MS002944 (gene) Bitter gourd (TR) v1

Overview


Name	MS002944
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	scaffold595_1: 230786 .. 232994 (+)
RNA-Seq Expression	MS002944
Synteny	MS002944

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGACAGACACAGCTTCTGTTCTTCTGGAGGCAATGGAATACATACAATTTCTTCATGAACAAATTAAGGTTGGCCTTTTTTTTGGGTATGTTTTCATCGAGTCTATTCAGTAAAGACAGCTGAGATATTACCTAACTTCTTGTGCTTTATGTTTTCTTCAGGTGTTGATTGCTCCATACCTTGAAAGAACACCAATGTCCAGAATACAGGTGAGCATAAAAACTTGGTTATATTTAACAATATTTATAGCACTAATGTTCATATTATTATTTTTTGCAAAGGCATTATTTTCTCTTATGACTACCATCTCACATGTATTATTGTACTTTTGGATGTAAATTTTTTTGTATGAAGTATGGGACAAAAATAGGACGCTATATATACACTACCTCGTTTTTAGATAGATGAGTCCCCTAAGAAAAGTCGTTAAATATCCCAACAACATAAGAATCGCGCACCTTCAAACTATCTTTGAAACACTACAAGAATTAAGCTTTCTCCCAACGCTAAAAAATGTTGGAAGAAACCCAAAAACAGTTGGGAGAGACTTTGCCTGATGTAATATTTGCGTCGAGACAAAAGTCGGGAAAACACATTGAGAAAAGATCTTCCGGACGGTTTTTGGACAATTGTAATGCTATATAAGCTTTGCACAACGATTAAGATACAGTCGGAGAAAAGGTATCTTTGACCGAAGGTTTTAAACCGTCGGACAAAGTAGACATTTATGAAAACAATTACTTCTATCCTATTCCTTACCGAAAGGTTTAGCTCAACCTCGAAGTTAAACTTCAGTAAGAGTAATCCCTACCAATCCAAATATTGCGTAGAGATCTTCCTTTTCACCCATATGGAAAGAATTACCACTTTCCCCATCAAAATCTTTGAATAAAGATTCTCCTTCCCTCTCTTCTTCAGCAGTGGGATTGCTAGTGTAGAATGTATTAATGTATAATGTAGGTTGAATTACCATCAACTCTCTTTTCAACATATTATAGTTAGGGGAGGGTTCTGTGTGGACGATTGCCACATTTGTTTTTCCTCGAAACCGAAAACAATAGAATCTTTCCCCCGAGGGGTAAGGGAAAACGTTCCTTGTTTTAGAAATGAAATCAGTTCGTTGTATACGACGGTATTGTAATGATTGGTTCATCCTTTTAGCGAGTTATAAGGTTGATAAAAATATTTCCCTTTTAGCTCTAGTGTCATTTTTTGCAAGTCATAAGGTTGACAAATATTTGGCTCTTGAAGAGTTCAAGGATATTCTTTGGTTCTAAATGGCATCATCTTTTATTGGATATCAAATCAATGTAAATGAGGAGAATATTGTTATCAAAAGTCAGCTTCCTTTTTTCTCATCTAATCTATTTGTTTTTGCCTACACTACTTCATTTGTCGGTTTTGTAGATGAAAAAAAATTTATCATTTATCTTGTCTAAGGGGGGAGAAATTTTGTTTGGTTCAAGTTCTGAGTACTAAAGGTCGATTCGATAACGTTGATGTTCTCTGTAAAACAAAATTGCGTTAGGTTAATTTTTTCCTTTCTTGCTCATTTTTTTTTACTGAAAAAAGAAATATAAACTTGTTTGGTAATAATTTATTATTATTTGTTCTATCTTGTTCTCTCACATTTTAAATTAAAAACAAGTAATAATTTTACCTGGAAATTAAAATTTCAAATTATATATTAAAAATATTTACTTTTTTCAATATTTATTATGCATTTTACCAGTAAAAAATGATAAAAAAATGTTTTTATCTATATTTTGAAAAATAATTGAAAATAAGAAACAATAAATATGATTTTGTTATTTCTAAAATTTCTAAATATTTTTGGAAACATTTTTTAGAAATGAGAAATGAAAAATAGTAATAGTTATCAAACGTTTATATTTCTCTTGAAAAATGAGAAACAAGAAACGAAACAGGATGAAATGAGCTCAAAAAGTCTTTTATCTCTGGACTTGAACGTAAGGTTAGTAAAAATCATTATTTAGACTCCAAAAGTTAGCCTCTCCTGACTCTATTTTAACCACTTGCTCTGTCTGTCTCTATCAGGAAATTGAGCCGTGGAGCTTGGGAAGCAATGGCTTATGTCTCGTGCCGATCGCCTCGACTAGCCGAATTGCTAGCTGCAATGGTGCAGACATCTGGGCTCCTGTCAAGACTTCTTCCTCGGACATTGAGAAGAATGTCTTGGAGTTACAA

