MS003462 (gene) Bitter gourd (TR) v1

Overview


Name	MS003462
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Prohibitin
Location	scaffold234: 2959358 .. 2959891 (+)
RNA-Seq Expression	MS003462
Synteny	MS003462

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGGAGCAGCCGCGCTGCCGTGTCGTTTCTCACCAAATTAGCCGCTACCTTCGCATTTGGCGCTGCCGGCGCCGCCTCAGTTATAAATACGTCCACGTACACCGTCGGGTGCGGCGAACGAGCCATAATCCTGAACCGATTTGGAGGCGTGATGAAGGAGAGTTTGGGGGAAGGAACTCACTTCGTCATCCCATGGCGGCAGAAGCCAATTATATCCGACGTGACTGCACGAGCCCACAGTTTCGCCTCTGTTTCGCAGACCAGAGACCTCCAGTGGGTGAATCTGAGAATATCCGTGCAGTCACGGCCGGATGCGTCTCGACTTCCCGATATTTACAAAACCATAGGGATTCCGTATGACGAGAATGTGATCGCGCCTTGTATCCGCGACGAGGTTCAGGATGTGGTGGGTCAACTCCACGCCGACGAGCTTTTGAGCCACTGGGTTCGTGTGTCGGCGGTTCTGCGTGAGAGACTGATTTCGCGAGCGAAGGAGGATTTCAACATTCTTCTAGATGATGTTCGTATCACT

mRNA sequence

TTGGGGAGCAGCCGCGCTGCCGTGTCGTTTCTCACCAAATTAGCCGCTACCTTCGCATTTGGCGCTGCCGGCGCCGCCTCAGTTATAAATACGTCCACGTACACCGTCGGGTGCGGCGAACGAGCCATAATCCTGAACCGATTTGGAGGCGTGATGAAGGAGAGTTTGGGGGAAGGAACTCACTTCGTCATCCCATGGCGGCAGAAGCCAATTATATCCGACGTGACTGCACGAGCCCACAGTTTCGCCTCTGTTTCGCAGACCAGAGACCTCCAGTGGGTGAATCTGAGAATATCCGTGCAGTCACGGCCGGATGCGTCTCGACTTCCCGATATTTACAAAACCATAGGGATTCCGTATGACGAGAATGTGATCGCGCCTTGTATCCGCGACGAGGTTCAGGATGTGGTGGGTCAACTCCACGCCGACGAGCTTTTGAGCCACTGGGTTCGTGTGTCGGCGGTTCTGCGTGAGAGACTGATTTCGCGAGCGAAGGAGGATTTCAACATTCTTCTAGATGATGTTCGTATCACT

Coding sequence (CDS)

TTGGGGAGCAGCCGCGCTGCCGTGTCGTTTCTCACCAAATTAGCCGCTACCTTCGCATTTGGCGCTGCCGGCGCCGCCTCAGTTATAAATACGTCCACGTACACCGTCGGGTGCGGCGAACGAGCCATAATCCTGAACCGATTTGGAGGCGTGATGAAGGAGAGTTTGGGGGAAGGAACTCACTTCGTCATCCCATGGCGGCAGAAGCCAATTATATCCGACGTGACTGCACGAGCCCACAGTTTCGCCTCTGTTTCGCAGACCAGAGACCTCCAGTGGGTGAATCTGAGAATATCCGTGCAGTCACGGCCGGATGCGTCTCGACTTCCCGATATTTACAAAACCATAGGGATTCCGTATGACGAGAATGTGATCGCGCCTTGTATCCGCGACGAGGTTCAGGATGTGGTGGGTCAACTCCACGCCGACGAGCTTTTGAGCCACTGGGTTCGTGTGTCGGCGGTTCTGCGTGAGAGACTGATTTCGCGAGCGAAGGAGGATTTCAACATTCTTCTAGATGATGTTCGTATCACT

Protein sequence

LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGTHFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPYDENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT

Homology

[Close]

BLAST of MS003462 vs. NCBI nr
Match: XP_022134329.1 (prohibitin-3, mitochondrial-like [Momordica charantia])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 165/174 (94.83%), Postives = 169/174 (97.13%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GSSRAAVSFLTKLAA+FAFGAAGAAS+INTSTYTVGCGERAIILNRFGGVMKESLGEGT
Sbjct: 1   MGSSRAAVSFLTKLAASFAFGAAGAASIINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HFVIPWRQKPIISDV AR HSFA VSQTRDLQWVNLRIS+QSRPDASRLPDIYKTIGI Y
Sbjct: 61  HFVIPWRQKPIISDVAARTHSFAPVSQTRDLQWVNLRISMQSRPDASRLPDIYKTIGISY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDD 175
            ENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDD
Sbjct: 121 GENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDD 174

