MS003468 (gene) Bitter gourd (TR) v1

Overview


Name	MS003468
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	COP9 signalosome complex subunit 3
Location	scaffold234: 2993960 .. 2999702 (-)
RNA-Seq Expression	MS003468
Synteny	MS003468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCACGGTTGAAGTTCTCGTGGCTCAAATCCAAGGGTTGTCCAGTACGGCCGGCGATATCTCACGCCTCCACACTCTTCTCAAGCAATCAGAAGAACTGCTTCACACCGACACCGCTTCTTTACCTTCCGCATTGGCTCAACTTGATGCTTCCAAACACTCTCTAGGATATCTCTACGTTCTGTAAGTTTTTCTTCTCTCAACTATTCTATCTGTATTCTGGTTCTTTAGGCTAATTAGGGTCCCGCCTGCTACCATGTATATCACGCCACTATCAAGATTTATTCCTGCCAGTAGGAAATTGTGTTGGACGATCATTTCCTTTGGTAAAATTTTGAAGCGACGGAGTTAAAGAATTGGCGTTTGATGGGTTGGATTTTGTTAGGATAACACTCATCTTGGATACGACTTCTAATGGCCGCGACATCCTATGTTCAGATTATTCTAGGCCTTGATTTTGAGTATATGGTTGGAGCAGTAATGGGAATGCATCTGATTAAATCCTTTACCATTTTCATTACTGAATATGTGCGCAGAGGAGATTGATCTATTATCTATAATATCTTCTTGAAATAATTCGCAGAGAGGCATGCACGTCCGGACCAATTTCACAAGAGCAATCCAGTTCAACTGTTCTGACTATTTCAAGATTTATCTCTTCTTGCAACCCAGAGCAGATTCGCTTAGCACCTGAAAAATGTAATCATCGTGAACTTTAAACGTTATTATTATTAACAGATGGGAGTTCTGCCGTCTGGATTTTCCACAATCTATTATCACATTCTGCTGATTGTGCAGTCGTCTCTGTTTGCAAGAGGCTCAAAGAACAAGTTTTGCTACTTGAGGCTCCATTAAGAGGAGTGGCTCCACTTCTTACTGCTATTAGAAAACTCCAGACCTCCTCAGAACACTTAACTACTTTACATCCGGAGTTTCTTCTTCTTTGCGTATTAGCAAAGTGCTACAAAGCTGGCAGATCCATTTTGGATAATGATATTCTCGAGGTTGATCAACCGAGGGACCTGTTTCTTTATTGTTATTACGGGTGAGTTGCTTGTCTTCTTCACGTTAAGCTCTTAAATGATGTATTTCTTTCATCATTACAGTATCGCATCAGTGTTATCCAATTGGAGAGGATTTTTGTAACTCCCACGGATAGGGATTTTCTCCTCCTTTTGTTTTCTTAATTTCATATATCAATGAAATCGTTTCCTTAAAAAAAAAAAATTAAAAAAATAAATGGTGTATTTCTCATTCTTTGATTAATATTTTCTTGCCTGAGATGCATTTTATTATCTTCATGTACTCAGTCAACCTTTTTAGTCCTGCCTATGTTATTCCTCGAAGTTTTGGTGGTTCCTGTTAAAGCCTAGTACTTTGTGGTATAAGACTATAGTGAGCGAGTTAATACCGGTGACATCGTGCTAATTGGAATATGACTATAATGACGTAAGGAACTTTGAGGTACTCATGAAAGTCTATTTTTGGCGTCTCCCTTGCTTTTCCAAATTCTGGAACCTCATCCATAGCACTTTTGGTTGGTACACTGCTCTGCCAACGGATCCCCCTCTCCTCATTAAAGCTACTCTAACCGGACACCCATTTTAGAGAAAGCTCTTCTTCGGCAGAACTTTATGCGTGCTTTCCTTTGGGTCACTTGGAGAGAACGCAACCAACGCATCTTCAGCGACAAAACTCTCCCTTTTGAAAATTTTTTTTGAAGCTATAGTCTTTACAGTCATTACTTAGTGTAAATCCTCCCCTATGTTTCACAACTATAGCTACACTTCCCTTTTAGCCAATTGGGAGTGCTTCATGTAATCGTCCTTTAAGGCTTTTGTAATTTCATACATCAATAAAATTGTTTCTTTCATAAAAAAAAGAAGTTTACCTTTGGAGAGGGATCCTAAGGAAGGGTTATTAGCTAGGTGATGGTCTTATTGATTGCTTTTCCCATCCCTGTAACCTTCCCTATGAGAAAGGAACATTCATTGCCTTAGTCCTCTCTTTGTCTGGGAGTTCTACTTCATATGACTTTCACTTTAAGATGTCTTTTTCTGATACAGAAGCTCTTGAGTTGTCCTATCTACTTTCCCTTCTGCATGTTTATCTTTGCATGAGGTATATGTGTTTGGACCCTCAACTTTTCTGGAGTGTTTTATTGTCAATATTTTCTCATTGGTTTCTCATAAAATATATAAAATAAGGCCTCTAGAGACTTCATTTATAAAATTATTTAACTGTCCTATTAAAGACATTTATTTAATTGGGAAGCAATAAATTTTGTTTAACAAGCTCGTTGTAAGTTGTGACAAATCTATCATCTTCTGAATGACATTGTCCTTTTAATAAAATGTGATACACGATTTAGTTTTATGTGATCATCCATACGCTGAGATTCAATTTTGTCTTTCTCCATAAATAGGGATTCTCTGACGATATCTTTCTTATGATAATGTGACAGGGGGATGATATGCATAGGACTAAAGCTATTTCATAAAGCGCTTGAGCTTCTTCATAATGTTCACCATCTAAATGGAACTCTTTCCTTTTATATTATTGATATTGATTTATTTAACATGCTTCTGGATGATCTGAAAACCACTATCCTTATTTTGTTACAGGTTGTAACTGCTCCGATGCCAACAATAAATGCTATAGCTGTTGAAGCATACAAAAAATACATTTTGGTCTCACTCATTTACAATGGACAAGTATGCTATTCTTTATATATGCTTTATTATTAGTTTGTATTATTGGTTCTAAGGCCTTGAATATTTGGAAATGTGAAATGAATATCTGGACGTTGGTTCTTGCTTCTTACATATATACAATAGTTGTACAGTTGTCAGATCTTAGCATTACTAAATATTCTTGTGTCTCATGCTTTATGTTTTGGCTTTCTATGGCTCTGCTGTCTCCATATTTGGCACCTTTCTGTTGGCAACTGTTACCTAGAAACATGCTACTACAGTAAAAGTGAGATTTTCCATCAAGGAGGAGGTGGCCACAAGTAATTATGCACTCAACAAGGATGTAATGTGTGATCATTGTTGGATTTTGACTAATGGAGCAAATTAACTTGGATTTTCATATCATAGAATTTTTAACTTAACAGTGCTTATCTGCATAGTGGTTCTTGTTGCTTTTTTATTTGCTCATATTCTTTACAGCTTTAAATCACTTTGTAAGCTTATGTGTTCCTATGATGTTATGGAGACTAATATGCATATACATGCATTTGGTGGCAGTTTTCAACCAGTCTCCCGAAGTACACTTCTTCAGTAGCTCAGAGAAATTTAAAAAACTTCTGTCAGGTATTGTAAATTGAAGTACATCTCTTCTTTCATGGACAGATTAAGTATTTTGATACTAGGTTAATGTAATTCATTACATGAATATTACTTTTTTAATGTTTGATTTCAAGCTACTAATTTAGCAAAATCTCATTAAGTTTTGGCGAAAATGACTGTACCTCATTTTGAATGTGTAGGAATTATTGATCATTTTTGGGTTTAGTTATCAAATCCACAAATTAAGATCATTATTATTAATGCAATGATGAATCTGTATTTACTTGAAATTAGAAATTTGCTTTTAGGATAAGATTCCATATAGTAGTTTTCCTCCTTCAATGGTGAGTTTATTTATTTATTTATTTTTGATAAGAATCTGCACTTTTATTGAGAAGAATGAAAAAAAAAACAAGAAGGGCATACAAAAAAACAGCCCCAAAAGAGGGCACCCATTAAAGAAAAGGGGTTCCATCCAAAATAATATCTAATTGATAATTACAAAAGGCTTTAGAGACCGAAGCCCGCAAAGAAGTCTTAAACCTAACAAGGTCCCAAATAGAATCCAACGTCTTCTCCACCCCCCTAAAAATTCTATTGTTCCTCTCCAGCCAAATACCTCACAAAGTAGACAAAAAACCCACCTGCCACATGAACCGCCCCCTATCGCGAAAAGGAAGGGAAAGCAGCACCTCCTCCAAAAACACCCTAATATCCCTAGGAAGGGCTAGCTCTACCCCAAAACATTAAAAAAAACGAAGCACCATAACAAATGCTGGAGGTCTTCAGAGGCCCCTCTGCAAAGAACACACCACTGCGGCGTACTGGTGGGTTTATGTAGATGCATGAGCAATGCAGTTCTTTATTACAATCCTGAAAAATTGACAACCTAGCTCGAGAGACATGCTTCTAGATTGTATTTAGGTAGAGCACAATCCCGTTTCTGATTGTAGCAGCATTGCTGGAGAAAGTGAACAAATTGCTTTAGAGGTTTGGTGCTGGTCCCATTTGATATATTTTTGCAATCAAATTTTGCTGATGGAAACTGTGCATGAGGGCTGAAGGGAAAATGCATGAGCAGATTCAGTTGCCACAAGCCCCCCATAACTTCAGTAGACATTTTCTTTTCTGGATTGGGAGAGGGGGAGTTGGGAGAGGAGGCAGTGGCAGAGGTTACTCTACCCTTGACGATCAACCAGTTGTGTGTTTGGAAGTTATTTTTGCCAATTTACCCATGTAGCCGATGTGGTGCATTATCCCCATCCCCTCACTTTTGACCGTGACTGTAGCTATAAGAATACTTTTCCCCCTCCCTTTGTGATCCAAGTGATGTCTCCAAGCTACTTTGGTTTATTTATTGTCTGTTTCCTCTTTTACAGCCCTACATTGAATTGGCAAATAGTTATAGCACGGGAAATATTACCGAATTAGACACTGCTCTTCAAACAAACAAGGAGAAATTTGAAAGTGTAAGAATTCCTTTTTCATTTATTATCACTTCAGATGGTCTAATTAAGTGGTATATATATATGCAGAGAAGAGAACTTAGTTATTTAGATCTTGGTTTATGGATCTATAATCTGAATGATTTGGGGTCCTTGATATGAGGTATTGGTTTTTGTTATTACCAGGACAACAATCTTGGACTCGTGAATCAGGTTGTATCTTCTATGTATAAGCGCAACATTCAGAGATTAACACAGACGTACTTGACCCTCTCTCTCCAAGATATAGCCAATACTGTTAAACTCAACAGCCCAAAGGAAGCTGAAATGCATGTGCTACAAATGGTAATTTCAGGATCGCCGGATTAGTCTATTAATCTATTCATCAACCTCCATCTCTAGTAATATCAAAGTTTTGTACAATTTTAGATCCAGGACGGTGAGATTTTTGCAACAATTAATCAGAAAGATGGAATGGTCAGATTCCTTGAGGATTCTGAGCAGTACAAATCCAGCAAGATGATTGAGCATATTGACTCGTCAATCCGGAGGTATGATGTTTGGATTTGAACGATTGTAGTATGATGAAATGGATGTTGTTGGAGTTATTATATGAAAAAAACTACCTTATTTTGTAGAGCTTTGTGGCAAGATAAGCTGCATTGGCTCAGTTGCCATATTTATCGCGATTTATGACTAAACAGACGTCTGATATTGGTTATATGTACTTGGTTTTGGTCTGACCATACTTGATTGTTCTTTTCCCATCTTCCTCTGTTCATTACAGGATAATGACACTTGCGAAGAAATTGACTACTATGGATGAAAATATATCATCTGATCCTCTGTATTTGGCAAAGGTGAGCATCTCCAACTTAAAATTTCATTATACTAGTATATAAGTAGGTAACTAAAAGGTTTTTTTTCTTGTCTTCAGGCTGGAAGAGAGAGGCAGAGATTCGATTACGATGACTTTGACTCTGTTCCTCAAAAATTTAATATT

