MS003055 (gene) Bitter gourd (TR) v1

Overview


Name	MS003055
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CASP-like protein
Location	scaffold234: 187917 .. 189635 (-)
RNA-Seq Expression	MS003055
Synteny	MS003055

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCTCGAAAGGTTCAAGAATTGCTTCACTTATATTAAGAATTCTGACTTTTGTTTTGATCTTCATTTCTCTGTTAATCATCGCCACCAATTCTAAAACCGTGCTCAAAGGAACTGAAGCCGAAGCAAAAGTTGAGTTTAAAGATGTTTATTCCTATCGGTAAGCAATCAATAATTCTTCACTAATTTTTTTTTCTTTCTTTCTTTCTTTTTGAAATTAATCTATAAGTGATGATCTTGATTATGTTTTTATAATTAGTTAAAATTATGTGAAGGTACTTGACGGCAGCTGCTGTTATAGGAGCTGCTTTGAGTTTGTTGCAAATTGCTCTCACCCTTTACCATGTCGTTACCAAAAGTGATGGAACTCCCTTCTTCGATATGTTCAGTGATAAGGTATTTTTCTTAATCCATAGGATTTTGATTAATTTCTCAGGTGTGGGACGTTCATCCTCATTTCCTCTTTTATTGATAAGTTTTTCATTCGGCCACTTCAAAAATATTTGAATTCTTAACCAAATTTCATAAAAGAAATTAAAGTTACTAGTTTTCTTAATTTTACTTAACTTTTGAAAATATTTATCCTATCAAGATAAATGAAGATACAATACAATGTTTTTAAGTTTAATTTTTATAGACCGAAATTAAAAATGAAATTGTTTTCAACAATCTTAAACATGAATAAACCACCGCTATTTTGATATCTAATACAAAACTTAACAAGTAGAAATCATAATAAATGAATAAATCGTCACTCAATTCAAAAGTTTAAGTAGATAGATTTGATAAATTTAATTCATATATTAAATATCTAATACTCCTCTTATTAGTGTTTAAAGAGTATTAGCATCAGGGATCCTCAAACAAACAAAGGAGTATTAGTATTTAGTATAATAATAATTAAGAAGAAAAAGTTCATTCATATGAGACAGTTAATTTTGTTTTATTTATTTATTTAGTTGAGCGAATTTAATTTTGTTTATTAGTTCCTGGATTTTGACGTTATACTATGAATAATTATCATAGAAAATATCGAAAATAGAGCAACAAATTGATGAAAAGGAAAGTGCCGTGGGGATAAGAGCTGAGTGTGTGTAGGGTCGTTGACTTCAATTTTTCGATTTCTTCCACATATTCCCTTCAAGAAATAGGGATACAATATTAAAAAATATATTTCTATCTAAAAAAGTTTTATCTTTCTCGGGTGTGTGTTTTTTTCTGTTTTATTTGTCAACTGAAAAGAAATAGAAATATAATTCCATTTAATATTTTTAAATTTTATTTCAAAGAAACTCAAATGTTTTACGAGAAAATTTTGATTTATTTTCTTTAAATTAATTGAAATTATTATGCAATCTTTTACCTTATGCATTGATTTGAGTGGAAGAAACAAAAAAATAAATAAATTCGTATATAGTTTTTAGAACATTGACGAAATATTATTTATTCATATCATCAGAAACAAGAAATATAAATGTTATCAAACATAACTAACGCGAGTTTGTATACAGTTCTTGACGTACCTTTTATTATCGGGCGCCTCGGCGGGACTGGGCGCTGGAATCGATCTGAGATCGAACTATAAAGATCTAGTTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAGTGCCTCAGCTGCTATTCTTCTCCTTGCCTTTATTTGCAGTGCCGTCGTCTCTATTCTCTCTTCCTTGGCCCTCGTCAGAAAACCC

