MS003426 (gene) Bitter gourd (TR) v1

Overview


Name	MS003426
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	17.8 kDa class I heat shock protein-like
Location	scaffold234: 2784888 .. 2785361 (-)
RNA-Seq Expression	MS003426
Synteny	MS003426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTTAATCCCTAGTTTCTTCGGTGGCCGGAGGAGCAACGTGTTCGATCCGTTCTCTCTGGACATCTGGGATCCGATGGAAGGGTTATTTCCGTTCACGGGGAAGGCGGCGTCCTCTGGCGGAGACGAGACGGCGGCGGTGGTGAATACTCGGATCGACTGGAGAGAGACGCCGGAGAATCACATATTGAAGGCGGACCTGCCGGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAAGAGGGGCGGGTGCTGAAGATCAGCGGAGAGAGGAGCAGAGAAGAGGAGGAGAAGAGCGACAAATGGCACAGGGTGGAGCGGAGCGTCGGGAAGTTCATGCGGCGGTTCCGGCTGCCGGAGAACGCCAAGATGGAGGAGATCAAGGCCAACATGGAGAACGGAGTGCTGACGGTGATGGTGCCCAAACAGGAGGAGAAGAAGCCCGAGGTCAAGACCATTGAAATCGGCGGT

mRNA sequence

ATGTCGTTAATCCCTAGTTTCTTCGGTGGCCGGAGGAGCAACGTGTTCGATCCGTTCTCTCTGGACATCTGGGATCCGATGGAAGGGTTATTTCCGTTCACGGGGAAGGCGGCGTCCTCTGGCGGAGACGAGACGGCGGCGGTGGTGAATACTCGGATCGACTGGAGAGAGACGCCGGAGAATCACATATTGAAGGCGGACCTGCCGGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAAGAGGGGCGGGTGCTGAAGATCAGCGGAGAGAGGAGCAGAGAAGAGGAGGAGAAGAGCGACAAATGGCACAGGGTGGAGCGGAGCGTCGGGAAGTTCATGCGGCGGTTCCGGCTGCCGGAGAACGCCAAGATGGAGGAGATCAAGGCCAACATGGAGAACGGAGTGCTGACGGTGATGGTGCCCAAACAGGAGGAGAAGAAGCCCGAGGTCAAGACCATTGAAATCGGCGGT

Coding sequence (CDS)

ATGTCGTTAATCCCTAGTTTCTTCGGTGGCCGGAGGAGCAACGTGTTCGATCCGTTCTCTCTGGACATCTGGGATCCGATGGAAGGGTTATTTCCGTTCACGGGGAAGGCGGCGTCCTCTGGCGGAGACGAGACGGCGGCGGTGGTGAATACTCGGATCGACTGGAGAGAGACGCCGGAGAATCACATATTGAAGGCGGACCTGCCGGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAAGAGGGGCGGGTGCTGAAGATCAGCGGAGAGAGGAGCAGAGAAGAGGAGGAGAAGAGCGACAAATGGCACAGGGTGGAGCGGAGCGTCGGGAAGTTCATGCGGCGGTTCCGGCTGCCGGAGAACGCCAAGATGGAGGAGATCAAGGCCAACATGGAGAACGGAGTGCTGACGGTGATGGTGCCCAAACAGGAGGAGAAGAAGCCCGAGGTCAAGACCATTGAAATCGGCGGT

Protein sequence

MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLPENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG

Homology

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BLAST of MS003426 vs. NCBI nr
Match: XP_022134086.1 (17.8 kDa class I heat shock protein-like [Momordica charantia])

HSP 1 Score: 309.3 bits (791), Expect = 1.9e-80
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE 60
           MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE 60

Query: 61  NHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP 120
            HILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP
Sbjct: 61  AHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP 120

Query: 121 ENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           ENAKMEEIKANMENGVLTVMVPKQEEKKPEVK IEIGG
Sbjct: 121 ENAKMEEIKANMENGVLTVMVPKQEEKKPEVKAIEIGG 158

[Close]

