MS004227 (gene) Bitter gourd (TR) v1

Overview


Name	MS004227
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	mRNA-decapping enzyme subunit 2-like
Location	scaffold92: 982721 .. 987038 (+)
RNA-Seq Expression	MS004227
Synteny	MS004227

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGCCTCCATCAGCCCTCAACTGCTCCGGTGAAGAACGGTCTCCCTCCCCAAGAACTCCTCGACGATCTTTGCAGGTCTTCTCCGCACTCTCTCTCTATTCGATTTACTGGTTTTGCTACAAGTTCTGTGTTCGTTAGGTGTGGAGATCTTAGGGTTTTTAAGTGGAAATTGCTATGAGCTTGTTTATTTTCATTATCTTTCACATTTTTTTTTCATTTATTGCTTCCGCCGACTGAATGTCGTATTTAGCTTTTTGCAAAACGAAGCACGATGGTAAACATAGCGCCATGAACGGGCCAATAAGAATTATTCTAAAAGTCGCTTGGTTTTGTCGTTGAACGTACTTTGCCGACATATCTTCATTAAAATGAGTGAATTGTCAGTTTAGTTAGTTGGCAACTGTTCTTATTGATTATGAAAAATATATTGTAGTAAATGGGGATTCAGTTAGATATTTTTATTGGTTTAAGATGCTATATTAGTTTAGTTTGTCAGTTCTGATGGCCTTAATATGAGGGTGAGCATTTATTTTCTTTTGCCAAAACAAACGAGATACTAAATCACAAACCACTTAGAGAGACAATTAGGAAGATGGATATCTGACATAAACTTAATAATTTCCTTTTTACTAGTGTTTGTATTATTGAAATATGATATATAAGATATTGGTCGAAATGGATAGATAGAATGCAAAAAGAATTTCCTCCATGCAACCGAAACAGCATCAGCCATTTTGGAGGAAAGAATTGTTTTGAGTATTTTCTTAAGATTTATGAGCATTTTTCTTTTGGATTATTTTGCCTATTGCAATGTTATAGCTCCAACATTCTCATCTATCTATCACTTTTTCTCGATATGCAGCCGATTTGTGTTAAATGTGCCAAAGGAAGATCTACAATCATTCGAGAGGATTCTGTTTCTAGTTGAATATGCACATTGGTTCTATGAAGACAACTCAGTAGAAAATAATCCTTCACTGAAGTCATTTAATTTGAAGGAGTTCACTTCGTTATGTATCCTTGGCAATGGCATTATATGATCCGTTGTCCTTATAATGTGTTTGGATGTTTTAAAATTTCCATTTCTATGTTTAATAAATGAAAATTCCTTCTTCCTTTTGAATAAGTATATTATGTTTCTATTGTAAAATAAAACAACAAAGTCGTGAGTTTGCAATTTAGTATGAGGTTTACTCACTAGCAATTAAAAAAAGCCTAGTATCATAAGTTGTTAAGTTTACATATGATAAAGGGTAAATTACACACGAAAAGTGACTCTCATTCAATATTTTATGAAGATATATATACATTACGGTCATTCTTCATTATCAACTACCAAACTGAACAACTTGATATTACTAATGTCAGTCATTGTTGATACATCTTGAGATGCCAACTCATGGATGATACAGTCCGAGTCAGGTCGAATCACCCAATTTTTTGGTTTTCTTTGTGACATATCTCATACTCATCTTTTGAGACGGTTATGGCTTGGTTGAGTCTGAGTATCCATGACTTCCACAGCCCTGGGGACCTTTGTCACGTTATTATTTTCTTTTATATATACATGATATAGTTTTGTAAATTTTTTAAATTAATTAAGCTTCTTGTGGTGAAGTTTAAATATTTTTACTACATGCAAAGGCGGATGTCTTAATTTAAAAATTAAGATGATGCCAAGGTATAACCATAATCTAATTCTATACTGTTTTTTCTGGATATACTTGTATTCCTTAATTTTCTGCAGTATTTAACAGCTGTGATGTTTTGAAACCATATGTGCCCCACATAGATGACATATTTAAGGACTTCACTTCCTATAAGCTTCGAGTTCCTGTCACCGGGGCCATTATTTTAGATGAAACCTTTGAGAGGGTGAGTGTTGATTTGCAGATTTCTTTTATTAATACTGTTATTGATTTATTTGTATTAATTGATTGAATTATTTTGTTTTGTACACTTCCCATGTTCGTGCTTCCTTTTCTGCAACCAAACAGTGCTTACTAGTAAAGGGATGGAAAGGGTCAAGCTGGAGTTTTCCTCGTGGCAAAAAGAGCAAGGATGAAGAAGATCATGCTTGTGCCATTAGAGAAGTAATATTTCTCTTTCTTTTTGGGACTCTCATGACGCTACTTAAAAATTCTTTTCAGTGCCCCTTTTTTTTATTATTATTAATGAAAATGCCTGCTTTATTTGAGAAAAATGATATACTATAAAAAGAAAAAAAGAAAAGGAAAGTCCAAGACAACAAAAGCTTGAAAAAAAAAGGCTAGCTAATACAAAATTATTACAGCAAAGGGCTCTAGTTGATAAAGAGTGAGAGAAAAAGGAAAAATATTAAAAGATTTAGTTAAAGAAACTCAAAGGGAAGCATTGAACCCAGCCCTTCACCCATGATTCTTTGCACCTCTAAAAATTCTCCTATTTCTCTTGAGCCAAATGTTCCAAGAACGCAATGAAAACAGCCCACCAACAAGCTGCTTTGCTATCATGGAAAGAAGGATGAAATAACGCCTCGATACCTCCTAGGCCCTTAGTGGTAATGGAACCTCCAATGACATAAAGCTTCCGTTGATTAAAGTTTTGTGGACTTGAACCAGTTATTTGCCATCTGGTATGATTTGTGCTAAGCAAAAAGGAGTATTGAAGAGGTTTAATTGTTTCAGGGTTTTAGCTTAAATTACTGAATTGCTTATATTTGTACCAAAACAATTCTTTACTTCGCCACTTGTCCATGGGATTTATTTTTCATTGAGAATGCAGGTTTTGGAGGAAACTGGTTTTGACGTGTCAGCATTCCTTATCAAAGAGGATTTTATTGAATTGATGTTTGGACAACAAAGAGTGCGGCTCTACATTATCGCTGGGGTGAAAAACGATTCTTCCTTTGCGCCACTTACTAAGAAAGAGATCAGTGTATGTTTGCCTTCTCAATTTTTGTCTTCTTCAACTTAGAAATTCTTGAACAAAGATTTTGGATTTTCCTTTTCAATAATGGACAGATGGAAGACTTTAGGTTGATCCTTTTTATATTTAACATGCTATTGGGTTCAAAGCTATTTTGGTTCTGTTTTCTAGCTTTCGATCTTTATTTACAACGTTTATACTGAGCATTGACAATTTGGTAATTGGTATACCTTTCAACATCTGAGTTCAAGTTATCAGTACTTCCTATCTTCTAAGTGCCTCTATTGATTGTTTCATTCATGTTTGTTCCTCTTAAGGCCGAATTCTTAGAAAAATATATCATTCTATAATGCAAAGTAATGACCCAAATGACATATGGTTATGTTTTTTGGAAGCAGGAAATTGCATGGCACCGACTTGACGACCTTCTACCTGCCAGTGATGATGTGATATCTCATGGAATCACTGGTCTCAAGCTTTATATGGTGGCTCCTTTCTTAACGTGAGCAAGCATCGTTTTGTAGTTTTCTTGATTTTCCTAAGCTCGCAGTTTAGTTTATGTTTAGTGGAATCAACATTTTGATGCAGGTCACTGAGATCTTGGATTCTGACACATCAGCGTCCTGTGGTTCCTAATTTTGACATGCCTCTTAAAGGTAATCAGTTTGTGACTTGCAAATCAGGACCTTTAGTTTTGATTGTCAAATATAATTTCGATTGTTTGCTAGCTCTTCTTAAATAAAGAACTGGAAGGAACAAAAATGGTATCAAATATTTGGAGCTTTTTCTTTATTAAATCTAAATACAATTCAGGGAACATTTCTGAAAAGTAGTGTTGTCAAGCAAAAATAACCTTCAAAATTAAAATAGAAACCGAAAAACGGGTAAATGCAGATGTCATGACCAGTGATCAAGGATATTTTAGGTGAAAATAGGGACCTGATATCATTCTTTTCGATGGAATTTCATGTGCAAACAGCCAAGATATTAGTGGGAGAACTGAACAAATTGGTGTGACAATATGATCATTCAGCTACCATCCATGTGAAAATTAGATGCAACGTTTCTCTGTCATATCTCTGTCTGGTCTTGCAATACACTTGGCTTATTGACTTTCTCGTGTTCTTTGCCAAAAAAAAAATTTATAATAATAAAAATTGATATACACTTGGCTCATCAGACTTTCTCGTGTTCTTTGCCAATGAGCTCTGTTGACACCATTATAAACTTTTGCTATTCTCTCAGGAGTCACCATGTGGAAGGTGAAGAATAGCTCGATGAGTAGTAGCTCGATGGTATTAGACAACCAATCCAGTAAATCGGATTCTGATCCAGGAAAGAGCTTCAGAAACTTCAAATTCGATACTGCCTCAATCTTGCAGGCCATGGAAAGTGCTTTTGCTGCT