[Close]

BLAST of MS003462 vs. NCBI nr
Match: KAG6577447.1 (Prohibitin-3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.8 bits (486), Expect = 5.0e-45
Identity = 101/178 (56.74%), Postives = 133/178 (74.72%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GSS+AAVSFLT +A   AFG   AASV+N S YTV  GERA++ +RF GV+ +++GEGT
Sbjct: 1   MGSSQAAVSFLTNIARA-AFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IPW QKP I D+  R H+F+SVS T+DLQ VNL + V SRP+ SRLPDI+KT+G+ Y
Sbjct: 61  HFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV Q +AD+LL+    VSA++RE L+ RAK DFNI+LDDV IT
Sbjct: 121 DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAK-DFNIVLDDVAIT 176

[Close]

BLAST of MS003462 vs. NCBI nr
Match: XP_022134034.1 (prohibitin-3, mitochondrial [Momordica charantia])

HSP 1 Score: 191.8 bits (486), Expect = 5.0e-45
Identity = 102/178 (57.30%), Postives = 133/178 (74.72%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GSS+AAVSFLT LA   AFG   AASV+N S +TV  GERA++ +RF GV+ +++GEGT
Sbjct: 1   MGSSQAAVSFLTNLARA-AFGLGAAASVLNASLFTVDGGERAVLFDRFRGVIDDTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IPW QKP I D+  R H+F+SVS T+DLQ VNL + V SRP+ SRLPDI+KT+G+ Y
Sbjct: 61  HFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEISRLPDIFKTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV Q +AD+LL+    VSA++RE LI RAK DFNI+LDDV IT
Sbjct: 121 DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRAK-DFNIVLDDVAIT 176

[Close]

BLAST of MS003462 vs. NCBI nr
Match: XP_022932154.1 (prohibitin-3, mitochondrial [Cucurbita moschata] >XP_022932155.1 prohibitin-3, mitochondrial [Cucurbita moschata] >XP_022932156.1 prohibitin-3, mitochondrial [Cucurbita moschata] >XP_022932157.1 prohibitin-3, mitochondrial [Cucurbita moschata] >XP_022985248.1 prohibitin-3, mitochondrial [Cucurbita maxima] >XP_022985249.1 prohibitin-3, mitochondrial [Cucurbita maxima] >XP_022985250.1 prohibitin-3, mitochondrial [Cucurbita maxima] >XP_022985251.1 prohibitin-3, mitochondrial [Cucurbita maxima] >XP_023520430.1 prohibitin-3, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520431.1 prohibitin-3, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191.8 bits (486), Expect = 5.0e-45
Identity = 101/178 (56.74%), Postives = 133/178 (74.72%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GSS+AAVSFLT +A   AFG   AASV+N S YTV  GERA++ +RF GV+ +++GEGT
Sbjct: 1   MGSSQAAVSFLTNIARA-AFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IPW QKP I D+  R H+F+SVS T+DLQ VNL + V SRP+ SRLPDI+KT+G+ Y
Sbjct: 61  HFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV Q +AD+LL+    VSA++RE L+ RAK DFNI+LDDV IT
Sbjct: 121 DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAK-DFNIVLDDVAIT 176

[Close]

BLAST of MS003462 vs. NCBI nr
Match: XP_038880585.1 (prohibitin-3, mitochondrial [Benincasa hispida])

HSP 1 Score: 191.4 bits (485), Expect = 6.5e-45
Identity = 102/178 (57.30%), Postives = 132/178 (74.16%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GSS+AAVSFLT +A   AFG   AASV+N S YTV  GERA++ +RF GV+ E++GEGT
Sbjct: 1   MGSSQAAVSFLTNIARA-AFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDETVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IPW QKP I D+  R H+F+SVS T+DLQ VNL + V SRP+ SRLPDI+KT+G+ Y
Sbjct: 61  HFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV Q +AD+LL+    VSA++RE L+ RAK DFNI LDDV IT
Sbjct: 121 DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAK-DFNIELDDVAIT 176

