MS003401 (gene) Bitter gourd (TR) v1

Overview


Name	MS003401
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein yippee-like
Location	scaffold234: 2639752 .. 2641525 (-)
RNA-Seq Expression	MS003401
Synteny	MS003401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGGCTGTTCGTGGTGAGCCTGGAAGGGAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGGTTTTGATACTCAATATCTGTTTCCTTTTTTATTTCTGATCGGATTTTTTTCTATGGATTTTCATAACTTCCCTTTACTCTTTTCTGATGCGATTGACAATATTGATTGACCCTTTACTATGGTGAGAAAAATATGGTGTTTACTATTTGGTTGTTGTTGTTGTTGTTGTTATAGAAGGATCGGCCCCCATCCCCATACCTCTTCTCGGGGCTCTACTTAATTTGGTGATCTATAATTGCAATCAGAAATTTGATTATATATGTTGGCTCTTGCCCTCTGAATATTGATTTTCTGACTGAAAGATACTAGAAATGGCATTGGGGAAGAGTGTTCTGACTTCATTTTTTCCTGTGTTTCTATTATTCAGTCTTTCCAAAGCAGACATGGGAAAGCTTACCTCTTCAATAAAGTGTAAGTTTTCCTAGATGATAGTTGTGTAGTTTGACCAATGTTTCCATTAAATAAATCCCTAATGTCCTTGATTTCTTTCCAATAACAAACTAAGAGAGAGAGGGGACGAAGGTCAAATTCTAACTTGTTCAATCTCTCCCCTTTTCTTCTTGTCATTCTGATTCATACATGTCGACTCCTCTTCCTTCACTATTGTTTTGGTTTTGCATAATTTTAGAAGTGAAGGTTCATCAGTGAGAAACTTTAACGAAGTTCCAAACTTATTTATTCGTTTGCTCTTTAAGATTTGAAGTTAATCTTCGTTTTCTTTTACAGAGTGAATGTAACTATGGGAGCGAAAGAAACAAGAATGATGATGACGGGAATGCATACCGTTGCTGATATCTTCTGTGTTGGCTGTGGATCAATTGTGGGATGGACATATGTAAGATATCGTAAAGCACAAAAGCTTAGAAGTTCTATGCTGTTATTTTCTTCTTTATGACGTCTTCTCTTGGTGGTCTTTGATCATTCACTTCAGGAAACTGCTTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAATCAGTACTTGAGCGGTAAGTAAATATACATCAAATGAGACCCAAATAGATTACAGAGAGCTGCTTTGAATCATTACTTTAGGACTTGAATTGAAGCTACTCAAAGTCCAAAAAGGCACCTCAAATTAATGTTTGGAAAGAACATCTTTCTTAGTTAGTCTAGAAAATGATCTTATTTGGTCCATTTAGTTTAACCCCTCAAGTATAAAAAATGTTTACATGGTTATTTTAACCAGTCTGCCAATAATCATTTAGTCAAAAATATTACATGAGAGATCATGAGACGTGTGTAATAGTTCATGCACTATTTTTTTACAGACATGGTAGACAATAGATTTGCTCTCTCATTAGAGACTAGAGACTAGAAGGAACCTTTTTCCGTAAGAACAGTTCAGATTTTCATTTTTAACATAAAGAAAGTCACTAAAGTCTCTTGATGTTGTTTCAACCATATACTAGTTCCATATCAGACATCTTCAGGAAGATCTCAGTTTTCAACTATAACCGTCCCGACATCGTTCTATTATCACATTGAATATTCATATCTTAGAAGTGTGCAGAGTAGCAATGTTGAATTTGGGAAACATATAAGTTAGTACAAGTTGTATGAACAGGTTCAAGGTGTCAGGCCCTGGTGGAACCAATTACTGGGTCAGTCATGCTCATGAAGCAGCTCATGGTGGAGTAAGTGATGCAGATGAAGCT

mRNA sequence

ATGGGGAGGCTGTTCGTGGTGAGCCTGGAAGGGAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGGTTTTGATACTCAATATCTATACTAGAAATGGCATTGGGGAAGAGTGTTCTGACTTCATTTTTTCCTGTGTTTCTATTATTCAGTCTTTCCAAAGCAGACATGGGAAAGCTTACCTCTTCAATAAAGTAGTGAATGTAACTATGGGAGCGAAAGAAACAAGAATGATGATGACGGGAATGCATACCGTTGCTGATATCTTCTGTGTTGGCTGTGGATCAATTGTGGGATGGACATATGAAACTGCTTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAATCAGTACTTGAGCGGTTCAAGGTGTCAGGCCCTGGTGGAACCAATTACTGGGTCAGTCATGCTCATGAAGCAGCTCATGGTGGAGTAAGTGATGCAGATGAAGCT

