MS002895 (gene) Bitter gourd (TR) v1

Overview


Name	MS002895
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	leucine-rich repeat extensin-like protein 3
Location	scaffold359: 514335 .. 515134 (-)
RNA-Seq Expression	MS002895
Synteny	MS002895

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTGTACTTACAGTCGAAGGATGCTATCATGGTGCTGACAGTGGATTTGCAGTGCCATCGATGCTATAATAAAGTCAGGAAAGTTCTCTCCAAATTCCATCGTGAGTTTTTTTTTCTTCCCTTATTCTTCTATGGTAATGTTCTCTTTACTTATTATTCTCGTCTCGTGTCGAGATACAGTTCTATTCTCCTTTATTGAAAAGTATGTTGAAACGGAAAGGAGAAATGAAAACGTGTTTTTGAGCCGCAGAAATTCGAGACCGGATTTATGATGAAAAATTGAACGCTGTGATTATCAAAGTGGTTTGTTGCAATCCTGAGAAGTTGAGAGATAATATTTGCTGCAAAGGGCGTGGGGTTATTAAGAGCATTGAGATCAAAGAGCCTGAAAAACCCAAGCCCCCTCCGCAAAAACAGACCGATCCTCCGCCGGCGAGATCAAAAGACTCTCCTCCGGCAGCGAAACCCGCCAACCCTACGAAGCAAAAACACCCACAAACTCCGGCGGGGAAGCCAGCGGCTGCACTAACACCGGCTCCGCCCCAGATTCTCACTCCGGTCCAATCCGACCCGGTTCTCGGGTACCCGCTGACGTACCCGTTTGGGACGGGCTGTAGACGGTGCTACGAAGGGATTGGTTGCGGCCCATGTTATCAAGGGTACGGTAGGCCCGGCCCATGTTGTGATGGCTGCGCTTCTGGAAGGCCCATTTACAACAGTTGCGGCGGAGGGGGGCCCTGTTACGTCAGCTACTCTGAGCATCTTAATGAAAAAAATGCAGCTGGATGCAGTGTCATG

mRNA sequence

TTGGTGTACTTACAGTCGAAGGATGCTATCATGGTGCTGACAGTGGATTTGCAGTGCCATCGATGCTATAATAAAGTCAGGAAAGTTCTCTCCAAATTCCATCAAATTCGAGACCGGATTTATGATGAAAAATTGAACGCTGTGATTATCAAAGTGGTTTGTTGCAATCCTGAGAAGTTGAGAGATAATATTTGCTGCAAAGGGCGTGGGGTTATTAAGAGCATTGAGATCAAAGAGCCTGAAAAACCCAAGCCCCCTCCGCAAAAACAGACCGATCCTCCGCCGGCGAGATCAAAAGACTCTCCTCCGGCAGCGAAACCCGCCAACCCTACGAAGCAAAAACACCCACAAACTCCGGCGGGGAAGCCAGCGGCTGCACTAACACCGGCTCCGCCCCAGATTCTCACTCCGGTCCAATCCGACCCGGTTCTCGGGTACCCGCTGACGTACCCGTTTGGGACGGGCTGTAGACGGTGCTACGAAGGGATTGGTTGCGGCCCATGTTATCAAGGGTACGGTAGGCCCGGCCCATGTTGTGATGGCTGCGCTTCTGGAAGGCCCATTTACAACAGTTGCGGCGGAGGGGGGCCCTGTTACGTCAGCTACTCTGAGCATCTTAATGAAAAAAATGCAGCTGGATGCAGTGTCATG

Coding sequence (CDS)