[Close]

BLAST of MS003462 vs. ExPASy Swiss-Prot
Match: O04331 (Prohibitin-3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB3 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 96/178 (53.93%), Postives = 132/178 (74.16%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GS +AAVSFL+ LA   AFG   AA+V+NTS +TV  GERA+I +RF GVM +++GEGT
Sbjct: 1   MGSQQAAVSFLSNLAKA-AFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IP  Q+P I D+  + H+F+S+S T+DLQ VNL + V SRP+ SRLP I++T+G+ Y
Sbjct: 61  HFLIPILQRPHIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV Q +AD+LL+    VSA++RE LI+RAK DFNI+LDDV IT
Sbjct: 121 DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLITRAK-DFNIVLDDVAIT 176

[Close]

BLAST of MS003462 vs. ExPASy Swiss-Prot
Match: Q9LK25 (Prohibitin-4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB4 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 87/178 (48.88%), Postives = 126/178 (70.79%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GS + A+SFLT LA   AFG   AA+ +N+S YTV  GERA++ +RF GV+ +++GEGT
Sbjct: 1   MGSQQVAISFLTNLAKA-AFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IP+ Q P I D+  + H+F+S S T+DLQ VNL + V  RP+ SRLP I++T+G+ Y
Sbjct: 61  HFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV   +AD+LL+   +VSA++R+ LI RA+E FNI LDD+ IT
Sbjct: 121 DEKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRARE-FNIELDDIAIT 176

[Close]

BLAST of MS003462 vs. ExPASy Swiss-Prot
Match: P50085 (Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PHB2 PE=1 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-31
Identity = 70/155 (45.16%), Postives = 98/155 (63.23%), Query Frame = 0


Query: 24  GAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGTHFVIPWRQKPIISDVTARAHSFA 83
           G A  IN + + V  G RAI+ +R  GV      EGTHF+ PW   PII DV A+  + A
Sbjct: 49  GGALFINNALFNVDGGHRAIVYSRIHGVSSRIFNEGTHFIFPWLDTPIIYDVRAKPRNVA 108

Query: 84  SVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPYDENVIAPCIRDEVQDVVGQLHAD 143
           S++ T+DLQ VN+   V SRPD  +LP IY+T+G  YDE V+   + + ++ VV Q +A 
Sbjct: 109 SLTGTKDLQMVNITCRVLSRPDVVQLPTIYRTLGQDYDERVLPSIVNEVLKAVVAQFNAS 168

Query: 144 ELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           +L++   +VS ++RE L+ RA + FNILLDDV IT
Sbjct: 169 QLITQREKVSRLIRENLVRRASK-FNILLDDVSIT 202

[Close]

BLAST of MS003462 vs. ExPASy Swiss-Prot
Match: Q54GI9 (Prohibitin-1, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=phbA PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-30
Identity = 73/170 (42.94%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 9   SFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGTHFVIPWRQ 68
           SFL KL    A       S+  +S YTV  G+RA+I +R  GV ++S+GEGTHF++PW Q
Sbjct: 3   SFLNKL-IPLALTVGTGLSLAQSSMYTVDGGQRAVIFDRISGVKEKSVGEGTHFIMPWLQ 62

Query: 69  KPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPYDENVIAPC 128
           KPII D+ +   +  S + ++DLQ V++ + V  RPD   LP I+  +G+ YDE ++   
Sbjct: 63  KPIIFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSKLGLDYDERILPSL 122

Query: 129 IRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
             + ++ VV Q  A EL++    VS  +RE L+ RAKE FN+LLDDV IT
Sbjct: 123 GNEVLKSVVAQYDATELITQREVVSKEIRESLMKRAKE-FNLLLDDVSIT 170

[Close]

BLAST of MS003462 vs. ExPASy Swiss-Prot
Match: A9UMS3 (Prohibitin-2 OS=Xenopus tropicalis OX=8364 GN=phb2 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.3e-29
Identity = 70/165 (42.42%), Postives = 101/165 (61.21%), Query Frame = 0


Query: 15  AATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKES-LGEGTHFVIPWRQKPIIS 74
           A     GA   A  +  S +TV  G RAI  NR GGV +++ L EG HF  PW Q PII 
Sbjct: 22  AMKLLLGAGAVAYAVKESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRFPWFQYPIIY 81

