MS002946 (gene) Bitter gourd (TR) v1

Overview


Name	MS002946
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	serine/threonine-protein kinase pakD isoform X1
Location	scaffold595_1: 247397 .. 247993 (+)
RNA-Seq Expression	MS002946
Synteny	MS002946

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAGCCATGGTATCAAAGAGCAATGGAAATAGTGGGAAGAACTCAATGGAAAACAACTCCAAAATCCAAAGAATTCACAATTCCAACTGCAAATTCTTCAAATGGGGCATTCAATTCCAAGGGAAATGAATTCCCAAGATCAATTGGTAATAACAATTCCCACAAACAACACAACAAGATGAGAAAATGCACTTCTCTCAAGATTGCAACTTCATTCACAAGAGTTTGTCTTTGTGCACCAATTTCTTCTTACAATGAAATTTTCCAAGCTGAGATTAACCCGCCCAGGCGAAGCCATAGCTATCCAAGATCCTCCAAGCCCTTTCCGACCCATAACAACATCGCACAAGAAAGAGTTTCGAATTTCTCGAGCGCGCGAGCTAGCGGTGGGGAAATTAGTAGCCGAAGGTTCTTTCGGGGAAAGTCGCTCACCGACGACGTTTTGATGCGGAGATTCGTCGTCGAAGAAGAGGCGATGATGCATGTGAGGAGGAGGAACCAAATGGAAGTTATAAGGAAGAGGAGTTTGATGAGAAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTGATAGCTGAGGAAGAACAA

mRNA sequence

AGGAAGCCATGGTATCAAAGAGCAATGGAAATAGTGGGAAGAACTCAATGGAAAACAACTCCAAAATCCAAAGAATTCACAATTCCAACTGCAAATTCTTCAAATGGGGCATTCAATTCCAAGGGAAATGAATTCCCAAGATCAATTGGTAATAACAATTCCCACAAACAACACAACAAGATGAGAAAATGCACTTCTCTCAAGATTGCAACTTCATTCACAAGAGTTTGTCTTTGTGCACCAATTTCTTCTTACAATGAAATTTTCCAAGCTGAGATTAACCCGCCCAGGCGAAGCCATAGCTATCCAAGATCCTCCAAGCCCTTTCCGACCCATAACAACATCGCACAAGAAAGAGTTTCGAATTTCTCGAGCGCGCGAGCTAGCGGTGGGGAAATTAGTAGCCGAAGGTTCTTTCGGGGAAAGTCGCTCACCGACGACGTTTTGATGCGGAGATTCGTCGTCGAAGAAGAGGCGATGATGCATGTGAGGAGGAGGAACCAAATGGAAGTTATAAGGAAGAGGAGTTTGATGAGAAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTGATAGCTGAGGAAGAACAA

Coding sequence (CDS)

AGGAAGCCATGGTATCAAAGAGCAATGGAAATAGTGGGAAGAACTCAATGGAAAACAACTCCAAAATCCAAAGAATTCACAATTCCAACTGCAAATTCTTCAAATGGGGCATTCAATTCCAAGGGAAATGAATTCCCAAGATCAATTGGTAATAACAATTCCCACAAACAACACAACAAGATGAGAAAATGCACTTCTCTCAAGATTGCAACTTCATTCACAAGAGTTTGTCTTTGTGCACCAATTTCTTCTTACAATGAAATTTTCCAAGCTGAGATTAACCCGCCCAGGCGAAGCCATAGCTATCCAAGATCCTCCAAGCCCTTTCCGACCCATAACAACATCGCACAAGAAAGAGTTTCGAATTTCTCGAGCGCGCGAGCTAGCGGTGGGGAAATTAGTAGCCGAAGGTTCTTTCGGGGAAAGTCGCTCACCGACGACGTTTTGATGCGGAGATTCGTCGTCGAAGAAGAGGCGATGATGCATGTGAGGAGGAGGAACCAAATGGAAGTTATAAGGAAGAGGAGTTTGATGAGAAGAAGGAAGAAGCTTGGACCAAGCCCTCTTAGCAAAATGGTGATAGCTGAGGAAGAACAA

Protein sequence

RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNNIAQERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQMEVIRKRSLMRRRKKLGPSPLSKMVIAEEEQ

Homology

[Close]

BLAST of MS002946 vs. NCBI nr
Match: XP_022155444.1 (uncharacterized protein LOC111022587 [Momordica charantia])