TTGGTGTACTTACAGTCGAAGGATGCTATCATGGTGCTGACAGTGGATTTGCAGTGCCATCGATGCTATAATAAAGTCAGGAAAGTTCTCTCCAAATTCCATCAAATTCGAGACCGGATTTATGATGAAAAATTGAACGCTGTGATTATCAAAGTGGTTTGTTGCAATCCTGAGAAGTTGAGAGATAATATTTGCTGCAAAGGGCGTGGGGTTATTAAGAGCATTGAGATCAAAGAGCCTGAAAAACCCAAGCCCCCTCCGCAAAAACAGACCGATCCTCCGCCGGCGAGATCAAAAGACTCTCCTCCGGCAGCGAAACCCGCCAACCCTACGAAGCAAAAACACCCACAAACTCCGGCGGGGAAGCCAGCGGCTGCACTAACACCGGCTCCGCCCCAGATTCTCACTCCGGTCCAATCCGACCCGGTTCTCGGGTACCCGCTGACGTACCCGTTTGGGACGGGCTGTAGACGGTGCTACGAAGGGATTGGTTGCGGCCCATGTTATCAAGGGTACGGTAGGCCCGGCCCATGTTGTGATGGCTGCGCTTCTGGAAGGCCCATTTACAACAGTTGCGGCGGAGGGGGGCCCTGTTACGTCAGCTACTCTGAGCATCTTAATGAAAAAAATGCAGCTGGATGCAGTGTCATG

Protein sequence

LVYLQSKDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNICCKGRGVIKSIEIKEPEKPKPPPQKQTDPPPARSKDSPPAAKPANPTKQKHPQTPAGKPAAALTPAPPQILTPVQSDPVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCASGRPIYNSCGGGGPCYVSYSEHLNEKNAAGCSVM

Homology

[Close]

BLAST of MS002895 vs. NCBI nr
Match: XP_022142410.1 (protein PYRICULARIA ORYZAE RESISTANCE 21 [Momordica charantia])

HSP 1 Score: 433.3 bits (1113), Expect = 1.2e-117
Identity = 209/213 (98.12%), Postives = 210/213 (98.59%), Query Frame = 0


Query: 5   QSKDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNI 64
           +SKDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNI
Sbjct: 6   KSKDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNI 65

Query: 65  CCKGRGVIKSIEIKEPEKPKPPPQKQTDPPPARSKDSPPAAKPANPTKQKHPQTPAGKPA 124
           CCKGRGVIKSIEIKEPEKPKPPPQKQTDPPP RSKDSPPAAKPANPTKQKHPQ PAGKPA
Sbjct: 66  CCKGRGVIKSIEIKEPEKPKPPPQKQTDPPPERSKDSPPAAKPANPTKQKHPQPPAGKPA 125

Query: 125 AALTPAPPQILTPVQSDPVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCAS 184
           AALTPAPPQILTPVQSDPVLGYPL YPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCAS
Sbjct: 126 AALTPAPPQILTPVQSDPVLGYPLAYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCAS 185

Query: 185 GRPIYNSCGGGGPCYVSYSEHLNEKNAAGCSVM 218
           GRPIYNSCGGGGPCYVSYSEHLNEKNAAGCSVM
Sbjct: 186 GRPIYNSCGGGGPCYVSYSEHLNEKNAAGCSVM 218

[Close]

BLAST of MS002895 vs. NCBI nr
Match: KAG6583723.1 (hypothetical protein SDJN03_19655, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 245.7 bits (626), Expect = 3.6e-61
Identity = 142/269 (52.79%), Postives = 159/269 (59.11%), Query Frame = 0


Query: 7   KDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNICC 66
           K  +M+L VDLQC RCY KV+KVL KF QIRD+IYDEK N VIIKVVCCNPEKLRD ICC
Sbjct: 6   KTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 65

Query: 67  KGRGVIKSIEIK-----EPEKPKPPPQKQTDPPPARSKDSPPAAKP-------------- 126
           KG GVIKSIEIK      P+KP PPP K+ DPPP +  D PP AKP              
Sbjct: 66  KGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKADPPPPK 125

Query: 127 -----------------------ANPTKQKHPQTPAGK-----PAAALTPAPPQILTPVQ 186
                                  A+P   K    P  K     PA    P PP+ + PV 
Sbjct: 126 ADPPPPKKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVP 185

Query: 187 SD-----------PVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCASGRPI 218
                        PV GYP  YP G  C +CYEG G GPCY G+GRPGPCCDGCASGRPI
Sbjct: 186 PAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPI 245

