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MS003925 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCATTGGATATGAGCAGTATGGGTAAAGGTAAAATATGGATTAACGGTCAGAGCATCGGGGGCCATTCGCCTGCATACATCGCACACGGTAGTTGTCGCAAATGCAGCTATGTTGGAACCTTTAACAAGAAGAAATGTCAATCGAACCGTGGAGAACCATCTCAGAGATGGTAAAAAGAGACCCTCTGGACAAATATTTATAAGTTTCATTTACTTATCGTCTTGATGCATACTTAACGATAACATCTTTAAAATTTCAGGTATTATGTTTCCCGCGCTTGGTTGAACCCAAGTGGGAACGTATTGGTAATTTTTGAAGAATGGGGTGCAATCCTGATGGGATTTCTTTGGTTAACAGATCCGTGTCC GCATTGGATATGAGCAGTATGGGTAAAGGTAAAATATGGATTAACGGTCAGAGCATCGGGGGCCATTCGCCTGCATACATCGCACACGGTAGTTGTCGCAAATGCAGCTATGTTGGAACCTTTAACAAGAAGAAATGTCAATCGAACCGTGGAGAACCATCTCAGAGATGGTATTATGTTTCCCGCGCTTGGTTGAACCCAAGTGGGAACGTATTGGTAATTTTTGAAGAATGGGGTAATCCTGATGGGATTTCTTTGGTTAACAGATCCGTGTCC GCATTGGATATGAGCAGTATGGGTAAAGGTAAAATATGGATTAACGGTCAGAGCATCGGGGGCCATTCGCCTGCATACATCGCACACGGTAGTTGTCGCAAATGCAGCTATGTTGGAACCTTTAACAAGAAGAAATGTCAATCGAACCGTGGAGAACCATCTCAGAGATGGTATTATGTTTCCCGCGCTTGGTTGAACCCAAGTGGGAACGTATTGGTAATTTTTGAAGAATGGGGTAATCCTGATGGGATTTCTTTGGTTAACAGATCCGTGTCC ALDMSSMGKGKIWINGQSIGGHSPAYIAHGSCRKCSYVGTFNKKKCQSNRGEPSQRWYYVSRAWLNPSGNVLVIFEEWGNPDGISLVNRSVS Homology
BLAST of MS003925 vs. NCBI nr
Match: XP_022147712.1 (beta-galactosidase-like [Momordica charantia]) HSP 1 Score: 170.2 bits (430), Expect = 8.1e-39 Identity = 80/93 (86.02%), Postives = 84/93 (90.32%), Query Frame = 0
BLAST of MS003925 vs. NCBI nr
Match: XP_022147714.1 (beta-galactosidase-like isoform X1 [Momordica charantia]) HSP 1 Score: 160.2 bits (404), Expect = 8.4e-36 Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0
BLAST of MS003925 vs. NCBI nr
Match: XP_022147715.1 (beta-galactosidase-like isoform X2 [Momordica charantia]) HSP 1 Score: 160.2 bits (404), Expect = 8.4e-36 Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0
BLAST of MS003925 vs. NCBI nr
Match: XP_022147716.1 (beta-galactosidase-like [Momordica charantia]) HSP 1 Score: 158.7 bits (400), Expect = 2.4e-35 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of MS003925 vs. NCBI nr
Match: XP_011659980.2 (beta-galactosidase [Cucumis sativus] >KAE8653427.1 hypothetical protein Csa_007623 [Cucumis sativus]) HSP 1 Score: 155.2 bits (391), Expect = 2.7e-34 Identity = 73/93 (78.49%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of MS003925 vs. ExPASy Swiss-Prot
Match: P48981 (Beta-galactosidase OS=Malus domestica OX=3750 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.6e-32 Identity = 60/93 (64.52%), Postives = 75/93 (80.65%), Query Frame = 0
BLAST of MS003925 vs. ExPASy Swiss-Prot
Match: Q9SCW1 (Beta-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BGAL1 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 7.6e-32 Identity = 62/92 (67.39%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS003925 vs. ExPASy Swiss-Prot
Match: Q9LFA6 (Beta-galactosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BGAL2 PE=2 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 1.7e-31 Identity = 58/91 (63.74%), Postives = 75/91 (82.42%), Query Frame = 0
BLAST of MS003925 vs. ExPASy Swiss-Prot
Match: P45582 (Beta-galactosidase OS=Asparagus officinalis OX=4686 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 3.8e-31 Identity = 62/93 (66.67%), Postives = 75/93 (80.65%), Query Frame = 0
BLAST of MS003925 vs. ExPASy Swiss-Prot
Match: Q9SCV0 (Beta-galactosidase 12 OS=Arabidopsis thaliana OX=3702 GN=BGAL12 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 8.4e-31 Identity = 57/91 (62.64%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of MS003925 vs. ExPASy TrEMBL
Match: A0A6J1D352 (Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111016576 PE=3 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 3.9e-39 Identity = 80/93 (86.02%), Postives = 84/93 (90.32%), Query Frame = 0
BLAST of MS003925 vs. ExPASy TrEMBL
Match: A0A6J1D1U4 (Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111016580 PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36 Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0
BLAST of MS003925 vs. ExPASy TrEMBL
Match: A0A6J1D0X4 (Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111016580 PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36 Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0
BLAST of MS003925 vs. ExPASy TrEMBL
Match: A0A6J1D372 (Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111016582 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of MS003925 vs. ExPASy TrEMBL
Match: A0A5D3CEY5 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002360 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.9e-34 Identity = 71/93 (76.34%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of MS003925 vs. TAIR 10
Match: AT3G13750.1 (beta galactosidase 1 ) HSP 1 Score: 137.5 bits (345), Expect = 5.4e-33 Identity = 62/92 (67.39%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS003925 vs. TAIR 10
Match: AT3G52840.1 (beta-galactosidase 2 ) HSP 1 Score: 136.3 bits (342), Expect = 1.2e-32 Identity = 58/91 (63.74%), Postives = 75/91 (82.42%), Query Frame = 0
BLAST of MS003925 vs. TAIR 10
Match: AT4G26140.1 (beta-galactosidase 12 ) HSP 1 Score: 134.0 bits (336), Expect = 6.0e-32 Identity = 57/91 (62.64%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of MS003925 vs. TAIR 10
Match: AT5G56870.1 (beta-galactosidase 4 ) HSP 1 Score: 123.2 bits (308), Expect = 1.1e-28 Identity = 57/91 (62.64%), Postives = 74/91 (81.32%), Query Frame = 0
BLAST of MS003925 vs. TAIR 10
Match: AT4G36360.1 (beta-galactosidase 3 ) HSP 1 Score: 120.2 bits (300), Expect = 8.9e-28 Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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