HSP 1 Score: 383.6 bits (984), Expect = 1.0e-102
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK 60
           RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK
Sbjct: 35  RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK 94

Query: 61  MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNNIAQERV 120
           MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNNIAQERV
Sbjct: 95  MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNNIAQERV 154

Query: 121 SNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQMEVIRKRSLMRR 180
           SNFSSARASGG ISSRRFFRGKSLTDDVLMRRFV+EEEAMMHVRRRNQMEVIRKRSLMRR
Sbjct: 155 SNFSSARASGGGISSRRFFRGKSLTDDVLMRRFVLEEEAMMHVRRRNQMEVIRKRSLMRR 214

Query: 181 RKKLGPSPLSKMVIAEEEQ 200
           RKKLGPSPLSKMVIAEEEQ
Sbjct: 215 RKKLGPSPLSKMVIAEEEQ 233

[Close]

BLAST of MS002946 vs. NCBI nr
Match: XP_038875352.1 (diacylglycerol kinase A [Benincasa hispida])

HSP 1 Score: 261.9 bits (668), Expect = 4.4e-66
Identity = 159/208 (76.44%), Postives = 170/208 (81.73%), Query Frame = 0


Query: 1   RKPWYQRAMEIVGRTQWKTTPKSKEFT-IPTANSSNGAFNSKGNEFPRSIGNNNS----- 60
           RKPWYQRAMEIVG TQWKT+PKS+E T IPT   +NG  NSKGNEF R   NNNS     
Sbjct: 10  RKPWYQRAMEIVG-TQWKTSPKSREMTNIPT---TNGTMNSKGNEFSRIGNNNNSNNSNN 69

Query: 61  -HKQHNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTH- 120
            + ++NKMRKCTSLKIATSFTRVCLCAPISSYNEIFQ    PPRRSHSYPR SKPFPT+ 
Sbjct: 70  INNKYNKMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPR-SKPFPTNN 129

Query: 121 -NNIAQERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQMEV 180
            N+I  ERV    +AR SG   SSRRFFRGKSLTDDVLMRRFVVEEEAMM VRRRNQMEV
Sbjct: 130 ANHITHERVL-LPTARLSGE--SSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEV 189

Query: 181 IRKRSLMRRRKKLGPSPLSKMVIAEEEQ 200
           IRKR+LM RRKKLGPSPLSKM+IAEEEQ
Sbjct: 190 IRKRNLM-RRKKLGPSPLSKMIIAEEEQ 208

[Close]

BLAST of MS002946 vs. NCBI nr
Match: XP_004140595.1 (probable myosin light chain kinase DDB_G0279831 [Cucumis sativus] >KAE8646731.1 hypothetical protein Csa_005764 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 2.2e-65
Identity = 159/211 (75.36%), Postives = 167/211 (79.15%), Query Frame = 0


Query: 1   RKPWYQRAMEIVGRTQWKTT-PKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHN 60
           RKPWYQRAMEIVG TQWKTT  K++E TI TA   NGAFNSK N    +  NNN+  ++N
Sbjct: 11  RKPWYQRAMEIVG-TQWKTTSSKAREITIATA---NGAFNSKAN----NGNNNNNSSKYN 70

Query: 61  KMRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNN----- 120
           KMRKCTSLKIATSFTRVCLCAPISSYNEIFQ    PPRRSHSYPR SKPFPT+NN     
Sbjct: 71  KMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPR-SKPFPTNNNNNNGN 130

Query: 121 ------IAQERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQ 180
                 I  ERV    SAR SG   SSRRFFRGKSLTDDVLMRRFVVEEEAMM VRRRNQ
Sbjct: 131 NTTNHIITHERVL-LPSARLSGE--SSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQ 190

Query: 181 MEVIRKRSLMRRRKKLGPSPLSKMVIAEEEQ 200
           MEVIRKR+LMRRRKKLGPSPLSKMVIAEEEQ
Sbjct: 191 MEVIRKRNLMRRRKKLGPSPLSKMVIAEEEQ 209

[Close]

BLAST of MS002946 vs. NCBI nr
Match: XP_008460010.1 (PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 1.2e-63
Identity = 153/207 (73.91%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 1   RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK 60
           RKPWYQRAMEIVG TQWKT+ KS+E TI T    NG FNSK N       N N +  +NK
Sbjct: 12  RKPWYQRAMEIVG-TQWKTSSKSREITITT---PNGTFNSKAN-------NGNKNNNNNK 71

