MS003643 (gene) Bitter gourd (TR) v1

Overview
NameMS003643
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionB3 domain-containing protein
Locationscaffold963: 476743 .. 477437 (-)
RNA-Seq ExpressionMS003643
SyntenyMS003643
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGACATGTACAACTCCGACCATAAGTCCCTCCACCACCGTCCTCCGGCCAGCCCCCGAATCTCCTTCTCCAGCGACTTCGTCGATCTCCAGCAGACCCGAACCGCCATCCCCACCGCTGCCACCTCGTCCCCGTCCCCGCCCGTGTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCGATGATGCCCGCCGACGAGCTCTTCTTTGAGGGCCGCCTTCTCCCCTTCAAGGACTCCCACTCCCACCACCACCCCTTCCATCGGCCCACCACTCTCCGCGACGAGCTTCTTCTCGAGGACGAGGACGAGGAAGAGGAAGACGACGACATCTCCCGCCGCCCCTCCAAGGGCCGGTGGAAGGGCTTCCTCGGCTTGAAAAAGTCCCACAATGCCACCAAGAAGGGCTACCAAAACGACGGCTCAAGTGGCGGCAGTGGTGGCAGCGACACCGTGGCTGACGGTAAAAGGCCGTTCGGTTGGACCACGTCACATGCCACCAAACCCAATTCATCCCAGGTTAGTTTCGATAAGAACTGTTGGATACAAATTTCAAAATAACCTTCGATATCGAGATATCTTAACTATTCAACTATGTTCATGTTAGTAATCGAAAGCTTATTTTAACGACTCGTCTCCTTTTTCAGTTAGAAAACGAAGGAGGGCCGAGTTGCAAAGACGTGGAGATTGATTTC

mRNA sequence

TTAGACATGTACAACTCCGACCATAAGTCCCTCCACCACCGTCCTCCGGCCAGCCCCCGAATCTCCTTCTCCAGCGACTTCGTCGATCTCCAGCAGACCCGAACCGCCATCCCCACCGCTGCCACCTCGTCCCCGTCCCCGCCCGTGTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCGATGATGCCCGCCGACGAGCTCTTCTTTGAGGGCCGCCTTCTCCCCTTCAAGGACTCCCACTCCCACCACCACCCCTTCCATCGGCCCACCACTCTCCGCGACGAGCTTCTTCTCGAGGACGAGGACGAGGAAGAGGAAGACGACGACATCTCCCGCCGCCCCTCCAAGGGCCGGTGGAAGGGCTTCCTCGGCTTGAAAAAGTCCCACAATGCCACCAAGAAGGGCTACCAAAACGACGGCTCAAGTGGCGGCAGTGGTGGCAGCGACACCGTGGCTGACGGTAAAAGGCCGTTCGGTTGGACCACGTCACATGCCACCAAACCCAATTCATCCCAGGTTAAAAACGAAGGAGGGCCGAGTTGCAAAGACGTGGAGATTGATTTC

Coding sequence (CDS)

TTAGACATGTACAACTCCGACCATAAGTCCCTCCACCACCGTCCTCCGGCCAGCCCCCGAATCTCCTTCTCCAGCGACTTCGTCGATCTCCAGCAGACCCGAACCGCCATCCCCACCGCTGCCACCTCGTCCCCGTCCCCGCCCGTGTCCTCCGATTTCGAATTCTCCGTCTCCAACTACTCGATGATGCCCGCCGACGAGCTCTTCTTTGAGGGCCGCCTTCTCCCCTTCAAGGACTCCCACTCCCACCACCACCCCTTCCATCGGCCCACCACTCTCCGCGACGAGCTTCTTCTCGAGGACGAGGACGAGGAAGAGGAAGACGACGACATCTCCCGCCGCCCCTCCAAGGGCCGGTGGAAGGGCTTCCTCGGCTTGAAAAAGTCCCACAATGCCACCAAGAAGGGCTACCAAAACGACGGCTCAAGTGGCGGCAGTGGTGGCAGCGACACCGTGGCTGACGGTAAAAGGCCGTTCGGTTGGACCACGTCACATGCCACCAAACCCAATTCATCCCAGGTTAAAAACGAAGGAGGGCCGAGTTGCAAAGACGTGGAGATTGATTTC