mRNA sequence

CAGACAGACACAGCTTCTGTTCTTCTGGAGGCAATGGAATACATACAATTTCTTCATGAACAAATTAAGTTAGCCTCTCCTGACTCTATTTTAACCACTTGCTCTGTCTGTCTCTATCAGGAAATTGAGCCGTGGAGCTTGGGAAGCAATGGCTTATGTCTCGTGCCGATCGCCTCGACTAGCCGAATTGCTAGCTGCAATGGTGCAGACATCTGGGCTCCTGTCAAGACTTCTTCCTCGGACATTGAGAAGAATGTCTTGGAGTTACAA

Coding sequence (CDS)

CAGACAGACACAGCTTCTGTTCTTCTGGAGGCAATGGAATACATACAATTTCTTCATGAACAAATTAAGTTAGCCTCTCCTGACTCTATTTTAACCACTTGCTCTGTCTGTCTCTATCAGGAAATTGAGCCGTGGAGCTTGGGAAGCAATGGCTTATGTCTCGTGCCGATCGCCTCGACTAGCCGAATTGCTAGCTGCAATGGTGCAGACATCTGGGCTCCTGTCAAGACTTCTTCCTCGGACATTGAGAAGAATGTCTTGGAGTTACAA

Protein sequence

QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ

Homology

[Close]

BLAST of MS002944 vs. NCBI nr
Match: XP_022155424.1 (transcription factor bHLH154-like isoform X2 [Momordica charantia])

HSP 1 Score: 140.6 bits (353), Expect = 6.7e-30
Identity = 76/91 (83.52%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAS 60
           +TDTASVLLEAMEYIQFLHEQIK L +P   L    +   QEIEPWSLGSNGLCLVPIAS
Sbjct: 32  KTDTASVLLEAMEYIQFLHEQIKVLIAP--YLERTPMSRIQEIEPWSLGSNGLCLVPIAS 91

Query: 61  TSRIASCNGADIWAPVKTSSSDIEKNVLELQ 91
           TSRIASCNGADIWAPVKTSSSDIEKNVLELQ
Sbjct: 92  TSRIASCNGADIWAPVKTSSSDIEKNVLELQ 120

[Close]

BLAST of MS002944 vs. NCBI nr
Match: XP_022155423.1 (transcription factor bHLH153-like isoform X1 [Momordica charantia])

HSP 1 Score: 140.6 bits (353), Expect = 6.7e-30
Identity = 76/91 (83.52%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAS 60
           +TDTASVLLEAMEYIQFLHEQIK L +P   L    +   QEIEPWSLGSNGLCLVPIAS
Sbjct: 54  KTDTASVLLEAMEYIQFLHEQIKVLIAP--YLERTPMSRIQEIEPWSLGSNGLCLVPIAS 113

Query: 61  TSRIASCNGADIWAPVKTSSSDIEKNVLELQ 91
           TSRIASCNGADIWAPVKTSSSDIEKNVLELQ
Sbjct: 114 TSRIASCNGADIWAPVKTSSSDIEKNVLELQ 142

[Close]

BLAST of MS002944 vs. NCBI nr
Match: KAG6668445.1 (hypothetical protein CIPAW_01G170800 [Carya illinoinensis])

HSP 1 Score: 102.4 bits (254), Expect = 2.0e-18
Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T SV   QE+ P+SL S GLCLVP++ T
Sbjct: 29  KTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPSV--MQELGPYSLRSKGLCLVPVSCT 88

Query: 61  SRIASCNGADIWAPVKTSSSDIEKNV 87
           + +A  NGADIWAP+KT+S   EK +
Sbjct: 89  AGVARSNGADIWAPIKTTSPKFEKAI 112

[Close]