mRNA sequence

ATGGCAGCCTCGAAAGGTTCAAGAATTGCTTCACTTATATTAAGAATTCTGACTTTTGTTTTGATCTTCATTTCTCTGTTAATCATCGCCACCAATTCTAAAACCGTGCTCAAAGGAACTGAAGCCGAAGCAAAAGTTGAGTTTAAAGATGTTTATTCCTATCGGTACTTGACGGCAGCTGCTGTTATAGGAGCTGCTTTGAGTTTGTTGCAAATTGCTCTCACCCTTTACCATGTCGTTACCAAAAGTGATGGAACTCCCTTCTTCGATATGTTCAGTGATAAGTTCTTGACGTACCTTTTATTATCGGGCGCCTCGGCGGGACTGGGCGCTGGAATCGATCTGAGATCGAACTATAAAGATCTAGTTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAGTGCCTCAGCTGCTATTCTTCTCCTTGCCTTTATTTGCAGTGCCGTCGTCTCTATTCTCTCTTCCTTGGCCCTCGTCAGAAAACCC

Coding sequence (CDS)

ATGGCAGCCTCGAAAGGTTCAAGAATTGCTTCACTTATATTAAGAATTCTGACTTTTGTTTTGATCTTCATTTCTCTGTTAATCATCGCCACCAATTCTAAAACCGTGCTCAAAGGAACTGAAGCCGAAGCAAAAGTTGAGTTTAAAGATGTTTATTCCTATCGGTACTTGACGGCAGCTGCTGTTATAGGAGCTGCTTTGAGTTTGTTGCAAATTGCTCTCACCCTTTACCATGTCGTTACCAAAAGTGATGGAACTCCCTTCTTCGATATGTTCAGTGATAAGTTCTTGACGTACCTTTTATTATCGGGCGCCTCGGCGGGACTGGGCGCTGGAATCGATCTGAGATCGAACTATAAAGATCTAGTTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAGTGCCTCAGCTGCTATTCTTCTCCTTGCCTTTATTTGCAGTGCCGTCGTCTCTATTCTCTCTTCCTTGGCCCTCGTCAGAAAACCC

Protein sequence

MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYKDLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP

Homology

[Close]

BLAST of MS003055 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYK 120
           AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDK LTYLLLSGASAGLGAGIDLRSNYK
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
           DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of MS003055 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 246.9 bits (629), Expect = 1.2e-61
Identity = 132/161 (81.99%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 3   ASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAV 62
           ASKGSRIASLILRILTF+LIF++LLIIATNSKTVL+GT  E K+EFKDV SYRYL A AV
Sbjct: 2   ASKGSRIASLILRILTFILIFVALLIIATNSKTVLEGTVNETKIEFKDVNSYRYLVAVAV 61

Query: 63  IGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYKDL 122
           IG ALSLLQIA T+YH+VTK DGTP FD+FSDK L+YLLLSGASAGLGAGID+R N+K+L
Sbjct: 62  IGGALSLLQIAFTIYHLVTKGDGTPLFDLFSDKLLSYLLLSGASAGLGAGIDMRVNFKEL 121

Query: 123 VGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
           VGN FNSFFDKGSA+AAILLLAFIC+A+VSILSSLAL+RKP
Sbjct: 122 VGNFFNSFFDKGSAAAAILLLAFICAAIVSILSSLALIRKP 162

[Close]

BLAST of MS003055 vs. NCBI nr
Match: XP_022990642.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 4.9e-55
Identity = 126/163 (77.30%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           M  SKGSRIASLILRILTF+LIFISLLI ATNSKT+ KG E E K +FKDVYSYRYL + 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYK 120
            +IGA LSLLQIAL +Y+VVTKS  T  FDMFSDK L+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
           +LVGN+ NSF DKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of MS003055 vs. NCBI nr
Match: XP_023525049.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.2 bits (570), Expect = 8.3e-55
Identity = 125/163 (76.69%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           M  SKGSRIASLILRILTF+LIFISL+I ATNSKT  KG + E K +FKDVYSYRYL + 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLIST 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYK 120
            +IGA LSLLQIAL +Y+VVTKS  T  FDMFSDK L+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  MIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
           +LVGN+ NSFFDKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of MS003055 vs. NCBI nr
Match: XP_022954145.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54
Identity = 126/163 (77.30%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           M  SKGSRIASLILRILTF+LIFISL+I ATNSKT  KG E E   +FKDVYSYRYL + 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYK 120
            VIGA LSLLQIAL +Y+VVTKS  T  FDMFSDK L+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
           +LVGN+ NSFFDKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of MS003055 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.1e-28
Identity = 76/164 (46.34%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 4   SKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVI 63
           S  SR+A+LILRILTF+ +  SL+I+ TN+ T L+    E KV FKDVY+YRY+ A  VI
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTAT-LELDLVEVKVHFKDVYAYRYMLATIVI 66