Coding sequence (CDS)

ATGGGGAGGCTGTTCGTGGTGAGCCTGGAAGGGAGGATCTATAGCTGCAAGCACTGCCGAACCCATCTTGCTCTTTATGAGGACATCGTTTCCAAGGTTTTGATACTCAATATCTATACTAGAAATGGCATTGGGGAAGAGTGTTCTGACTTCATTTTTTCCTGTGTTTCTATTATTCAGTCTTTCCAAAGCAGACATGGGAAAGCTTACCTCTTCAATAAAGTAGTGAATGTAACTATGGGAGCGAAAGAAACAAGAATGATGATGACGGGAATGCATACCGTTGCTGATATCTTCTGTGTTGGCTGTGGATCAATTGTGGGATGGACATATGAAACTGCTTTTGAAAAGAACCAGAAGTACAAAGAAGGGAAATCAGTACTTGAGCGGTTCAAGGTGTCAGGCCCTGGTGGAACCAATTACTGGGTCAGTCATGCTCATGAAGCAGCTCATGGTGGAGTAAGTGATGCAGATGAAGCT

Protein sequence

MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQSFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQKYKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA

Homology

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BLAST of MS003401 vs. NCBI nr
Match: XP_022133719.1 (protein yippee-like [Momordica charantia])

HSP 1 Score: 261.9 bits (668), Expect = 3.5e-66
Identity = 132/160 (82.50%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK                            
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK
Sbjct: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA 161
           YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA
Sbjct: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA 132

[Close]

BLAST of MS003401 vs. NCBI nr
Match: XP_022923565.1 (protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cucurbita moschata] >XP_022923582.1 protein yippee-like [Cucurbita moschata] >XP_022989912.1 protein yippee-like [Cucurbita maxima] >XP_022989913.1 protein yippee-like [Cucurbita maxima] >XP_022989914.1 protein yippee-like [Cucurbita maxima] >XP_023550465.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550539.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550608.1 protein yippee-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550669.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550750.1 protein yippee-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.7 bits (626), Expect = 2.6e-61
Identity = 126/162 (77.78%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK                            
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQ RHGKAYLFNKVVNVT+G KETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK
Sbjct: 61  SFQCRHGKAYLFNKVVNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHA--HEAAHGGVSDADEA 161
           YKEGKSVLERFKVSGPGGT+YWVSHA  HE AHGG SDADEA
Sbjct: 121 YKEGKSVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 134

[Close]

BLAST of MS003401 vs. NCBI nr
Match: KAG6602621.1 (putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 245.7 bits (626), Expect = 2.6e-61
Identity = 126/162 (77.78%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK                            
Sbjct: 722 MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK---------------------------- 781

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQ RHGKAYLFNKVVNVT+G KETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK
Sbjct: 782 SFQCRHGKAYLFNKVVNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 841

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHA--HEAAHGGVSDADEA 161
           YKEGKSVLERFKVSGPGGT+YWVSHA  HE AHGG SDADEA
Sbjct: 842 YKEGKSVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 855

[Close]

BLAST of MS003401 vs. NCBI nr
Match: XP_038884693.1 (protein yippee-like [Benincasa hispida] >XP_038884694.1 protein yippee-like [Benincasa hispida])

HSP 1 Score: 245.0 bits (624), Expect = 4.5e-61
Identity = 125/162 (77.16%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSK                            
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQSRHGKAYLFNKVVNV++G KETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK
Sbjct: 61  SFQSRHGKAYLFNKVVNVSVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHA--HEAAHGGVSDADEA 161
           YKEGKSVLERFKVSGPGGT+YWVSHA  HE AHGG SDADEA
Sbjct: 121 YKEGKSVLERFKVSGPGGTSYWVSHAHSHETAHGGGSDADEA 134