BLAST of MS002944 vs. NCBI nr
Match: XP_042941122.1 (transcription factor bHLH153 isoform X3 [Carya illinoinensis] >KAG6668447.1 hypothetical protein CIPAW_01G170800 [Carya illinoinensis])

HSP 1 Score: 102.4 bits (254), Expect = 2.0e-18
Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T SV   QE+ P+SL S GLCLVP++ T
Sbjct: 52  KTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPSV--MQELGPYSLRSKGLCLVPVSCT 111

Query: 61  SRIASCNGADIWAPVKTSSSDIEKNV 87
           + +A  NGADIWAP+KT+S   EK +
Sbjct: 112 AGVARSNGADIWAPIKTTSPKFEKAI 135

[Close]

BLAST of MS002944 vs. NCBI nr
Match: XP_042941108.1 (transcription factor bHLH153 isoform X1 [Carya illinoinensis] >KAG6668446.1 hypothetical protein CIPAW_01G170800 [Carya illinoinensis])

HSP 1 Score: 102.4 bits (254), Expect = 2.0e-18
Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T SV   QE+ P+SL S GLCLVP++ T
Sbjct: 68  KTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPSV--MQELGPYSLRSKGLCLVPVSCT 127

Query: 61  SRIASCNGADIWAPVKTSSSDIEKNV 87
           + +A  NGADIWAP+KT+S   EK +
Sbjct: 128 AGVARSNGADIWAPIKTTSPKFEKAI 151

[Close]

BLAST of MS002944 vs. ExPASy Swiss-Prot
Match: Q7XJU1 (Transcription factor bHLH154 OS=Arabidopsis thaliana OX=3702 GN=BHLH154 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-17
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLLE M+YIQFL EQ+K+ S   +  T S    +E+E +SL S GLCLVP+  T
Sbjct: 61  KTDTASVLLEGMQYIQFLQEQVKVLSAPYLQATPST-TEEEVEEYSLRSKGLCLVPLEYT 120

Query: 61  SRIASCNGADIWAPVKTSSS 81
           S +A  NGADIWAPVKT +S
Sbjct: 121 SEVAQTNGADIWAPVKTPTS 139

[Close]

BLAST of MS002944 vs. ExPASy Swiss-Prot
Match: Q7XJU2 (Transcription factor bHLH153 OS=Arabidopsis thaliana OX=3702 GN=BHLH153 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.6e-16
Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLL+AM YI+FLHEQ+K+ S    L T      +E+E +SL + GLCLVP+ +T
Sbjct: 59  KTDTASVLLDAMHYIEFLHEQVKVLSA-PYLQTVPDATQEELEQYSLRNRGLCLVPMENT 118

Query: 61  SRIASCNGADIWAPVKTSSS 81
             +A  NGADIWAPVKT  S
Sbjct: 119 VGVAQSNGADIWAPVKTPLS 137

[Close]

BLAST of MS002944 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-08
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEI----------EPWSLGSN 60
           +TDTASVL EA+EYI+FLH+Q+ + S   +    S    Q+I          E   L  +
Sbjct: 302 KTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGH 361

Query: 61  GLCLVPIASTSRIASCNGADIWAP 75
           GLCLVPI+ST  +A+   AD W P
Sbjct: 362 GLCLVPISSTFPVANETTADFWTP 385

[Close]

BLAST of MS002944 vs. ExPASy Swiss-Prot
Match: Q9LT67 (Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-08
Identity = 37/82 (45.12%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIK-LASP-------DSILTTCSVCLYQEIEPWSLGSNGL 60
           +TD ASVL EAM YI+FL +QI+ L SP       D  + T  V    + +   L S GL
Sbjct: 176 KTDAASVLHEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAK--DLRSRGL 235

Query: 61  CLVPIASTSRIASCNGADIWAP 75
           CLVP++ST  + + NGAD W+P
Sbjct: 236 CLVPVSSTVHVENSNGADFWSP 255

[Close]

BLAST of MS002944 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-06
Identity = 32/82 (39.02%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQE--------IEPWSLGSNGL 60
           +TD ASVL EA+EYI+FLH+Q+   S   + +  S+   Q          E   L S GL
Sbjct: 366 KTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHSTELEVSEEPDLRSRGL 425

Query: 61  CLVPIASTSRIASCNGADIWAP 75
           CLVP++ST  +      D W P
Sbjct: 426 CLVPVSSTFPVTHDTTVDFWTP 447

[Close]

BLAST of MS002944 vs. ExPASy TrEMBL
Match: A0A6J1DMX2 (transcription factor bHLH153-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022570 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.2e-30
Identity = 76/91 (83.52%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAS 60
           +TDTASVLLEAMEYIQFLHEQIK L +P   L    +   QEIEPWSLGSNGLCLVPIAS
Sbjct: 54  KTDTASVLLEAMEYIQFLHEQIKVLIAP--YLERTPMSRIQEIEPWSLGSNGLCLVPIAS 113

Query: 61  TSRIASCNGADIWAPVKTSSSDIEKNVLELQ 91
           TSRIASCNGADIWAPVKTSSSDIEKNVLELQ
Sbjct: 114 TSRIASCNGADIWAPVKTSSSDIEKNVLELQ 142

[Close]

BLAST of MS002944 vs. ExPASy TrEMBL
Match: A0A6J1DQ86 (transcription factor bHLH154-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022570 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.2e-30
Identity = 76/91 (83.52%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAS 60
           +TDTASVLLEAMEYIQFLHEQIK L +P   L    +   QEIEPWSLGSNGLCLVPIAS
Sbjct: 32  KTDTASVLLEAMEYIQFLHEQIKVLIAP--YLERTPMSRIQEIEPWSLGSNGLCLVPIAS 91

Query: 61  TSRIASCNGADIWAPVKTSSSDIEKNVLELQ 91
           TSRIASCNGADIWAPVKTSSSDIEKNVLELQ
Sbjct: 92  TSRIASCNGADIWAPVKTSSSDIEKNVLELQ 120

[Close]

BLAST of MS002944 vs. ExPASy TrEMBL
Match: A0A2I4H839 (transcription factor bHLH153-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109014342 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-18
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T SV   QE+ P+SL S GLCLVP++ T
Sbjct: 68  KTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPSV--MQELGPYSLRSKGLCLVPVSCT 127

Query: 61  SRIASCNGADIWAPVKTSSSDIEK 85
           + +A  NGADIWAP+KT+S   EK
Sbjct: 128 AGVARSNGADIWAPIKTTSPKFEK 149

[Close]

BLAST of MS002944 vs. ExPASy TrEMBL
Match: A0A2I4H844 (transcription factor bHLH153-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109014342 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-18
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T SV   QE+ P+SL S GLCLVP++ T
Sbjct: 52  KTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPSV--MQELGPYSLRSKGLCLVPVSCT 111

Query: 61  SRIASCNGADIWAPVKTSSSDIEK 85
           + +A  NGADIWAP+KT+S   EK
Sbjct: 112 AGVARSNGADIWAPIKTTSPKFEK 133

[Close]

BLAST of MS002944 vs. ExPASy TrEMBL
Match: A0A5D3CZQ3 (Transcription factor bHLH113-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001780 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.9e-18
Identity = 55/88 (62.50%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEP--WSLGSNGLCLVPIA 60
           +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T +V L QE+EP   SL S GLCLVPI+
Sbjct: 60  KTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTV-LLQEVEPCSHSLRSRGLCLVPIS 119

Query: 61  STSRIASCNGADIWAPVKTSSSDIEKNV 87
            T+ +A  NGADIWAPVKT S   EK++
Sbjct: 120 CTAGVARSNGADIWAPVKTISPKFEKHI 146

[Close]

BLAST of MS002944 vs. TAIR 10
Match: AT2G31730.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 9.7e-19
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLLE M+YIQFL EQ+K+ S   +  T S    +E+E +SL S GLCLVP+  T
Sbjct: 61  KTDTASVLLEGMQYIQFLQEQVKVLSAPYLQATPST-TEEEVEEYSLRSKGLCLVPLEYT 120

Query: 61  SRIASCNGADIWAPVKTSSS 81
           S +A  NGADIWAPVKT +S
Sbjct: 121 SEVAQTNGADIWAPVKTPTS 139

[Close]

BLAST of MS002944 vs. TAIR 10
Match: AT1G05710.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 1.8e-17
Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLL+AM YI+FLHEQ+K+ S    L T      +E+E +SL + GLCLVP+ +T
Sbjct: 59  KTDTASVLLDAMHYIEFLHEQVKVLSA-PYLQTVPDATQEELEQYSLRNRGLCLVPMENT 118