mRNA sequence

ATGGGCACGGTTGAAGTTCTCGTGGCTCAAATCCAAGGGTTGTCCAGTACGGCCGGCGATATCTCACGCCTCCACACTCTTCTCAAGCAATCAGAAGAACTGCTTCACACCGACACCGCTTCTTTACCTTCCGCATTGGCTCAACTTGATGCTTCCAAACACTCTCTAGGATATCTCTACGTTCTAGAGGCATGCACGTCCGGACCAATTTCACAAGAGCAATCCAGTTCAACTGTTCTGACTATTTCAAGATTTATCTCTTCTTGCAACCCAGAGCAGATTCGCTTAGCACCTGAAAAATTCGTCTCTGTTTGCAAGAGGCTCAAAGAACAAGTTTTGCTACTTGAGGCTCCATTAAGAGGAGTGGCTCCACTTCTTACTGCTATTAGAAAACTCCAGACCTCCTCAGAACACTTAACTACTTTACATCCGGAGTTTCTTCTTCTTTGCGTATTAGCAAAGTGCTACAAAGCTGGCAGATCCATTTTGGATAATGATATTCTCGAGGTTGATCAACCGAGGGACCTGTTTCTTTATTGTTATTACGGGGGGATGATATGCATAGGACTAAAGCTATTTCATAAAGCGCTTGAGCTTCTTCATAATGTTGTAACTGCTCCGATGCCAACAATAAATGCTATAGCTGTTGAAGCATACAAAAAATACATTTTGGTCTCACTCATTTACAATGGACAATTTTCAACCAGTCTCCCGAAGTACACTTCTTCAGTAGCTCAGAGAAATTTAAAAAACTTCTGTCAGCCCTACATTGAATTGGCAAATAGTTATAGCACGGGAAATATTACCGAATTAGACACTGCTCTTCAAACAAACAAGGAGAAATTTGAAAGTGACAACAATCTTGGACTCGTGAATCAGGTTGTATCTTCTATGTATAAGCGCAACATTCAGAGATTAACACAGACGTACTTGACCCTCTCTCTCCAAGATATAGCCAATACTGTTAAACTCAACAGCCCAAAGGAAGCTGAAATGCATGTGCTACAAATGATCCAGGACGGTGAGATTTTTGCAACAATTAATCAGAAAGATGGAATGGTCAGATTCCTTGAGGATTCTGAGCAGTACAAATCCAGCAAGATGATTGAGCATATTGACTCGTCAATCCGGAGGATAATGACACTTGCGAAGAAATTGACTACTATGGATGAAAATATATCATCTGATCCTCTGTATTTGGCAAAGGCTGGAAGAGAGAGGCAGAGATTCGATTACGATGACTTTGACTCTGTTCCTCAAAAATTTAATATT

Coding sequence (CDS)

ATGGGCACGGTTGAAGTTCTCGTGGCTCAAATCCAAGGGTTGTCCAGTACGGCCGGCGATATCTCACGCCTCCACACTCTTCTCAAGCAATCAGAAGAACTGCTTCACACCGACACCGCTTCTTTACCTTCCGCATTGGCTCAACTTGATGCTTCCAAACACTCTCTAGGATATCTCTACGTTCTAGAGGCATGCACGTCCGGACCAATTTCACAAGAGCAATCCAGTTCAACTGTTCTGACTATTTCAAGATTTATCTCTTCTTGCAACCCAGAGCAGATTCGCTTAGCACCTGAAAAATTCGTCTCTGTTTGCAAGAGGCTCAAAGAACAAGTTTTGCTACTTGAGGCTCCATTAAGAGGAGTGGCTCCACTTCTTACTGCTATTAGAAAACTCCAGACCTCCTCAGAACACTTAACTACTTTACATCCGGAGTTTCTTCTTCTTTGCGTATTAGCAAAGTGCTACAAAGCTGGCAGATCCATTTTGGATAATGATATTCTCGAGGTTGATCAACCGAGGGACCTGTTTCTTTATTGTTATTACGGGGGGATGATATGCATAGGACTAAAGCTATTTCATAAAGCGCTTGAGCTTCTTCATAATGTTGTAACTGCTCCGATGCCAACAATAAATGCTATAGCTGTTGAAGCATACAAAAAATACATTTTGGTCTCACTCATTTACAATGGACAATTTTCAACCAGTCTCCCGAAGTACACTTCTTCAGTAGCTCAGAGAAATTTAAAAAACTTCTGTCAGCCCTACATTGAATTGGCAAATAGTTATAGCACGGGAAATATTACCGAATTAGACACTGCTCTTCAAACAAACAAGGAGAAATTTGAAAGTGACAACAATCTTGGACTCGTGAATCAGGTTGTATCTTCTATGTATAAGCGCAACATTCAGAGATTAACACAGACGTACTTGACCCTCTCTCTCCAAGATATAGCCAATACTGTTAAACTCAACAGCCCAAAGGAAGCTGAAATGCATGTGCTACAAATGATCCAGGACGGTGAGATTTTTGCAACAATTAATCAGAAAGATGGAATGGTCAGATTCCTTGAGGATTCTGAGCAGTACAAATCCAGCAAGATGATTGAGCATATTGACTCGTCAATCCGGAGGATAATGACACTTGCGAAGAAATTGACTACTATGGATGAAAATATATCATCTGATCCTCTGTATTTGGCAAAGGCTGGAAGAGAGAGGCAGAGATTCGATTACGATGACTTTGACTCTGTTCCTCAAAAATTTAATATT

Protein sequence

MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLYVLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLRGVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYCYYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKYTSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYKRNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSEQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQKFNI

Homology

[Close]

BLAST of MS003468 vs. NCBI nr
Match: XP_022133687.1 (COP9 signalosome complex subunit 3 [Momordica charantia])

HSP 1 Score: 816.6 bits (2108), Expect = 9.9e-233
Identity = 422/424 (99.53%), Postives = 423/424 (99.76%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSAL QLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALTQLDASKHSLGYLY 60

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
           VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR
Sbjct: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC
Sbjct: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY
Sbjct: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
           TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK
Sbjct: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420
           EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ
Sbjct: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420

Query: 421 KFNI 425
           KFN+
Sbjct: 421 KFNV 424

[Close]

BLAST of MS003468 vs. NCBI nr
Match: XP_038886130.1 (COP9 signalosome complex subunit 3 [Benincasa hispida])

HSP 1 Score: 764.6 bits (1973), Expect = 4.5e-217
Identity = 393/424 (92.69%), Postives = 408/424 (96.23%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLSSTA DISRLHTLLKQSEELLH++T+ LPSALAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSSTAADISRLHTLLKQSEELLHSETSRLPSALAQLDASKHSLGYLY 60

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
           +LEACTS PISQEQSSS VLTISRFISSCNPEQIRLAPEKFVSVCKR K+QV +LEAP+R
Sbjct: 61  ILEACTSVPISQEQSSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRFKDQV-ILEAPIR 120