[Close]

BLAST of MS002895 vs. NCBI nr
Match: XP_023542911.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-60
Identity = 139/247 (56.28%), Postives = 157/247 (63.56%), Query Frame = 0


Query: 3   YLQSKDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRD 62
           ++  K  +M+L VDLQCHRCY KV+KVL KF QIRD+IYDEK N VIIKVVCCNPEKLRD
Sbjct: 12  WVLQKVVLMMLKVDLQCHRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRD 71

Query: 63  NICCKGRGVIKSIEIKEPEKPK----PPPQKQTDPPPARSKDSPPAAKPANPTKQKHPQT 122
            ICCKG GVIKSI+I++PE PK    PPPQK TD PP +  D PP  K  +P   K P  
Sbjct: 72  KICCKGCGVIKSIQIQDPEIPKPVDPPPPQKVTDSPPPKKPDPPPPQKVIDPPPPKKPDP 131

Query: 123 P----------AGKPAAALTPAPP----------QILTPVQSD--------PVLGYPLTY 182
           P            K A    PAPP          Q   PVQ+         PV GYP  Y
Sbjct: 132 PPPQKVVDPPAPPKKADPPPPAPPKKVDPPPVVVQNPPPVQAKPVPRNTCVPVAGYPPAY 191

Query: 183 PFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCASGRPIYNSCGGGGPCYVSYSEHLNEKN 218
           P G  CR CYEG G GPCY G+GRP  CC+GCASGRPIY+S GGG  CY+S  E+LNE+N
Sbjct: 192 PMGVCCRECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYISPCEYLNEEN 251

[Close]

BLAST of MS002895 vs. NCBI nr
Match: XP_004139513.2 (circumsporozoite protein [Cucumis sativus] >KAE8652830.1 hypothetical protein Csa_022772 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 1.4e-60
Identity = 144/288 (50.00%), Postives = 160/288 (55.56%), Query Frame = 0


Query: 7   KDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNICC 66
           K  +M+L VDLQC RCY KV+KVL KF QIRD+IYDEK N VIIKVVCCNPEKLRD ICC
Sbjct: 7   KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 66

Query: 67  KGRGVIKSIEIKEPEKPKPPPQKQTDPPPARSKDSPPAAKPANPTKQKHPQTPAGK---- 126
           KG GVIKSIEIKEPE PKPPP K  DPPP +  D PP+ KP  P  QK    P  K    
Sbjct: 67  KGCGVIKSIEIKEPEPPKPPPPKPADPPPPKKVDPPPSKKPDPPPPQKVDPPPPKKADPP 126

Query: 127 ---------PAAALTPAPPQ---------------------------------------- 186
                    P+ A  P PPQ                                        
Sbjct: 127 PPKKADTPPPSKAADPPPPQKAADPPPPKKADPPPPKKADPPPPKKVDPPPPKANPPPPK 186

Query: 187 ----------------ILTPVQSD--------PVLGYPLTYPFGTGCRRCYEGIGCGPCY 218
                           I  PVQ +        PV GYP  YP G  CR+C+EG G GPCY
Sbjct: 187 KVDPPPVVVPQPTPVPIPVPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCHEGRGGGPCY 246

[Close]

BLAST of MS002895 vs. NCBI nr
Match: KAG6573522.1 (hypothetical protein SDJN03_27409, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.8 bits (621), Expect = 1.4e-60
Identity = 137/240 (57.08%), Postives = 155/240 (64.58%), Query Frame = 0


Query: 7   KDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNICC 66
           K  IM+L VDLQCHRCY KV+KV+ KF QIRD+IYDEK N VIIKVVCCNPEKLRD ICC
Sbjct: 6   KVVIMILKVDLQCHRCYKKVKKVICKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 65

Query: 67  KGRGVIKSIEIKEPEKPK----PPPQKQTDPPPARSKDSPPAAKPANPTKQK-------- 126
           KG GVIKSI+I++PE PK    PPP+K   PPP +  DSPP  KP  P  QK        
Sbjct: 66  KGCGVIKSIQIQDPEIPKPVDPPPPKKVDPPPPQKVIDSPPPKKPDPPPPQKVIDPPPPK 125