[Close]

BLAST of MS003401 vs. NCBI nr
Match: XP_004138427.1 (protein yippee-like [Cucumis sativus] >XP_031742575.1 protein yippee-like [Cucumis sativus] >KGN45782.1 hypothetical protein Csa_005069 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-60
Identity = 124/162 (76.54%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSK                            
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQSRHGKAYLFNKVVNV++G KETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK
Sbjct: 61  SFQSRHGKAYLFNKVVNVSVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVS--HAHEAAHGGVSDADEA 161
           YKEGKSVLERFKVSGPGGT+YWVS  H+HE AHGG SDADEA
Sbjct: 121 YKEGKSVLERFKVSGPGGTSYWVSHTHSHETAHGGGSDADEA 134

[Close]

BLAST of MS003401 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 8.5e-47
Identity = 98/159 (61.64%), Postives = 110/159 (69.18%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFV++LEG+IYSCKHC THLAL E+IVSK                            
Sbjct: 1   MGRLFVLTLEGKIYSCKHCGTHLALSENIVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SF  +HGKAYLF+KVVNVT G  E RMMMTGMHTVADIFCV CGSIVGW YETA EK+QK
Sbjct: 61  SFHCKHGKAYLFSKVVNVTSGEIENRMMMTGMHTVADIFCVCCGSIVGWKYETAHEKSQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADE 160
           YKEGKSVLERFK++GP G++YW SH     H   SDAD+
Sbjct: 121 YKEGKSVLERFKITGPDGSHYWASH---DTHVAGSDADD 128

[Close]

BLAST of MS003401 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-46
Identity = 98/160 (61.25%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSK                            
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQSRHGKAYLF+KVVNV  G KE RMMMTGMHTV DI+CV CGS VGW YE AFEKNQK
Sbjct: 61  SFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA 161
           YKEGKSVLER+KV GP G NYWV+   EA   G SD D+A
Sbjct: 121 YKEGKSVLERYKVWGPDGNNYWVAQEVEA---GDSDTDDA 129

[Close]

BLAST of MS003401 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 7.2e-38
Identity = 77/141 (54.61%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFV+ LEG +YSCK+C+TH A+  DI+SK                            
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SF  +HG+AYLF+ VVNVT+G KE R+M+TG HTVADIFCV CGS+VGW YE A++K+QK
Sbjct: 61  SFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQK 113

Query: 121 YKEGKSVLERFKVSGPGGTNY 142
           YKEGK +LERFKV GP G  Y
Sbjct: 121 YKEGKFILERFKVLGPYGGGY 113

[Close]

BLAST of MS003401 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-36
Identity = 79/149 (53.02%), Postives = 97/149 (65.10%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGR+F+V LEG IY CK C+THL+  +DI+SK                            
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQ ++G+AYLFN VVNV++G KE RMM+TG+H V DIFCVGCGS VGW YE A EK+QK
Sbjct: 61  SFQCKNGRAYLFNNVVNVSVGEKEDRMMITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEA 150
           YKEGKSVLE +K+SGP  +N  VS   +A
Sbjct: 121 YKEGKSVLELYKISGPHDSNDLVSDGDDA 121

[Close]

BLAST of MS003401 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.6e-31
Identity = 73/160 (45.62%), Postives = 93/160 (58.13%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGR+F V LEGR Y C+ CRTHLAL +D+VS+                            
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSR---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SF  R GKAYLFN+ VN++MG  E R+M++GMHTVADIFC  CG  VGW YE+A EK QK
Sbjct: 61  SFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIFCCCCGQNVGWKYESAHEKAQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA 161
           YKEGK VLER ++      +   +  +   HG  SD +++
Sbjct: 121 YKEGKFVLERGRIVDEIDLS---TEVYIDTHGSTSDTEDS 129

[Close]

BLAST of MS003401 vs. ExPASy TrEMBL
Match: A0A6J1BWT3 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111006236 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.7e-66
Identity = 132/160 (82.50%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK                            
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK
Sbjct: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA 161
           YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA
Sbjct: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA 132