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GVAPLLTAIRKLQTSSEHLTTLHPEFLLLC+LAKCYK GRSILDNDILEVDQPRDLFLYC
Sbjct: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKTGRSILDNDILEVDQPRDLFLYC 180

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLKLFHKALELLHNVVTAPM ++NAIAVEAYKKYILVSLIYNGQFSTSLPKY
Sbjct: 181 YYGGMICIGLKLFHKALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQFSTSLPKY 240

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
           TSSVAQRNLKNFCQPYIELANSY TGN+ ELDT  QTN+EK+ESDNNLGLV Q VSSMYK
Sbjct: 241 TSSVAQRNLKNFCQPYIELANSYGTGNVEELDTVFQTNREKYESDNNLGLVKQAVSSMYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNIQRLTQTYLTLSLQDIA+TVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS
Sbjct: 301 RNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420
           EQYKS KMIEHIDSSI+RIMTLAKKLT MDENISSDPLYLAKAGRERQRFDYDDFDSVPQ
Sbjct: 361 EQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420

Query: 421 KFNI 425
           KFNI
Sbjct: 421 KFNI 423

[Close]

BLAST of MS003468 vs. NCBI nr
Match: XP_022992614.1 (COP9 signalosome complex subunit 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 753.8 bits (1945), Expect = 7.9e-214
Identity = 385/424 (90.80%), Postives = 406/424 (95.75%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           M TVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLH DTA LPSALAQLDAS+HSLGYL+
Sbjct: 1   MATVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHADTARLPSALAQLDASEHSLGYLF 60

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
           +LEACTS PISQ+QSSS +LTISRFISSCN +QIRLAPEKF SVCKR K+QV +LEAP+R
Sbjct: 61  ILEACTSVPISQDQSSSIILTISRFISSCNQDQIRLAPEKFASVCKRFKDQV-MLEAPIR 120

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GVAPLLTAIRKLQTSSEHLT+LHP+FLLLC+LAKCYK GRSILDNDILEVDQPRDLFLYC
Sbjct: 121 GVAPLLTAIRKLQTSSEHLTSLHPDFLLLCLLAKCYKTGRSILDNDILEVDQPRDLFLYC 180

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLKLFHKALELLHNVVTAPMP++NAIAVEAYKKYIL+SLIYNGQFS+SLPKY
Sbjct: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPSLNAIAVEAYKKYILLSLIYNGQFSSSLPKY 240

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
           TSSVAQRNLKNFCQPYIELANSY TGN+ ELDT  QTN+EKFESDNNLGLV Q VSS+YK
Sbjct: 241 TSSVAQRNLKNFCQPYIELANSYGTGNVDELDTVFQTNREKFESDNNLGLVKQAVSSLYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420
           EQYKS KMIE+IDSSI+RIMTLAKKLT MDENISSDPLYLAKAGRERQRFDYDDFDSVPQ
Sbjct: 361 EQYKSCKMIENIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420

Query: 421 KFNI 425
           KFNI
Sbjct: 421 KFNI 423

[Close]

BLAST of MS003468 vs. NCBI nr
Match: XP_008441368.1 (PREDICTED: COP9 signalosome complex subunit 3 isoform X1 [Cucumis melo] >KAA0056600.1 COP9 signalosome complex subunit 3 isoform X1 [Cucumis melo var. makuwa] >TYK24283.1 COP9 signalosome complex subunit 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 753.8 bits (1945), Expect = 7.9e-214
Identity = 387/424 (91.27%), Postives = 406/424 (95.75%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLS+TAGDISRLHTLLKQSEELLH +T+ LPSALAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSTTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
           +LEACTS PISQEQSSS +LTISRFISSCNPEQIRLAPEKFVSVCKR K+QV + EAP+R
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISSCNPEQIRLAPEKFVSVCKRFKDQV-IQEAPIR 120

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GVAPLLTA+RKLQTSSEHLTTLHPEFLLLC+LAK YK GRSILDNDILEVDQPRDLFLYC
Sbjct: 121 GVAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYC 180

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLKLF KALELLHNVVTAPM ++NAIAVEAYKKYILVSLIYNGQFSTSLPKY
Sbjct: 181 YYGGMICIGLKLFQKALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQFSTSLPKY 240

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
           TSSVAQRNLKNFCQPYIELANSYSTGN+ ELDT  QTN++KFESDNNLGLV Q VSSMYK
Sbjct: 241 TSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVKQAVSSMYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNIQRLTQTYLTLSLQDIA+TVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS
Sbjct: 301 RNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420
           EQYKS +MIEHIDSSI+RIMTL+KKLT MDENISSDPLYLAKAGRERQRFDYDDFDSVPQ
Sbjct: 361 EQYKSCRMIEHIDSSIQRIMTLSKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420

Query: 421 KFNI 425
           KFNI
Sbjct: 421 KFNI 423

[Close]

BLAST of MS003468 vs. NCBI nr
Match: KAG6578376.1 (COP9 signalosome complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 752.3 bits (1941), Expect = 2.3e-213
Identity = 385/424 (90.80%), Postives = 405/424 (95.52%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           M TVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLH DTA LPSALAQLDAS+HSLGYL+
Sbjct: 1   MATVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHADTARLPSALAQLDASEHSLGYLF 60

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
           +LEACTS PISQ+QSSS +LTISRFISSCN EQIRLAPEKF SVCKR K+QV +LEAP+R
Sbjct: 61  ILEACTSVPISQDQSSSIILTISRFISSCNQEQIRLAPEKFASVCKRFKDQV-MLEAPIR 120

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GVAPL TAIRKLQTSSEHLT+LHP+FLLLC+LAKCYK GRSILDNDILEVDQPRDLFLYC
Sbjct: 121 GVAPLHTAIRKLQTSSEHLTSLHPDFLLLCLLAKCYKTGRSILDNDILEVDQPRDLFLYC 180

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLKLFHKALELLHNVVTAPMP++NAIAVEAYKKYIL+SLIYNGQFS+SLPKY
Sbjct: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPSLNAIAVEAYKKYILLSLIYNGQFSSSLPKY 240

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
           TSSVAQRNLKNFCQPYIELANSY TGN+ ELDT  QTN+EKFESDNNLGLV Q VSS+YK
Sbjct: 241 TSSVAQRNLKNFCQPYIELANSYGTGNVDELDTVFQTNREKFESDNNLGLVKQAVSSLYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420
           EQYKS KMIE+IDSSI+RIMTLAKKLT MDENISSDPLYLAKAGRERQRFDYDDFDSVPQ
Sbjct: 361 EQYKSCKMIENIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420