Protein sequence

LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGRWKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSCKDVEIDF
Homology
BLAST of MS003643 vs. NCBI nr
Match: XP_022149537.1 (uncharacterized protein LOC111017947 [Momordica charantia])

HSP 1 Score: 376.3 bits (965), Expect = 1.5e-100
Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0

Query: 3   MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSM 62
           MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSM
Sbjct: 1   MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSM 60

Query: 63  MPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGRWKG 122
           MPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGRWKG
Sbjct: 61  MPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGRWKG 120

Query: 123 FLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSC 182
           FLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQ++NEGGPSC
Sbjct: 121 FLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQLENEGGPSC 180

Query: 183 KDVEIDF 190
           KDVEIDF
Sbjct: 181 KDVEIDF 187

BLAST of MS003643 vs. NCBI nr
Match: XP_022928078.1 (uncharacterized protein LOC111434969 [Cucurbita moschata] >XP_022954346.1 uncharacterized protein LOC111456619 [Cucurbita moschata] >KAG6571431.1 hypothetical protein SDJN03_30346, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.8 bits (556), Expect = 4.1e-53
Identity = 120/189 (63.49%), Postives = 139/189 (73.54%), Query Frame = 0

Query: 1   LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNY 60
           LDMYNSDHKSLHHR PASPRISFSSDFVD+QQ+       + ++P P  SSDFEFSVSNY
Sbjct: 4   LDMYNSDHKSLHHRAPASPRISFSSDFVDIQQSLKRQEQRSCAAPGPVSSSDFEFSVSNY 63

Query: 61  SMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEE-EEDDDISRRPSKGR 120
           SMM ADELFFEGRLLPFKDSH         TTLRDELL+E+E+EE EE++D+S+RPS+G 
Sbjct: 64  SMMTADELFFEGRLLPFKDSH------RAATTLRDELLVEEEEEEDEEENDVSQRPSRGS 123

Query: 121 WKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGG 180
           WKGFLGLKKS NA+KK                 + GKR  GW+ S +T  NSSQV+NEGG
Sbjct: 124 WKGFLGLKKSQNASKK----------------ASGGKRSLGWSPSPSTTANSSQVQNEGG 170

Query: 181 PSCKDVEID 189
            SCKDVEI+
Sbjct: 184 SSCKDVEIE 170

BLAST of MS003643 vs. NCBI nr
Match: XP_023513000.1 (uncharacterized protein LOC111777572 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-52
Identity = 119/188 (63.30%), Postives = 137/188 (72.87%), Query Frame = 0

Query: 1   LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNY 60
           LDMYNSDHKSLHHR PASPRISFSSDFVD+QQ+       + ++P P  SSDFEFSVSNY
Sbjct: 4   LDMYNSDHKSLHHRAPASPRISFSSDFVDIQQSLKRQEQRSCAAPCPVSSSDFEFSVSNY 63

Query: 61  SMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGRW 120
           SMM ADELFFEGRLLPFKDSH         TTLRDELL+E E+E+EE++D+S+RPS+G W
Sbjct: 64  SMMTADELFFEGRLLPFKDSH------RAATTLRDELLVE-EEEDEEENDVSQRPSRGSW 123

Query: 121 KGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGP 180
           KGFLGLKKS NA+KK                V+ GKR  GW+ S  T  NSSQV+N GG 
Sbjct: 124 KGFLGLKKSENASKK----------------VSSGKRSLGWSASPRTNANSSQVQNGGGS 168

Query: 181 SCKDVEID 189
           SCKDVEI+
Sbjct: 184 SCKDVEIE 168

BLAST of MS003643 vs. NCBI nr
Match: XP_008457833.1 (PREDICTED: uncharacterized protein LOC103497420 [Cucumis melo] >KAA0045816.1 uncharacterized protein E6C27_scaffold243G003410 [Cucumis melo var. makuwa] >TYJ99465.1 uncharacterized protein E5676_scaffold123G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 211.8 bits (538), Expect = 5.0e-51
Identity = 130/200 (65.00%), Postives = 154/200 (77.00%), Query Frame = 0