Query: 75  DVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPYDENVIAPCIRDEV 134
           D+ AR    +S + ++DLQ VN+ + V SRP AS LP +Y+ +G+ YDE V+   + + +
Sbjct: 82  DIRARPRKISSPTGSKDLQMVNITLRVLSRPLASELPFMYQRLGLDYDERVLPSIVNEVL 141

Query: 135 QDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           + VV + +A +L++   +VS ++R  L  RAK DF+I+LDDV IT
Sbjct: 142 KSVVAKFNASQLITQRAQVSLLIRRELTERAK-DFSIILDDVAIT 185

[Close]

BLAST of MS003462 vs. ExPASy TrEMBL
Match: A0A6J1BYH4 (Prohibitin OS=Momordica charantia OX=3673 GN=LOC111006615 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.3e-86
Identity = 165/174 (94.83%), Postives = 169/174 (97.13%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GSSRAAVSFLTKLAA+FAFGAAGAAS+INTSTYTVGCGERAIILNRFGGVMKESLGEGT
Sbjct: 1   MGSSRAAVSFLTKLAASFAFGAAGAASIINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HFVIPWRQKPIISDV AR HSFA VSQTRDLQWVNLRIS+QSRPDASRLPDIYKTIGI Y
Sbjct: 61  HFVIPWRQKPIISDVAARTHSFAPVSQTRDLQWVNLRISMQSRPDASRLPDIYKTIGISY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDD 175
            ENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDD
Sbjct: 121 GENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDD 174

[Close]

BLAST of MS003462 vs. ExPASy TrEMBL
Match: A0A6J1JCS5 (Prohibitin OS=Cucurbita maxima OX=3661 GN=LOC111483298 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.4e-45
Identity = 101/178 (56.74%), Postives = 133/178 (74.72%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GSS+AAVSFLT +A   AFG   AASV+N S YTV  GERA++ +RF GV+ +++GEGT
Sbjct: 1   MGSSQAAVSFLTNIARA-AFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IPW QKP I D+  R H+F+SVS T+DLQ VNL + V SRP+ SRLPDI+KT+G+ Y
Sbjct: 61  HFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV Q +AD+LL+    VSA++RE L+ RAK DFNI+LDDV IT
Sbjct: 121 DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAK-DFNIVLDDVAIT 176

[Close]

BLAST of MS003462 vs. ExPASy TrEMBL
Match: A0A6J1EVK6 (Prohibitin OS=Cucurbita moschata OX=3662 GN=LOC111438475 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.4e-45
Identity = 101/178 (56.74%), Postives = 133/178 (74.72%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GSS+AAVSFLT +A   AFG   AASV+N S YTV  GERA++ +RF GV+ +++GEGT
Sbjct: 1   MGSSQAAVSFLTNIARA-AFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDDTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IPW QKP I D+  R H+F+SVS T+DLQ VNL + V SRP+ SRLPDI+KT+G+ Y
Sbjct: 61  HFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLPDIFKTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV Q +AD+LL+    VSA++RE L+ RAK DFNI+LDDV IT
Sbjct: 121 DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAK-DFNIVLDDVAIT 176

[Close]

BLAST of MS003462 vs. ExPASy TrEMBL
Match: A0A6J1BXN0 (Prohibitin OS=Momordica charantia OX=3673 GN=LOC111006407 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.4e-45
Identity = 102/178 (57.30%), Postives = 133/178 (74.72%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GSS+AAVSFLT LA   AFG   AASV+N S +TV  GERA++ +RF GV+ +++GEGT
Sbjct: 1   MGSSQAAVSFLTNLARA-AFGLGAAASVLNASLFTVDGGERAVLFDRFRGVIDDTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IPW QKP I D+  R H+F+SVS T+DLQ VNL + V SRP+ SRLPDI+KT+G+ Y
Sbjct: 61  HFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEISRLPDIFKTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV Q +AD+LL+    VSA++RE LI RAK DFNI+LDDV IT
Sbjct: 121 DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRAK-DFNIVLDDVAIT 176

[Close]