Query: 127 -----HPQTPAGKPAAALTPAPPQILT----PVQSD--------PVLGYPLTYPFGTGCR 186
                 PQ     PA      PP ++     PVQ+         PV GYP  YP G  CR
Sbjct: 126 KPDPPPPQKVVDPPAPPKKADPPPVVVQNPPPVQAKPVPRNTCVPVAGYPPAYPMGVCCR 185

Query: 187 RCYEGIGCGPCYQGYGRPGPCCDGCASGRPIYNSCGGGGPCYVSYSEHLNEKNAAGCSVM 218
            CYEG G GPCY G+GRP  CC+GCASGRPIY+S GGG  CY+S  E+LNE+NA GCSVM
Sbjct: 186 ECYEGRGGGPCYSGFGRPRSCCEGCASGRPIYDSYGGGRSCYISPCEYLNEENATGCSVM 245

[Close]

BLAST of MS002895 vs. ExPASy TrEMBL
Match: A0A6J1CKV6 (protein PYRICULARIA ORYZAE RESISTANCE 21 OS=Momordica charantia OX=3673 GN=LOC111012549 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 5.8e-118
Identity = 209/213 (98.12%), Postives = 210/213 (98.59%), Query Frame = 0


Query: 5   QSKDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNI 64
           +SKDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNI
Sbjct: 6   KSKDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNI 65

Query: 65  CCKGRGVIKSIEIKEPEKPKPPPQKQTDPPPARSKDSPPAAKPANPTKQKHPQTPAGKPA 124
           CCKGRGVIKSIEIKEPEKPKPPPQKQTDPPP RSKDSPPAAKPANPTKQKHPQ PAGKPA
Sbjct: 66  CCKGRGVIKSIEIKEPEKPKPPPQKQTDPPPERSKDSPPAAKPANPTKQKHPQPPAGKPA 125

Query: 125 AALTPAPPQILTPVQSDPVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCAS 184
           AALTPAPPQILTPVQSDPVLGYPL YPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCAS
Sbjct: 126 AALTPAPPQILTPVQSDPVLGYPLAYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCAS 185

Query: 185 GRPIYNSCGGGGPCYVSYSEHLNEKNAAGCSVM 218
           GRPIYNSCGGGGPCYVSYSEHLNEKNAAGCSVM
Sbjct: 186 GRPIYNSCGGGGPCYVSYSEHLNEKNAAGCSVM 218

[Close]

BLAST of MS002895 vs. ExPASy TrEMBL
Match: A0A0A0LTA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172590 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 7.7e-62
Identity = 144/280 (51.43%), Postives = 160/280 (57.14%), Query Frame = 0


Query: 7   KDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNICC 66
           K  +M+L VDLQC RCY KV+KVL KF QIRD+IYDEK N VIIKVVCCNPEKLRD ICC
Sbjct: 7   KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 66

Query: 67  KGRGVIKSIEIKEPEKPKPPPQKQTDPPPARSKDSPPAAKPANPTKQKHPQTPAGK---- 126
           KG GVIKSIEIKEPE PKPPP K  DPPP +  D PP+ KP  P  QK    P  K    
Sbjct: 67  KGCGVIKSIEIKEPEPPKPPPPKPADPPPPKKVDPPPSKKPDPPPPQKVDPPPPKKADPP 126

Query: 127 ---------PAAALTPAPPQ---------------------------------------- 186
                    P+ A  P PPQ                                        
Sbjct: 127 PPKKADTPPPSKAADPPPPQKAADPPPPKKADPPPPKKVDPPPPKANPPPPKKVDPPPVV 186

Query: 187 --------ILTPVQSD--------PVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGP 218
                   I  PVQ +        PV GYP  YP G  CR+C+EG G GPCY G+G PGP
Sbjct: 187 VPQPTPVPIPVPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCHEGRGGGPCYSGFGGPGP 246

[Close]