mRNA sequence

ATGGCCGGCCTCCATCAGCCCTCAACTGCTCCGGTGAAGAACGGTCTCCCTCCCCAAGAACTCCTCGACGATCTTTGCAGCCGATTTGTGTTAAATGTGCCAAAGGAAGATCTACAATCATTCGAGAGGATTCTGTTTCTAGTTGAATATGCACATTGGTTCTATGAAGACAACTCAGTAGAAAATAATCCTTCACTGAAGTCATTTAATTTGAAGGAGTTCACTTCGTTATTATTTAACAGCTGTGATGTTTTGAAACCATATGTGCCCCACATAGATGACATATTTAAGGACTTCACTTCCTATAAGCTTCGAGTTCCTGTCACCGGGGCCATTATTTTAGATGAAACCTTTGAGAGGTGCTTACTAGTAAAGGGATGGAAAGGGTCAAGCTGGAGTTTTCCTCGTGGCAAAAAGAGCAAGGATGAAGAAGATCATGCTTGTGCCATTAGAGAAGTTTTGGAGGAAACTGGTTTTGACGTGTCAGCATTCCTTATCAAAGAGGATTTTATTGAATTGATGTTTGGACAACAAAGAGTGCGGCTCTACATTATCGCTGGGGTGAAAAACGATTCTTCCTTTGCGCCACTTACTAAGAAAGAGATCAGTGAAATTGCATGGCACCGACTTGACGACCTTCTACCTGCCAGTGATGATGTGATATCTCATGGAATCACTGGTCTCAAGCTTTATATGGTGGCTCCTTTCTTAACGTCACTGAGATCTTGGATTCTGACACATCAGCGTCCTGTGGTTCCTAATTTTGACATGCCTCTTAAAGGAGTCACCATGTGGAAGGTGAAGAATAGCTCGATGAGTAGTAGCTCGATGGTATTAGACAACCAATCCAGTAAATCGGATTCTGATCCAGGAAAGAGCTTCAGAAACTTCAAATTCGATACTGCCTCAATCTTGCAGGCCATGGAAAGTGCTTTTGCTGCT