BLAST of MS003462 vs. ExPASy TrEMBL
Match: A0A1S3BVE0 (Prohibitin OS=Cucumis melo OX=3656 GN=LOC103493907 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 9.2e-45
Identity = 101/178 (56.74%), Postives = 132/178 (74.16%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GSS+AAVSFLT +A   AFG   AASV+N S YTV  GERA++ +RF GV+ E++GEGT
Sbjct: 1   MGSSQAAVSFLTNIARA-AFGLGAAASVLNASLYTVDGGERAVLFDRFRGVIDETVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IPW QKP I D+  R H+F+SVS T+DLQ VNL + V SRP+ SRL DI+KT+G+ Y
Sbjct: 61  HFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPEISRLSDIFKTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV Q +AD+LL+    VSA++RE L+ RAK DFNI+LDDV IT
Sbjct: 121 DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLVRRAK-DFNIVLDDVAIT 176

[Close]

BLAST of MS003462 vs. TAIR 10
Match: AT5G40770.1 (prohibitin 3 )

HSP 1 Score: 177.6 bits (449), Expect = 9.1e-45
Identity = 96/178 (53.93%), Postives = 132/178 (74.16%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GS +AAVSFL+ LA   AFG   AA+V+NTS +TV  GERA+I +RF GVM +++GEGT
Sbjct: 1   MGSQQAAVSFLSNLAKA-AFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IP  Q+P I D+  + H+F+S+S T+DLQ VNL + V SRP+ SRLP I++T+G+ Y
Sbjct: 61  HFLIPILQRPHIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV Q +AD+LL+    VSA++RE LI+RAK DFNI+LDDV IT
Sbjct: 121 DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLITRAK-DFNIVLDDVAIT 176

[Close]

BLAST of MS003462 vs. TAIR 10
Match: AT3G27280.2 (prohibitin 4 )

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-40
Identity = 87/178 (48.88%), Postives = 126/178 (70.79%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GS + A+SFLT LA   AFG   AA+ +N+S YTV  GERA++ +RF GV+ +++GEGT
Sbjct: 1   MGSQQVAISFLTNLAKA-AFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IP+ Q P I D+  + H+F+S S T+DLQ VNL + V  RP+ SRLP I++T+G+ Y
Sbjct: 61  HFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV   +AD+LL+   +VSA++R+ LI RA+E FNI LDD+ IT
Sbjct: 121 DEKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRARE-FNIELDDIAIT 176

[Close]

BLAST of MS003462 vs. TAIR 10
Match: AT3G27280.1 (prohibitin 4 )

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-40
Identity = 87/178 (48.88%), Postives = 126/178 (70.79%), Query Frame = 0


Query: 1   LGSSRAAVSFLTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGT 60
           +GS + A+SFLT LA   AFG   AA+ +N+S YTV  GERA++ +RF GV+ +++GEGT
Sbjct: 1   MGSQQVAISFLTNLAKA-AFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGT 60

Query: 61  HFVIPWRQKPIISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPY 120
           HF+IP+ Q P I D+  + H+F+S S T+DLQ VNL + V  RP+ SRLP I++T+G+ Y
Sbjct: 61  HFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEY 120

Query: 121 DENVIAPCIRDEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           DE V+     + ++ VV   +AD+LL+   +VSA++R+ LI RA+E FNI LDD+ IT
Sbjct: 121 DEKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRARE-FNIELDDIAIT 176

[Close]

BLAST of MS003462 vs. TAIR 10
Match: AT1G03860.1 (prohibitin 2 )

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26
Identity = 66/168 (39.29%), Postives = 98/168 (58.33%), Query Frame = 0


Query: 11  LTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGTHFVIPWRQKP 70
           L+ L      G  G  ++ N S Y V  G RA++ NR  G+ ++   EGTHF++PW ++P
Sbjct: 15  LSALLKVSVIGGLGVYALTN-SLYNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWFERP 74

Query: 71  IISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPYDENVIAPCIR 130
           II DV AR +   S + + DLQ V + + V +RP   RLP IY+T+G  Y E V+   I 
Sbjct: 75  IIYDVRARPYLVESTTGSHDLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSERVLPSIIH 134

Query: 131 DEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           + ++ VV Q +A +L++    VS  +R+ L  RA  +F+I LDDV IT
Sbjct: 135 ETLKAVVAQYNASQLITQREAVSREIRKILTERA-SNFDIALDDVSIT 180

[Close]

BLAST of MS003462 vs. TAIR 10
Match: AT1G03860.3 (prohibitin 2 )

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26
Identity = 66/168 (39.29%), Postives = 98/168 (58.33%), Query Frame = 0