Query: 421 KFNI 425
           KFNI
Sbjct: 421 KFNI 423

[Close]

BLAST of MS003468 vs. ExPASy Swiss-Prot
Match: Q8W575 (COP9 signalosome complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=CSN3 PE=1 SV=2)

HSP 1 Score: 513.8 bits (1322), Expect = 1.8e-144
Identity = 268/425 (63.06%), Postives = 329/425 (77.41%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           + +VE ++  IQGLS +  D+S LH LL+ +++ L  +     S L QLDASKHSLGYLY
Sbjct: 5   VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
            LE  T GP+S+E+++  +  I+RFI+SC+  QIRLA  KFVS+CK LK+ V+ L  PLR
Sbjct: 65  FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALGDPLR 124

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GV PLL A++KLQ SS+ LT LHP+ L LC+ AK YK+G SIL +DI+E+DQPRD FLY 
Sbjct: 125 GVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDFFLYS 184

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLK F KALELL+NVVTAPM  +NAIA+EAYKKYILVSLI+NGQF+ +LPK 
Sbjct: 185 YYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQFTNTLPKC 244

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
            S+ AQR+ KN+  PYIEL N Y+ G I EL+  +     +FE D NLGLV Q VSS+YK
Sbjct: 245 ASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVKQAVSSLYK 304

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNI RLTQ YLTLSLQDIAN V+L + KEAEMHVLQMIQDG+I A INQKDGMVRFLED 
Sbjct: 305 RNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKDGMVRFLEDP 364

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDY-DDFDSVP 420
           EQYKSS+MIE +DS I+R + L+K L  MDE++S DPLYL K GRERQR+D+ DDFD+VP
Sbjct: 365 EQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGKVGRERQRYDFGDDFDTVP 424

Query: 421 QKFNI 425
           QKF++
Sbjct: 425 QKFSM 429

[Close]

BLAST of MS003468 vs. ExPASy Swiss-Prot
Match: Q9UNS2 (COP9 signalosome complex subunit 3 OS=Homo sapiens OX=9606 GN=COPS3 PE=1 SV=3)

HSP 1 Score: 294.7 bits (753), Expect = 1.7e-78
Identity = 173/426 (40.61%), Postives = 258/426 (60.56%), Query Frame = 0


Query: 4   VEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLYVLE 63
           +E  V  ++ LS+  G +++L  L+ +S ELL  + + L + L  LD  +HSLG L VL 
Sbjct: 5   LEQFVNSVRQLSA-QGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  ACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLRGVA 123
              S P S     +    +  FIS+CN E IR A + F  +C +L   ++  + PLRG+ 
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIG 124

Query: 124 PLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQ------PRDLF 183
            L  AI K+Q ++  LT++H +   LC+LAKC+K     LD D++++ +       +   
Sbjct: 125 ILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFL 184

Query: 184 LYCYYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSL 243
            Y YYGGMI  GLK F +AL      +T P   ++ I +E+YKKYILVSLI  G+    L
Sbjct: 185 CYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQ-QL 244

Query: 244 PKYTSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSS 303
           PKYTS +  R +K     Y ELA  YST N +EL   +  + E F  DNN+GLV Q +SS
Sbjct: 245 PKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSS 304

Query: 304 MYKRNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFL 363
           +YK+NIQRLT+T+LTLSLQD+A+ V+L+ P+EAE +VL MI+DGEIFA+INQKDGMV F 
Sbjct: 305 LYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFH 364

Query: 364 EDSEQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDS 423
           ++ E+Y +  M+ +ID  + + + L ++L  MD+ I+ +P ++ K+   ++    DD  +
Sbjct: 365 DNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQE----DDSGN 423

[Close]

BLAST of MS003468 vs. ExPASy Swiss-Prot
Match: Q4R898 (COP9 signalosome complex subunit 3 OS=Macaca fascicularis OX=9541 GN=COPS3 PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.7e-78
Identity = 173/426 (40.61%), Postives = 258/426 (60.56%), Query Frame = 0


Query: 4   VEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLYVLE 63
           +E  V  ++ LS+  G +++L  L+ +S ELL  + + L + L  LD  +HSLG L VL 
Sbjct: 5   LEQFVNSVRQLSA-QGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  ACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLRGVA 123
              S P S     +    +  FIS+CN E IR A + F  +C +L   ++  + PLRG+ 
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIG 124

Query: 124 PLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQ------PRDLF 183
            L  AI K+Q ++  LT++H +   LC+LAKC+K     LD D++++ +       +   
Sbjct: 125 ILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFL 184

Query: 184 LYCYYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSL 243
            Y YYGGMI  GLK F +AL      +T P   ++ I +E+YKKYILVSLI  G+    L
Sbjct: 185 CYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQ-QL 244

Query: 244 PKYTSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSS 303
           PKYTS +  R +K     Y ELA  YST N +EL   +  + E F  DNN+GLV Q +SS
Sbjct: 245 PKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSS 304

Query: 304 MYKRNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFL 363
           +YK+NIQRLT+T+LTLSLQD+A+ V+L+ P+EAE +VL MI+DGEIFA+INQKDGMV F 
Sbjct: 305 LYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFH 364

Query: 364 EDSEQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDS 423
           ++ E+Y +  M+ +ID  + + + L ++L  MD+ I+ +P ++ K+   ++    DD  +
Sbjct: 365 DNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQE----DDSGN 423

[Close]

BLAST of MS003468 vs. ExPASy Swiss-Prot
Match: Q5RFS2 (COP9 signalosome complex subunit 3 OS=Pongo abelii OX=9601 GN=COPS3 PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.7e-78
Identity = 173/426 (40.61%), Postives = 258/426 (60.56%), Query Frame = 0


Query: 4   VEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLYVLE 63
           +E  V  ++ LS+  G +++L  L+ +S ELL  + + L + L  LD  +HSLG L VL 
Sbjct: 5   LEQFVNSVRQLSA-QGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  ACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLRGVA 123
              S P S     +    +  FIS+CN E IR A + F  +C +L   ++  + PLRG+ 
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIG 124

Query: 124 PLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQ------PRDLF 183
            L  AI K+Q ++  LT++H +   LC+LAKC+K     LD D++++ +       +   
Sbjct: 125 ILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFL 184

Query: 184 LYCYYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSL 243
            Y YYGGMI  GLK F +AL      +T P   ++ I +E+YKKYILVSLI  G+    L
Sbjct: 185 CYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQ-QL 244