BLAST of MS003426 vs. NCBI nr
Match: XP_038892901.1 (18.1 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 252.3 bits (643), Expect = 2.8e-63
Identity = 127/160 (79.38%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAAS--SGGDETAAVVNTRIDWRET 60
           M+LIPS FGGRRSNVFDPFSLDIWDP EG FPF+   A+  S   ET+A  NTRIDW+ET
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEG-FPFSSSLANIPSSARETSAFANTRIDWKET 60

Query: 61  PENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFR 120
           PE HI KADLPG+KKEEVKVEVEEGRVL+ISGERS+E+EEK+DKWHRVERS GKFMRRFR
Sbjct: 61  PEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           LPENAK+EE+KANMENGVLTV VPK EEKKPE+KTI+I G
Sbjct: 121 LPENAKVEEVKANMENGVLTVTVPKMEEKKPEIKTIDISG 159

[Close]

BLAST of MS003426 vs. NCBI nr
Match: XP_023550896.1 (17.6 kDa class I heat shock protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.5 bits (641), Expect = 4.7e-63
Identity = 127/160 (79.38%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGL-FPFT-GKAASSGGDETAAVVNTRIDWRET 60
           MSLIPSF  GRR+NVFDPFSLDIWDP+EG+ FP +  K  SSG  ET A+ NTRIDWRET
Sbjct: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLAKVPSSGAGETTAIANTRIDWRET 60

Query: 61  PENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFR 120
           PE HI KADLPGLKKEEVKVEVEEGRVL+ISGERS+EEEE+++KWHRVERS+GKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           LPENAKM+EI A MENGVLTV VPKQEE+KPEVK I+I G
Sbjct: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 160

[Close]

BLAST of MS003426 vs. NCBI nr
Match: XP_022939316.1 (17.4 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6578434.1 17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 250.8 bits (639), Expect = 8.1e-63
Identity = 127/160 (79.38%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGL-FPFT-GKAASSGGDETAAVVNTRIDWRET 60
           MSLIPSF  GRR+NVFDPFSLDIWDP+EG+ FP +  K  SSG  ET A+ NTRIDWRET
Sbjct: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60

Query: 61  PENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFR 120
           PE HI KADLPGLKKEEVKVEVEEGRVL+ISGERS+EEEE+++KWHRVERS+GKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           LPENAKM+EI A MENGVLTV VPKQEE+KPEVK I+I G
Sbjct: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 160

[Close]

BLAST of MS003426 vs. NCBI nr
Match: XP_022993074.1 (17.6 kDa class I heat shock protein 3-like [Cucurbita maxima])

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-62
Identity = 126/160 (78.75%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGL-FPFT-GKAASSGGDETAAVVNTRIDWRET 60
           MSLIPSFF GRR++VFDPFSLDIWDP+EG+ FP +  K  S G  ET A+ NTRIDWRET
Sbjct: 1   MSLIPSFFSGRRTDVFDPFSLDIWDPLEGMQFPGSLAKVPSFGTGETTAIANTRIDWRET 60

Query: 61  PENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFR 120
           PE HI KADLPGLKKEEVKVEVEEGRVL+ISGERS+E+EE+++KWHRVERS+GKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEDEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           LPENAKM+EI A MENGVLTVMVPKQEE+KPEVK I+I G
Sbjct: 121 LPENAKMDEINAKMENGVLTVMVPKQEERKPEVKAIDIAG 160

[Close]

BLAST of MS003426 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.5e-61
Identity = 116/158 (73.42%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE 60
           MS+IPSFFGGRRSNVFDPFSLD+WDP +  FP    +AS  G ETAA VNT IDW+ETP+
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKD-FPLVTSSASEFGKETAAFVNTHIDWKETPQ 60

Query: 61  NHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP 120
            H+ KADLPGLKKEEVKVE+EEG+VL+ISGER++E+EEK+DKWHRVERS GKF+RRFRLP
Sbjct: 61  AHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLP 120