Coding sequence (CDS)

ATGGCCGGCCTCCATCAGCCCTCAACTGCTCCGGTGAAGAACGGTCTCCCTCCCCAAGAACTCCTCGACGATCTTTGCAGCCGATTTGTGTTAAATGTGCCAAAGGAAGATCTACAATCATTCGAGAGGATTCTGTTTCTAGTTGAATATGCACATTGGTTCTATGAAGACAACTCAGTAGAAAATAATCCTTCACTGAAGTCATTTAATTTGAAGGAGTTCACTTCGTTATTATTTAACAGCTGTGATGTTTTGAAACCATATGTGCCCCACATAGATGACATATTTAAGGACTTCACTTCCTATAAGCTTCGAGTTCCTGTCACCGGGGCCATTATTTTAGATGAAACCTTTGAGAGGTGCTTACTAGTAAAGGGATGGAAAGGGTCAAGCTGGAGTTTTCCTCGTGGCAAAAAGAGCAAGGATGAAGAAGATCATGCTTGTGCCATTAGAGAAGTTTTGGAGGAAACTGGTTTTGACGTGTCAGCATTCCTTATCAAAGAGGATTTTATTGAATTGATGTTTGGACAACAAAGAGTGCGGCTCTACATTATCGCTGGGGTGAAAAACGATTCTTCCTTTGCGCCACTTACTAAGAAAGAGATCAGTGAAATTGCATGGCACCGACTTGACGACCTTCTACCTGCCAGTGATGATGTGATATCTCATGGAATCACTGGTCTCAAGCTTTATATGGTGGCTCCTTTCTTAACGTCACTGAGATCTTGGATTCTGACACATCAGCGTCCTGTGGTTCCTAATTTTGACATGCCTCTTAAAGGAGTCACCATGTGGAAGGTGAAGAATAGCTCGATGAGTAGTAGCTCGATGGTATTAGACAACCAATCCAGTAAATCGGATTCTGATCCAGGAAAGAGCTTCAGAAACTTCAAATTCGATACTGCCTCAATCTTGCAGGCCATGGAAAGTGCTTTTGCTGCT

Protein sequence

MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSVENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRVRLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSLRSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFDTASILQAMESAFAA

Homology

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BLAST of MS004227 vs. NCBI nr
Match: XP_022139266.1 (mRNA-decapping enzyme subunit 2-like [Momordica charantia])

HSP 1 Score: 630.6 bits (1625), Expect = 7.4e-177
Identity = 312/314 (99.36%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1   MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MAGLHQPS APVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MAGLHQPSIAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120
           ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER
Sbjct: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120

Query: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180
           CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV
Sbjct: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180

Query: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240
           RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL
Sbjct: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240

Query: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300
           RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD
Sbjct: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300

Query: 301 TASILQAMESAFAA 315
           TASILQAME AFAA
Sbjct: 301 TASILQAMEGAFAA 314

[Close]

BLAST of MS004227 vs. NCBI nr
Match: XP_038891421.1 (mRNA-decapping enzyme subunit 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 591.3 bits (1523), Expect = 5.0e-165
Identity = 289/314 (92.04%), Postives = 299/314 (95.22%), Query Frame = 0


Query: 1   MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MAGLH PS APVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MAGLHLPSNAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120
           ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTG IILDETFER
Sbjct: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGGIILDETFER 120

Query: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180
           CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREV EETGFDV+AFLIKEDFIE+MFGQQRV
Sbjct: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVSEETGFDVTAFLIKEDFIEVMFGQQRV 180

Query: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240
           RLYIIAGVKND++FAPLTKKEISEIAWHRLDDLLP SDDVISHGITGLKLYMVAPFL SL
Sbjct: 181 RLYIIAGVKNDTAFAPLTKKEISEIAWHRLDDLLPVSDDVISHGITGLKLYMVAPFLESL 240

Query: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300
           RSWIL HQ PV PNFDMP+KGVT+WKVKNSSMS+SS++ D QS K DSDPG+S RNFKFD
Sbjct: 241 RSWILKHQPPVAPNFDMPVKGVTIWKVKNSSMSNSSIIFDGQSIKLDSDPGRSLRNFKFD 300

Query: 301 TASILQAMESAFAA 315
           TASIL AMESAFAA
Sbjct: 301 TASILHAMESAFAA 314

[Close]

BLAST of MS004227 vs. NCBI nr
Match: XP_004142410.1 (mRNA-decapping enzyme subunit 2 [Cucumis sativus] >XP_031742317.1 mRNA-decapping enzyme subunit 2 [Cucumis sativus] >KGN52271.1 hypothetical protein Csa_007962 [Cucumis sativus])

HSP 1 Score: 587.0 bits (1512), Expect = 9.4e-164
Identity = 287/314 (91.40%), Postives = 297/314 (94.59%), Query Frame = 0


Query: 1   MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MAGLH PS A VKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MAGLHLPSNAHVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120
           ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTG IILDETFER
Sbjct: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGGIILDETFER 120