Query: 61  MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNN------ 120
           MRKCTSLKIATSFTRVCLCAPISSYNEIFQ    PPRRSHSYPR SKPFPT++N      
Sbjct: 72  MRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPR-SKPFPTNSNNNNGNN 131

Query: 121 ---IAQERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQMEV 180
              I  ER+    SAR SG   SSRRFFRGKSLTDDVLMRRFVVEEEAMM VRRRNQMEV
Sbjct: 132 NHIITHERIL-LPSARLSGE--SSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEV 191

Query: 181 IRKRSLMRRRKKLGPSPLSKMVIAEEE 199
           IRKR+LMRRRKKLGPSPLSKMVIAEEE
Sbjct: 192 IRKRNLMRRRKKLGPSPLSKMVIAEEE 203

[Close]

BLAST of MS002946 vs. NCBI nr
Match: KAA0039919.1 (serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa] >TYK24581.1 serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 253.8 bits (647), Expect = 1.2e-63
Identity = 153/207 (73.91%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 1   RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK 60
           RKPWYQRAMEIVG TQWKT+ KS+E TI T    NG FNSK N       N N +  +NK
Sbjct: 5   RKPWYQRAMEIVG-TQWKTSSKSREITITT---PNGTFNSKAN-------NGNKNNNNNK 64

Query: 61  MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNN------ 120
           MRKCTSLKIATSFTRVCLCAPISSYNEIFQ    PPRRSHSYPR SKPFPT++N      
Sbjct: 65  MRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPR-SKPFPTNSNNNNGNN 124

Query: 121 ---IAQERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQMEV 180
              I  ER+    SAR SG   SSRRFFRGKSLTDDVLMRRFVVEEEAMM VRRRNQMEV
Sbjct: 125 NHIITHERIL-LPSARLSGE--SSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEV 184

Query: 181 IRKRSLMRRRKKLGPSPLSKMVIAEEE 199
           IRKR+LMRRRKKLGPSPLSKMVIAEEE
Sbjct: 185 IRKRNLMRRRKKLGPSPLSKMVIAEEE 196

[Close]

BLAST of MS002946 vs. ExPASy TrEMBL
Match: A0A6J1DQA6 (uncharacterized protein LOC111022587 OS=Momordica charantia OX=3673 GN=LOC111022587 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 4.9e-103
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK 60
           RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK
Sbjct: 35  RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK 94

Query: 61  MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNNIAQERV 120
           MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNNIAQERV
Sbjct: 95  MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNNIAQERV 154

Query: 121 SNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQMEVIRKRSLMRR 180
           SNFSSARASGG ISSRRFFRGKSLTDDVLMRRFV+EEEAMMHVRRRNQMEVIRKRSLMRR
Sbjct: 155 SNFSSARASGGGISSRRFFRGKSLTDDVLMRRFVLEEEAMMHVRRRNQMEVIRKRSLMRR 214

Query: 181 RKKLGPSPLSKMVIAEEEQ 200
           RKKLGPSPLSKMVIAEEEQ
Sbjct: 215 RKKLGPSPLSKMVIAEEEQ 233

[Close]

BLAST of MS002946 vs. ExPASy TrEMBL
Match: A0A0A0KBW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087190 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 159/211 (75.36%), Postives = 167/211 (79.15%), Query Frame = 0


Query: 1   RKPWYQRAMEIVGRTQWKTT-PKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHN 60
           RKPWYQRAMEIVG TQWKTT  K++E TI TA   NGAFNSK N    +  NNN+  ++N
Sbjct: 5   RKPWYQRAMEIVG-TQWKTTSSKAREITIATA---NGAFNSKAN----NGNNNNNSSKYN 64

Query: 61  KMRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNN----- 120
           KMRKCTSLKIATSFTRVCLCAPISSYNEIFQ    PPRRSHSYPR SKPFPT+NN     
Sbjct: 65  KMRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPR-SKPFPTNNNNNNGN 124

Query: 121 ------IAQERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQ 180
                 I  ERV    SAR SG   SSRRFFRGKSLTDDVLMRRFVVEEEAMM VRRRNQ
Sbjct: 125 NTTNHIITHERVL-LPSARLSGE--SSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQ 184

Query: 181 MEVIRKRSLMRRRKKLGPSPLSKMVIAEEEQ 200
           MEVIRKR+LMRRRKKLGPSPLSKMVIAEEEQ
Sbjct: 185 MEVIRKRNLMRRRKKLGPSPLSKMVIAEEEQ 203

[Close]

