![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS002983 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTGAAGGCGAAGAACAAGGGGCTGATCTTGAAAACGTGGGAGCGGTGCAAGTCGATCGGGCGAGGGCGGAGAAGCTCGGCGTCGGGCGGAATAAAGCGGTTCCTGACGAGGAAGACGAAGTCGTGGCCGCGGCTGGAGGCGGAGGAGGCGGCGGAGGAGAAGCGGAGGCGGCGGAGAGTGGCGCCGGAAGGGTGTTTCACGGTGTACGTCGGAGCGGAGAGGCAGAGATTTGTGGTGAAAACAGAGAGCGCGAATCATCCTCTGTTCAGAATGCTGCTGGAGGAGGCGGAGGCGGAGTACGGGTTCAACAGCCAGGCGCCGCTGTGGCTGCCGTGCCACGTCGACAGCTTTTACAGAGTGTTGACGGAGATGGACGCCGCCGATCTCCGCCGTGGGTACCCTAAGCGACTTGGATCTTATCACCAACTCAGCCCCCCTTCTTCCCTCGCTCTAAAT ATGGATGTGAAGGCGAAGAACAAGGGGCTGATCTTGAAAACGTGGGAGCGGTGCAAGTCGATCGGGCGAGGGCGGAGAAGCTCGGCGTCGGGCGGAATAAAGCGGTTCCTGACGAGGAAGACGAAGTCGTGGCCGCGGCTGGAGGCGGAGGAGGCGGCGGAGGAGAAGCGGAGGCGGCGGAGAGTGGCGCCGGAAGGGTGTTTCACGGTGTACGTCGGAGCGGAGAGGCAGAGATTTGTGGTGAAAACAGAGAGCGCGAATCATCCTCTGTTCAGAATGCTGCTGGAGGAGGCGGAGGCGGAGTACGGGTTCAACAGCCAGGCGCCGCTGTGGCTGCCGTGCCACGTCGACAGCTTTTACAGAGTGTTGACGGAGATGGACGCCGCCGATCTCCGCCGTGGGTACCCTAAGCGACTTGGATCTTATCACCAACTCAGCCCCCCTTCTTCCCTCGCTCTAAAT ATGGATGTGAAGGCGAAGAACAAGGGGCTGATCTTGAAAACGTGGGAGCGGTGCAAGTCGATCGGGCGAGGGCGGAGAAGCTCGGCGTCGGGCGGAATAAAGCGGTTCCTGACGAGGAAGACGAAGTCGTGGCCGCGGCTGGAGGCGGAGGAGGCGGCGGAGGAGAAGCGGAGGCGGCGGAGAGTGGCGCCGGAAGGGTGTTTCACGGTGTACGTCGGAGCGGAGAGGCAGAGATTTGTGGTGAAAACAGAGAGCGCGAATCATCCTCTGTTCAGAATGCTGCTGGAGGAGGCGGAGGCGGAGTACGGGTTCAACAGCCAGGCGCCGCTGTGGCTGCCGTGCCACGTCGACAGCTTTTACAGAGTGTTGACGGAGATGGACGCCGCCGATCTCCGCCGTGGGTACCCTAAGCGACTTGGATCTTATCACCAACTCAGCCCCCCTTCTTCCCTCGCTCTAAAT MDVKAKNKGLILKTWERCKSIGRGRRSSASGGIKRFLTRKTKSWPRLEAEEAAEEKRRRRRVAPEGCFTVYVGAERQRFVVKTESANHPLFRMLLEEAEAEYGFNSQAPLWLPCHVDSFYRVLTEMDAADLRRGYPKRLGSYHQLSPPSSLALN Homology
BLAST of MS002983 vs. NCBI nr
Match: XP_022148913.1 (auxin-responsive protein SAUR71-like [Momordica charantia]) HSP 1 Score: 314.7 bits (805), Expect = 4.4e-82 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of MS002983 vs. NCBI nr
Match: KAG6576118.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014637.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 215.3 bits (547), Expect = 3.7e-52 Identity = 118/165 (71.52%), Postives = 125/165 (75.76%), Query Frame = 0
BLAST of MS002983 vs. NCBI nr
Match: KAG6592807.1 (Auxin-responsive protein SAUR71, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 214.2 bits (544), Expect = 8.2e-52 Identity = 118/166 (71.08%), Postives = 131/166 (78.92%), Query Frame = 0
BLAST of MS002983 vs. NCBI nr
Match: XP_023547520.1 (uncharacterized protein LOC111806437 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.2 bits (544), Expect = 8.2e-52 Identity = 117/165 (70.91%), Postives = 125/165 (75.76%), Query Frame = 0
BLAST of MS002983 vs. NCBI nr
Match: XP_023004895.1 (auxin-responsive protein SAUR36-like [Cucurbita maxima]) HSP 1 Score: 213.0 bits (541), Expect = 1.8e-51 Identity = 117/166 (70.48%), Postives = 130/166 (78.31%), Query Frame = 0
BLAST of MS002983 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11 Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 0
BLAST of MS002983 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of MS002983 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 4.0e-09 Identity = 31/66 (46.97%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of MS002983 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09 Identity = 36/99 (36.36%), Postives = 52/99 (52.53%), Query Frame = 0
BLAST of MS002983 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.9e-07 Identity = 26/63 (41.27%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of MS002983 vs. ExPASy TrEMBL
Match: A0A6J1D5E1 (auxin-responsive protein SAUR71-like OS=Momordica charantia OX=3673 GN=LOC111017463 PE=3 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 2.1e-82 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of MS002983 vs. ExPASy TrEMBL
Match: A0A6J1KVV9 (auxin-responsive protein SAUR36-like OS=Cucurbita maxima OX=3661 GN=LOC111498073 PE=3 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 8.8e-52 Identity = 117/166 (70.48%), Postives = 130/166 (78.31%), Query Frame = 0
BLAST of MS002983 vs. ExPASy TrEMBL
Match: A0A6J1GPI0 (uncharacterized protein LOC111456287 OS=Cucurbita moschata OX=3662 GN=LOC111456287 PE=3 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 8.8e-52 Identity = 117/165 (70.91%), Postives = 124/165 (75.15%), Query Frame = 0
BLAST of MS002983 vs. ExPASy TrEMBL
Match: A0A6J1HAW5 (uncharacterized protein LOC111461130 OS=Cucurbita moschata OX=3662 GN=LOC111461130 PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51 Identity = 117/166 (70.48%), Postives = 130/166 (78.31%), Query Frame = 0
BLAST of MS002983 vs. ExPASy TrEMBL
Match: A0A0A0KC76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G092560 PE=3 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49 Identity = 117/162 (72.22%), Postives = 128/162 (79.01%), Query Frame = 0
BLAST of MS002983 vs. TAIR 10
Match: AT5G50760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19 Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of MS002983 vs. TAIR 10
Match: AT1G56150.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 71.2 bits (173), Expect = 8.0e-13 Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 0
BLAST of MS002983 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12 Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 0
BLAST of MS002983 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 67.8 bits (164), Expect = 8.8e-12 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of MS002983 vs. TAIR 10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11 Identity = 37/90 (41.11%), Postives = 49/90 (54.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|