Query: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180
           CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDV+ FLIKEDFIE+MFGQQRV
Sbjct: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVTPFLIKEDFIEVMFGQQRV 180

Query: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240
           RLYIIAGVKND++FAPLTKKEISEIAWHRLDDLLP SDDVISHGITGLKLYMVAPFL SL
Sbjct: 181 RLYIIAGVKNDTAFAPLTKKEISEIAWHRLDDLLPVSDDVISHGITGLKLYMVAPFLESL 240

Query: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300
           RSWIL HQ PV PNFDMP+KG TMWKVKN+SMS+SS++ DNQ  K DSDPG+S RNFKFD
Sbjct: 241 RSWILKHQPPVAPNFDMPVKGFTMWKVKNTSMSNSSIIFDNQPIKLDSDPGRSLRNFKFD 300

Query: 301 TASILQAMESAFAA 315
           TASIL AMESAFAA
Sbjct: 301 TASILHAMESAFAA 314

[Close]

BLAST of MS004227 vs. NCBI nr
Match: XP_008446886.1 (PREDICTED: mRNA-decapping enzyme subunit 2-like [Cucumis melo] >KAA0034722.1 mRNA-decapping enzyme subunit 2-like [Cucumis melo var. makuwa] >TYK09275.1 mRNA-decapping enzyme subunit 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 587.0 bits (1512), Expect = 9.4e-164
Identity = 286/314 (91.08%), Postives = 298/314 (94.90%), Query Frame = 0


Query: 1   MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MA LH PS APVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MASLHLPSNAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120
           ENNPSLKSFNLKEFTSLLF+SCDVLKPYVPHIDDIFKDFTSYKLRVPVTG IILDETFER
Sbjct: 61  ENNPSLKSFNLKEFTSLLFSSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGGIILDETFER 120

Query: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180
           CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDV+ FLIKEDFIE+MFGQQRV
Sbjct: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVTPFLIKEDFIEVMFGQQRV 180

Query: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240
           RLYIIAGVKND++FAPLTKKEISEIAWHRLDDLLP SDDVISHGITGLKLYMVAPFL SL
Sbjct: 181 RLYIIAGVKNDTAFAPLTKKEISEIAWHRLDDLLPVSDDVISHGITGLKLYMVAPFLESL 240

Query: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300
           RSWIL HQ PV PNFDMP+KG TMWKVKN+SMS+SS++ DNQ  K DSDPG+S +NFKFD
Sbjct: 241 RSWILKHQPPVAPNFDMPVKGYTMWKVKNTSMSNSSIIFDNQPIKLDSDPGRSLKNFKFD 300

Query: 301 TASILQAMESAFAA 315
           TASILQAMESAFAA
Sbjct: 301 TASILQAMESAFAA 314

[Close]

BLAST of MS004227 vs. NCBI nr
Match: XP_038891420.1 (mRNA-decapping enzyme subunit 2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 578.6 bits (1490), Expect = 3.4e-161
Identity = 286/316 (90.51%), Postives = 296/316 (93.67%), Query Frame = 0


Query: 1   MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MAGLH PS APVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MAGLHLPSNAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSFNLKEFTSLLFNS--CDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETF 120
           ENNPSLKSFNLKEFTSL   S  CDVLKPYVPHIDDIFKDFTSYKLRVPVTG IILDETF
Sbjct: 61  ENNPSLKSFNLKEFTSLCILSIICDVLKPYVPHIDDIFKDFTSYKLRVPVTGGIILDETF 120

Query: 121 ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQ 180
           ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREV EETGFDV+AFLIKEDFIE+MFGQQ
Sbjct: 121 ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVSEETGFDVTAFLIKEDFIEVMFGQQ 180

Query: 181 RVRLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLT 240
           RVRLYIIAGVKND++FAPLTKKEISEIAWHRLDDLLP SDDVISHGITGLKLYMVAPFL 
Sbjct: 181 RVRLYIIAGVKNDTAFAPLTKKEISEIAWHRLDDLLPVSDDVISHGITGLKLYMVAPFLE 240

Query: 241 SLRSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFK 300
           SLRSWIL HQ PV PNFDMP+KGVT+WKVKNSSMS+SS++ D QS K DSDPG+S RNFK
Sbjct: 241 SLRSWILKHQPPVAPNFDMPVKGVTIWKVKNSSMSNSSIIFDGQSIKLDSDPGRSLRNFK 300

Query: 301 FDTASILQAMESAFAA 315
           FDTASIL AMESAFAA
Sbjct: 301 FDTASILHAMESAFAA 316

[Close]

BLAST of MS004227 vs. ExPASy Swiss-Prot
Match: Q8GW31 (mRNA-decapping enzyme subunit 2 OS=Arabidopsis thaliana OX=3702 GN=DCP2 PE=1 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.1e-119
Identity = 224/373 (60.05%), Postives = 265/373 (71.05%), Query Frame = 0


Query: 1   MAGLHQPSTAP--VKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDN 60
           M+GLH+ S++   + N LP +ELLDDLCSRFVLNVP+ED QSFERILFLVEYA+W+YEDN
Sbjct: 1   MSGLHRSSSSSKNIGNCLPSKELLDDLCSRFVLNVPEEDQQSFERILFLVEYAYWYYEDN 60

Query: 61  SVENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETF 120
           +VEN+P LKS +LKEFTSLLFNSCDVL+PYV HIDDIFKDFTSYK RVPVTGAIILDET+
Sbjct: 61  AVENDPKLKSLSLKEFTSLLFNSCDVLRPYVTHIDDIFKDFTSYKCRVPVTGAIILDETY 120