BLAST of MS002946 vs. ExPASy TrEMBL
Match: A0A5D3DLW3 (Serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001260 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.8e-64
Identity = 153/207 (73.91%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 1   RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK 60
           RKPWYQRAMEIVG TQWKT+ KS+E TI T    NG FNSK N       N N +  +NK
Sbjct: 5   RKPWYQRAMEIVG-TQWKTSSKSREITITT---PNGTFNSKAN-------NGNKNNNNNK 64

Query: 61  MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNN------ 120
           MRKCTSLKIATSFTRVCLCAPISSYNEIFQ    PPRRSHSYPR SKPFPT++N      
Sbjct: 65  MRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPR-SKPFPTNSNNNNGNN 124

Query: 121 ---IAQERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQMEV 180
              I  ER+    SAR SG   SSRRFFRGKSLTDDVLMRRFVVEEEAMM VRRRNQMEV
Sbjct: 125 NHIITHERIL-LPSARLSGE--SSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEV 184

Query: 181 IRKRSLMRRRKKLGPSPLSKMVIAEEE 199
           IRKR+LMRRRKKLGPSPLSKMVIAEEE
Sbjct: 185 IRKRNLMRRRKKLGPSPLSKMVIAEEE 196

[Close]

BLAST of MS002946 vs. ExPASy TrEMBL
Match: A0A1S3CBM1 (serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.8e-64
Identity = 153/207 (73.91%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 1   RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK 60
           RKPWYQRAMEIVG TQWKT+ KS+E TI T    NG FNSK N       N N +  +NK
Sbjct: 12  RKPWYQRAMEIVG-TQWKTSSKSREITITT---PNGTFNSKAN-------NGNKNNNNNK 71

Query: 61  MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNN------ 120
           MRKCTSLKIATSFTRVCLCAPISSYNEIFQ    PPRRSHSYPR SKPFPT++N      
Sbjct: 72  MRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPR-SKPFPTNSNNNNGNN 131

Query: 121 ---IAQERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQMEV 180
              I  ER+    SAR SG   SSRRFFRGKSLTDDVLMRRFVVEEEAMM VRRRNQMEV
Sbjct: 132 NHIITHERIL-LPSARLSGE--SSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEV 191

Query: 181 IRKRSLMRRRKKLGPSPLSKMVIAEEE 199
           IRKR+LMRRRKKLGPSPLSKMVIAEEE
Sbjct: 192 IRKRNLMRRRKKLGPSPLSKMVIAEEE 203

[Close]

BLAST of MS002946 vs. ExPASy TrEMBL
Match: A0A1S3CBJ3 (serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498954 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.8e-64
Identity = 153/207 (73.91%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 1   RKPWYQRAMEIVGRTQWKTTPKSKEFTIPTANSSNGAFNSKGNEFPRSIGNNNSHKQHNK 60
           RKPWYQRAMEIVG TQWKT+ KS+E TI T    NG FNSK N       N N +  +NK
Sbjct: 11  RKPWYQRAMEIVG-TQWKTSSKSREITITT---PNGTFNSKAN-------NGNKNNNNNK 70

Query: 61  MRKCTSLKIATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNN------ 120
           MRKCTSLKIATSFTRVCLCAPISSYNEIFQ    PPRRSHSYPR SKPFPT++N      
Sbjct: 71  MRKCTSLKIATSFTRVCLCAPISSYNEIFQQAEIPPRRSHSYPR-SKPFPTNSNNNNGNN 130

Query: 121 ---IAQERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVVEEEAMMHVRRRNQMEV 180
              I  ER+    SAR SG   SSRRFFRGKSLTDDVLMRRFVVEEEAMM VRRRNQMEV
Sbjct: 131 NHIITHERIL-LPSARLSGE--SSRRFFRGKSLTDDVLMRRFVVEEEAMMQVRRRNQMEV 190

Query: 181 IRKRSLMRRRKKLGPSPLSKMVIAEEE 199
           IRKR+LMRRRKKLGPSPLSKMVIAEEE
Sbjct: 191 IRKRNLMRRRKKLGPSPLSKMVIAEEE 202

[Close]

BLAST of MS002946 vs. TAIR 10
Match: AT3G59680.1 (unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 159.8 bits (403), Expect = 2.2e-39
Identity = 104/204 (50.98%), Postives = 138/204 (67.65%), Query Frame = 0