Query: 244 PKYTSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSS 303
           PKYTS +  R +K     Y ELA  YST N +EL   +  + E F  DNN+GLV Q +SS
Sbjct: 245 PKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSS 304

Query: 304 MYKRNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFL 363
           +YK+NIQRLT+T+LTLSLQD+A+ V+L+ P+EAE +VL MI+DGEIFA+INQKDGMV F 
Sbjct: 305 LYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFH 364

Query: 364 EDSEQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDS 423
           ++ E+Y +  M+ +ID  + + + L ++L  MD+ I+ +P ++ K+   ++    DD  +
Sbjct: 365 DNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQE----DDSGN 423

[Close]

BLAST of MS003468 vs. ExPASy Swiss-Prot
Match: O88543 (COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=3)

HSP 1 Score: 294.3 bits (752), Expect = 2.2e-78
Identity = 173/426 (40.61%), Postives = 258/426 (60.56%), Query Frame = 0


Query: 4   VEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLYVLE 63
           +E  V  ++ LS+  G +++L  L+ +S ELL  + + L + L  LD  +HSLG L VL 
Sbjct: 5   LEQFVNSVRQLSA-QGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  ACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLRGVA 123
              S P S     +    +  FIS+CN E IR A + F  +C +L   ++  + PLRG+ 
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIG 124

Query: 124 PLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQ------PRDLF 183
            L  AI K+Q ++  LT++H +   LC+LAKC+K     LD D++++ +       +   
Sbjct: 125 ILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFL 184

Query: 184 LYCYYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSL 243
            Y YYGGMI  GLK F +AL      +T P   ++ I +E+YKKYILVSLI  G+    L
Sbjct: 185 CYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQ-QL 244

Query: 244 PKYTSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSS 303
           PKYTS +  R +K     Y ELA  YST N +EL   +  + E F  DNN+GLV Q +SS
Sbjct: 245 PKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVSKHSETFTRDNNMGLVKQCLSS 304

Query: 304 MYKRNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFL 363
           +YK+NIQRLT+T+LTLSLQD+A+ V+L+ P+EAE +VL MI+DGEIFA+INQKDGMV F 
Sbjct: 305 LYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFH 364

Query: 364 EDSEQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDS 423
           ++ E+Y +  M+ +ID  + + + L ++L  MD+ I+ +P ++ K+   ++    DD  +
Sbjct: 365 DNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQE----DDSGN 423

[Close]

BLAST of MS003468 vs. ExPASy TrEMBL
Match: A0A6J1BXE8 (COP9 signalosome complex subunit 3 OS=Momordica charantia OX=3673 GN=LOC111006211 PE=4 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 4.8e-233
Identity = 422/424 (99.53%), Postives = 423/424 (99.76%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSAL QLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALTQLDASKHSLGYLY 60

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
           VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR
Sbjct: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC
Sbjct: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY
Sbjct: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
           TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK
Sbjct: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420
           EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ
Sbjct: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420

Query: 421 KFNI 425
           KFN+
Sbjct: 421 KFNV 424

[Close]

BLAST of MS003468 vs. ExPASy TrEMBL
Match: A0A5A7UNF8 (COP9 signalosome complex subunit 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00480 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 3.8e-214
Identity = 387/424 (91.27%), Postives = 406/424 (95.75%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLS+TAGDISRLHTLLKQSEELLH +T+ LPSALAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSTTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
           +LEACTS PISQEQSSS +LTISRFISSCNPEQIRLAPEKFVSVCKR K+QV + EAP+R
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISSCNPEQIRLAPEKFVSVCKRFKDQV-IQEAPIR 120

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GVAPLLTA+RKLQTSSEHLTTLHPEFLLLC+LAK YK GRSILDNDILEVDQPRDLFLYC
Sbjct: 121 GVAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYC 180

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLKLF KALELLHNVVTAPM ++NAIAVEAYKKYILVSLIYNGQFSTSLPKY
Sbjct: 181 YYGGMICIGLKLFQKALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQFSTSLPKY 240

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
           TSSVAQRNLKNFCQPYIELANSYSTGN+ ELDT  QTN++KFESDNNLGLV Q VSSMYK
Sbjct: 241 TSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVKQAVSSMYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNIQRLTQTYLTLSLQDIA+TVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS
Sbjct: 301 RNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420
           EQYKS +MIEHIDSSI+RIMTL+KKLT MDENISSDPLYLAKAGRERQRFDYDDFDSVPQ
Sbjct: 361 EQYKSCRMIEHIDSSIQRIMTLSKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420

Query: 421 KFNI 425
           KFNI
Sbjct: 421 KFNI 423

[Close]

BLAST of MS003468 vs. ExPASy TrEMBL
Match: A0A6J1JY07 (COP9 signalosome complex subunit 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488907 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 3.8e-214
Identity = 385/424 (90.80%), Postives = 406/424 (95.75%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           M TVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLH DTA LPSALAQLDAS+HSLGYL+
Sbjct: 1   MATVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHADTARLPSALAQLDASEHSLGYLF 60

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
           +LEACTS PISQ+QSSS +LTISRFISSCN +QIRLAPEKF SVCKR K+QV +LEAP+R
Sbjct: 61  ILEACTSVPISQDQSSSIILTISRFISSCNQDQIRLAPEKFASVCKRFKDQV-MLEAPIR 120

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GVAPLLTAIRKLQTSSEHLT+LHP+FLLLC+LAKCYK GRSILDNDILEVDQPRDLFLYC
Sbjct: 121 GVAPLLTAIRKLQTSSEHLTSLHPDFLLLCLLAKCYKTGRSILDNDILEVDQPRDLFLYC 180

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLKLFHKALELLHNVVTAPMP++NAIAVEAYKKYIL+SLIYNGQFS+SLPKY
Sbjct: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPSLNAIAVEAYKKYILLSLIYNGQFSSSLPKY 240

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
           TSSVAQRNLKNFCQPYIELANSY TGN+ ELDT  QTN+EKFESDNNLGLV Q VSS+YK
Sbjct: 241 TSSVAQRNLKNFCQPYIELANSYGTGNVDELDTVFQTNREKFESDNNLGLVKQAVSSLYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420
           EQYKS KMIE+IDSSI+RIMTLAKKLT MDENISSDPLYLAKAGRERQRFDYDDFDSVPQ
Sbjct: 361 EQYKSCKMIENIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420

Query: 421 KFNI 425
           KFNI
Sbjct: 421 KFNI 423

[Close]