Query: 121 ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQ 180
           ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVS  L +E++IE +F QQ
Sbjct: 121 ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSKLLKREEYIEFVFRQQ 180

Query: 181 RVRLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLT 240
           RVRLYI+AGV  D+ FAPLTKKEISEI WHRLD L PAS++VI+HG++GLKLYMVAPFL+
Sbjct: 181 RVRLYIVAGVTEDTVFAPLTKKEISEITWHRLDHLQPASNEVITHGVSGLKLYMVAPFLS 240

Query: 241 SLRSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKS------------ 300
           SL+SWIL H  PV    + PLK + +W  + S   + +  +++Q+ KS            
Sbjct: 241 SLKSWILKHPSPVARRPNKPLKALCVWNARTSVGGNGTATVESQNRKSELRTTTMESNSR 300

Query: 301 ---------------------------------------------DSDPGKSFRNFKFDT 315
                                                        D  PG SF NFKF+ 
Sbjct: 301 KPELKRTTMESHSTKPELRKGTMESHNTTATVESHNTKPVVDHSQDIKPGGSFINFKFNQ 360

[Close]

BLAST of MS004227 vs. ExPASy Swiss-Prot
Match: O13828 (mRNA decapping complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dcp2 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-53
Identity = 108/226 (47.79%), Postives = 141/226 (62.39%), Query Frame = 0


Query: 20  ELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSVENNPSLKSFNLKEFTSLLF 79
           ++LDDL +RF+LN+P E+  S ER+ F +E AHWFYED     N  L S  L+ F++ LF
Sbjct: 10  QVLDDLSARFILNLPAEEQSSVERLCFQIEQAHWFYEDFIRAQNDQLPSLGLRVFSAKLF 69

Query: 80  NSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFERCLLVKGWKGSS-WSFPRGK 139
             C +L  +    ++ F DF  YK R+PV GAI+LD + ++C+LVKGWK SS W FP+GK
Sbjct: 70  AHCPLLWKWSKVHEEAFDDFLRYKTRIPVRGAIMLDMSMQQCVLVKGWKASSGWGFPKGK 129

Query: 140 KSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRVRLYIIAGVKNDSSFAPLT 199
             KDE D  CAIREV EETGFD S+ +   +FI++    Q VRLYII G+  D+ F   T
Sbjct: 130 IDKDESDVDCAIREVYEETGFDCSSRINPNEFIDMTIRGQNVRLYIIPGISLDTRFESRT 189

Query: 200 KKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSLRSWI 245
           +KEIS+I WH L DL     +         K YMV PFL  L+ WI
Sbjct: 190 RKEISKIEWHNLMDLPTFKKN--KPQTMKNKFYMVIPFLAPLKKWI 233

[Close]

BLAST of MS004227 vs. ExPASy Swiss-Prot
Match: Q9CYC6 (m7GpppN-mRNA hydrolase OS=Mus musculus OX=10090 GN=Dcp2 PE=1 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 3.5e-52
Identity = 99/231 (42.86%), Postives = 139/231 (60.17%), Query Frame = 0


Query: 18  PQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSVENNPSLKSFNLKEFTSL 77
           P  +LDDLCSRF+L++P E+  +  R+ F +E AHWFY D  ++N P L    +++F   
Sbjct: 9   PGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQCGIRDFAKA 68

Query: 78  LFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFERCLLVKGWKG-SSWSFPR 137
           +F+ C  L P    ++ I  ++  YK+ VP  GAIILDET E  LLV+G+   S W FP+
Sbjct: 69  VFSHCPFLLPQGEDVEKILDEWKEYKMGVPTYGAIILDETLENVLLVQGYLAKSGWGFPK 128

Query: 138 GKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRVRLYIIAGVKNDSSFAP 197
           GK +K+E  H CA REV EETGFD+  ++ K+D+IEL    Q  RLYII GV  D+ F P
Sbjct: 129 GKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGVPKDTKFNP 188

Query: 198 LTKKEISEIAWHRLDDLLPASDDVISHGITGL---KLYMVAPFLTSLRSWI 245
            T++EI  I W  ++ L    +D+      GL   K +M  PF+  LR W+
Sbjct: 189 KTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWL 239

[Close]

BLAST of MS004227 vs. ExPASy Swiss-Prot
Match: Q8IU60 (m7GpppN-mRNA hydrolase OS=Homo sapiens OX=9606 GN=DCP2 PE=1 SV=3)

HSP 1 Score: 206.1 bits (523), Expect = 5.9e-52
Identity = 97/231 (41.99%), Postives = 139/231 (60.17%), Query Frame = 0


Query: 18  PQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSVENNPSLKSFNLKEFTSL 77
           P  +LDDLCSRF+L++P E+  +  R+ F +E AHWFY D  ++N P L    +++F   
Sbjct: 9   PGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQCGIRDFAKA 68

Query: 78  LFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFERCLLVKGWKG-SSWSFPR 137
           +F+ C  L P    ++ +  ++  YK+ VP  GAIILDET E  LLV+G+   S W FP+
Sbjct: 69  VFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLAKSGWGFPK 128

Query: 138 GKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRVRLYIIAGVKNDSSFAP 197
           GK +K+E  H CA REV EETGFD+  ++ K+D+IEL    Q  RLYII G+  D+ F P
Sbjct: 129 GKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGIPKDTKFNP 188

Query: 198 LTKKEISEIAWHRLDDLLPASDDVISHGITGL---KLYMVAPFLTSLRSWI 245
            T++EI  I W  ++ L    +D+      GL   K +M  PF+  LR W+
Sbjct: 189 KTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWL 239

