MS003751 (gene) Bitter gourd (TR) v1

Overview
NameMS003751
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold127: 194913 .. 195602 (-)
RNA-Seq ExpressionMS003751
SyntenyMS003751
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGTTCCCATCTCGAATACATTGTAATCAGAGCATTTCCAGCAAAAACATCACCTTCAAATCCACATTTCAGGGTATGGGTATGCAACTGCCAACCAAAAAGAAAATCTTCTCCATCTAAGCAAAAGGCAAGCGTGGTAGTATAGGTCACAGGATCAAACTTAACCCCATTTAAATTCATCCTAACAACAAAACCCAAAGCGCCCTCACTCTTCTGGAACCCGGAAAGAATAGTATTCCACGAAACAGTATCTGGGACATGTAAATTCTCGAAGACACTAAAAGCCATCTCAAGCTGCCCAGATTTACAGTACATATTCATCAAAGAGTTAGAGACTGTAATATGCGAAACAAGCCCAGAAGAAATAACAAATCCATGAATTTGTCTACCTAGTTTAGGGACACCGCAACAGGCCTTCAGGGCGAGGGCCAGAGTAAACTCATCGGCATTCCCATCAAGACCCCACCGAATCTGCTTCTTGAAAAAGCGAAGGGCTTGAAGTGCTTCGCCCCTGTGCAAGTGATCGAGTAAGAGGCGGTTGGCAGAGGCTGAATTTGGAGGAGGACTTTGATCAAACAGGTGGTGGTCATGTTGGAAAGAGCGGAAAAAATTGAGGCTTGGGGATCGTTGTTTGGAGATGACATGAAAGGATTTGAAATTCAGATGGCGGGTAAGCATGAGATCGAAGGT

mRNA sequence

ACGTTCCCATCTCGAATACATTGTAATCAGAGCATTTCCAGCAAAAACATCACCTTCAAATCCACATTTCAGGGTATGGGATCAAACTTAACCCCATTTAAATTCATCCTAACAACAAAACCCAAAGCGCCCTCACTCTTCTGGAACCCGGAAAGAATAGTATTCCACGAAACAGTATCTGGGACATGTAAATTCTCGAAGACACTAAAAGCCATCTCAAGCTGCCCAGATTTACAGGACACCGCAACAGGCCTTCAGGGCGAGGGCCAGAGTAAACTCATCGGCATTCCCATCAAGACCCCACCGAATCTGCTTCTTGAAAAAGCGAAGGGCTTGAAGTGCTTCGCCCCTGCAAGTGATCGAGTAAGAGGCGGTTGGCAGAGGCTGAATTTGGAGGAGGACTTTGATCAAACAGGTGGTGGTCATGTTGAGGCTTGGGGATCGTTGTTTGGAGATGACATGAAAGGATTTGAAATTCAGATGGCGGGTAAGCATGAGATCGAAGGT

Coding sequence (CDS)

ACGTTCCCATCTCGAATACATTGTAATCAGAGCATTTCCAGCAAAAACATCACCTTCAAATCCACATTTCAGGGTATGGGATCAAACTTAACCCCATTTAAATTCATCCTAACAACAAAACCCAAAGCGCCCTCACTCTTCTGGAACCCGGAAAGAATAGTATTCCACGAAACAGTATCTGGGACATGTAAATTCTCGAAGACACTAAAAGCCATCTCAAGCTGCCCAGATTTACAGGACACCGCAACAGGCCTTCAGGGCGAGGGCCAGAGTAAACTCATCGGCATTCCCATCAAGACCCCACCGAATCTGCTTCTTGAAAAAGCGAAGGGCTTGAAGTGCTTCGCCCCTGCAAGTGATCGAGTAAGAGGCGGTTGGCAGAGGCTGAATTTGGAGGAGGACTTTGATCAAACAGGTGGTGGTCATGTTGAGGCTTGGGGATCGTTGTTTGGAGATGACATGAAAGGATTTGAAATTCAGATGGCGGGTAAGCATGAGATCGAAGGT

Protein sequence

TFPSRIHCNQSISSKNITFKSTFQGMGSNLTPFKFILTTKPKAPSLFWNPERIVFHETVSGTCKFSKTLKAISSCPDLQDTATGLQGEGQSKLIGIPIKTPPNLLLEKAKGLKCFAPASDRVRGGWQRLNLEEDFDQTGGGHVEAWGSLFGDDMKGFEIQMAGKHEIEG
Homology
[Close]
BLAST of MS003751 vs. ExPASy TrEMBL
Match: A0A0A0LTR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G320870 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.0e-48
Identity = 108/168 (64.29%), Postives = 123/168 (73.21%), Query Frame = 0 

Query: 2   FPSRIHCNQSISSKNITFKSTFQGMGSNLTPFKFILTTKPKAPSLFWNPERIVFHETVSG 61
           FPS IHCNQSIS+KNITF+STFQG             TK KA SLF NPERIVFHET+SG
Sbjct: 2   FPSPIHCNQSISNKNITFESTFQG------------KTKLKAFSLFSNPERIVFHETISG 61

Query: 62  TCKFSKTLKAISSCPDLQDTATGLQGEGQSKLIGIPIKTPPNLLLEKAKGLKCFAPA--- 121
           +CKFS TLKA+SS PDLQ  ATG Q + QS+LIGI IKTP  ++L+K KGLKC +     
Sbjct: 62  SCKFSNTLKALSSSPDLQKPATGFQSKNQSELIGITIKTPLKIVLKKVKGLKCSSGQVID 121

Query: 122 SDRVRGGWQRLNLEEDFDQTGGGHVEAWGSLFGDDMKGFEIQMAGKHE 167
            + V  GW   +LEE+FD+TG GHVE W SLFG DMKGFEIQMAGKHE
Sbjct: 122 QNAVERGW---HLEEEFDETGCGHVETWESLFGFDMKGFEIQMAGKHE 154

The following BLAST results are available for this feature:
BLAST of MS003751 vs.
Match NameE-valueIdentityDescription
BLAST of MS003751 vs.
Match NameE-valueIdentityDescription
BLAST of MS003751 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTR71.0e-4864.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G320870 PE=4 SV=1[more]
BLAST of MS003751 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS003751.1MS003751.1mRNA