Query: 1   RKPWYQRAMEIVG-RTQWKTTPKSKEFTIPT--ANSSNGAFNSKGNEFPRSIGNNNSHKQ 60
           RKPWYQRAM +    T W+T PKS     P     S N + NSK         ++N ++ 
Sbjct: 13  RKPWYQRAMAVARFATNWRTIPKSSSQQQPENFRPSRNPSVNSK---------SSNHNQI 72

Query: 61  HNKMRKCTSLKI-ATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNNIA 120
           ++++RKC+SLK+ A SFTRVCLCAPI  Y+++F+  + PPRRS SYP  SKP P    +A
Sbjct: 73  YHQLRKCSSLKVAANSFTRVCLCAPIGPYDDVFRIHV-PPRRSSSYP-PSKPLPMETAVA 132

Query: 121 QERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVV-EEEAMMHVRRRNQMEVIRKR 180
                  ++AR S    S RR FRGKSL ++ LMRRFVV EEEA+M  R+R+QME++RKR
Sbjct: 133 ------VATARMSVD--SGRRIFRGKSLRENALMRRFVVAEEEAIMENRKRDQMEIVRKR 192

Query: 181 SLMRRRKKLGPSPLSKMVIAEEEQ 200
           + MRR+KKLGPSPLS+MVIAE+++
Sbjct: 193 NQMRRKKKLGPSPLSRMVIAEDQE 197

[Close]

BLAST of MS002946 vs. TAIR 10
Match: AT3G59680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 159.8 bits (403), Expect = 2.2e-39
Identity = 104/204 (50.98%), Postives = 138/204 (67.65%), Query Frame = 0


Query: 1   RKPWYQRAMEIVG-RTQWKTTPKSKEFTIPT--ANSSNGAFNSKGNEFPRSIGNNNSHKQ 60
           RKPWYQRAM +    T W+T PKS     P     S N + NSK         ++N ++ 
Sbjct: 41  RKPWYQRAMAVARFATNWRTIPKSSSQQQPENFRPSRNPSVNSK---------SSNHNQI 100

Query: 61  HNKMRKCTSLKI-ATSFTRVCLCAPISSYNEIFQAEINPPRRSHSYPRSSKPFPTHNNIA 120
           ++++RKC+SLK+ A SFTRVCLCAPI  Y+++F+  + PPRRS SYP  SKP P    +A
Sbjct: 101 YHQLRKCSSLKVAANSFTRVCLCAPIGPYDDVFRIHV-PPRRSSSYP-PSKPLPMETAVA 160

Query: 121 QERVSNFSSARASGGEISSRRFFRGKSLTDDVLMRRFVV-EEEAMMHVRRRNQMEVIRKR 180
                  ++AR S    S RR FRGKSL ++ LMRRFVV EEEA+M  R+R+QME++RKR
Sbjct: 161 ------VATARMSVD--SGRRIFRGKSLRENALMRRFVVAEEEAIMENRKRDQMEIVRKR 220

Query: 181 SLMRRRKKLGPSPLSKMVIAEEEQ 200
           + MRR+KKLGPSPLS+MVIAE+++
Sbjct: 221 NQMRRKKKLGPSPLSRMVIAEDQE 225

The following BLAST results are available for this feature:

BLAST of MS002946 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155444.1	1.0e-102	98.99	uncharacterized protein LOC111022587 [Momordica charantia]	[more]
XP_038875352.1	4.4e-66	76.44	diacylglycerol kinase A [Benincasa hispida]	[more]
XP_004140595.1	2.2e-65	75.36	probable myosin light chain kinase DDB_G0279831 [Cucumis sativus] >KAE8646731.1 ...	[more]
XP_008460010.1	1.2e-63	73.91	PREDICTED: serine/threonine-protein kinase pakD isoform X1 [Cucumis melo]	[more]
KAA0039919.1	1.2e-63	73.91	serine/threonine-protein kinase pakD isoform X1 [Cucumis melo var. makuwa] >TYK2...	[more]

BLAST of MS002946 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002946 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQA6	4.9e-103	98.99	uncharacterized protein LOC111022587 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A0A0KBW5	1.1e-65	75.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087190 PE=4 SV=1	[more]
A0A5D3DLW3	5.8e-64	73.91	Serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CBM1	5.8e-64	73.91	serine/threonine-protein kinase pakD isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CBJ3	5.8e-64	73.91	serine/threonine-protein kinase pakD isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MS002946 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59680.1	2.2e-39	50.98	unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bac...	[more]
AT3G59680.2	2.2e-39	50.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36772	SERINE/THREONINE-KINASE	coord: 1..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002946.1	MS002946.1	mRNA