BLAST of MS002895 vs. ExPASy TrEMBL
Match: A0A6J1ELG0 (leucine-rich repeat extensin-like protein 3 isoform X12 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.1e-60
Identity = 140/260 (53.85%), Postives = 156/260 (60.00%), Query Frame = 0


Query: 7   KDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNICC 66
           K  +M+L VDLQC RCY KV+KVL KF QIRD+IYDEK N VIIKVVCCNPEKLRD ICC
Sbjct: 6   KTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 65

Query: 67  KGRGVIKSIEIK-----EPEKPKPPPQKQTDPPPARSKDSPPAAK--------------- 126
           KG GVIKSIEIK      P+KP PPP K+ DPPP    D PP  K               
Sbjct: 66  KGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADPPPPKK 125

Query: 127 ------PANPTKQKHPQTPAGK------------PAAALTPAPPQILTPVQSD------- 186
                  A+P   K    P  K            PA    P PP+ + PV          
Sbjct: 126 ADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPV 185

Query: 187 ----PVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCASGRPIYNSCGGGGP 218
               PV GYP  YP G  C +CYEG G GPCY G+GRPGPCCDGCASGRPIY+S GGG P
Sbjct: 186 NICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRP 245

[Close]

BLAST of MS002895 vs. ExPASy TrEMBL
Match: A0A6J1IAN1 (leucine-rich repeat extensin-like protein 3 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111471668 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 7.3e-60
Identity = 142/267 (53.18%), Postives = 159/267 (59.55%), Query Frame = 0


Query: 7   KDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNICC 66
           K  +M+L VDLQC RCY KV+KVL KF QIRD+IYDEK N VIIKVVCCNPEKLRD ICC
Sbjct: 6   KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 65

Query: 67  KGRGVIKSIEIK-----EPEKPKPPPQKQTDPPPAR------------------------ 126
           KG GVIKSIEIK      P+KP PPP K+ DPPPA+                        
Sbjct: 66  KGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPPPPKKA 125

Query: 127 ------------SKDSPPAAKPANPTKQKHPQTPAGK----PAAALTPAPPQ---ILTPV 186
                        K  PP  K A+P   K    P  K    P A   P PP+    L P 
Sbjct: 126 DAPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPAKADPPPPKKVDPLPPA 185

Query: 187 QSD--------PVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCASGRPIYN 218
           Q +        PV GYP  YP G  C +CYEG G GPCY G+GRPGPCCDGCASGRPIY+
Sbjct: 186 QPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYD 245

[Close]

BLAST of MS002895 vs. ExPASy TrEMBL
Match: A0A6J1EPF0 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 9.5e-60
Identity = 140/269 (52.04%), Postives = 157/269 (58.36%), Query Frame = 0


Query: 7   KDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNICC 66
           K  +M+L VDLQC RCY KV+KVL KF QIRD+IYDEK N VIIKVVCCNPEKLRD ICC
Sbjct: 6   KTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICC 65

Query: 67  KGRGVIKSIEIK---------------------EPEKPKPPPQKQTDPPPARS------- 126
           KG GVIKSIEIK                      P KP PPP K+ DPPP ++       
Sbjct: 66  KGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADPPPPKK 125

Query: 127 --------------KDSPPAAKPANPTKQKHPQTPAGK-----PAAALTPAPPQILTPVQ 186
                         K  PP  K A+P   K    P  K     PA    P PP+ + PV 
Sbjct: 126 ADPPPPKADPPPPKKADPPPPKKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVP 185

Query: 187 SD-----------PVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCASGRPI 218
                        PV GYP  YP G  C +CYEG G GPCY G+GRPGPCCDGCASGRPI
Sbjct: 186 PAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPI 245

[Close]

BLAST of MS002895 vs. TAIR 10
Match: AT4G16380.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 5.2e-34
Identity = 103/258 (39.92%), Postives = 132/258 (51.16%), Query Frame = 0


Query: 5   QSKDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNI 64
           + K  +M L VDL C +CY KV+KVL KF QIRD+++DEK N VIIKVVCC+PE++ D +
Sbjct: 6   KEKVTMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPERIMDKL 65

