MS004170 (gene) Bitter gourd (TR) v1

Overview
NameMS004170
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycosyltransferase
Locationscaffold92: 482480 .. 482632 (-)
RNA-Seq ExpressionMS004170
SyntenyMS004170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTCTTACCCTATCAATCTCCAATCCATCAGCCACCGCCTGCAGGAAAATTTCTGGGCTTCCATGGAATTGGTGGAGCTCAATCTTCCATCTCTGCCGGAGCTTCCTCCTCATATGCACACCACCAATGGCCTTCCTCTACATTTAATTCCT

mRNA sequence

TGTTCTTACCCTATCAATCTCCAATCCATCAGCCACCGCCTGCAGGAAAATTTCTGGGCTTCCATGGAATTGGTGGAGCTCAATCTTCCATCTCTGCCGGAGCTTCCTCCTCATATGCACACCACCAATGGCCTTCCTCTACATTTAATTCCT

Coding sequence (CDS)

TGTTCTTACCCTATCAATCTCCAATCCATCAGCCACCGCCTGCAGGAAAATTTCTGGGCTTCCATGGAATTGGTGGAGCTCAATCTTCCATCTCTGCCGGAGCTTCCTCCTCATATGCACACCACCAATGGCCTTCCTCTACATTTAATTCCT

Protein sequence

CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHLIP
Homology
BLAST of MS004170 vs. NCBI nr
Match: PSR98773.1 (Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase [Actinidia chinensis var. chinensis])

HSP 1 Score: 79.0 bits (193), Expect = 1.4e-11
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHLI 51
          CS PINL SI  R+ ENF  S+ELVEL+LPSLPELPPH HTTNGLP HL+
Sbjct: 42 CSTPINLSSIQKRVTENFSLSLELVELHLPSLPELPPHHHTTNGLPPHLL 91

BLAST of MS004170 vs. NCBI nr
Match: XP_028094073.1 (beta-D-glucosyl crocetin beta-1,6-glucosyltransferase-like [Camellia sinensis])

HSP 1 Score: 77.4 bits (189), Expect = 3.9e-11
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHLIP 52
          CS PINL SI  R+ E +  S+ELVE++LPSLPELPPH HTTNGLP HLIP
Sbjct: 41 CSTPINLNSIKKRITEKYSHSIELVEIHLPSLPELPPHNHTTNGLPNHLIP 91

BLAST of MS004170 vs. NCBI nr
Match: KAF5959052.1 (hypothetical protein HYC85_000261 [Camellia sinensis])

HSP 1 Score: 77.0 bits (188), Expect = 5.2e-11
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHLIP 52
          CS PINL SI  R+ EN+  S+ELVE++LPS P+LPPH HTTNGLP HLIP
Sbjct: 41 CSTPINLSSIKKRITENYSHSIELVEIHLPSSPDLPPHHHTTNGLPTHLIP 91

BLAST of MS004170 vs. NCBI nr
Match: KAF5959042.1 (hypothetical protein HYC85_000251 [Camellia sinensis])

HSP 1 Score: 76.6 bits (187), Expect = 6.7e-11
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHL 50
          CS PINL+SI  R+ E +  S+ELVE++LPSLPELPPH HTTNGLP+HL
Sbjct: 41 CSTPINLKSIKKRITEKYSLSIELVEIHLPSLPELPPHYHTTNGLPIHL 89

BLAST of MS004170 vs. NCBI nr
Match: KAG6680353.1 (hypothetical protein I3842_13G037400 [Carya illinoinensis])

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-10
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHLIP 52
          CS P+NL+ I  +L E +  S+ELVEL+LPSLPELPPH HTTNGLP HL+P
Sbjct: 41 CSTPVNLRPIKEKLPEKYSLSIELVELHLPSLPELPPHYHTTNGLPPHLMP 91

BLAST of MS004170 vs. ExPASy Swiss-Prot
Match: F8WKW8 (Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase OS=Gardenia jasminoides OX=114476 GN=UGT94E5 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.9e-10
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHLI 51
          CS PINL  I  R+   +  +++LVEL+LP  PELPPH HTTNGLP HL+
Sbjct: 30 CSTPINLGFIKKRITGKYSVTIKLVELHLPDTPELPPHYHTTNGLPPHLM 79

BLAST of MS004170 vs. ExPASy Swiss-Prot
Match: A0A0A6ZFY4 (UDP-glucosyltransferase 29 OS=Panax ginseng OX=4054 GN=UGT29 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-09
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHLI 51
          CS PINL SI     ++  AS++LVEL+LPS P+LPPH HTTNGLP HL+
Sbjct: 41 CSTPINLSSIK---DKDSSASIKLVELHLPSSPDLPPHYHTTNGLPSHLM 87

