MS002985 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGCAGCTGCTGCATGTGCCACGCGCTGAAGCGGCTGCTGTGCGGGATGGGGGTGAACCCGACGGTCTACGAGCTCGACCACGACCCGAGAGGGAAGGAGATTGAGAGGGCCTTGATGAGGCTGATCGGAGCTTCGTCGCCGGCGGTTCCCGTCGTGTTCATCGGGGGGAAGCTGGTGGGGTCAATGGATAGAGTCATGGCTTCTCATATCAATGGCACTTTGGTTCCTCTTCTCAAGGACGCAGGAGCCTTGTGGCTC AGCAGCTGCTGCATGTGCCACGCGCTGAAGCGGCTGCTGTGCGGGATGGGGGTGAACCCGACGGTCTACGAGCTCGACCACGACCCGAGAGGGAAGGAGATTGAGAGGGCCTTGATGAGGCTGATCGGAGCTTCGTCGCCGGCGGTTCCCGTCGTGTTCATCGGGGGGAAGCTGGTGGGGTCAATGGATAGAGTCATGGCTTCTCATATCAATGGCACTTTGGTTCCTCTTCTCAAGGACGCAGGAGCCTTGTGGCTC AGCAGCTGCTGCATGTGCCACGCGCTGAAGCGGCTGCTGTGCGGGATGGGGGTGAACCCGACGGTCTACGAGCTCGACCACGACCCGAGAGGGAAGGAGATTGAGAGGGCCTTGATGAGGCTGATCGGAGCTTCGTCGCCGGCGGTTCCCGTCGTGTTCATCGGGGGGAAGCTGGTGGGGTCAATGGATAGAGTCATGGCTTCTCATATCAATGGCACTTTGGTTCCTCTTCTCAAGGACGCAGGAGCCTTGTGGCTC SSCCMCHALKRLLCGMGVNPTVYELDHDPRGKEIERALMRLIGASSPAVPVVFIGGKLVGSMDRVMASHINGTLVPLLKDAGALWL Homology
BLAST of MS002985 vs. NCBI nr
Match: XP_038875997.1 (glutaredoxin-C1-like [Benincasa hispida]) HSP 1 Score: 172.9 bits (437), Expect = 1.2e-39 Identity = 81/86 (94.19%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of MS002985 vs. NCBI nr
Match: NP_001295802.1 (glutaredoxin-C1-like [Cucumis sativus] >AGX01499.1 glutaredoxin [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 2.6e-39 Identity = 80/86 (93.02%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of MS002985 vs. NCBI nr
Match: XP_008459889.1 (PREDICTED: glutaredoxin-C1-like [Cucumis melo] >KAA0039838.1 glutaredoxin-C1-like [Cucumis melo var. makuwa] >TYK24661.1 glutaredoxin-C1-like [Cucumis melo var. makuwa]) HSP 1 Score: 171.8 bits (434), Expect = 2.6e-39 Identity = 80/86 (93.02%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of MS002985 vs. NCBI nr
Match: XP_023004310.1 (glutaredoxin-C1-like [Cucurbita maxima]) HSP 1 Score: 170.6 bits (431), Expect = 5.8e-39 Identity = 79/86 (91.86%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of MS002985 vs. NCBI nr
Match: KAG6592808.1 (Glutaredoxin-C1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 169.9 bits (429), Expect = 9.9e-39 Identity = 79/86 (91.86%), Postives = 84/86 (97.67%), Query Frame = 0
BLAST of MS002985 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 2.4e-35 Identity = 71/92 (77.17%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of MS002985 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2) HSP 1 Score: 145.2 bits (365), Expect = 3.4e-34 Identity = 68/89 (76.40%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of MS002985 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 6.6e-30 Identity = 60/86 (69.77%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of MS002985 vs. ExPASy Swiss-Prot
Match: Q8LF89 (Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 6.6e-30 Identity = 65/92 (70.65%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of MS002985 vs. ExPASy Swiss-Prot
Match: Q96305 (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2) HSP 1 Score: 129.8 bits (325), Expect = 1.5e-29 Identity = 65/90 (72.22%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of MS002985 vs. ExPASy TrEMBL
Match: U3RGD6 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX7 PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39 Identity = 80/86 (93.02%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of MS002985 vs. ExPASy TrEMBL
Match: A0A5D3DM35 (Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002110 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39 Identity = 80/86 (93.02%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of MS002985 vs. ExPASy TrEMBL
Match: A0A1S3CBP1 (glutaredoxin-C1-like OS=Cucumis melo OX=3656 GN=LOC103498872 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39 Identity = 80/86 (93.02%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of MS002985 vs. ExPASy TrEMBL
Match: A0A6J1KU84 (glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111497671 PE=3 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 2.8e-39 Identity = 79/86 (91.86%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of MS002985 vs. ExPASy TrEMBL
Match: A0A6J1H7D3 (glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111461103 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 4.8e-39 Identity = 79/86 (91.86%), Postives = 84/86 (97.67%), Query Frame = 0
BLAST of MS002985 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein ) HSP 1 Score: 131.0 bits (328), Expect = 4.7e-31 Identity = 65/92 (70.65%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of MS002985 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein ) HSP 1 Score: 129.8 bits (325), Expect = 1.1e-30 Identity = 65/90 (72.22%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of MS002985 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein ) HSP 1 Score: 114.8 bits (286), Expect = 3.5e-26 Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of MS002985 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein ) HSP 1 Score: 110.2 bits (274), Expect = 8.6e-25 Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of MS002985 vs. TAIR 10
Match: AT4G15670.1 (Thioredoxin superfamily protein ) HSP 1 Score: 108.2 bits (269), Expect = 3.3e-24 Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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