Query: 65  CCKGRGVIKSIEIKEPEKPKPPPQKQTDPPPARSKDSPPAA------------------- 124
           C KG G IK+IEI EP K   PPQ Q   PP + KD+ P A                   
Sbjct: 66  CSKGGGSIKTIEIVEPPK---PPQPQPQQPPQKPKDAQPKAPEKPKEPEKPKQPEKLKEP 125

Query: 125 -KPANPTKQKHPQ-----------------TPAGKPAAALTPAPPQILTPVQSDPVLGYP 184
            KP  P K K P+                  PA  PA A  PAP Q   P Q+ P++  P
Sbjct: 126 EKPKQPEKPKEPEKTKQPAPAPAPAPAPAAKPAPAPAPAPAPAPKQPGPPPQAIPMM--P 185

Query: 185 LTYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCASGRPIYNSCGGGGP--------CY 218
              P    C   Y+G G GP + GYG P    +    GRP+Y S GGG P        C+
Sbjct: 186 QGQP-AMCCGPYYDGYG-GPAFNGYGMPPQPYE--CYGRPVYESWGGGCPPPPPAYRQCH 245

[Close]

BLAST of MS002895 vs. TAIR 10
Match: AT4G16380.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-24
Identity = 86/228 (37.72%), Postives = 112/228 (49.12%), Query Frame = 0


Query: 35  QIRDRIYDEKLNAVIIKVVCCNPEKLRDNICCKGRGVIKSIEIKEPEKPKPPPQKQTDPP 94
           +IRD+++DEK N VIIKVVCC+PE++ D +C KG G IK+IEI EP K   PPQ Q   P
Sbjct: 15  EIRDQLFDEKSNIVIIKVVCCSPERIMDKLCSKGGGSIKTIEIVEPPK---PPQPQPQQP 74

Query: 95  PARSKDSPPAA--------------------KPANPTKQKHPQ----------------- 154
           P + KD+ P A                    KP  P K K P+                 
Sbjct: 75  PQKPKDAQPKAPEKPKEPEKPKQPEKLKEPEKPKQPEKPKEPEKTKQPAPAPAPAPAPAA 134

Query: 155 TPAGKPAAALTPAPPQILTPVQSDPVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGP 214
            PA  PA A  PAP Q   P Q+ P++  P   P    C   Y+G G GP + GYG P  
Sbjct: 135 KPAPAPAPAPAPAPKQPGPPPQAIPMM--PQGQP-AMCCGPYYDGYG-GPAFNGYGMPPQ 194

Query: 215 CCDGCASGRPIYNSCGGGGP--------CYVSYSEHLNEKNAAGCSVM 218
             +    GRP+Y S GGG P        C+V+  ++ +E+N   CS+M
Sbjct: 195 PYE--CYGRPVYESWGGGCPPPPPAYRQCHVTRCDYFSEENPQSCSIM 233

[Close]

BLAST of MS002895 vs. TAIR 10
Match: AT1G51090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 9.1e-23
Identity = 82/214 (38.32%), Postives = 104/214 (48.60%), Query Frame = 0


Query: 4   LQSKDAIMVLTVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDN 63
           +  K  +M L VDL C +CY KV+K + KF QI D ++DEK N +IIKVVC +PE+L + 
Sbjct: 1   MAEKVVMMKLKVDLNCSKCYKKVKKAIRKFPQITDELFDEKSNTIIIKVVCYDPERLMNK 60

Query: 64  ICCKGRGVIKSIEIKEPEKPKPPPQKQTDPPPARSKDSPPAAKPANPTKQKHPQTPAGKP 123
           +C KG G IKSI I EP K   PPQ Q  PP    K + PA  PA        Q P    
Sbjct: 61  LCYKGDGSIKSIVILEPPK---PPQPQPQPP---QKPTAPAPAPA------QAQAP---- 120

Query: 124 AAALTPAPPQILTPVQSDPVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCA 183
            A + PAP  +L  V S      P+  P+            CGP Y+             
Sbjct: 121 -ALVRPAPVPVL--VSSSAPQPMPMWQPY-----------HCGPYYEAQQYQ-------C 171