Query: 121 ENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           ENAK++E+KA M NGV+TV VPK E KKPEVK I+I G
Sbjct: 121 ENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of MS003426 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-60
Identity = 116/159 (72.96%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLF-PFTGKAASSGGDETAAVVNTRIDWRETP 60
           MSLIPS FGGRRSNVFDPFS D+WDP EG F P +  A +S   + AA  N R+DW+ETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  ENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRL 120
           E H+ KADLPGLKKEEVKVEVE+  VL+ISGERS+E EEK+DKWHRVER+ GKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           PENAKMEE+KA MENGVLTV+VPK  EKKP+VK+I+I G
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of MS003426 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.6e-60
Identity = 116/159 (72.96%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAAS-SGGDETAAVVNTRIDWRETP 60
           MSLIPSFFGGRRSNVFDPFSLD+WDP +  FPF   A S S   E +A V+TR+DW+ETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKD-FPFNNSALSASFPRENSAFVSTRVDWKETP 60

Query: 61  ENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRL 120
           E H+ KADLPG+KKEEVKVE+E+ RVL+ISGERS E+E+K+D+WHR+ERS GKFMRRFRL
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           PENAKM+++KA MENGVLTV VPK+E KKPEVKTI+I G
Sbjct: 121 PENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of MS003426 vs. ExPASy Swiss-Prot
Match: P19036 (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 7.3e-59
Identity = 110/158 (69.62%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE 60
           MSL+PSFFGGRR+NVFDPFSLD+WDP EG    T    ++   + AA  N ++DWRETPE
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF--LTPGLTNAPAKDVAAFTNAKVDWRETPE 60

Query: 61  NHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP 120
            H+ KAD+PGLKKEEVKVEVE+G +L+ISGERS E EEKSD WHRVERS GKFMRRFRLP
Sbjct: 61  AHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLP 120

Query: 121 ENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           ENAK+EE+KA+MENGVL+V VPK +E KPEVK+++I G
Sbjct: 121 ENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of MS003426 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 226.5 bits (576), Expect = 2.1e-58
Identity = 114/158 (72.15%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE 60
           MSLIPS FGGRR+NVFDPFSLD++DP EG    +G A +   D  AA  N ++DWRETPE
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMD-VAAFTNAKVDWRETPE 60

Query: 61  NHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP 120
            H+ KADLPGL+KEEVKVEVE+G +L+ISGERS E EEK+DKWHRVERS GKF RRFRLP
Sbjct: 61  AHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLP 120

Query: 121 ENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           ENAKMEEIKA+MENGVL+V VPK  EKKPEVK+I+I G
Sbjct: 121 ENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of MS003426 vs. ExPASy TrEMBL
Match: A0A6J1BWZ6 (17.8 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111006444 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 9.3e-81
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE 60
           MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE 60

Query: 61  NHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP 120
            HILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP
Sbjct: 61  AHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP 120

Query: 121 ENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           ENAKMEEIKANMENGVLTVMVPKQEEKKPEVK IEIGG
Sbjct: 121 ENAKMEEIKANMENGVLTVMVPKQEEKKPEVKAIEIGG 158

[Close]

BLAST of MS003426 vs. ExPASy TrEMBL
Match: A0A6J1FFJ4 (17.4 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111445270 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.9e-63
Identity = 127/160 (79.38%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGL-FPFT-GKAASSGGDETAAVVNTRIDWRET 60
           MSLIPSF  GRR+NVFDPFSLDIWDP+EG+ FP +  K  SSG  ET A+ NTRIDWRET
Sbjct: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60

Query: 61  PENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFR 120
           PE HI KADLPGLKKEEVKVEVEEGRVL+ISGERS+EEEE+++KWHRVERS+GKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           LPENAKM+EI A MENGVLTV VPKQEE+KPEVK I+I G
Sbjct: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 160

[Close]

BLAST of MS003426 vs. ExPASy TrEMBL
Match: A0A6J1JZ77 (17.6 kDa class I heat shock protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489198 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.7e-63
Identity = 126/160 (78.75%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGL-FPFT-GKAASSGGDETAAVVNTRIDWRET 60
           MSLIPSFF GRR++VFDPFSLDIWDP+EG+ FP +  K  S G  ET A+ NTRIDWRET
Sbjct: 1   MSLIPSFFSGRRTDVFDPFSLDIWDPLEGMQFPGSLAKVPSFGTGETTAIANTRIDWRET 60

Query: 61  PENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFR 120
           PE HI KADLPGLKKEEVKVEVEEGRVL+ISGERS+E+EE+++KWHRVERS+GKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEDEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           LPENAKM+EI A MENGVLTVMVPKQEE+KPEVK I+I G
Sbjct: 121 LPENAKMDEINAKMENGVLTVMVPKQEERKPEVKAIDIAG 160

[Close]

BLAST of MS003426 vs. ExPASy TrEMBL
Match: A0A0A0KLU0 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.7e-63
Identity = 123/160 (76.88%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAAS--SGGDETAAVVNTRIDWRET 60
           M+L+PS FGGRRSNVFDPFSLDIWDP EG FPF+   A+  S   ET+A  NTRIDW+ET
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEG-FPFSNSLANAPSSARETSAFANTRIDWKET 60

Query: 61  PENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFR 120
           P+ HI KADLPG+KKEEVKVEVEEGRVL+ISGERS+E+EEK+DKWHR+ERS GKFMRRFR
Sbjct: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRFR 120

Query: 121 LPENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           LPENAK+EE+KA+MENGVLTVMVPK EEKKPE+K+I+I G
Sbjct: 121 LPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of MS003426 vs. ExPASy TrEMBL
Match: A0A7J6EM09 (SHSP domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_005630 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.3e-62
Identity = 120/158 (75.95%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE 60
           MSLIPSFFGGRRSNVFDP SLDIWDP + +F  T     S   ET+A  NTRIDW+ETPE
Sbjct: 1   MSLIPSFFGGRRSNVFDPLSLDIWDPFDDIFSSTRAVVPSSARETSAFANTRIDWKETPE 60

Query: 61  NHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP 120
            H+ KADLPGLKKEEVKVEVEEGRVL+ISGERS+E+EEK+DKWHR+ERS GKF+RRFRLP
Sbjct: 61  AHVFKADLPGLKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRLP 120

Query: 121 ENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           ENAKM+++KAN+ENGVLTV VPK+EEKKPEVK I+I G
Sbjct: 121 ENAKMDQVKANLENGVLTVTVPKEEEKKPEVKPIQITG 158

[Close]

BLAST of MS003426 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 233.8 bits (595), Expect = 9.5e-62
Identity = 116/159 (72.96%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLF-PFTGKAASSGGDETAAVVNTRIDWRETP 60
           MSLIPS FGGRRSNVFDPFS D+WDP EG F P +  A +S   + AA  N R+DW+ETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  ENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRL 120
           E H+ KADLPGLKKEEVKVEVE+  VL+ISGERS+E EEK+DKWHRVER+ GKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           PENAKMEE+KA MENGVLTV+VPK  EKKP+VK+I+I G
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of MS003426 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 228.0 bits (580), Expect = 5.2e-60
Identity = 110/158 (69.62%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE 60
           MSL+PSFFGGRR+NVFDPFSLD+WDP EG    T    ++   + AA  N ++DWRETPE
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF--LTPGLTNAPAKDVAAFTNAKVDWRETPE 60

Query: 61  NHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP 120
            H+ KAD+PGLKKEEVKVEVE+G +L+ISGERS E EEKSD WHRVERS GKFMRRFRLP
Sbjct: 61  AHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLP 120

Query: 121 ENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           ENAK+EE+KA+MENGVL+V VPK +E KPEVK+++I G
Sbjct: 121 ENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of MS003426 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 226.5 bits (576), Expect = 1.5e-59
Identity = 114/158 (72.15%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETPE 60
           MSLIPS FGGRR+NVFDPFSLD++DP EG    +G A +   D  AA  N ++DWRETPE
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMD-VAAFTNAKVDWRETPE 60