Query: 1   LDMYNSDHKSLHHRPPA-SPRISFSSDFVDLQQTRTAIPTAATSSPSPPV--SSDFEFSV 60
           LDMYNSDHKSLH R PA SPRISFSSDFVD+QQ   ++      S +PPV  SSDFEFSV
Sbjct: 4   LDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQ---SLKYQEQRSAAPPVSSSSDFEFSV 63

Query: 61  SNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDE--DEEEEDDDISRRP 120
           SNY+MM ADELFFEGRLLP+KDS+         TTLR+ELL+E+E  D+E+++DD S+RP
Sbjct: 64  SNYNMMTADELFFEGRLLPYKDSN------RTVTTLREELLVEEEEGDDEDDNDDASQRP 123

Query: 121 SK--GRWKGFLGLKKSH--NATKKGYQNDGSSGGSGGSDTVADGKRPFGW-TTSHATKPN 180
           +   GRWKGFLGLKKSH  NA+KKG +NDGSS    GS  V+ GKRPFGW ++S +T+ N
Sbjct: 124 TSRPGRWKGFLGLKKSHNNNASKKGCRNDGSS----GSRDVSGGKRPFGWSSSSSSTRAN 183

Query: 181 SS-QVKNEGGPSCKDVEIDF 190
           SS QV+NEGG SCKDVEIDF
Sbjct: 184 SSQQVQNEGGSSCKDVEIDF 190

BLAST of MS003643 vs. NCBI nr
Match: XP_022971706.1 (uncharacterized protein LOC111470374 [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 2.5e-50
Identity = 115/188 (61.17%), Postives = 136/188 (72.34%), Query Frame = 0

Query: 1   LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNY 60
           L+MYNSDHKSLHHR PASPRISFSSDFVD+QQ+       + ++P P  SSDFEFSVSNY
Sbjct: 4   LEMYNSDHKSLHHRAPASPRISFSSDFVDIQQSLKRQEQRSCAAPGPVSSSDFEFSVSNY 63

Query: 61  SMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGRW 120
           SMM ADELFFEGRLLPFKDSH         TTLRDELL+E E+E+EE++D+S+RPS+G W
Sbjct: 64  SMMTADELFFEGRLLPFKDSH------RAATTLRDELLVE-EEEDEEENDVSQRPSRGSW 123

Query: 121 KGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGP 180
           KGFLGLKKS NA+KK                 + GKR  GW+ S +T  NSSQV+N G  
Sbjct: 124 KGFLGLKKSQNASKK----------------ASSGKRSLGWSASASTTANSSQVQNGGES 168

Query: 181 SCKDVEID 189
           SCKD+EI+
Sbjct: 184 SCKDMEIE 168

BLAST of MS003643 vs. ExPASy TrEMBL
Match: A0A6J1D890 (uncharacterized protein LOC111017947 OS=Momordica charantia OX=3673 GN=LOC111017947 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 7.4e-101
Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0

Query: 3   MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSM 62
           MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSM
Sbjct: 1   MYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSM 60

Query: 63  MPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGRWKG 122
           MPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGRWKG
Sbjct: 61  MPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGRWKG 120

Query: 123 FLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGPSC 182
           FLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQ++NEGGPSC
Sbjct: 121 FLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQLENEGGPSC 180

Query: 183 KDVEIDF 190
           KDVEIDF
Sbjct: 181 KDVEIDF 187

BLAST of MS003643 vs. ExPASy TrEMBL
Match: A0A6J1EMU8 (uncharacterized protein LOC111434969 OS=Cucurbita moschata OX=3662 GN=LOC111434969 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 2.0e-53
Identity = 120/189 (63.49%), Postives = 139/189 (73.54%), Query Frame = 0

Query: 1   LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNY 60
           LDMYNSDHKSLHHR PASPRISFSSDFVD+QQ+       + ++P P  SSDFEFSVSNY
Sbjct: 4   LDMYNSDHKSLHHRAPASPRISFSSDFVDIQQSLKRQEQRSCAAPGPVSSSDFEFSVSNY 63