BLAST of MS003468 vs. ExPASy TrEMBL
Match: A0A1S3B2T4 (COP9 signalosome complex subunit 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485502 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 3.8e-214
Identity = 387/424 (91.27%), Postives = 406/424 (95.75%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLS+TAGDISRLHTLLKQSEELLH +T+ LPSALAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSTTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
           +LEACTS PISQEQSSS +LTISRFISSCNPEQIRLAPEKFVSVCKR K+QV + EAP+R
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISSCNPEQIRLAPEKFVSVCKRFKDQV-IQEAPIR 120

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GVAPLLTA+RKLQTSSEHLTTLHPEFLLLC+LAK YK GRSILDNDILEVDQPRDLFLYC
Sbjct: 121 GVAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYC 180

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLKLF KALELLHNVVTAPM ++NAIAVEAYKKYILVSLIYNGQFSTSLPKY
Sbjct: 181 YYGGMICIGLKLFQKALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQFSTSLPKY 240

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
           TSSVAQRNLKNFCQPYIELANSYSTGN+ ELDT  QTN++KFESDNNLGLV Q VSSMYK
Sbjct: 241 TSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVKQAVSSMYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNIQRLTQTYLTLSLQDIA+TVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS
Sbjct: 301 RNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420
           EQYKS +MIEHIDSSI+RIMTL+KKLT MDENISSDPLYLAKAGRERQRFDYDDFDSVPQ
Sbjct: 361 EQYKSCRMIEHIDSSIQRIMTLSKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420

Query: 421 KFNI 425
           KFNI
Sbjct: 421 KFNI 423

[Close]

BLAST of MS003468 vs. ExPASy TrEMBL
Match: A0A0A0KBF0 (PCI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008050 PE=4 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 1.1e-213
Identity = 386/424 (91.04%), Postives = 404/424 (95.28%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLH +T+ LPSALAQLDASKHSLGYLY
Sbjct: 64  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 123

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
           +LEACTS PISQEQSSS +LTISRFIS CNPEQIRLAPEKFVSVCKR K+QV + EAP+R
Sbjct: 124 ILEACTSVPISQEQSSSILLTISRFISCCNPEQIRLAPEKFVSVCKRFKDQV-IQEAPIR 183

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GVAPLLTA+RKLQTSSEHLTTLHPEFLLLC+LAK YK GRSILDNDILEVDQPRDLFLYC
Sbjct: 184 GVAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYC 243

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMIC+GLKLFHKALELLHNVVTAPM ++NAIAVEAYKKYILVSLIYNGQFSTSLPKY
Sbjct: 244 YYGGMICVGLKLFHKALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQFSTSLPKY 303

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
           TSSVAQRNLKNFCQPYIELANSYSTGN+ ELDT  QTN++KFESDNNLGLV Q VSSMYK
Sbjct: 304 TSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVKQAVSSMYK 363

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNIQRLTQTYLTLSLQDIA+TVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS
Sbjct: 364 RNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 423

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 420
           EQYKS +MIE IDSSI+RIMTL KKLT MDENISSDPLYLAKAGRERQRFDYDDFDSVPQ
Sbjct: 424 EQYKSCRMIERIDSSIQRIMTLTKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQ 483

Query: 421 KFNI 425
           KFNI
Sbjct: 484 KFNI 486

[Close]

BLAST of MS003468 vs. TAIR 10
Match: AT5G14250.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 513.8 bits (1322), Expect = 1.3e-145
Identity = 268/425 (63.06%), Postives = 329/425 (77.41%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           + +VE ++  IQGLS +  D+S LH LL+ +++ L  +     S L QLDASKHSLGYLY
Sbjct: 5   VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
            LE  T GP+S+E+++  +  I+RFI+SC+  QIRLA  KFVS+CK LK+ V+ L  PLR
Sbjct: 65  FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALGDPLR 124

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GV PLL A++KLQ SS+ LT LHP+ L LC+ AK YK+G SIL +DI+E+DQPRD FLY 
Sbjct: 125 GVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDFFLYS 184

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLK F KALELL+NVVTAPM  +NAIA+EAYKKYILVSLI+NGQF+ +LPK 
Sbjct: 185 YYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQFTNTLPKC 244

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
            S+ AQR+ KN+  PYIEL N Y+ G I EL+  +     +FE D NLGLV Q VSS+YK
Sbjct: 245 ASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVKQAVSSLYK 304

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDS 360
           RNI RLTQ YLTLSLQDIAN V+L + KEAEMHVLQMIQDG+I A INQKDGMVRFLED 
Sbjct: 305 RNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKDGMVRFLEDP 364

Query: 361 EQYKSSKMIEHIDSSIRRIMTLAKKLTTMDENISSDPLYLAKAGRERQRFDY-DDFDSVP 420
           EQYKSS+MIE +DS I+R + L+K L  MDE++S DPLYL K GRERQR+D+ DDFD+VP
Sbjct: 365 EQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGKVGRERQRYDFGDDFDTVP 424

Query: 421 QKFNI 425
           QKF++
Sbjct: 425 QKFSM 429

[Close]

BLAST of MS003468 vs. TAIR 10
Match: AT5G14250.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 397.5 bits (1020), Expect = 1.3e-110
Identity = 207/338 (61.24%), Postives = 256/338 (75.74%), Query Frame = 0


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHTDTASLPSALAQLDASKHSLGYLY 60
           + +VE ++  IQGLS +  D+S LH LL+ +++ L  +     S L QLDASKHSLGYLY
Sbjct: 5   VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64

Query: 61  VLEACTSGPISQEQSSSTVLTISRFISSCNPEQIRLAPEKFVSVCKRLKEQVLLLEAPLR 120
            LE  T GP+S+E+++  +  I+RFI+SC+  QIRLA  KFVS+CK LK+ V+ L  PLR
Sbjct: 65  FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALGDPLR 124

Query: 121 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCVLAKCYKAGRSILDNDILEVDQPRDLFLYC 180
           GV PLL A++KLQ SS+ LT LHP+ L LC+ AK YK+G SIL +DI+E+DQPRD FLY 
Sbjct: 125 GVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDFFLYS 184

Query: 181 YYGGMICIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSLPKY 240
           YYGGMICIGLK F KALELL+NVVTAPM  +NAIA+EAYKKYILVSLI+NGQF+ +LPK 
Sbjct: 185 YYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQFTNTLPKC 244

Query: 241 TSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSSMYK 300
            S+ AQR+ KN+  PYIEL N Y+ G I EL+  +     +FE D NLGLV Q VSS+YK
Sbjct: 245 ASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVKQAVSSLYK 304

Query: 301 RNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMI 339
           RNI RLTQ YLTLSLQDIAN V+L + KEAEMHVLQM+
Sbjct: 305 RNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMV 342

[Close]

BLAST of MS003468 vs. TAIR 10
Match: AT1G20200.1 (PAM domain (PCI/PINT associated module) protein )

HSP 1 Score: 57.0 bits (136), Expect = 4.3e-08
Identity = 50/193 (25.91%), Postives = 93/193 (48.19%), Query Frame = 0


Query: 179 YCYYGGMI-CIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSL 238
           Y +Y G I  I L+       LL     AP+  +    ++  K  ILV L+        +
Sbjct: 242 YLFYLGKIRTIQLEYTDAKESLLQAARKAPIAAL-GFRIQCNKWAILVRLLLG-----EI 301

Query: 239 PKYTSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSS 298
           P+  S   Q+ ++   +PY EL N+   G++    T  +   + F  D    L+ ++  +
Sbjct: 302 PE-RSIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIVRLRHN 361

Query: 299 MYKRNIQRLTQTYLTLSLQDIANTVKLNSPK---EAEMHVLQMIQDGEIFATINQKDGMV 358
           + +  ++ ++ +Y  +SL D+A  ++LNS     +AE  V + I+DG I ATI+ K+G +
Sbjct: 362 VIRTGLRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKAIRDGAIDATIDHKNGCM 421

Query: 359 RFLEDSEQYKSSK 368
              E  + Y +++
Sbjct: 422 VSKETGDIYSTNE 427

[Close]

BLAST of MS003468 vs. TAIR 10
Match: AT1G75990.1 (PAM domain (PCI/PINT associated module) protein )

HSP 1 Score: 56.6 bits (135), Expect = 5.6e-08
Identity = 49/193 (25.39%), Postives = 94/193 (48.70%), Query Frame = 0


Query: 179 YCYYGGMI-CIGLKLFHKALELLHNVVTAPMPTINAIAVEAYKKYILVSLIYNGQFSTSL 238
           Y +Y G I  I L+       LL     AP+ ++    ++  K  I+V L+        +
Sbjct: 241 YLFYLGKIRTIQLEYTDAKESLLQAARKAPVASL-GFRIQCNKWAIIVRLLLG-----EI 300

Query: 239 PKYTSSVAQRNLKNFCQPYIELANSYSTGNITELDTALQTNKEKFESDNNLGLVNQVVSS 298
           P+  S   Q+ ++   +PY EL N+   G++       +   + F  D    L+ ++  +
Sbjct: 301 PE-RSIFTQKGMEKTLRPYFELTNAVRIGDLELFGKIQEKFAKTFAEDRTHNLIVRLRHN 360

Query: 299 MYKRNIQRLTQTYLTLSLQDIANTVKLNSPK---EAEMHVLQMIQDGEIFATINQKDGMV 358
           + +  ++ ++ +Y  +SLQD+A  ++LNS     +AE  V + I+DG I ATI+ K+G +
Sbjct: 361 VIRTGLRNISISYSRISLQDVAQKLRLNSANPVADAESIVAKAIRDGAIDATIDHKNGCM 420

Query: 359 RFLEDSEQYKSSK 368
              E  + Y +++
Sbjct: 421 VSKETGDIYSTNE 426

The following BLAST results are available for this feature:

BLAST of MS003468 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133687.1	9.9e-233	99.53	COP9 signalosome complex subunit 3 [Momordica charantia]	[more]
XP_038886130.1	4.5e-217	92.69	COP9 signalosome complex subunit 3 [Benincasa hispida]	[more]
XP_022992614.1	7.9e-214	90.80	COP9 signalosome complex subunit 3-like isoform X1 [Cucurbita maxima]	[more]
XP_008441368.1	7.9e-214	91.27	PREDICTED: COP9 signalosome complex subunit 3 isoform X1 [Cucumis melo] >KAA0056...	[more]
KAG6578376.1	2.3e-213	90.80	COP9 signalosome complex subunit 3, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of MS003468 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W575	1.8e-144	63.06	COP9 signalosome complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=CSN3 PE=1 ...	[more]
Q9UNS2	1.7e-78	40.61	COP9 signalosome complex subunit 3 OS=Homo sapiens OX=9606 GN=COPS3 PE=1 SV=3	[more]
Q4R898	1.7e-78	40.61	COP9 signalosome complex subunit 3 OS=Macaca fascicularis OX=9541 GN=COPS3 PE=2 ...	[more]
Q5RFS2	1.7e-78	40.61	COP9 signalosome complex subunit 3 OS=Pongo abelii OX=9601 GN=COPS3 PE=2 SV=1	[more]
O88543	2.2e-78	40.61	COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=3	[more]

BLAST of MS003468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BXE8	4.8e-233	99.53	COP9 signalosome complex subunit 3 OS=Momordica charantia OX=3673 GN=LOC11100621...	[more]
A0A5A7UNF8	3.8e-214	91.27	COP9 signalosome complex subunit 3 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1JY07	3.8e-214	90.80	COP9 signalosome complex subunit 3-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A1S3B2T4	3.8e-214	91.27	COP9 signalosome complex subunit 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0KBF0	1.1e-213	91.04	PCI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008050 PE=4 SV...	[more]

BLAST of MS003468 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14250.1	1.3e-145	63.06	Proteasome component (PCI) domain protein	[more]
AT5G14250.2	1.3e-110	61.24	Proteasome component (PCI) domain protein	[more]
AT1G20200.1	4.3e-08	25.91	PAM domain (PCI/PINT associated module) protein	[more]
AT1G75990.1	5.6e-08	25.39	PAM domain (PCI/PINT associated module) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00753	PINT	coord: 289..379 e-value: 1.7E-21 score: 87.4
None	No IPR available	GENE3D	1.25.40.570		coord: 195..388 e-value: 3.4E-10 score: 41.5
None	No IPR available	PANTHER	PTHR10758	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3	coord: 1..419
None	No IPR available	PANTHER	PTHR10758:SF14	COP9 SIGNALOSOME COMPLEX SUBUNIT 3-LIKE ISOFORM X1	coord: 1..419
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 289..379 e-value: 1.7E-21 score: 87.4
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 255..356 e-value: 1.3E-19 score: 70.6
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 192..361 score: 30.957497
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 290..363

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003468.1	MS003468.1	mRNA