[Close]

BLAST of MS004227 vs. ExPASy Swiss-Prot
Match: Q5REQ8 (m7GpppN-mRNA hydrolase OS=Pongo abelii OX=9601 GN=DCP2 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.9e-52
Identity = 97/231 (41.99%), Postives = 139/231 (60.17%), Query Frame = 0


Query: 18  PQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSVENNPSLKSFNLKEFTSL 77
           P  +LDDLCSRF+L++P E+  +  R+ F +E AHWFY D  ++N P L    +++F   
Sbjct: 9   PGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLSQCGIRDFAKA 68

Query: 78  LFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFERCLLVKGWKG-SSWSFPR 137
           +F+ C  L P    ++ +  ++  YK+ VP  GAIILDET E  LLV+G+   S W FP+
Sbjct: 69  VFSHCPFLLPEGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLAKSGWGFPK 128

Query: 138 GKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRVRLYIIAGVKNDSSFAP 197
           GK +K+E  H CA REV EETGFD+  ++ K+D+IEL    Q  RLYII G+  D+ F P
Sbjct: 129 GKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGIPKDTKFNP 188

Query: 198 LTKKEISEIAWHRLDDLLPASDDVISHGITGL---KLYMVAPFLTSLRSWI 245
            T++EI  I W  ++ L    +D+      GL   K +M  PF+  LR W+
Sbjct: 189 KTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWL 239

[Close]

BLAST of MS004227 vs. ExPASy TrEMBL
Match: A0A6J1CC63 (mRNA-decapping enzyme subunit 2-like OS=Momordica charantia OX=3673 GN=LOC111010222 PE=3 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 3.6e-177
Identity = 312/314 (99.36%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1   MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MAGLHQPS APVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MAGLHQPSIAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120
           ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER
Sbjct: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120

Query: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180
           CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV
Sbjct: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180

Query: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240
           RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL
Sbjct: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240

Query: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300
           RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD
Sbjct: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300

Query: 301 TASILQAMESAFAA 315
           TASILQAME AFAA
Sbjct: 301 TASILQAMEGAFAA 314

[Close]

BLAST of MS004227 vs. ExPASy TrEMBL
Match: A0A5D3CCQ6 (mRNA-decapping enzyme subunit 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002700 PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.6e-164
Identity = 286/314 (91.08%), Postives = 298/314 (94.90%), Query Frame = 0


Query: 1   MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MA LH PS APVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MASLHLPSNAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120
           ENNPSLKSFNLKEFTSLLF+SCDVLKPYVPHIDDIFKDFTSYKLRVPVTG IILDETFER
Sbjct: 61  ENNPSLKSFNLKEFTSLLFSSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGGIILDETFER 120

Query: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180
           CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDV+ FLIKEDFIE+MFGQQRV
Sbjct: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVTPFLIKEDFIEVMFGQQRV 180

Query: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240
           RLYIIAGVKND++FAPLTKKEISEIAWHRLDDLLP SDDVISHGITGLKLYMVAPFL SL
Sbjct: 181 RLYIIAGVKNDTAFAPLTKKEISEIAWHRLDDLLPVSDDVISHGITGLKLYMVAPFLESL 240

Query: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300
           RSWIL HQ PV PNFDMP+KG TMWKVKN+SMS+SS++ DNQ  K DSDPG+S +NFKFD
Sbjct: 241 RSWILKHQPPVAPNFDMPVKGYTMWKVKNTSMSNSSIIFDNQPIKLDSDPGRSLKNFKFD 300

Query: 301 TASILQAMESAFAA 315
           TASILQAMESAFAA
Sbjct: 301 TASILQAMESAFAA 314

[Close]

BLAST of MS004227 vs. ExPASy TrEMBL
Match: A0A0A0KWT4 (Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622860 PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.6e-164
Identity = 287/314 (91.40%), Postives = 297/314 (94.59%), Query Frame = 0


Query: 1   MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MAGLH PS A VKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MAGLHLPSNAHVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120
           ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTG IILDETFER
Sbjct: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGGIILDETFER 120

Query: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180
           CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDV+ FLIKEDFIE+MFGQQRV
Sbjct: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVTPFLIKEDFIEVMFGQQRV 180

Query: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240
           RLYIIAGVKND++FAPLTKKEISEIAWHRLDDLLP SDDVISHGITGLKLYMVAPFL SL
Sbjct: 181 RLYIIAGVKNDTAFAPLTKKEISEIAWHRLDDLLPVSDDVISHGITGLKLYMVAPFLESL 240

Query: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300
           RSWIL HQ PV PNFDMP+KG TMWKVKN+SMS+SS++ DNQ  K DSDPG+S RNFKFD
Sbjct: 241 RSWILKHQPPVAPNFDMPVKGFTMWKVKNTSMSNSSIIFDNQPIKLDSDPGRSLRNFKFD 300

Query: 301 TASILQAMESAFAA 315
           TASIL AMESAFAA
Sbjct: 301 TASILHAMESAFAA 314

[Close]

BLAST of MS004227 vs. ExPASy TrEMBL
Match: A0A1S3BG59 (mRNA-decapping enzyme subunit 2-like OS=Cucumis melo OX=3656 GN=LOC103489466 PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.6e-164
Identity = 286/314 (91.08%), Postives = 298/314 (94.90%), Query Frame = 0