Query: 64  GAALSLLQIALTLYHVVT-----KSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSN 123
           G A ++LQIA TLY+V T       DG   FD F DK ++Y+L++GA+AG  +  D++  
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPV 126

Query: 124 YKDLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
           +       F++F +KG ASA++LL+ F+C+AV+S+ SS AL ++
Sbjct: 127 FSG--SGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYALPKQ 167

[Close]

BLAST of MS003055 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26
Identity = 74/167 (44.31%), Postives = 107/167 (64.07%), Query Frame = 0


Query: 2   AASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAA 61
           A S  SR+ +L LR+LTF  + +SL+I+ TN+ T+  G + E KV  KD YSYRY+ AA 
Sbjct: 14  APSMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGID-EFKVRSKDFYSYRYMLAAI 73

Query: 62  VIGAALSLLQIALTLYHV------VTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDL 121
             G   ++LQIALTL H+       T  DG   FD + DK ++Y+L +GA+A  GA  +L
Sbjct: 74  AFGLTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKEL 133

Query: 122 RSNYKDLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
           ++    L G   + FF+KG ASA++LLL F+C+A++S+ SS AL +K
Sbjct: 134 KTQLAGLGG---DKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of MS003055 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 72/168 (42.86%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 2   AASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVE--FKDVYSYRYLTA 61
           ++S GSR   L+LR+LTFV + I+L++IA     ++K T+ E  VE  F D+Y+YRY+ +
Sbjct: 12  SSSTGSRTVLLLLRVLTFVFLLIALILIA-----IVKQTDDETGVEIKFNDIYAYRYMIS 71

Query: 62  AAVIGAALSLLQIALTLYHVVT-----KSDGTPFFDMFSDKFLTYLLLSGASAGLGAGID 121
             +IG A +LLQ+AL+++ VV+       DG   FD F DK ++YLL+SG++AG G  ++
Sbjct: 72  TIIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVE 131

Query: 122 LRSNYKDLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
           L        G   NSF DK +ASA++LL+AF+ +AV S  +S AL +K
Sbjct: 132 LGR------GVPSNSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of MS003055 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.3e-21
Identity = 64/161 (39.75%), Postives = 102/161 (63.35%), Query Frame = 0


Query: 8   RIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGAAL 67
           ++  L+LR+LT V + I+L+I++TNS T++    A  K  FKDVY+YRY+ +AAVIG   
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSA-LKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALTLYHVVT--KSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYKDLVG- 127
           +++Q+  T+    T  K+      D + DK ++YL+ +G++AG G   DL+  +  LV  
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
              +  + FF KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of MS003055 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-20
Identity = 65/162 (40.12%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 8   RIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGAAL 67
           R   L+LR+LT   + I++++I+TN+ T L+ +    K+ F DVY+YRY+ +AAVIG   
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVT-LEISSTSIKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALTLYHVVTKSDG--TPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYKDLV-- 127
           +++Q+ LT+    T      T  FD + DK ++YLL +G++AG G   DL+  Y  L+  
Sbjct: 74  AVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEF 133