[Close]

BLAST of MS003401 vs. ExPASy TrEMBL
Match: A0A6J1JRQ1 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111486961 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.3e-61
Identity = 126/162 (77.78%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK                            
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQ RHGKAYLFNKVVNVT+G KETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK
Sbjct: 61  SFQCRHGKAYLFNKVVNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHA--HEAAHGGVSDADEA 161
           YKEGKSVLERFKVSGPGGT+YWVSHA  HE AHGG SDADEA
Sbjct: 121 YKEGKSVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 134

[Close]

BLAST of MS003401 vs. ExPASy TrEMBL
Match: A0A6J1E6I1 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111431212 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.3e-61
Identity = 126/162 (77.78%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK                            
Sbjct: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQ RHGKAYLFNKVVNVT+G KETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK
Sbjct: 61  SFQCRHGKAYLFNKVVNVTVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHA--HEAAHGGVSDADEA 161
           YKEGKSVLERFKVSGPGGT+YWVSHA  HE AHGG SDADEA
Sbjct: 121 YKEGKSVLERFKVSGPGGTSYWVSHARSHEVAHGGGSDADEA 134

[Close]

BLAST of MS003401 vs. ExPASy TrEMBL
Match: A0A0A0KBL4 (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.8e-61
Identity = 124/162 (76.54%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSK                            
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQSRHGKAYLFNKVVNV++G KETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK
Sbjct: 61  SFQSRHGKAYLFNKVVNVSVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVS--HAHEAAHGGVSDADEA 161
           YKEGKSVLERFKVSGPGGT+YWVS  H+HE AHGG SDADEA
Sbjct: 121 YKEGKSVLERFKVSGPGGTSYWVSHTHSHETAHGGGSDADEA 134

[Close]

BLAST of MS003401 vs. ExPASy TrEMBL
Match: A0A1S3B3I1 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.1e-60
Identity = 122/162 (75.31%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVV+LEGRIYSCKHCRTHLALYEDIVSK                            
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           +FQSRHGKAYLFNKVVNV++G KETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK
Sbjct: 61  TFQSRHGKAYLFNKVVNVSVGVKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVS--HAHEAAHGGVSDADEA 161
           YKEGKSVLERFKVSGPGGT+YWVS  H+HE  HGG SDADEA
Sbjct: 121 YKEGKSVLERFKVSGPGGTSYWVSHTHSHETGHGGGSDADEA 134

[Close]

BLAST of MS003401 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 198.4 bits (503), Expect = 4.5e-51
Identity = 101/160 (63.12%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVV+LEG+IYSCKHC+THLA YEDI+SK                            
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SF  +HGKAYLFNKV NV++G  E R+MMTG HTVADIFCV CGSIVGW YETA EKNQK
Sbjct: 61  SFHCKHGKAYLFNKVANVSIGETEERLMMTGKHTVADIFCVSCGSIVGWKYETAHEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA 161
           YKEGKSVLERFK+SGP G+NYWVS      H G SDAD+A
Sbjct: 121 YKEGKSVLERFKISGPDGSNYWVS--SHGRHIGGSDADDA 130

[Close]

BLAST of MS003401 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 187.2 bits (474), Expect = 1.0e-47
Identity = 98/160 (61.25%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSK                            
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQSRHGKAYLF+KVVNV  G KE RMMMTGMHTV DI+CV CGS VGW YE AFEKNQK
Sbjct: 61  SFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQK 120

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA 161
           YKEGKSVLER+KV GP G NYWV+   EA   G SD D+A
Sbjct: 121 YKEGKSVLERYKVWGPDGNNYWVAQEVEA---GDSDTDDA 129

[Close]

BLAST of MS003401 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 187.2 bits (474), Expect = 1.0e-47
Identity = 98/160 (61.25%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLF+V+LEG+ YSCKHC+T+LAL +D+VSK                            
Sbjct: 34  MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSK---------------------------- 93

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SFQSRHGKAYLF+KVVNV  G KE RMMMTGMHTV DI+CV CGS VGW YE AFEKNQK
Sbjct: 94  SFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQK 153