Query: 11  LTKLAATFAFGAAGAASVINTSTYTVGCGERAIILNRFGGVMKESLGEGTHFVIPWRQKP 70
           L+ L      G  G  ++ N S Y V  G RA++ NR  G+ ++   EGTHF++PW ++P
Sbjct: 15  LSALLKVSVIGGLGVYALTN-SLYNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWFERP 74

Query: 71  IISDVTARAHSFASVSQTRDLQWVNLRISVQSRPDASRLPDIYKTIGIPYDENVIAPCIR 130
           II DV AR +   S + + DLQ V + + V +RP   RLP IY+T+G  Y E V+   I 
Sbjct: 75  IIYDVRARPYLVESTTGSHDLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSERVLPSIIH 134

Query: 131 DEVQDVVGQLHADELLSHWVRVSAVLRERLISRAKEDFNILLDDVRIT 179
           + ++ VV Q +A +L++    VS  +R+ L  RA  +F+I LDDV IT
Sbjct: 135 ETLKAVVAQYNASQLITQREAVSREIRKILTERA-SNFDIALDDVSIT 180

The following BLAST results are available for this feature:

BLAST of MS003462 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134329.1	1.3e-85	94.83	prohibitin-3, mitochondrial-like [Momordica charantia]	[more]
KAG6577447.1	5.0e-45	56.74	Prohibitin-3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022134034.1	5.0e-45	57.30	prohibitin-3, mitochondrial [Momordica charantia]	[more]
XP_022932154.1	5.0e-45	56.74	prohibitin-3, mitochondrial [Cucurbita moschata] >XP_022932155.1 prohibitin-3, m...	[more]
XP_038880585.1	6.5e-45	57.30	prohibitin-3, mitochondrial [Benincasa hispida]	[more]

BLAST of MS003462 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04331	1.3e-43	53.93	Prohibitin-3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB3 PE=1 SV=1	[more]
Q9LK25	2.5e-39	48.88	Prohibitin-4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB4 PE=1 SV=1	[more]
P50085	2.5e-31	45.16	Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
Q54GI9	2.1e-30	42.94	Prohibitin-1, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=phbA PE=3 SV...	[more]
A9UMS3	2.3e-29	42.42	Prohibitin-2 OS=Xenopus tropicalis OX=8364 GN=phb2 PE=2 SV=1	[more]

BLAST of MS003462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYH4	6.3e-86	94.83	Prohibitin OS=Momordica charantia OX=3673 GN=LOC111006615 PE=3 SV=1	[more]
A0A6J1JCS5	2.4e-45	56.74	Prohibitin OS=Cucurbita maxima OX=3661 GN=LOC111483298 PE=3 SV=1	[more]
A0A6J1EVK6	2.4e-45	56.74	Prohibitin OS=Cucurbita moschata OX=3662 GN=LOC111438475 PE=3 SV=1	[more]
A0A6J1BXN0	2.4e-45	57.30	Prohibitin OS=Momordica charantia OX=3673 GN=LOC111006407 PE=3 SV=1	[more]
A0A1S3BVE0	9.2e-45	56.74	Prohibitin OS=Cucumis melo OX=3656 GN=LOC103493907 PE=3 SV=1	[more]

BLAST of MS003462 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40770.1	9.1e-45	53.93	prohibitin 3	[more]
AT3G27280.2	1.8e-40	48.88	prohibitin 4	[more]
AT3G27280.1	1.8e-40	48.88	prohibitin 4	[more]
AT1G03860.1	1.9e-26	39.29	prohibitin 2	[more]
AT1G03860.3	1.9e-26	39.29	prohibitin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000163	Prohibitin	PRINTS	PR00679	PROHIBITIN	coord: 117..135 score: 23.48 coord: 94..113 score: 48.85 coord: 76..92 score: 35.75 coord: 164..178 score: 38.85
IPR000163	Prohibitin	PANTHER	PTHR23222	PROHIBITIN	coord: 1..178
IPR000163	Prohibitin	CDD	cd03401	SPFH_prohibitin	coord: 34..178 e-value: 2.34684E-45 score: 146.119
IPR001107	Band 7 domain	SMART	SM00244	PHB_4	coord: 31..178 e-value: 2.7E-4 score: 30.3
IPR001107	Band 7 domain	PFAM	PF01145	Band_7	coord: 35..168 e-value: 5.6E-11 score: 42.8
None	No IPR available	PANTHER	PTHR23222:SF26	PROHIBITIN-3, MITOCHONDRIAL-LIKE	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003462.1	MS003462.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane