MS003369 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCAATTCAATCCTGGGTTTCTCAGCACAAACTCACCAGCATTGGTAACTTCTCCTCTCTTTTATCTCCTCCGACGCTTTTCAATTTTATGTTCGTATTTCCTTAAAAGAGATGCTTTACCACTAAAGCTGAAAGGGATGAGAGTGTTAATTTGCAAAATTTATTAGGGATGCAGCAATATATTATAAATTAAAAAAAAAAAAAAAGTTTGGATAAAATTTGGGTGTTTATCTTTATAGGAGCGCTATGGGCATCTGGGATCGGAGCATCACTGGCGTACACCCGATCGAGGACTCCCCTGAAGCCAAGTCTCCGGCTTATACATGCCAGGTATATTTTTATTAATTATATACCCGACAAATATATACAAAATAAAAATTTAGAGCTAATTTCTTTTTATAAAATGGATCGAGAATTTTATTTTACTGAAATTAATGGAAGTTTGTTTTTTGCGTCAGGATGCATGCTCAGGCATTGACGTTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAAGAAAGCCGCCGGCGACCGACCGGAG ATGGAAGCAATTCAATCCTGGGTTTCTCAGCACAAACTCACCAGCATTGGAGCGCTATGGGCATCTGGGATCGGAGCATCACTGGCGTACACCCGATCGAGGACTCCCCTGAAGCCAAGTCTCCGGCTTATACATGCCAGGATGCATGCTCAGGCATTGACGTTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAAGAAAGCCGCCGGCGACCGACCGGAG ATGGAAGCAATTCAATCCTGGGTTTCTCAGCACAAACTCACCAGCATTGGAGCGCTATGGGCATCTGGGATCGGAGCATCACTGGCGTACACCCGATCGAGGACTCCCCTGAAGCCAAGTCTCCGGCTTATACATGCCAGGATGCATGCTCAGGCATTGACGTTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAAGAAAGCCGCCGGCGACCGACCGGAG MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE Homology
BLAST of MS003369 vs. NCBI nr
Match: KAG6578469.1 (hypothetical protein SDJN03_22917, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 140.2 bits (352), Expect = 7.5e-30 Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0
BLAST of MS003369 vs. NCBI nr
Match: KAG7016034.1 (BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 140.2 bits (352), Expect = 7.5e-30 Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0
BLAST of MS003369 vs. NCBI nr
Match: XP_004138401.1 (uncharacterized protein LOC101218681 [Cucumis sativus] >KGN45820.1 hypothetical protein Csa_005574 [Cucumis sativus]) HSP 1 Score: 137.1 bits (344), Expect = 6.3e-29 Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 0
BLAST of MS003369 vs. NCBI nr
Match: KAA0052029.1 (respiratory supercomplex factor 2-like protein [Cucumis melo var. makuwa] >TYK04531.1 respiratory supercomplex factor 2-like protein-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28 Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 0
BLAST of MS003369 vs. NCBI nr
Match: XP_038886475.1 (uncharacterized protein LOC120076661 [Benincasa hispida]) HSP 1 Score: 134.8 bits (338), Expect = 3.1e-28 Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0
BLAST of MS003369 vs. ExPASy TrEMBL
Match: A0A0A0K7T4 (HIG1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013920 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.1e-29 Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 0
BLAST of MS003369 vs. ExPASy TrEMBL
Match: A0A5A7UEZ1 (Respiratory supercomplex factor 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001530 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 5.2e-29 Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 0
BLAST of MS003369 vs. ExPASy TrEMBL
Match: A0A7J7I509 (HIG1 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_000926 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.9e-27 Identity = 63/70 (90.00%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of MS003369 vs. ExPASy TrEMBL
Match: A0A5J5AU49 (HIG1 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_031517 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26 Identity = 62/71 (87.32%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of MS003369 vs. ExPASy TrEMBL
Match: A0A2R6RWM7 (HIG1 domain family member 1B like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc01526 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.9e-26 Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 0
BLAST of MS003369 vs. TAIR 10
Match: AT3G05550.1 (Hypoxia-responsive family protein ) HSP 1 Score: 85.1 bits (209), Expect = 2.7e-17 Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of MS003369 vs. TAIR 10
Match: AT5G27760.1 (Hypoxia-responsive family protein ) HSP 1 Score: 83.2 bits (204), Expect = 1.0e-16 Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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