Query: 61  NHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRLP 120
            H+ KADLPGL+KEEVKVEVE+G +L+ISGERS E EEK+DKWHRVERS GKF RRFRLP
Sbjct: 61  AHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLP 120

Query: 121 ENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           ENAKMEEIKA+MENGVL+V VPK  EKKPEVK+I+I G
Sbjct: 121 ENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of MS003426 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 7.3e-54
Identity = 106/159 (66.67%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MSLIPSFF-GGRRSNVFDPFSLDIWDPMEGLFPFTGKAASSGGDETAAVVNTRIDWRETP 60
           MS+IPSFF   RRSN+FDPFSLD+WDP + L       +SS   E +A+VN R+DWRETP
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKEL------TSSSLSRENSAIVNARVDWRETP 60

Query: 61  ENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRFRL 120
           E H+ KADLPGLKKEEVKVE+EE  VLKISGER  E+E+K+D WHRVERS G+F RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRL 120

Query: 121 PENAKMEEIKANMENGVLTVMVPKQEEKKPEVKTIEIGG 159
           PEN KM+++KA MENGVLTV VPK E KK +VK+I+I G
Sbjct: 121 PENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of MS003426 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 197.2 bits (500), Expect = 9.9e-51
Identity = 106/163 (65.03%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 1   MSLIPSFFG-GRRSN-VFDPFSLDIWDPMEGL-FPFTGKAASSGGDETAAVVNTRIDWRE 60
           MSLIPSFFG  RRSN +FDPFSLD+WDP + L FP      SS   ET+A+ N R+DW+E
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFP------SSLSGETSAITNARVDWKE 60

Query: 61  TPENHILKADLPGLKKEEVKVEVEEGRVLKISGERSREEEEKSDKWHRVERSVGKFMRRF 120
           T E H+ KADLPG+KKEEVKVE+E+  VLKISGER  E+EEK D WHRVERS G+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 121 RLPENAKMEEIKANMENGVLTVMVPKQEE--KKPEVKTIEIGG 159
           +LPEN KM+++KA+MENGVLTV VPK EE  KK +VK+I+I G
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of MS003426 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134086.1	1.9e-80	98.73	17.8 kDa class I heat shock protein-like [Momordica charantia]	[more]
XP_038892901.1	2.8e-63	79.38	18.1 kDa class I heat shock protein-like [Benincasa hispida]	[more]
XP_023550896.1	4.7e-63	79.38	17.6 kDa class I heat shock protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939316.1	8.1e-63	79.38	17.4 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6578434.1 17.6...	[more]
XP_022993074.1	1.4e-62	78.75	17.6 kDa class I heat shock protein 3-like [Cucurbita maxima]	[more]

BLAST of MS003426 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27396	3.5e-61	73.42	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P19037	1.3e-60	72.96	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27880	6.6e-60	72.96	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P19036	7.3e-59	69.62	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A ...	[more]
P13853	2.1e-58	72.15	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]

BLAST of MS003426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BWZ6	9.3e-81	98.73	17.8 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1FFJ4	3.9e-63	79.38	17.4 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JZ77	6.7e-63	78.75	17.6 kDa class I heat shock protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0KLU0	8.7e-63	76.88	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G197620 PE=3 S...	[more]
A0A7J6EM09	3.3e-62	75.95	SHSP domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_005630 PE=3 S...	[more]

BLAST of MS003426 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	9.5e-62	72.96	heat shock protein 18.2	[more]
AT3G46230.1	5.2e-60	69.62	heat shock protein 17.4	[more]
AT1G53540.1	1.5e-59	72.15	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	7.3e-54	66.67	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	9.9e-51	65.03	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 54..156 e-value: 6.1E-31 score: 106.6
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 44..158 score: 31.393566
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 10..158 e-value: 7.0E-53 score: 180.4
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 22..158
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..158
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..158
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 48..152 score: 8.644437

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003426.1	MS003426.1	mRNA