Query: 121 YKEGKSVLERFKVSGPGGTNYWVSHAHEAAHGGVSDADEA 161
           YKEGKSVLER+KV GP G NYWV+   EA   G SD D+A
Sbjct: 154 YKEGKSVLERYKVWGPDGNNYWVAQEVEA---GDSDTDDA 162

[Close]

BLAST of MS003401 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-42
Identity = 84/131 (64.12%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFVV+LEG+IYSCKHC+THLA YEDI+SK                            
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SF  +HGKAYLFNKV NV++G  E R+MMTG HTVADIFCV CGSIVGW YETA EKNQK
Sbjct: 61  SFHCKHGKAYLFNKVANVSIGETEERLMMTGKHTVADIFCVSCGSIVGWKYETAHEKNQK 103

Query: 121 YKEGKSVLERF 132
           YKEGKSVLERF
Sbjct: 121 YKEGKSVLERF 103

[Close]

BLAST of MS003401 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 158.3 bits (399), Expect = 5.1e-39
Identity = 77/141 (54.61%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 1   MGRLFVVSLEGRIYSCKHCRTHLALYEDIVSKVLILNIYTRNGIGEECSDFIFSCVSIIQ 60
           MGRLFV+ LEG +YSCK+C+TH A+  DI+SK                            
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISK---------------------------- 60

Query: 61  SFQSRHGKAYLFNKVVNVTMGAKETRMMMTGMHTVADIFCVGCGSIVGWTYETAFEKNQK 120
           SF  +HG+AYLF+ VVNVT+G KE R+M+TG HTVADIFCV CGS+VGW YE A++K+QK
Sbjct: 61  SFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQK 113

Query: 121 YKEGKSVLERFKVSGPGGTNY 142
           YKEGK +LERFKV GP G  Y
Sbjct: 121 YKEGKFILERFKVLGPYGGGY 113

The following BLAST results are available for this feature:

BLAST of MS003401 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133719.1	3.5e-66	82.50	protein yippee-like [Momordica charantia]	[more]
XP_022923565.1	2.6e-61	77.78	protein yippee-like [Cucurbita moschata] >XP_022923574.1 protein yippee-like [Cu...	[more]
KAG6602621.1	2.6e-61	77.78	putative zinc metalloprotease EGY2, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_038884693.1	4.5e-61	77.16	protein yippee-like [Benincasa hispida] >XP_038884694.1 protein yippee-like [Ben...	[more]
XP_004138427.1	1.0e-60	76.54	protein yippee-like [Cucumis sativus] >XP_031742575.1 protein yippee-like [Cucum...	[more]

BLAST of MS003401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59234	8.5e-47	61.64	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9C777	1.5e-46	61.25	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
Q9SR97	7.2e-38	54.61	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
Q9LY56	1.8e-36	53.02	Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ...	[more]
Q9FN32	6.6e-31	45.63	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]

BLAST of MS003401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BWT3	1.7e-66	82.50	Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111006236 PE=3 SV=1	[more]
A0A6J1JRQ1	1.3e-61	77.78	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111486961 PE=3 SV=1	[more]
A0A6J1E6I1	1.3e-61	77.78	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111431212 PE=3 SV=1	[more]
A0A0A0KBL4	4.8e-61	76.54	Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_6G011570 PE=3 SV=1	[more]
A0A1S3B3I1	3.1e-60	75.31	Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103485564 PE=3 SV=1	[more]

BLAST of MS003401 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40110.1	4.5e-51	63.13	Yippee family putative zinc-binding protein	[more]
AT3G11230.1	1.0e-47	61.25	Yippee family putative zinc-binding protein	[more]
AT3G11230.2	1.0e-47	61.25	Yippee family putative zinc-binding protein	[more]
AT2G40110.2	2.9e-42	64.12	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	5.1e-39	54.61	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 14..133 e-value: 6.3E-13 score: 48.9
None	No IPR available	PANTHER	PTHR13848:SF67	PROTEIN YIPPEE-LIKE	coord: 1..34
None	No IPR available	PANTHER	PTHR13848:SF67	PROTEIN YIPPEE-LIKE	coord: 60..160
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 1..34
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 60..160
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 12..137 score: 38.920437

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003401.1	MS003401.1	mRNA