MS003613 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCCTCACTCCTCTTCTTCTTCGCCGGCGGTCAAGCCATGGAACAGGGCCGTGGCGCCGCTGCCGCCGACTCCGCCGCAGGTTTACAAGGTGAACCCCGTCGACTTTCGGGACGTGGTCCAGAAGCTAACTGCGGCGCCCGAGTTCCAGGACCGCCGCCTCCAAGCCATGCCTGCCCCCCGCCCCAGCCCGCCCCCGGGTTCCGCCGCTCGCACGGATTTTTCTGGCGAGGGGGCTGTTTTTTACTATGGGTATCCTGGAGTTGGATTCTCTGAAAGATAT ATGGAGCCTCACTCCTCTTCTTCTTCGCCGGCGGTCAAGCCATGGAACAGGGCCGTGGCGCCGCTGCCGCCGACTCCGCCGCAGGTTTACAAGGTGAACCCCGTCGACTTTCGGGACGTGGTCCAGAAGCTAACTGCGGCGCCCGAGTTCCAGGACCGCCGCCTCCAAGCCATGCCTGCCCCCCGCCCCAGCCCGCCCCCGGGTTCCGCCGCTCGCACGGATTTTTCTGGCGAGGGGGCTGTTTTTTACTATGGGTATCCTGGAGTTGGATTCTCTGAAAGATAT ATGGAGCCTCACTCCTCTTCTTCTTCGCCGGCGGTCAAGCCATGGAACAGGGCCGTGGCGCCGCTGCCGCCGACTCCGCCGCAGGTTTACAAGGTGAACCCCGTCGACTTTCGGGACGTGGTCCAGAAGCTAACTGCGGCGCCCGAGTTCCAGGACCGCCGCCTCCAAGCCATGCCTGCCCCCCGCCCCAGCCCGCCCCCGGGTTCCGCCGCTCGCACGGATTTTTCTGGCGAGGGGGCTGTTTTTTACTATGGGTATCCTGGAGTTGGATTCTCTGAAAGATAT MEPHSSSSSPAVKPWNRAVAPLPPTPPQVYKVNPVDFRDVVQKLTAAPEFQDRRLQAMPAPRPSPPPGSAARTDFSGEGAVFYYGYPGVGFSERY Homology
BLAST of MS003613 vs. NCBI nr
Match: XP_022149539.1 (VQ motif-containing protein 29 [Momordica charantia]) HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44 Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of MS003613 vs. NCBI nr
Match: KAA0045761.1 (VQ motif-containing protein 29 [Cucumis melo var. makuwa] >TYJ99521.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16 Identity = 60/104 (57.69%), Postives = 68/104 (65.38%), Query Frame = 0
BLAST of MS003613 vs. NCBI nr
Match: KAE8651906.1 (hypothetical protein Csa_006780 [Cucumis sativus]) HSP 1 Score: 92.4 bits (228), Expect = 2.2e-15 Identity = 51/85 (60.00%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of MS003613 vs. NCBI nr
Match: KAA8522582.1 (hypothetical protein F0562_013057 [Nyssa sinensis]) HSP 1 Score: 85.9 bits (211), Expect = 2.1e-13 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of MS003613 vs. NCBI nr
Match: KAG6605217.1 (hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 79.0 bits (193), Expect = 2.5e-11 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of MS003613 vs. ExPASy TrEMBL
Match: A0A6J1D7B4 (VQ motif-containing protein 29 OS=Momordica charantia OX=3673 GN=LOC111017949 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.4e-45 Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of MS003613 vs. ExPASy TrEMBL
Match: A0A5A7TW54 (VQ motif-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00880 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.7e-17 Identity = 60/104 (57.69%), Postives = 68/104 (65.38%), Query Frame = 0
BLAST of MS003613 vs. ExPASy TrEMBL
Match: A0A0A0LPS3 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G271490 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.4e-14 Identity = 45/71 (63.38%), Postives = 53/71 (74.65%), Query Frame = 0
BLAST of MS003613 vs. ExPASy TrEMBL
Match: A0A5J4ZYQ3 (VQ domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_013057 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.0e-13 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of MS003613 vs. ExPASy TrEMBL
Match: A0A7J7DLN8 (VQ domain-containing protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW05G00002 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.1e-11 Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of MS003613 vs. TAIR 10
Match: AT4G37710.1 (VQ motif-containing protein ) HSP 1 Score: 41.2 bits (95), Expect = 5.4e-04 Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|