Query: 61  SMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEE-EEDDDISRRPSKGR 120
           SMM ADELFFEGRLLPFKDSH         TTLRDELL+E+E+EE EE++D+S+RPS+G 
Sbjct: 64  SMMTADELFFEGRLLPFKDSH------RAATTLRDELLVEEEEEEDEEENDVSQRPSRGS 123

Query: 121 WKGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGG 180
           WKGFLGLKKS NA+KK                 + GKR  GW+ S +T  NSSQV+NEGG
Sbjct: 124 WKGFLGLKKSQNASKK----------------ASGGKRSLGWSPSPSTTANSSQVQNEGG 170

Query: 181 PSCKDVEID 189
            SCKDVEI+
Sbjct: 184 SSCKDVEIE 170

BLAST of MS003643 vs. ExPASy TrEMBL
Match: A0A5A7TUK7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00280 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.4e-51
Identity = 130/200 (65.00%), Postives = 154/200 (77.00%), Query Frame = 0

Query: 1   LDMYNSDHKSLHHRPPA-SPRISFSSDFVDLQQTRTAIPTAATSSPSPPV--SSDFEFSV 60
           LDMYNSDHKSLH R PA SPRISFSSDFVD+QQ   ++      S +PPV  SSDFEFSV
Sbjct: 4   LDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQ---SLKYQEQRSAAPPVSSSSDFEFSV 63

Query: 61  SNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDE--DEEEEDDDISRRP 120
           SNY+MM ADELFFEGRLLP+KDS+         TTLR+ELL+E+E  D+E+++DD S+RP
Sbjct: 64  SNYNMMTADELFFEGRLLPYKDSN------RTVTTLREELLVEEEEGDDEDDNDDASQRP 123

Query: 121 SK--GRWKGFLGLKKSH--NATKKGYQNDGSSGGSGGSDTVADGKRPFGW-TTSHATKPN 180
           +   GRWKGFLGLKKSH  NA+KKG +NDGSS    GS  V+ GKRPFGW ++S +T+ N
Sbjct: 124 TSRPGRWKGFLGLKKSHNNNASKKGCRNDGSS----GSRDVSGGKRPFGWSSSSSSTRAN 183

Query: 181 SS-QVKNEGGPSCKDVEIDF 190
           SS QV+NEGG SCKDVEIDF
Sbjct: 184 SSQQVQNEGGSSCKDVEIDF 190

BLAST of MS003643 vs. ExPASy TrEMBL
Match: A0A1S3C600 (uncharacterized protein LOC103497420 OS=Cucumis melo OX=3656 GN=LOC103497420 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.4e-51
Identity = 130/200 (65.00%), Postives = 154/200 (77.00%), Query Frame = 0

Query: 1   LDMYNSDHKSLHHRPPA-SPRISFSSDFVDLQQTRTAIPTAATSSPSPPV--SSDFEFSV 60
           LDMYNSDHKSLH R PA SPRISFSSDFVD+QQ   ++      S +PPV  SSDFEFSV
Sbjct: 4   LDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQ---SLKYQEQRSAAPPVSSSSDFEFSV 63

Query: 61  SNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDE--DEEEEDDDISRRP 120
           SNY+MM ADELFFEGRLLP+KDS+         TTLR+ELL+E+E  D+E+++DD S+RP
Sbjct: 64  SNYNMMTADELFFEGRLLPYKDSN------RTVTTLREELLVEEEEGDDEDDNDDASQRP 123

Query: 121 SK--GRWKGFLGLKKSH--NATKKGYQNDGSSGGSGGSDTVADGKRPFGW-TTSHATKPN 180
           +   GRWKGFLGLKKSH  NA+KKG +NDGSS    GS  V+ GKRPFGW ++S +T+ N
Sbjct: 124 TSRPGRWKGFLGLKKSHNNNASKKGCRNDGSS----GSRDVSGGKRPFGWSSSSSSTRAN 183