Query: 1   MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MA LH PS APVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MASLHLPSNAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120
           ENNPSLKSFNLKEFTSLLF+SCDVLKPYVPHIDDIFKDFTSYKLRVPVTG IILDETFER
Sbjct: 61  ENNPSLKSFNLKEFTSLLFSSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGGIILDETFER 120

Query: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180
           CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDV+ FLIKEDFIE+MFGQQRV
Sbjct: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVTPFLIKEDFIEVMFGQQRV 180

Query: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240
           RLYIIAGVKND++FAPLTKKEISEIAWHRLDDLLP SDDVISHGITGLKLYMVAPFL SL
Sbjct: 181 RLYIIAGVKNDTAFAPLTKKEISEIAWHRLDDLLPVSDDVISHGITGLKLYMVAPFLESL 240

Query: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300
           RSWIL HQ PV PNFDMP+KG TMWKVKN+SMS+SS++ DNQ  K DSDPG+S +NFKFD
Sbjct: 241 RSWILKHQPPVAPNFDMPVKGYTMWKVKNTSMSNSSIIFDNQPIKLDSDPGRSLKNFKFD 300

Query: 301 TASILQAMESAFAA 315
           TASILQAMESAFAA
Sbjct: 301 TASILQAMESAFAA 314

[Close]

BLAST of MS004227 vs. ExPASy TrEMBL
Match: A0A6J1IK27 (mRNA-decapping enzyme subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111477819 PE=3 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 5.8e-159
Identity = 281/314 (89.49%), Postives = 292/314 (92.99%), Query Frame = 0


Query: 1   MAGLHQPSTAPVKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSV 60
           MAG+HQP+ A VKNGLPPQELLDDLCSRFVLNVP+EDLQSFERILFLVEYAHWFYEDNSV
Sbjct: 1   MAGIHQPANASVKNGLPPQELLDDLCSRFVLNVPREDLQSFERILFLVEYAHWFYEDNSV 60

Query: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETFER 120
           ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTG IILDETFER
Sbjct: 61  ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGGIILDETFER 120

Query: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQRV 180
           CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDV+ FLI++DF+E+MFGQQRV
Sbjct: 121 CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVTPFLIEDDFLEVMFGQQRV 180

Query: 181 RLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLTSL 240
           RLYIIAGVK D  FAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFL SL
Sbjct: 181 RLYIIAGVKTDIPFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLNSL 240

Query: 241 RSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKSDSDPGKSFRNFKFD 300
           RSWIL HQ PV PNFDM +KGVTMWKVKN     SS+V D Q +K DSDPGKS RNFKFD
Sbjct: 241 RSWILKHQPPVNPNFDMHVKGVTMWKVKN-----SSIVFDGQQTKFDSDPGKSLRNFKFD 300

Query: 301 TASILQAMESAFAA 315
           TASILQAMESAFAA
Sbjct: 301 TASILQAMESAFAA 309

[Close]

BLAST of MS004227 vs. TAIR 10
Match: AT5G13570.1 (decapping 2 )

HSP 1 Score: 431.0 bits (1107), Expect = 8.1e-121
Identity = 224/373 (60.05%), Postives = 265/373 (71.05%), Query Frame = 0


Query: 1   MAGLHQPSTAP--VKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDN 60
           M+GLH+ S++   + N LP +ELLDDLCSRFVLNVP+ED QSFERILFLVEYA+W+YEDN
Sbjct: 1   MSGLHRSSSSSKNIGNCLPSKELLDDLCSRFVLNVPEEDQQSFERILFLVEYAYWYYEDN 60

Query: 61  SVENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETF 120
           +VEN+P LKS +LKEFTSLLFNSCDVL+PYV HIDDIFKDFTSYK RVPVTGAIILDET+
Sbjct: 61  AVENDPKLKSLSLKEFTSLLFNSCDVLRPYVTHIDDIFKDFTSYKCRVPVTGAIILDETY 120

Query: 121 ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSAFLIKEDFIELMFGQQ 180
           ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVS  L +E++IE +F QQ
Sbjct: 121 ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVSKLLKREEYIEFVFRQQ 180

Query: 181 RVRLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLT 240
           RVRLYI+AGV  D+ FAPLTKKEISEI WHRLD L PAS++VI+HG++GLKLYMVAPFL+
Sbjct: 181 RVRLYIVAGVTEDTVFAPLTKKEISEITWHRLDHLQPASNEVITHGVSGLKLYMVAPFLS 240

Query: 241 SLRSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSKS------------ 300
           SL+SWIL H  PV    + PLK + +W  + S   + +  +++Q+ KS            
Sbjct: 241 SLKSWILKHPSPVARRPNKPLKALCVWNARTSVGGNGTATVESQNRKSELRTTTMESNSR 300

Query: 301 ---------------------------------------------DSDPGKSFRNFKFDT 315
                                                        D  PG SF NFKF+ 
Sbjct: 301 KPELKRTTMESHSTKPELRKGTMESHNTTATVESHNTKPVVDHSQDIKPGGSFINFKFNQ 360

[Close]

BLAST of MS004227 vs. TAIR 10
Match: AT5G13570.2 (decapping 2 )

HSP 1 Score: 421.8 bits (1083), Expect = 4.9e-118
Identity = 224/386 (58.03%), Postives = 265/386 (68.65%), Query Frame = 0


Query: 1   MAGLHQPSTAP--VKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFLVEYAHWFYEDN 60
           M+GLH+ S++   + N LP +ELLDDLCSRFVLNVP+ED QSFERILFLVEYA+W+YEDN
Sbjct: 1   MSGLHRSSSSSKNIGNCLPSKELLDDLCSRFVLNVPEEDQQSFERILFLVEYAYWYYEDN 60

