34570.1 (Essential protein Yae1, N-terminal )

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-30
Identity = 83/209 (39.71%), Postives = 120/209 (57.42%), Query Frame = 0


Query: 6   AEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGSEEISDLDR 65
           A+ELY ESLQ   SKL            +   G+++L   D   +G SDE   E   LD 
Sbjct: 12  AKELYGESLQI--SKLS-----------NKDHGLENL---DDPFYGSSDEDYSEARVLDN 71

Query: 66  EWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVLARLPDD 125
           E ++R  +FH+ GYRDG++ GKEA AQEG+N G+K+SV  GYK G+VRGVSS LA LP +
Sbjct: 72  ENEQRRVKFHSAGYRDGIVVGKEAIAQEGYNFGYKESVLAGYKFGIVRGVSSALAFLPVE 131

Query: 126 LKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDADTNSRTI-GL 185
            +EKL+  +E   KFQ L+   ++LST  A++ F + +  +   E+  +   +S ++ G 
Sbjct: 132 FREKLIDEQETREKFQKLHSSVHALSTEVAMKQFYETLTTKQGEEKSGEEGPDSCSVSGS 191

Query: 186 LKQNPDYGRLGKFYGELQALLPKSPALKV 214
                    LG +  EL +LL KSP ++V
Sbjct: 192 CSGVNVTADLGSYVTELSSLLDKSPTIEV 204

[Close]

BLAST of MS004252 vs. TAIR 10
Match: AT3G15750.1 (Essential protein Yae1, N-terminal )

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-29
Identity = 83/218 (38.07%), Postives = 121/218 (55.50%), Query Frame = 0


Query: 1   MEGTLAEELYSESLQSTNSKLGATLSSDWGQNRSSGSGVDDLCQDDGSLWGGSDEGS-EE 60
           ++  LA+ELY ES+Q                          L + D   +G SDE    E
Sbjct: 7   VKDNLAKELYGESVQ--------------------------LSKHDDPFYGSSDEEDYSE 66

Query: 61  ISDLDREWQRRHDQFHTIGYRDGLIAGKEAAAQEGFNVGFKQSVFIGYKLGLVRGVSSVL 120
              L  E ++R  +FH+ GYRDG++AGKEA AQEG+N G+K+SV  GY+ GLVRGVSS L
Sbjct: 67  ARVLGNENKQRRVKFHSAGYRDGIVAGKEAIAQEGYNFGYKESVLNGYQFGLVRGVSSAL 126

Query: 121 ARLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILA----QGTTEECVDA 180
           A LPD+L+EKL+  +E   KFQ L+   ++LST  A++ F + +      + + EE  D+
Sbjct: 127 AFLPDELREKLIDKQETREKFQKLHSSVHALSTEVAMKRFYETLTTKQGEEKSGEEGPDS 186

Query: 181 DTNSRTIGLLKQNPDYGRLGKFYGELQALLPKSPALKV 214
            ++S +   +    D   LG +  EL +LL KSP ++V
Sbjct: 187 CSDSGSGSGVNVTTD---LGSYVTELSSLLDKSPTIEV 195

[Close]

BLAST of MS004252 vs. TAIR 10
Match: AT1G34550.1 (Protein of unknown function (DUF616) )

HSP 1 Score: 48.9 bits (115), Expect = 6.0e-06
Identity = 34/102 (33.33%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 117 SVLARLPDDLKEKLMGNEENSSKFQSLYECTNSLSTADALRLFNDEILAQGTTEECVDAD 176
           +VLA LPD+L+EKL+  +E   KFQ L+   ++LST  A++ F   +    TT+E +   
Sbjct: 3   NVLAFLPDELREKLIDEQETREKFQRLHSYVHALSTEVAMKRFYGAL----TTKEGISGS 62

Query: 177 TNSRTIGLLKQNPDYGRLGKFYGELQALLPKSPALKVHLHED 219
             + T             G +  EL +LL KSP ++  L +D
Sbjct: 63  GVNAT----------SDWGSYVTELSSLLEKSPKIERVLIDD 90

The following BLAST results are available for this feature:

BLAST of MS004252 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138890.1	4.8e-114	97.26	uncharacterized protein LOC111009960 [Momordica charantia]	[more]
XP_022957528.1	2.6e-91	81.28	uncharacterized protein LOC111458903 [Cucurbita moschata] >XP_022957529.1 unchar...	[more]
KAG6601147.1	7.4e-91	80.82	Crossover junction endonuclease MUS81, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7031946.1	7.4e-91	80.82	hypothetical protein SDJN02_05988 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023514291.1	9.7e-91	80.82	uncharacterized protein LOC111778596 isoform X2 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of MS004252 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NRH1	8.5e-05	37.18	Protein YAE1 homolog OS=Homo sapiens OX=9606 GN=YAE1 PE=1 SV=1	[more]

BLAST of MS004252 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAS2	2.3e-114	97.26	uncharacterized protein LOC111009960 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1H273	1.2e-91	81.28	uncharacterized protein LOC111458903 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]
A0A6J1JRH1	8.0e-91	80.82	uncharacterized protein LOC111487537 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JR95	8.0e-91	80.82	uncharacterized protein LOC111487537 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JSZ3	8.0e-91	80.82	uncharacterized protein LOC111487537 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS004252 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34570.1	2.1e-30	39.71	Essential protein Yae1, N-terminal	[more]
AT3G15750.1	1.7e-29	38.07	Essential protein Yae1, N-terminal	[more]
AT1G34550.1	6.0e-06	33.33	Protein of unknown function (DUF616)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019191	Essential protein Yae1, N-terminal	PFAM	PF09811	Yae1_N	coord: 78..115 e-value: 1.4E-9 score: 37.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..41
IPR038881	Yae1-like	PANTHER	PTHR18829	PROTEIN YAE1 HOMOLOG	coord: 40..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004252.1	MS004252.1	mRNA