Query: 181 SS-QVKNEGGPSCKDVEIDF 190
           SS QV+NEGG SCKDVEIDF
Sbjct: 184 SSQQVQNEGGSSCKDVEIDF 190

BLAST of MS003643 vs. ExPASy TrEMBL
Match: A0A6J1I403 (uncharacterized protein LOC111470374 OS=Cucurbita maxima OX=3661 GN=LOC111470374 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.2e-50
Identity = 115/188 (61.17%), Postives = 136/188 (72.34%), Query Frame = 0

Query: 1   LDMYNSDHKSLHHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNY 60
           L+MYNSDHKSLHHR PASPRISFSSDFVD+QQ+       + ++P P  SSDFEFSVSNY
Sbjct: 4   LEMYNSDHKSLHHRAPASPRISFSSDFVDIQQSLKRQEQRSCAAPGPVSSSDFEFSVSNY 63

Query: 61  SMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGRW 120
           SMM ADELFFEGRLLPFKDSH         TTLRDELL+E E+E+EE++D+S+RPS+G W
Sbjct: 64  SMMTADELFFEGRLLPFKDSH------RAATTLRDELLVE-EEEDEEENDVSQRPSRGSW 123

Query: 121 KGFLGLKKSHNATKKGYQNDGSSGGSGGSDTVADGKRPFGWTTSHATKPNSSQVKNEGGP 180
           KGFLGLKKS NA+KK                 + GKR  GW+ S +T  NSSQV+N G  
Sbjct: 124 KGFLGLKKSQNASKK----------------ASSGKRSLGWSASASTTANSSQVQNGGES 168

Query: 181 SCKDVEID 189
           SCKD+EI+
Sbjct: 184 SCKDMEIE 168

BLAST of MS003643 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 66/153 (43.14%), Postives = 90/153 (58.82%), Query Frame = 0

Query: 1   LDMYNSDHKSLHHRPPASPRISFSSDFVDLQ----QTRTAIPTAATSSPSPPVSSDFEFS 60
           L+MYNS+        P SPRISFS+DFV+++    +T  + P +     S   S +FEFS
Sbjct: 4   LEMYNSNGGG---GTPMSPRISFSNDFVEIRPETTKTTRSSPLSKQEGSSSSFSDNFEFS 63

Query: 61  VSNYSMMPADELFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDD------- 120
           VSNY+MMPADELF +G+LLPFK+++          TLR+ELL+E+++EE   D       
Sbjct: 64  VSNYTMMPADELFSKGKLLPFKETNQVQR------TLREELLVEEDEEEGPRDATNIFSL 123

Query: 121 --------DISRRPSKGRWKGFLGLKKSHNATK 135
                     S   SKGRWKG LGLK++H  +K
Sbjct: 124 KPPIFSSSSSSSSSSKGRWKGLLGLKRAHVGSK 147

BLAST of MS003643 vs. TAIR 10
Match: AT3G50640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits to 67 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-15
Identity = 54/137 (39.42%), Postives = 85/137 (62.04%), Query Frame = 0

Query: 11  LHHRPPASPRISFSSDFVDLQQTRTAIPT---AATSSPSPPVSSDFEFSVSNYSMMPADE 70
           +H+    + RISFS++FV+++  ++   +    + SS S P S+DF FSV++YSM+PADE
Sbjct: 6   MHNSMNGAARISFSNEFVEIRSEKSNAKSNNINSRSSFSMP-SADFAFSVTDYSMIPADE 65

Query: 71  LFFEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRP---------SKG 130
           +F +G++LPFK++ SH H      TL +ELL E+E    + +  S RP         +KG
Sbjct: 66  IFLKGKILPFKET-SHVH-----RTLGEELLTEEEGSMVDGNTFSLRPILLSSSSFSTKG 125

Query: 131 RWKGFLGLKKSHNATKK 136
            W+  LGLK++H  +KK
Sbjct: 126 TWRELLGLKRTHVRSKK 135

BLAST of MS003643 vs. TAIR 10
Match: AT4G34419.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19200.1). )

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-10
Identity = 51/127 (40.16%), Postives = 62/127 (48.82%), Query Frame = 0

Query: 12  HHRPPASPRISFSSDFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELFFE 71
           +H   A PRISFSS F   +        A      P  S DFEF V N+SM  ADE+FF+
Sbjct: 11  YHGSYAEPRISFSSGFAATKHEMIKYKEA------PVSSDDFEFGVENFSMTTADEIFFD 70