Query: 61  SVENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGAIILDETF 120
           +VEN+P LKS +LKEFTSLLFNSCDVL+PYV HIDDIFKDFTSYK RVPVTGAIILDET+
Sbjct: 61  AVENDPKLKSLSLKEFTSLLFNSCDVLRPYVTHIDDIFKDFTSYKCRVPVTGAIILDETY 120

Query: 121 ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIRE-------------VLEETGFDVSAFL 180
           ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIRE             VLEETGFDVS  L
Sbjct: 121 ERCLLVKGWKGSSWSFPRGKKSKDEEDHACAIRELSSAILLVNVAFQVLEETGFDVSKLL 180

Query: 181 IKEDFIELMFGQQRVRLYIIAGVKNDSSFAPLTKKEISEIAWHRLDDLLPASDDVISHGI 240
            +E++IE +F QQRVRLYI+AGV  D+ FAPLTKKEISEI WHRLD L PAS++VI+HG+
Sbjct: 181 KREEYIEFVFRQQRVRLYIVAGVTEDTVFAPLTKKEISEITWHRLDHLQPASNEVITHGV 240

Query: 241 TGLKLYMVAPFLTSLRSWILTHQRPVVPNFDMPLKGVTMWKVKNSSMSSSSMVLDNQSSK 300
           +GLKLYMVAPFL+SL+SWIL H  PV    + PLK + +W  + S   + +  +++Q+ K
Sbjct: 241 SGLKLYMVAPFLSSLKSWILKHPSPVARRPNKPLKALCVWNARTSVGGNGTATVESQNRK 300

Query: 301 S---------------------------------------------------------DS 315
           S                                                         D 
Sbjct: 301 SELRTTTMESNSRKPELKRTTMESHSTKPELRKGTMESHNTTATVESHNTKPVVDHSQDI 360

The following BLAST results are available for this feature:

BLAST of MS004227 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139266.1	7.4e-177	99.36	mRNA-decapping enzyme subunit 2-like [Momordica charantia]	[more]
XP_038891421.1	5.0e-165	92.04	mRNA-decapping enzyme subunit 2-like isoform X2 [Benincasa hispida]	[more]
XP_004142410.1	9.4e-164	91.40	mRNA-decapping enzyme subunit 2 [Cucumis sativus] >XP_031742317.1 mRNA-decapping...	[more]
XP_008446886.1	9.4e-164	91.08	PREDICTED: mRNA-decapping enzyme subunit 2-like [Cucumis melo] >KAA0034722.1 mRN...	[more]
XP_038891420.1	3.4e-161	90.51	mRNA-decapping enzyme subunit 2-like isoform X1 [Benincasa hispida]	[more]

BLAST of MS004227 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW31	1.1e-119	60.05	mRNA-decapping enzyme subunit 2 OS=Arabidopsis thaliana OX=3702 GN=DCP2 PE=1 SV=...	[more]
O13828	2.4e-53	47.79	mRNA decapping complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9CYC6	3.5e-52	42.86	m7GpppN-mRNA hydrolase OS=Mus musculus OX=10090 GN=Dcp2 PE=1 SV=2	[more]
Q8IU60	5.9e-52	41.99	m7GpppN-mRNA hydrolase OS=Homo sapiens OX=9606 GN=DCP2 PE=1 SV=3	[more]
Q5REQ8	5.9e-52	41.99	m7GpppN-mRNA hydrolase OS=Pongo abelii OX=9601 GN=DCP2 PE=2 SV=1	[more]

BLAST of MS004227 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CC63	3.6e-177	99.36	mRNA-decapping enzyme subunit 2-like OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A5D3CCQ6	4.6e-164	91.08	mRNA-decapping enzyme subunit 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KWT4	4.6e-164	91.40	Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G62...	[more]
A0A1S3BG59	4.6e-164	91.08	mRNA-decapping enzyme subunit 2-like OS=Cucumis melo OX=3656 GN=LOC103489466 PE=...	[more]
A0A6J1IK27	5.8e-159	89.49	mRNA-decapping enzyme subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111477819...	[more]

BLAST of MS004227 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13570.1	8.1e-121	60.05	decapping 2	[more]
AT5G13570.2	4.9e-118	58.03	decapping 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007722	mRNA decapping protein 2, Box A domain	SMART	SM01125	DCP2_2	coord: 19..103 e-value: 2.9E-43 score: 159.7
IPR007722	mRNA decapping protein 2, Box A domain	PFAM	PF05026	DCP2	coord: 20..102 e-value: 2.1E-28 score: 98.4
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 105..245 e-value: 4.1E-86 score: 289.8
None	No IPR available	PANTHER	PTHR23114	M7GPPPN-MRNA HYDROLASE	coord: 13..261
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 106..217 e-value: 3.6E-13 score: 49.7
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 104..233 score: 13.435682
IPR036189	mRNA decapping protein 2, Box A domain superfamily	GENE3D	1.10.10.1050	Dcp2, box A domain	coord: 21..104 e-value: 4.1E-86 score: 289.8
IPR036189	mRNA decapping protein 2, Box A domain superfamily	SUPERFAMILY	140586	Dcp2 domain-like	coord: 14..103
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 137..158
IPR044099	mRNA decapping enzyme 2 , NUDIX hydrolase domain	CDD	cd03672	Dcp2p	coord: 106..250 e-value: 9.18007E-73 score: 219.417
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 106..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS004227.1	MS004227.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0050072	m7G(5')pppN diphosphatase activity
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0003723	RNA binding