BLAST of MS004170 vs. ExPASy Swiss-Prot
Match: Q8GVE3 (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima OX=37334 GN=C12RT1 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 1.4e-06
Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLP-SLPELPPHMHTTNGLPLHLI 51
          CS P NLQS    +++NF +S++L+EL LP + PELP    TT  LP HLI
Sbjct: 42 CSTPNNLQSFGRNVEKNFSSSIQLIELQLPNTFPELPSQNQTTKNLPPHLI 92

BLAST of MS004170 vs. ExPASy Swiss-Prot
Match: Q5NTH0 (Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase OS=Bellis perennis OX=41492 GN=UGAT PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.3e-06
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHL 50
          CS   N+Q + + L   +  S++L+ELNLPS  ELP   HTT+GLP HL
Sbjct: 43 CSSQTNMQYLKNNLTSQYSKSIQLIELNLPSSSELPLQYHTTHGLPPHL 91

BLAST of MS004170 vs. ExPASy TrEMBL
Match: A0A2R6PYG1 (Glycosyltransferase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc25298 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.6e-12
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHLI 51
          CS PINL SI  R+ ENF  S+ELVEL+LPSLPELPPH HTTNGLP HL+
Sbjct: 42 CSTPINLSSIQKRVTENFSLSLELVELHLPSLPELPPHHHTTNGLPPHLL 91

BLAST of MS004170 vs. ExPASy TrEMBL
Match: A0A7J7I1Y3 (Glycosyltransferase OS=Camellia sinensis OX=4442 GN=HYC85_000261 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-11
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHLIP 52
          CS PINL SI  R+ EN+  S+ELVE++LPS P+LPPH HTTNGLP HLIP
Sbjct: 41 CSTPINLSSIKKRITENYSHSIELVEIHLPSSPDLPPHHHTTNGLPTHLIP 91

BLAST of MS004170 vs. ExPASy TrEMBL
Match: A0A7J7I1X2 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_000251 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-11
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHL 50
          CS PINL+SI  R+ E +  S+ELVE++LPSLPELPPH HTTNGLP+HL
Sbjct: 41 CSTPINLKSIKKRITEKYSLSIELVEIHLPSLPELPPHYHTTNGLPIHL 89

BLAST of MS004170 vs. ExPASy TrEMBL
Match: A0A7J7I1Y0 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_000259 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.6e-11
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHL 50
          CS PINL+SI  R+ + +  S+ELVE++LPSLPELPPH HTTNGLPLHL
Sbjct: 41 CSTPINLKSIKKRITDKYSLSIELVEIHLPSLPELPPHHHTTNGLPLHL 89

BLAST of MS004170 vs. ExPASy TrEMBL
Match: A0A7J7I2A5 (UDPGT domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_000278 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.6e-11
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 1  CSYPINLQSISHRLQENFWASMELVELNLPSLPELPPHMHTTNGLPLHL 50
          CS PINL+SI +R+ E +  S+ELVE++LPSLPELPPH HTTNGLP HL
Sbjct: 30 CSTPINLKSIKNRITERYSHSIELVEIHLPSLPELPPHYHTTNGLPTHL 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PSR98773.11.4e-1174.00Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase [Actinidia chinensis var. ... [more]
XP_028094073.13.9e-1170.59beta-D-glucosyl crocetin beta-1,6-glucosyltransferase-like [Camellia sinensis][more]
KAF5959052.15.2e-1168.63hypothetical protein HYC85_000261 [Camellia sinensis][more]
KAF5959042.16.7e-1169.39hypothetical protein HYC85_000251 [Camellia sinensis][more]
KAG6680353.11.1e-1066.67hypothetical protein I3842_13G037400 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
F8WKW85.9e-1058.00Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase OS=Gardenia jasminoides OX... [more]
A0A0A6ZFY41.7e-0962.00UDP-glucosyltransferase 29 OS=Panax ginseng OX=4054 GN=UGT29 PE=1 SV=1[more]
Q8GVE31.4e-0650.98Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima OX=37... [more]
Q5NTH02.3e-0648.98Cyanidin-3-O-glucoside 2-O-glucuronosyltransferase OS=Bellis perennis OX=41492 G... [more]
Match NameE-valueIdentityDescription
A0A2R6PYG16.6e-1274.00Glycosyltransferase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Ac... [more]
A0A7J7I1Y32.5e-1168.63Glycosyltransferase OS=Camellia sinensis OX=4442 GN=HYC85_000261 PE=3 SV=1[more]
A0A7J7I1X23.3e-1169.39Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_000251 PE=4 SV=1[more]
A0A7J7I1Y05.6e-1169.39Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_000259 PE=4 SV=1[more]
A0A7J7I2A55.6e-1169.39UDPGT domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_000278 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR48044:SF43CYANIDIN-3-O-GLUCOSIDE 2-O-GLUCURONOSYLTRANSFERASE-LIKEcoord: 1..50
NoneNo IPR availablePANTHERPTHR48044GLYCOSYLTRANSFERASEcoord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS004170.1MS004170.1mRNA