Query: 72  GRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEEDDDISRRPSKGR---WKGFLGL-- 131
           G +LP K+     +   R +TLR+EL        EED D  R  SKG    W+  LGL  
Sbjct: 71  GMILPLKE---EVNTTKRMSTLREEL-------SEEDGDSPRSKSKGSSGWWRERLGLAF 121

BLAST of MS003643 vs. TAIR 10
Match: AT5G19340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits to 906 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other Eukaryotes - 766 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 46/157 (29.30%), Postives = 62/157 (39.49%), Query Frame = 0

Query: 19  PRISFSS---------DFVDLQQTRTAIPTAATSSPSPPVSSDFEFSVSNYSMMPADELF 78
           PRISFS+         DF+ +      I        S   + DFEF   N +M+ ADELF
Sbjct: 19  PRISFSADLSSSDSDGDFICINPVMNLIVGREEKDKSSVKAGDFEFLSENATMLSADELF 78

Query: 79  FEGRLLPFKDSHSHHHPFHRPTTLRDELLLEDEDEEEE---------------------- 134
            EG+LLPF      H    +  TL+ ++ ++ E+E+ +                      
Sbjct: 79  SEGKLLPF--WQVKHSEKLKNVTLKPKVEVQQEEEDHKVVNEEGFVHNKEQENNNNNNNN 138

BLAST of MS003643 vs. TAIR 10
Match: AT3G05980.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 8.3e-04
Identity = 51/150 (34.00%), Postives = 60/150 (40.00%), Query Frame = 0

Query: 15  PPASPRISFSSDFVDLQQTRTAIPTAATSS--PSPPVSSDFEF----SVSNYSMMPADEL 74
           P   PRISFSSD  D        P              SDFEF    +VS   M+ ADEL
Sbjct: 13  PLLGPRISFSSDLSDGGDFICITPVMCKEDVVKGSVKVSDFEFLSSENVSPQRMLTADEL 72

Query: 75  FFEGRLLPF-KDSHSHHHPFHRPTTLRDELLLEDEDEEEE-------------------- 132
           F EG+LLPF +  HS          L++  L  +E+EE E                    
Sbjct: 73  FSEGKLLPFWQVKHSE--------KLKNITLKTNEEEEAEKRKVEVKKKDQEINNRDNRV 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149537.11.5e-10098.93uncharacterized protein LOC111017947 [Momordica charantia][more]
XP_022928078.14.1e-5363.49uncharacterized protein LOC111434969 [Cucurbita moschata] >XP_022954346.1 unchar... [more]
XP_023513000.12.6e-5263.30uncharacterized protein LOC111777572 [Cucurbita pepo subsp. pepo][more]
XP_008457833.15.0e-5165.00PREDICTED: uncharacterized protein LOC103497420 [Cucumis melo] >KAA0045816.1 unc... [more]
XP_022971706.12.5e-5061.17uncharacterized protein LOC111470374 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D8907.4e-10198.93uncharacterized protein LOC111017947 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1EMU82.0e-5363.49uncharacterized protein LOC111434969 OS=Cucurbita moschata OX=3662 GN=LOC1114349... [more]
A0A5A7TUK72.4e-5165.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C6002.4e-5165.00uncharacterized protein LOC103497420 OS=Cucumis melo OX=3656 GN=LOC103497420 PE=... [more]
A0A6J1I4031.2e-5061.17uncharacterized protein LOC111470374 OS=Cucurbita maxima OX=3661 GN=LOC111470374... [more]
Match NameE-valueIdentityDescription
AT5G66800.11.2e-2143.14unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G50640.12.1e-1539.42unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G34419.12.7e-1040.16unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G19340.11.7e-0429.30unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G05980.18.3e-0434.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..178
NoneNo IPR availablePANTHERPTHR31722:SF62EMB|CAB62433.1|coord: 10..150
NoneNo IPR availablePANTHERPTHR31722OS06G0675200 PROTEINcoord: 10..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS003643.1MS003643.1mRNA