Query: 61  SRIASCNGADIWAPVKTSSS 81
             +A  NGADIWAPVKT  S
Sbjct: 119 VGVAQSNGADIWAPVKTPLS 137

[Close]

BLAST of MS002944 vs. TAIR 10
Match: AT1G05710.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 1.8e-17
Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLL+AM YI+FLHEQ+K+ S    L T      +E+E +SL + GLCLVP+ +T
Sbjct: 59  KTDTASVLLDAMHYIEFLHEQVKVLSA-PYLQTVPDATQEELEQYSLRNRGLCLVPMENT 118

Query: 61  SRIASCNGADIWAPVKTSSS 81
             +A  NGADIWAPVKT  S
Sbjct: 119 VGVAQSNGADIWAPVKTPLS 137

[Close]

BLAST of MS002944 vs. TAIR 10
Match: AT1G05710.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 1.8e-17
Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLL+AM YI+FLHEQ+K+ S    L T      +E+E +SL + GLCLVP+ +T
Sbjct: 59  KTDTASVLLDAMHYIEFLHEQVKVLSA-PYLQTVPDATQEELEQYSLRNRGLCLVPMENT 118

Query: 61  SRIASCNGADIWAPVKTSSS 81
             +A  NGADIWAPVKT  S
Sbjct: 119 VGVAQSNGADIWAPVKTPLS 137

[Close]

BLAST of MS002944 vs. TAIR 10
Match: AT1G05710.5 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 1.8e-17
Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 1   QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIAST 60
           +TDTASVLL+AM YI+FLHEQ+K+ S    L T      +E+E +SL + GLCLVP+ +T
Sbjct: 59  KTDTASVLLDAMHYIEFLHEQVKVLSA-PYLQTVPDATQEELEQYSLRNRGLCLVPMENT 118

Query: 61  SRIASCNGADIWAPVKTSSS 81
             +A  NGADIWAPVKT  S
Sbjct: 119 VGVAQSNGADIWAPVKTPLS 137

The following BLAST results are available for this feature:

BLAST of MS002944 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155424.1	6.7e-30	83.52	transcription factor bHLH154-like isoform X2 [Momordica charantia]	[more]
XP_022155423.1	6.7e-30	83.52	transcription factor bHLH153-like isoform X1 [Momordica charantia]	[more]
KAG6668445.1	2.0e-18	60.47	hypothetical protein CIPAW_01G170800 [Carya illinoinensis]	[more]
XP_042941122.1	2.0e-18	60.47	transcription factor bHLH153 isoform X3 [Carya illinoinensis] >KAG6668447.1 hypo...	[more]
XP_042941108.1	2.0e-18	60.47	transcription factor bHLH153 isoform X1 [Carya illinoinensis] >KAG6668446.1 hypo...	[more]

BLAST of MS002944 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XJU1	1.4e-17	58.75	Transcription factor bHLH154 OS=Arabidopsis thaliana OX=3702 GN=BHLH154 PE=1 SV=...	[more]
Q7XJU2	2.6e-16	56.25	Transcription factor bHLH153 OS=Arabidopsis thaliana OX=3702 GN=BHLH153 PE=1 SV=...	[more]
Q94JL3	2.0e-08	42.86	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q9LT67	2.6e-08	45.12	Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=...	[more]
Q8GXT3	1.4e-06	39.02	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]

BLAST of MS002944 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMX2	3.2e-30	83.52	transcription factor bHLH153-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1DQ86	3.2e-30	83.52	transcription factor bHLH154-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A2I4H839	1.3e-18	61.90	transcription factor bHLH153-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109...	[more]
A0A2I4H844	1.3e-18	61.90	transcription factor bHLH153-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109...	[more]
A0A5D3CZQ3	4.9e-18	62.50	Transcription factor bHLH113-like isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of MS002944 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31730.1	9.7e-19	58.75	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05710.1	1.8e-17	56.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05710.4	1.8e-17	56.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05710.3	1.8e-17	56.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05710.5	1.8e-17	56.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR16223:SF224	TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1	coord: 1..74
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 1..74
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 1..23 e-value: 5.22875E-9 score: 45.6352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002944.1	MS002944.1	mRNA