Query: 184 SGRPIYNSCGGGGPCYVSYSEHLNEKNAAGCSVM 218
            GRP+Y S GGG  C         + N+ GCS+M
Sbjct: 181 YGRPVYESWGGGRQCC------HEDMNSQGCSIM 171

[Close]

BLAST of MS002895 vs. TAIR 10
Match: AT1G49420.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-15
Identity = 70/205 (34.15%), Postives = 98/205 (47.80%), Query Frame = 0


Query: 14  TVDLQCHRCYNKVRKVLSKFHQIRDRIYDEKLNAVIIKVVCCNPEKLRDNICCKGRGVIK 73
           T  L   + ++KV+K LS   Q+RD+ ++E+ N V IKVVCC+PEK+ D +C KGRG IK
Sbjct: 16  TEPLSNEKNFSKVKKALSSIPQVRDQKFEEETNTVTIKVVCCSPEKVMDKLCSKGRGAIK 75

Query: 74  SIEIKEPEKPKPPPQKQTDPPPARSKDSPPAAKPANPTKQKHPQTPAGKPAAALTPAPPQ 133
            IE  +P K      K+ + P         A KP  P K K    PA  PA    P+  +
Sbjct: 76  LIETIDPAKHVAQKPKEPEKP-------KEAEKPKEPEKPK----PAAAPAQG-DPSSQR 135

Query: 134 ILTPVQSDPVLGYPLTYPFGTGCRRCYEGIGCGPCYQGYGRPGPCCDGCASGRPIYNSCG 193
           +       P++G+P+ +               GP Y G+ RP    +     RPIYNS G
Sbjct: 136 VTHGYNPPPMMGHPVPW-------------SDGPNY-GWSRPNGYDE-----RPIYNSYG 189

Query: 194 GGGPCYVSYSEHLN-EKNAAGCSVM 218
           G  P    Y    + E+    CS+M
Sbjct: 196 GWQPPPSQYGGRSHYEEEQPSCSIM 189

The following BLAST results are available for this feature:

BLAST of MS002895 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142410.1	1.2e-117	98.12	protein PYRICULARIA ORYZAE RESISTANCE 21 [Momordica charantia]	[more]
KAG6583723.1	3.6e-61	52.79	hypothetical protein SDJN03_19655, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023542911.1	1.0e-60	56.28	leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_004139513.2	1.4e-60	50.00	circumsporozoite protein [Cucumis sativus] >KAE8652830.1 hypothetical protein Cs...	[more]
KAG6573522.1	1.4e-60	57.08	hypothetical protein SDJN03_27409, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS002895 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002895 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKV6	5.8e-118	98.12	protein PYRICULARIA ORYZAE RESISTANCE 21 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A0A0LTA1	7.7e-62	51.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172590 PE=4 SV=1	[more]
A0A6J1ELG0	1.1e-60	53.85	leucine-rich repeat extensin-like protein 3 isoform X12 OS=Cucurbita moschata OX...	[more]
A0A6J1IAN1	7.3e-60	53.18	leucine-rich repeat extensin-like protein 3 isoform X4 OS=Cucurbita maxima OX=36...	[more]
A0A6J1EPF0	9.5e-60	52.04	protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 OS=Cucurbita moschata ...	[more]

BLAST of MS002895 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16380.1	5.2e-34	39.92	Heavy metal transport/detoxification superfamily protein	[more]
AT4G16380.2	2.2e-24	37.72	Heavy metal transport/detoxification superfamily protein	[more]
AT1G51090.1	9.1e-23	38.32	Heavy metal transport/detoxification superfamily protein	[more]
AT1G49420.1	4.1e-15	34.15	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..101
None	No IPR available	PANTHER	PTHR47488:SF16	HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN	coord: 6..217
IPR044169	Protein PYRICULARIA ORYZAE RESISTANCE 21	PANTHER	PTHR47488	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 6..217
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 11..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002895.1	MS002895.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900150	regulation of defense response to fungus
molecular_function	GO:0046872	metal ion binding