Query: 128 --GNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
              +  + FF KG ASA++LL AF+  AV+S+ SSLAL ++P
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of MS003055 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.8e-75
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYK 120
           AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDK LTYLLLSGASAGLGAGIDLRSNYK
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
           DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of MS003055 vs. ExPASy TrEMBL
Match: A0A6J1JJD2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.4e-55
Identity = 126/163 (77.30%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           M  SKGSRIASLILRILTF+LIFISLLI ATNSKT+ KG E E K +FKDVYSYRYL + 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYK 120
            +IGA LSLLQIAL +Y+VVTKS  T  FDMFSDK L+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
           +LVGN+ NSF DKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of MS003055 vs. ExPASy TrEMBL
Match: A0A6J1GRM4 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.3e-55
Identity = 126/163 (77.30%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           M  SKGSRIASLILRILTF+LIFISL+I ATNSKT  KG E E   +FKDVYSYRYL + 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYK 120
            VIGA LSLLQIAL +Y+VVTKS  T  FDMFSDK L+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
           +LVGN+ NSFFDKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of MS003055 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 9.0e-55
Identity = 119/163 (73.01%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           MAASKGSRIASLILRILTF+LIFISL+I ATNSKT+ KGTE EAK+EFK+VYSYRYL AA
Sbjct: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYK 120
           AVIG  LSL+QI L++YH+VTKS+GTP F +FSD  L+YLLLS +SA LGAGID+R+N K
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
           +L G +F+SFFD+GS +AA+L +AF+C+AVVSILS+LAL+RKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of MS003055 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.7e-53
Identity = 118/163 (72.39%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           MAASKGSRIA+LILRILT +LIFISL+I A+NSKT+ KGTE EAK+EFK+VYSYRYL AA
Sbjct: 1   MAASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYK 120
           AVIG  LSL+QI L++YH+VTKS+GTP F +FSD  L+YLLLS +SA LGAGID R+N K
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
           +L G +F+SFFD+GS +AA+LL+AFIC+AVVSILS+LAL+RKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRKP 163

[Close]

BLAST of MS003055 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 102.1 bits (253), Expect = 4.5e-22
Identity = 64/161 (39.75%), Postives = 102/161 (63.35%), Query Frame = 0


Query: 8   RIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGAAL 67
           ++  L+LR+LT V + I+L+I++TNS T++    A  K  FKDVY+YRY+ +AAVIG   
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSA-LKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALTLYHVVT--KSDGTPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYKDLVG- 127
           +++Q+  T+    T  K+      D + DK ++YL+ +G++AG G   DL+  +  LV  
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
              +  + FF KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of MS003055 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 101.3 bits (251), Expect = 7.6e-22
Identity = 65/162 (40.12%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 8   RIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGAAL 67
           R   L+LR+LT   + I++++I+TN+ T L+ +    K+ F DVY+YRY+ +AAVIG   
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVT-LEISSTSIKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALTLYHVVTKSDG--TPFFDMFSDKFLTYLLLSGASAGLGAGIDLRSNYKDLV-- 127
           +++Q+ LT+    T      T  FD + DK ++YLL +G++AG G   DL+  Y  L+  
Sbjct: 74  AVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEF 133

Query: 128 --GNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
              +  + FF KG ASA++LL AF+  AV+S+ SSLAL ++P
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

The following BLAST results are available for this feature:

BLAST of MS003055 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134193.1	1.6e-74	99.39	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_038877614.1	1.2e-61	81.99	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_022990642.1	4.9e-55	77.30	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_023525049.1	8.3e-55	76.69	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022954145.1	1.1e-54	77.30	CASP-like protein 4D1 [Cucurbita moschata]	[more]

BLAST of MS003055 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	4.1e-28	46.34	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
B9NBE5	2.2e-26	44.31	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
C6T1Z6	1.3e-23	42.86	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q56X75	6.3e-21	39.75	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
Q8GWD5	1.1e-20	40.12	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]

BLAST of MS003055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1A4	7.8e-75	99.39	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]
A0A6J1JJD2	2.4e-55	77.30	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1	[more]
A0A6J1GRM4	5.3e-55	77.30	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1	[more]
A0A6J1HET3	9.0e-55	73.01	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1	[more]
A0A6J1JSF8	1.7e-53	72.39	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1	[more]

BLAST of MS003055 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	4.5e-22	39.75	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	7.6e-22	40.12	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..147 e-value: 1.3E-25 score: 89.9
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..162
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 4..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003055.1	MS003055.1	mRNA